2019-06-30T10:38:15 Created temporary directory: /tmp/pip-ephem-wheel-cache-88cphie8
2019-06-30T10:38:15 Created temporary directory: /tmp/pip-req-tracker-08a2ae9y
2019-06-30T10:38:15 Created requirements tracker '/tmp/pip-req-tracker-08a2ae9y'
2019-06-30T10:38:15 Created temporary directory: /tmp/pip-wheel-g3zear5t
2019-06-30T10:38:15 Collecting clustalo==0.1.1
2019-06-30T10:38:15   1 location(s) to search for versions of clustalo:
2019-06-30T10:38:15   * https://pypi.org/simple/clustalo/
2019-06-30T10:38:15   Getting page https://pypi.org/simple/clustalo/
2019-06-30T10:38:15   Analyzing links from page https://pypi.org/simple/clustalo/
2019-06-30T10:38:15     Found link https://files.pythonhosted.org/packages/e4/ec/57f58e09521cd16cf676c99dc959c4d0d58ed38e966b6dd743a9499cdbf2/clustalo-0.1.macosx-10.9-x86_64.tar.gz#sha256=0e76e1de98a820c21d954d302e6a53d30b5e417d2a182b230044662d1f7f749f (from https://pypi.org/simple/clustalo/), version: 0.1.macosx-10.9-x86_64
2019-06-30T10:38:15     Found link https://files.pythonhosted.org/packages/ef/32/5414c43fb3d011a28ee337f7bf201c8fe8b01b2605af7bf9fe6ff32fa84d/clustalo-0.1.tar.gz#sha256=24ace8f7a8eeefca8141fb92c513924e8138207d2d5226e287c4d94b38a27716 (from https://pypi.org/simple/clustalo/), version: 0.1
2019-06-30T10:38:15     Found link https://files.pythonhosted.org/packages/33/5b/491d3340dece281bd6d62f617e12a688fee7d26ab45a48de9909cec18b08/clustalo-0.1.1.macosx-10.9-x86_64.tar.gz#sha256=87dc8d80e2e090429f30b096fe0af187a227c26206734b0e39eea2fbf84fc217 (from https://pypi.org/simple/clustalo/), version: 0.1.1.macosx-10.9-x86_64
2019-06-30T10:38:15     Found link https://files.pythonhosted.org/packages/88/f6/05689339186b64b7e7671ceac15c73a6e3846f4749077f8eeb29d3df09ff/clustalo-0.1.1.tar.gz#sha256=f67429881c29c7bcb52e0cc6269c82a2e30d1d03e33d0fad843d94380e17c517 (from https://pypi.org/simple/clustalo/), version: 0.1.1
2019-06-30T10:38:15   Using version 0.1.1 (newest of versions: 0.1.1)
2019-06-30T10:38:15   Created temporary directory: /tmp/pip-unpack-2i8jgsc6
2019-06-30T10:38:15   Downloading https://files.pythonhosted.org/packages/88/f6/05689339186b64b7e7671ceac15c73a6e3846f4749077f8eeb29d3df09ff/clustalo-0.1.1.tar.gz
2019-06-30T10:38:15   Downloading from URL https://files.pythonhosted.org/packages/88/f6/05689339186b64b7e7671ceac15c73a6e3846f4749077f8eeb29d3df09ff/clustalo-0.1.1.tar.gz#sha256=f67429881c29c7bcb52e0cc6269c82a2e30d1d03e33d0fad843d94380e17c517 (from https://pypi.org/simple/clustalo/)
2019-06-30T10:38:15   Added clustalo==0.1.1 from https://files.pythonhosted.org/packages/88/f6/05689339186b64b7e7671ceac15c73a6e3846f4749077f8eeb29d3df09ff/clustalo-0.1.1.tar.gz#sha256=f67429881c29c7bcb52e0cc6269c82a2e30d1d03e33d0fad843d94380e17c517 to build tracker '/tmp/pip-req-tracker-08a2ae9y'
2019-06-30T10:38:15     Running setup.py (path:/tmp/pip-wheel-g3zear5t/clustalo/setup.py) egg_info for package clustalo
2019-06-30T10:38:15     Running command python setup.py egg_info
2019-06-30T10:38:16     running egg_info
2019-06-30T10:38:16     creating pip-egg-info/clustalo.egg-info
2019-06-30T10:38:16     writing pip-egg-info/clustalo.egg-info/PKG-INFO
2019-06-30T10:38:16     writing dependency_links to pip-egg-info/clustalo.egg-info/dependency_links.txt
2019-06-30T10:38:16     writing top-level names to pip-egg-info/clustalo.egg-info/top_level.txt
2019-06-30T10:38:16     writing manifest file 'pip-egg-info/clustalo.egg-info/SOURCES.txt'
2019-06-30T10:38:17     reading manifest file 'pip-egg-info/clustalo.egg-info/SOURCES.txt'
