2019-07-01T00:09:17 Created temporary directory: /tmp/pip-ephem-wheel-cache-3iuqk0tq 2019-07-01T00:09:17 Created temporary directory: /tmp/pip-req-tracker-gkfr6vdm 2019-07-01T00:09:17 Created requirements tracker '/tmp/pip-req-tracker-gkfr6vdm' 2019-07-01T00:09:17 Created temporary directory: /tmp/pip-wheel-l82rjh9_ 2019-07-01T00:09:17 Collecting cutadapt==1.8 2019-07-01T00:09:17 1 location(s) to search for versions of cutadapt: 2019-07-01T00:09:17 * https://pypi.org/simple/cutadapt/ 2019-07-01T00:09:17 Getting page https://pypi.org/simple/cutadapt/ 2019-07-01T00:09:17 Analyzing links from page https://pypi.org/simple/cutadapt/ 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/b7/ef/3877847ef09ba6a66591156efa317eea69a9f8a30a8e7e903380153c97f4/cutadapt-0.9.tar.gz#sha256=85baa72e6ecddc7192cfc397363da97fca6affa92800d4974a262317506ecca6 (from https://pypi.org/simple/cutadapt/), version: 0.9 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/89/15/4eb27a30222bcc07b90ada993473fb12c84134e42b39aa0877fc1bcbca00/cutadapt-0.9.2.tar.gz#sha256=7113d00dfccd14758f1a4efc9ba883b233221cb0eaa4ffa91349c90684db9a2c (from https://pypi.org/simple/cutadapt/), version: 0.9.2 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/a3/a5/58ae7c58120a48d6c48cb7c2963fcff12ca487682b3a70a208a8e67fcf51/cutadapt-0.9.3.tar.gz#sha256=268dd1f028d6e8c95f4a26e7206daa9548308adc9f8c1d1df1e15c13b83b77ba (from https://pypi.org/simple/cutadapt/), version: 0.9.3 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/07/6c/768ba9068fd2f1bcb24a47e860a7de2301b8eaac5a44c5a5f9e01f070e74/cutadapt-0.9.4.tar.gz#sha256=56c4b79b54961a03315cc6a688083435c2dd14285cbebb46fdaf41fa6c90983a (from https://pypi.org/simple/cutadapt/), version: 0.9.4 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/15/49/de312872704fc46942ccc25e82ec904a1ba8242815bae6eaac43fc4be93d/cutadapt-0.9.5.tar.gz#sha256=f05ae1c86bdbc5f9042d51b98a4211c040671668959178bb8d8f1fa9d31b987e (from https://pypi.org/simple/cutadapt/), version: 0.9.5 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/a3/8f/044360e7360cee92477fa0349dc9a125cc23b2942622d1f0cbc3043af8e6/cutadapt-1.0.tar.gz#sha256=8b2a608eb6f73d9cbc3ee04eb4726d4067d6b128d23eba585ceed1aa532e4416 (from https://pypi.org/simple/cutadapt/), version: 1.0 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/40/26/96700ff0585f35bacc9613c3cceb786fa152d4f12379c8ad91bb0f97b62e/cutadapt-1.1.tar.gz#sha256=998b0f89d757348f86542dc8900692de5d93d2904ced3cee78af1a92ee81f4b1 (from https://pypi.org/simple/cutadapt/), version: 1.1 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/1d/68/0d8f81dcbbf553b73f7cc456bcd4def3bb1eddfb8b4110a9cf7a616546d5/cutadapt-1.2.tar.gz#sha256=62fad8f8813537d36db860521cfdd1a058b84f31e108f7515a8e662faf63cde3 (from https://pypi.org/simple/cutadapt/), version: 1.2 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/44/16/cf42365624044fd4c2491015fb7292e8cf67a8832d77be103d55103ebf6d/cutadapt-1.2.1.tar.gz#sha256=1baf91c7351ee3464cd01a7f767fe474675ab1b1f7bb110ffe3722e8126ed5cf (from https://pypi.org/simple/cutadapt/), version: 1.2.1 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/16/6c/c1bd46f6a95a90ea950ac69dbf33b9af443fa100c64c10f3d18b371d9d64/cutadapt-1.3.tar.gz#sha256=95d4b0742a3b1dbb5f68a521962551061c5f99d1d97c9c88c4aba96880a06620 (from https://pypi.org/simple/cutadapt/), version: 1.3 2019-07-01T00:09:18 Found link 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https://files.pythonhosted.org/packages/b0/40/9c853c1dc32414263031f7f956f859ee7af145c84b8391640a1d79ce25df/cutadapt-1.9.1.tar.gz#sha256=a83d24455109be6426ee8de75d906d2b82cc9d59e2e86e0c2b465d3cacb94675 (from https://pypi.org/simple/cutadapt/), version: 1.9.1 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/15/a6/a05e99472b517aafd48824016f66458a31303f05256e9438ce9aec6b6bab/cutadapt-1.10.tar.gz#sha256=71f8cb122d66a3a24fa98267bfda53edc8f54a8e7998464f85dd0f10d71288df (from https://pypi.org/simple/cutadapt/), version: 1.10 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/47/bf/9045e90dac084a90aa2bb72c7d5aadefaea96a5776f445f5b5d9a7a2c78b/cutadapt-1.11.tar.gz#sha256=11d0af9b39d6d9de6d186f113c7b361c24e7432425b9fa68fb2857a4656890cf (from https://pypi.org/simple/cutadapt/), version: 1.11 2019-07-01T00:09:18 Found link 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https://files.pythonhosted.org/packages/33/66/bdeb19c514ed59253ac1ed94fe2deb01c3043d34893c1d113301115d323a/cutadapt-1.14-cp27-cp27mu-manylinux1_x86_64.whl#sha256=89a0cf1affcd9f6b95da21696100319b6baad5d6eb36d4bef7caf37997871cc3 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/3e/c6/4068e29f410eb15639c8fc12be68d00fdfb249eebb28849724f94eeb2326/cutadapt-1.14-cp33-cp33m-manylinux1_x86_64.whl#sha256=774ed824236e7316d288eadc506a39cc2e5aaaafbd50b93c111dc74a48d1af5a (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/59/de/66296843abc7e6bbc410d00616677f4edec5832603583faa90cf3e9e77d3/cutadapt-1.14-cp34-cp34m-manylinux1_x86_64.whl#sha256=2464cd948b485ed53b7a87e8ea55fbb3155533cc189bd97ddba31baaf8df2a22 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/ad/11/f59b76f624c6f4885ac6ae8dc7e0413187b358f4cfe5e7c4eca131ff4671/cutadapt-1.14-cp35-cp35m-manylinux1_x86_64.whl#sha256=9c1423123e764bc95e96d196ee8025a5ec213ffab218fc09088bdd2b577b3a04 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/6d/60/ff2013968bb807af8d999c317a40680a363ff30c005db6657f58654d79ad/cutadapt-1.14-cp36-cp36m-manylinux1_x86_64.whl#sha256=a9903b9288956c6e8c4652670efa4eda40b258f29f00f3b85ae6b16d80b022c8 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/16/e3/06b45eea35359833e7c6fac824b604f1551c2fc7ba0f2bd318d8dd883eb9/cutadapt-1.14.tar.gz#sha256=f32990a8b2f8b53f8f4c723ada3d256a8e8476febdd296506764cc8e83397d3d (from https://pypi.org/simple/cutadapt/), version: 1.14 2019-07-01T00:09:18 Skipping link 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2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/dc/79/f3541a165b21935c5870e53f34986b785bbc013588cd04556e0f08a2198c/cutadapt-1.15-cp34-cp34m-manylinux1_x86_64.whl#sha256=4bd14b279ecf80d6753c288ba72b45e7f83d62f36ed044ce18064164a9f444ab (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/85/79/ba30a290f754b0c18d2bc449a3e0783fa2b3b6a94ed98fd12c18102b9d80/cutadapt-1.15-cp35-cp35m-manylinux1_x86_64.whl#sha256=89a31c60fe474591ae64e9eff572902750463b5b06006949bd25e12a4acfb1d9 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/68/1a/65a748904a677f025843391c1ca160330c9c7b2fd093de5a3d26ebf48863/cutadapt-1.15-cp36-cp36m-manylinux1_x86_64.whl#sha256=03b0d5b4cadfc21f1bb2b7f95040556270254cbf798e16c5ba34287163dd5840 (from https://pypi.org/simple/cutadapt/); it is not 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2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/38/03/992464eb5109ac649f1f12b4d396c1757502ecd926423de5531d1bf19b0d/cutadapt-1.16-cp33-cp33m-manylinux1_x86_64.whl#sha256=e5f461809da7f24645cdf0c562da53dfe4dfa52b4e96493d71b623e9054c4da0 