2019-06-30T10:38:17     writing manifest file 'pip-egg-info/clustalo.egg-info/SOURCES.txt'
2019-06-30T10:38:17   Source in /tmp/pip-wheel-g3zear5t/clustalo has version 0.1.1, which satisfies requirement clustalo==0.1.1 from https://files.pythonhosted.org/packages/88/f6/05689339186b64b7e7671ceac15c73a6e3846f4749077f8eeb29d3df09ff/clustalo-0.1.1.tar.gz#sha256=f67429881c29c7bcb52e0cc6269c82a2e30d1d03e33d0fad843d94380e17c517
2019-06-30T10:38:17   Removed clustalo==0.1.1 from https://files.pythonhosted.org/packages/88/f6/05689339186b64b7e7671ceac15c73a6e3846f4749077f8eeb29d3df09ff/clustalo-0.1.1.tar.gz#sha256=f67429881c29c7bcb52e0cc6269c82a2e30d1d03e33d0fad843d94380e17c517 from build tracker '/tmp/pip-req-tracker-08a2ae9y'
2019-06-30T10:38:17 Building wheels for collected packages: clustalo
2019-06-30T10:38:17   Created temporary directory: /tmp/pip-wheel-um3rbych
2019-06-30T10:38:17   Building wheel for clustalo (setup.py): started
2019-06-30T10:38:17   Destination directory: /tmp/pip-wheel-um3rbych
2019-06-30T10:38:17   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-g3zear5t/clustalo/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-um3rbych
2019-06-30T10:38:18   running bdist_wheel
2019-06-30T10:38:18   running build
2019-06-30T10:38:18   running build_ext
2019-06-30T10:38:18   building 'clustalo' extension
2019-06-30T10:38:18   creating build
2019-06-30T10:38:18   creating build/temp.linux-armv7l-3.7
2019-06-30T10:38:18   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/clustalo -I/usr/local/include/clustalo -I/usr/include/python3.7m -c clustalo.c -o build/temp.linux-armv7l-3.7/clustalo.o -fopenmp
2019-06-30T10:38:19   clustalo.c:2:10: fatal error: clustal-omega.h: No such file or directory
2019-06-30T10:38:19    #include <clustal-omega.h>
2019-06-30T10:38:19             ^~~~~~~~~~~~~~~~~
2019-06-30T10:38:19   compilation terminated.
2019-06-30T10:38:19   error: command 'arm-linux-gnueabihf-gcc' failed with exit status 1
2019-06-30T10:38:19   Building wheel for clustalo (setup.py): finished with status 'error'
2019-06-30T10:38:19   ERROR: Failed building wheel for clustalo
2019-06-30T10:38:19   Running setup.py clean for clustalo
2019-06-30T10:38:19   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-g3zear5t/clustalo/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2019-06-30T10:38:20   running clean
2019-06-30T10:38:20   removing 'build/temp.linux-armv7l-3.7' (and everything under it)
2019-06-30T10:38:20   'build/lib.linux-armv7l-3.7' does not exist -- can't clean it
2019-06-30T10:38:20   'build/bdist.linux-armv7l' does not exist -- can't clean it
2019-06-30T10:38:20   'build/scripts-3.7' does not exist -- can't clean it
2019-06-30T10:38:20   removing 'build'
2019-06-30T10:38:20 Failed to build clustalo
2019-06-30T10:38:20 Cleaning up...
2019-06-30T10:38:20   Removing source in /tmp/pip-wheel-g3zear5t/clustalo
2019-06-30T10:38:20 Removed build tracker '/tmp/pip-req-tracker-08a2ae9y'
2019-06-30T10:38:20 ERROR: Failed to build one or more wheels
2019-06-30T10:38:20 Exception information:
2019-06-30T10:38:20 Traceback (most recent call last):
2019-06-30T10:38:20   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 178, in main
2019-06-30T10:38:20     status = self.run(options, args)
2019-06-30T10:38:20   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 178, in run
2019-06-30T10:38:20     "Failed to build one or more wheels"
2019-06-30T10:38:20 pip._internal.exceptions.CommandError: Failed to build one or more wheels