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/db/de/a320e3695d7db172ecd297cc96072b805fb3c2859aa7da819bd0b881ff06/cutadapt-1.16-cp34-cp34m-manylinux1_x86_64.whl#sha256=fccbbc87d09446713169c3df61ea55df3bf2dca84fc5463ad23241a7f155cf53 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/87/54/bad1ed9c34a3d11da45457bde70330506c129ee0e24dcea213461f4e0615/cutadapt-1.16-cp35-cp35m-manylinux1_x86_64.whl#sha256=339e37c790c559ff42f6349ebb10bc4523c81f4bf4b9655156191140c07a3a9e (from https://pypi.org/simple/cutadapt/); it is not 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2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/c0/f7/94cf43b08c0780e09a3565bdbd64e5537f1c1ecf5e02c56781c74e1a94c6/cutadapt-1.17.dev1-cp27-cp27mu-manylinux1_x86_64.whl#sha256=b1519209e94ef72ea0b819378505a0adb037e4fd17d003849dc4d0f3e9caa1d5 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/43/2a/513c9fd9b14f3007686a71dcd1b7651a7cea626df7174f1dc42bfb82814f/cutadapt-1.17.dev1-cp34-cp34m-manylinux1_x86_64.whl#sha256=d594036845e1b362d78776dbc581649ca183848c98bd11a92a8e94f5f1259844 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/91/b0/e861fec705b331e53bdcf9530afbfdfb4ccab003b15a65c9085125b03c20/cutadapt-1.17.dev1-cp35-cp35m-manylinux1_x86_64.whl#sha256=d06368bb706e4f84883646fbe9dac4ac7572b7ad3141af568e2030f64ce63bee (from https://pypi.org/simple/cutadapt/); it 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https://files.pythonhosted.org/packages/ea/68/8ca6aded7d3a5abf64cd3c7e7f409869e7d20e80a265123d9a6939354bcf/cutadapt-1.17-cp37-cp37m-manylinux1_x86_64.whl#sha256=4f3e1332c8566e865a96b2fbbf5d7131d792ac81dc0738a9d2e3640f546b2d9c (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/27/00/39475c0244d0a99920f461c34632c4f7cbf5544adc4a5addcf6db3c6648c/cutadapt-1.17.tar.gz#sha256=3226ff8ae3c378022edba533ad36bcee723d5c7e8c366f5f3aa5bee7a7fa3d46 (from https://pypi.org/simple/cutadapt/), version: 1.17 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/5b/3f/2748d02acd00bc51f47ae97e3adb4215d86155ebc1f413a1a38c8001be8d/cutadapt-1.18-cp27-cp27m-manylinux1_x86_64.whl#sha256=c12d14cb6904cc450fe5e2277506b4948eeb09875e51f606430f14b2262f3087 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/10/9f/7d3383601810d93eb6df03e976fbb2863b827063c7a1f8d4c68eea967c32/cutadapt-1.18-cp27-cp27mu-manylinux1_x86_64.whl#sha256=56961a2bdca4f73e9056d14caa2bf6ec9f1f53b6e2d93ee2ca136a5d0695970e (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/b2/ea/f40e98039780e4d5ab749818885a90485061644044e7e9bf1cd7729b93e1/cutadapt-1.18-cp34-cp34m-manylinux1_x86_64.whl#sha256=6b97365966e3de400f237ca84f8d089cd756a947e601bddd531b6fd77497ee9e (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/bf/00/4567d9688cb49824e69188f85b331a01308a764a0ea935149d1a116fb0cc/cutadapt-1.18-cp35-cp35m-manylinux1_x86_64.whl#sha256=fd44cff652875f09b1d3525e47c4364d2f84a0f1b99a86eb20ae28929f2b023c (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/8f/4e/2875c38be6868aefda10aad3a8fa65a0238f3377b61d3f19469888181398/cutadapt-1.18-cp36-cp36m-manylinux1_x86_64.whl#sha256=7070c3652b0db802ccb653785243dff6beb6ac53493c737335e1e337c08e7ef2 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/d4/9f/ccb9df42f540243972f07bc0063165df49ea544a7f22f1d2cf20e7a8e204/cutadapt-1.18-cp37-cp37m-manylinux1_x86_64.whl#sha256=b7e6d83d52a365fa4c55a162e955e106f74617c913982fa06a392116c9998885 (from https://pypi.org/simple/cutadapt/); it is not compatible with this Python 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/fd/4d/3ac2947d36e2d56ce1513dc4a53d3a45e520d7ccfb43af9ba85408e44c69/cutadapt-1.18.tar.gz#sha256=17aabf9b19d09a426d96030a83ad003c97b26dba9d45bf5570d33088fcd533f9 (from https://pypi.org/simple/cutadapt/), version: 1.18 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/5c/9f/8fa48fa455a42e376cb726b09e4da6627020180b4faabf11ceeab43dc3d2/cutadapt-2.0.dev1-cp34-cp34m-manylinux1_x86_64.whl#sha256=699ed797d981ae1991a63ebe8d1ba9d832465144b22da917a0c4914b6f0e3962 (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/5c/db/1a8f91a7f77070b1eb425fea199f05624d440ecf97ffe14d79fd3fa183bb/cutadapt-2.0.dev1-cp35-cp35m-manylinux1_x86_64.whl#sha256=901c05bf57d2b139de89e643a7272b407f2871aeaede1c97b204eea6632836a3 (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/66/8b/2d18fdc6ee6795a1d70ae64cb1cc37aacad2caacfb28cf58445f8f1c27a2/cutadapt-2.0.dev1-cp36-cp36m-manylinux1_x86_64.whl#sha256=8d9bc8d8bbc571de12347b3f66517f042703090f8c2228266531a91129e49b8d (from 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https://files.pythonhosted.org/packages/f5/61/2d10801a9aac899cc91f191937235f73512eca84eee4845214c1ae3d89e0/cutadapt-2.0a1-cp34-cp34m-manylinux1_x86_64.whl#sha256=b5ffde801755e40f6c4a68110b818545b909a443876a841684acec3c7ec3e4ba (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/57/31/57662c5b15ad1ab7611218d6c51dab6760eb56da7a4d0816856ae50d4dde/cutadapt-2.0a1-cp35-cp35m-manylinux1_x86_64.whl#sha256=241d9b4ed9e984df1c7422bc1887fdebd849458d549b88562d1dc51d95ec1573 (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/5f/21/05452bf81abc2ea794f047a6fbbd3074f1132963e24a7a27d949ebfb3c14/cutadapt-2.0a1-cp36-cp36m-manylinux1_x86_64.whl#sha256=97e9477b33b8fcae65882ea9377541eedfd28982a32395336295ba40e45fed7a (from https://pypi.org/simple/cutadapt/) 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https://files.pythonhosted.org/packages/f4/65/1c38238533321535055efe2b2acda86aa6e708c786e51c5aafeabd3bb9a1/cutadapt-2.0-cp37-cp37m-manylinux1_x86_64.whl#sha256=d0d4a69a36fb78be955645adf4a0c15ee5ffa2ab1a1c211e26c0fe5ef192ad40 (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/f2/bd/c4054b10cff0a595f6343edf874b98d6bf568703f0bacb0bfd2967ef662a/cutadapt-2.0.tar.gz#sha256=e2f94acdcba745de8c9c44106e99b22975439c9a7ec236aa85f7c3baea839fd1 (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4), version: 2.0 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/95/ff/9c4b3c1ddd9c91a0e05f4e3515cabf6a60e5f41ec74e3a864f63631db47a/cutadapt-2.1-cp34-cp34m-manylinux1_x86_64.whl#sha256=621a63fde47acb9b8e75fad6f9896e84a36bd28ca1fdef413e26f00fa89bb34e (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/3a/12/4df06922c3ae345ae6824f21eff3ceabfb26c6cb1445759eb825cf84332d/cutadapt-2.1-cp35-cp35m-manylinux1_x86_64.whl#sha256=bd106cbac4430f7c69ef84a9d22288cce928b7f3e9728a6a7b8263c99fe8f7dd (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/4e/de/b47d02f9559e5b0767f8b3c6595a5b04de34f326945cdab5bc632a6399e7/cutadapt-2.1-cp36-cp36m-manylinux1_x86_64.whl#sha256=3c7c9ac58e2a3945db2075544353c1135a0d1b9e3b3d4f40c95e323dc1915c8e (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/9f/a9/687ed151f2ec6e41963befe0243f6a95786fbb644e625d3eba0dc7db9b1a/cutadapt-2.1-cp37-cp37m-manylinux1_x86_64.whl#sha256=b000edcf1c156f553694aaff3ace308b5a4d074c77e1261232a047537f0e3eb7 (from 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https://files.pythonhosted.org/packages/a2/d9/c705e185692b41f1afda6ba74eb81b5ae890a88a956365c143782b6063b2/cutadapt-2.2-cp35-cp35m-manylinux1_x86_64.whl#sha256=a177e51ec1f0af921ee77e4ca69b0b892d6958374299260a914e9617d6f4392b (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/3e/e0/cb79d94f57851546e1ec84d63452933d42e53b911702648d7c62be83f9ba/cutadapt-2.2-cp36-cp36m-manylinux1_x86_64.whl#sha256=e2e34e5924693b87a91176cf80a4a81a0a407a7b18a1ed7c140fb3a3f8b31cc5 (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/87/fd/8bca4e32edba080f8f5c91604106f9dec12763921fb97ae025df99e0d0b2/cutadapt-2.2-cp37-cp37m-manylinux1_x86_64.whl#sha256=bf08fc742858534d364bfe16a35a88ce0b9a2f4f18958adb87c7d3ee4250d13a (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/6e/78/e14e1b54d1c73634ddbcdb5cc891569419108ee5f597da4a9bad251e5361/cutadapt-2.2.tar.gz#sha256=78e361d4e23e5ca9fc99ec286419970cf4b6466216d3fb6145fa6766c1f9f36f (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4), version: 2.2 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/2d/63/46f668f32be4210da7e08ce5017b85d2dd6f306c0e38bfefaa684b51bb44/cutadapt-2.3-cp34-cp34m-manylinux1_x86_64.whl#sha256=f0552abb5985cfb98c70598ca1c117791fc8532989d1ae5e846bda9836804ba7 (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/31/7a/d543f826eef40a87fd0cfdfb5d14c6cea0c1ec88a2baab2f8cdd1cf75653/cutadapt-2.3-cp35-cp35m-manylinux1_x86_64.whl#sha256=b195d38e55b8fcde55b1c30dd48f47945d8f45b9c0959631591f72d3a48dd6a3 (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/5e/92/ca280574dd289e138db09cdb47d5c8d89b27402ffb8fc1ec4eab2fe0e4a0/cutadapt-2.3-cp36-cp36m-manylinux1_x86_64.whl#sha256=3634fa74fc78eae978b7e22d169fede56ab1e8c223c60918b82189dbca22d7fb (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Skipping link https://files.pythonhosted.org/packages/41/83/b48e0c8141dd518a32f1db2de36f1dcea212be2a6da732c660597e7ccbeb/cutadapt-2.3-cp37-cp37m-manylinux1_x86_64.whl#sha256=4cef38987bb714e2f2702ca14165b7168586e00202622fbd172ac453d3697495 (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4); it is not compatible with this Python 2019-07-01T00:09:18 Found link https://files.pythonhosted.org/packages/b9/21/82fc17e6434e0ee15f24016981fc718fc0b7730f0f849c98879f17d2c1e9/cutadapt-2.3.tar.gz#sha256=98b864ac9d81525263897bdda9ec5bfd4ff6b5d2ef48f915219def620a6e92ac (from https://pypi.org/simple/cutadapt/) (requires-python:>=3.4), version: 2.3 2019-07-01T00:09:18 Using version 1.8 (newest of versions: 1.8) 2019-07-01T00:09:18 Created temporary directory: /tmp/pip-unpack-4um43pbr 2019-07-01T00:09:18 Downloading https://files.pythonhosted.org/packages/54/91/7943f35a36f808a7f352720d662c621993db5f01f499382897b9cbb1893d/cutadapt-1.8.tar.gz (303kB) 2019-07-01T00:09:18 Downloading from URL https://files.pythonhosted.org/packages/54/91/7943f35a36f808a7f352720d662c621993db5f01f499382897b9cbb1893d/cutadapt-1.8.tar.gz#sha256=b72e55b36d319567ecc586b99db91cc8b3240e1e5fcd8237ad0e22d69ea317b8 (from https://pypi.org/simple/cutadapt/) 2019-07-01T00:09:19 Added cutadapt==1.8 from https://files.pythonhosted.org/packages/54/91/7943f35a36f808a7f352720d662c621993db5f01f499382897b9cbb1893d/cutadapt-1.8.tar.gz#sha256=b72e55b36d319567ecc586b99db91cc8b3240e1e5fcd8237ad0e22d69ea317b8 to build tracker '/tmp/pip-req-tracker-gkfr6vdm' 2019-07-01T00:09:19 Running setup.py (path:/tmp/pip-wheel-l82rjh9_/cutadapt/setup.py) egg_info for package cutadapt 2019-07-01T00:09:19 Running command python setup.py egg_info 2019-07-01T00:09:20 running egg_info 2019-07-01T00:09:20 creating pip-egg-info/cutadapt.egg-info 2019-07-01T00:09:20 writing pip-egg-info/cutadapt.egg-info/PKG-INFO 2019-07-01T00:09:20 writing dependency_links to pip-egg-info/cutadapt.egg-info/dependency_links.txt 2019-07-01T00:09:20 writing top-level names to pip-egg-info/cutadapt.egg-info/top_level.txt 2019-07-01T00:09:20 writing manifest file 'pip-egg-info/cutadapt.egg-info/SOURCES.txt' 2019-07-01T00:09:21 reading manifest file 'pip-egg-info/cutadapt.egg-info/SOURCES.txt' 2019-07-01T00:09:21 writing manifest file 'pip-egg-info/cutadapt.egg-info/SOURCES.txt' 2019-07-01T00:09:21 Source in /tmp/pip-wheel-l82rjh9_/cutadapt has version 1.8, which satisfies requirement cutadapt==1.8 from https://files.pythonhosted.org/packages/54/91/7943f35a36f808a7f352720d662c621993db5f01f499382897b9cbb1893d/cutadapt-1.8.tar.gz#sha256=b72e55b36d319567ecc586b99db91cc8b3240e1e5fcd8237ad0e22d69ea317b8 2019-07-01T00:09:21 Removed cutadapt==1.8 from https://files.pythonhosted.org/packages/54/91/7943f35a36f808a7f352720d662c621993db5f01f499382897b9cbb1893d/cutadapt-1.8.tar.gz#sha256=b72e55b36d319567ecc586b99db91cc8b3240e1e5fcd8237ad0e22d69ea317b8 from build tracker '/tmp/pip-req-tracker-gkfr6vdm' 2019-07-01T00:09:21 Building wheels for collected packages: cutadapt 2019-07-01T00:09:21 Created temporary directory: /tmp/pip-wheel-y2fvwykc 2019-07-01T00:09:21 Building wheel for cutadapt (setup.py): started 2019-07-01T00:09:21 Destination directory: /tmp/pip-wheel-y2fvwykc 2019-07-01T00:09:21 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-l82rjh9_/cutadapt/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-y2fvwykc 2019-07-01T00:09:22 running bdist_wheel 2019-07-01T00:09:22 running build 2019-07-01T00:09:22 running build_py 2019-07-01T00:09:23 creating build 2019-07-01T00:09:23 creating build/lib.linux-armv7l-3.7 2019-07-01T00:09:23 creating build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/writers.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/modifiers.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/colorspace.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/qualtrim.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/xopen.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/adapters.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/align.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/report.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/seqio.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/compat.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 copying cutadapt/__init__.py -> build/lib.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 creating build/lib.linux-armv7l-3.7/cutadapt/scripts 2019-07-01T00:09:23 copying cutadapt/scripts/cutadapt.py -> build/lib.linux-armv7l-3.7/cutadapt/scripts 2019-07-01T00:09:23 copying cutadapt/scripts/__init__.py -> build/lib.linux-armv7l-3.7/cutadapt/scripts 2019-07-01T00:09:23 running build_ext 2019-07-01T00:09:23 building 'cutadapt._align' extension 2019-07-01T00:09:23 creating build/temp.linux-armv7l-3.7 2019-07-01T00:09:23 creating build/temp.linux-armv7l-3.7/cutadapt 2019-07-01T00:09:23 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c cutadapt/_align.c -o build/temp.linux-armv7l-3.7/cutadapt/_align.o 2019-07-01T00:09:32 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/cutadapt/_align.o -o build/lib.linux-armv7l-3.7/cutadapt/_align.cpython-37m-arm-linux-gnueabihf.so 2019-07-01T00:09:32 building 'cutadapt._qualtrim' extension 2019-07-01T00:09:32 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c cutadapt/_qualtrim.c -o build/temp.linux-armv7l-3.7/cutadapt/_qualtrim.o 2019-07-01T00:09:35 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/cutadapt/_qualtrim.o -o build/lib.linux-armv7l-3.7/cutadapt/_qualtrim.cpython-37m-arm-linux-gnueabihf.so 2019-07-01T00:09:35 building 'cutadapt._seqio' extension 2019-07-01T00:09:35 arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c cutadapt/_seqio.c -o build/temp.linux-armv7l-3.7/cutadapt/_seqio.o 2019-07-01T00:09:35 cutadapt/_seqio.c: In function ‘__Pyx_ExceptionSwap’: 2019-07-01T00:09:35 cutadapt/_seqio.c:6891:24: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2019-07-01T00:09:35 tmp_type = tstate->exc_type; 2019-07-01T00:09:35 ^~~~~~~~ 2019-07-01T00:09:35 curexc_type 2019-07-01T00:09:35 cutadapt/_seqio.c:6892:25: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2019-07-01T00:09:35 tmp_value = tstate->exc_value; 2019-07-01T00:09:35 ^~~~~~~~~ 2019-07-01T00:09:35 curexc_value 2019-07-01T00:09:35 cutadapt/_seqio.c:6893:22: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2019-07-01T00:09:35 tmp_tb = tstate->exc_traceback; 2019-07-01T00:09:35 ^~~~~~~~~~~~~ 2019-07-01T00:09:35 curexc_traceback 2019-07-01T00:09:35 cutadapt/_seqio.c:6894:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_type’; did you mean ‘curexc_type’? 2019-07-01T00:09:35 tstate->exc_type = *type; 2019-07-01T00:09:35 ^~~~~~~~ 2019-07-01T00:09:35 curexc_type 2019-07-01T00:09:35 cutadapt/_seqio.c:6895:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_value’; did you mean ‘curexc_value’? 2019-07-01T00:09:35 tstate->exc_value = *value; 2019-07-01T00:09:35 ^~~~~~~~~ 2019-07-01T00:09:35 curexc_value 2019-07-01T00:09:35 cutadapt/_seqio.c:6896:13: error: ‘PyThreadState’ {aka ‘struct _ts’} has no member named ‘exc_traceback’; did you mean ‘curexc_traceback’? 2019-07-01T00:09:35 tstate->exc_traceback = *tb; 2019-07-01T00:09:35 ^~~~~~~~~~~~~ 2019-07-01T00:09:35 curexc_traceback 2019-07-01T00:09:36 error: command 'arm-linux-gnueabihf-gcc' failed with exit status 1 2019-07-01T00:09:36 Building wheel for cutadapt (setup.py): finished with status 'error' 2019-07-01T00:09:36 ERROR: Failed building wheel for cutadapt 2019-07-01T00:09:36 Running setup.py clean for cutadapt 2019-07-01T00:09:36 Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-l82rjh9_/cutadapt/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2019-07-01T00:09:37 running clean 2019-07-01T00:09:37 removing 'build/temp.linux-armv7l-3.7' (and everything under it) 2019-07-01T00:09:37 removing 'build/lib.linux-armv7l-3.7' (and everything under it) 2019-07-01T00:09:37 'build/bdist.linux-armv7l' does not exist -- can't clean it 2019-07-01T00:09:37 'build/scripts-3.7' does not exist -- can't clean it 2019-07-01T00:09:37 removing 'build' 2019-07-01T00:09:37 Failed to build cutadapt 2019-07-01T00:09:37 Cleaning up... 2019-07-01T00:09:37 Removing source in /tmp/pip-wheel-l82rjh9_/cutadapt 2019-07-01T00:09:37 Removed build tracker '/tmp/pip-req-tracker-gkfr6vdm' 2019-07-01T00:09:37 ERROR: Failed to build one or more wheels 2019-07-01T00:09:37 Exception information: 2019-07-01T00:09:37 Traceback (most recent call last): 2019-07-01T00:09:37 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 178, in main 2019-07-01T00:09:37 status = self.run(options, args) 2019-07-01T00:09:37 File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 178, in run 2019-07-01T00:09:37 "Failed to build one or more wheels" 2019-07-01T00:09:37 pip._internal.exceptions.CommandError: Failed to build one or more wheels