2019-07-16T11:12:11 Created temporary directory: /tmp/pip-ephem-wheel-cache-yomseo2t
2019-07-16T11:12:11 Created temporary directory: /tmp/pip-req-tracker-d4kt31gv
2019-07-16T11:12:11 Created requirements tracker '/tmp/pip-req-tracker-d4kt31gv'
2019-07-16T11:12:11 Created temporary directory: /tmp/pip-wheel-o64jclgx
2019-07-16T11:12:11 Collecting dms-tools2==2.4.3
2019-07-16T11:12:11   1 location(s) to search for versions of dms-tools2:
2019-07-16T11:12:11   * https://pypi.org/simple/dms-tools2/
2019-07-16T11:12:11   Getting page https://pypi.org/simple/dms-tools2/
2019-07-16T11:12:12   Analyzing links from page https://pypi.org/simple/dms-tools2/
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/07/75/4fbadd98c175887813a85591a23d8ea5598b59c9d45d00259d45b88c12fa/dms_tools2-2.0.1.tar.gz#sha256=8f103dc4a04d5381ca719228b251761a5e7ea5cb9d9123e9070386c5f761c392 (from https://pypi.org/simple/dms-tools2/), version: 2.0.1
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/90/7a/ffb4780c434630a0422f7d2888718d19695f68fc694f6b1da4aaa7fe4c7f/dms_tools2-2.0.2.tar.gz#sha256=e8bb44d791c045bcf3b6ced220d970c878e7546f5b406897446cab7649305735 (from https://pypi.org/simple/dms-tools2/), version: 2.0.2
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/69/87/e0c1a98625efafa1c8925971490e735d1321980112ca55a76d500a86d9e8/dms_tools2-2.1.0.tar.gz#sha256=1d71e002c48405df9fff60dfac7765147613d3cfb5929fb4441c90d231a5a0ee (from https://pypi.org/simple/dms-tools2/), version: 2.1.0
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/f1/dc/a1fbce78403d8ed26fd7d606c7f56a6efeacd251b85648ee6aa41917c316/dms_tools2-2.2.0.tar.gz#sha256=259bb3198ad171ef95cd028ad731550b630957cfa416a866177c3982690673b7 (from https://pypi.org/simple/dms-tools2/), version: 2.2.0
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/1c/51/1552b0b61f89083bf86b4ef8365e88ce3219126b79bbc5466f3409609c37/dms_tools2-2.2.1.tar.gz#sha256=b0283f384c2d0c940c1ce1c2485dd8b83b632d0b9ecf2bf62b53a77a20db957b (from https://pypi.org/simple/dms-tools2/), version: 2.2.1
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/e7/f9/02acaa14a310816719447d5a18c7406d8d88e71d4bce53fd87f5a847dfc0/dms_tools2-2.2.2.tar.gz#sha256=add71d52e6f284bc13396d13d563b5a5299668de3adba10e86ccd572c6559974 (from https://pypi.org/simple/dms-tools2/), version: 2.2.2
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/13/bb/e8ad43a93b092b6cd81b34a29459fbcc26a1167803b7cde119833ed8a0f7/dms_tools2-2.2.3.tar.gz#sha256=57c20a2b1501e4076abf74dcb258dc9a6453735f28a9da1e6b91f481b4b2ec20 (from https://pypi.org/simple/dms-tools2/), version: 2.2.3
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/22/40/4410521a08ec50ecc40e937384d92cafb5de3aa33c1e169942c30b688563/dms_tools2-2.2.4.tar.gz#sha256=9fa853b23a13342ca27a69fa0c4bfa98123e2c9fc2f8f56c4ee5b225d83f674e (from https://pypi.org/simple/dms-tools2/), version: 2.2.4
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/8c/d6/433fc9550beea53f895b440ebb4a9d08ef7fec5642279bb5bcb017d280df/dms_tools2-2.2.5.tar.gz#sha256=9a847eebf3ac4d7341a366de97fdb8fe7f43bd341f95aabbabb8c735e89dcc8a (from https://pypi.org/simple/dms-tools2/), version: 2.2.5
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/2d/f1/f4c642a5daf108e2e5458344944988a0b4d1537c831005d798bcd1c0482b/dms_tools2-2.2.6.tar.gz#sha256=625c2fd34e48766c311eaafe851433037b7d112fade27ea8bf904a4e4e61a23a (from https://pypi.org/simple/dms-tools2/), version: 2.2.6
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/93/5c/ccc44c9d59216930613c1b5e3a04e378faa5f8e9507d2143021712a79687/dms_tools2-2.2.7.tar.gz#sha256=beacc05e36996db3b21c5c56dc78d24d191f00ae152830a5f7ccd9c36bbed4d6 (from https://pypi.org/simple/dms-tools2/), version: 2.2.7
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/18/85/f47c37cf7635415d2bb0243384df29dcf6fc7e1231f5925cdd594e13c7fd/dms_tools2-2.2.8.tar.gz#sha256=d729fcba0bd54e84228e8c6e4f7bbb29f0cf634b9b019808a76ed9cfd105a139 (from https://pypi.org/simple/dms-tools2/), version: 2.2.8
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/21/11/593b69c95875758e4ed9bc65dff2099a59ab915d7a2d43ccf13a6cfc1bb8/dms_tools2-2.2.9.tar.gz#sha256=31ebe7966063ea13341e482614af083bef4d4356165093d7b9435d7b10ce6c44 (from https://pypi.org/simple/dms-tools2/), version: 2.2.9
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/45/9e/69ed89c441c953fec8afe619714780b618e06c0f98b914404457d71847f2/dms_tools2-2.3.0.tar.gz#sha256=58b15aee6ff5dbe299983a379285fc72e66f4f213d564456ade5b345b6842d91 (from https://pypi.org/simple/dms-tools2/), version: 2.3.0
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/fa/29/20c1bfe0631f90cf97a1de48b5a417d648a75b3e724715aea6c8e1080428/dms_tools2-2.4.0.tar.gz#sha256=b30faf0008e1d630118d104ab579c204ee85ae0bd150bff0f9e0ee454e48724d (from https://pypi.org/simple/dms-tools2/), version: 2.4.0
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/e9/3e/1cae1787492bce59aac6d09e1c8ed1ce7957f9ed9e80234655799ec922dd/dms_tools2-2.4.1.tar.gz#sha256=f47b40d94966f8c591d70cb71a89fb9b31605d5e636fcb0ced4f03e0a07af050 (from https://pypi.org/simple/dms-tools2/), version: 2.4.1
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/92/a3/67fb4e38e3bd08ae8223bea8a5fcd8fee4cee6530d4a0b6c2505e1508f1d/dms_tools2-2.4.2.tar.gz#sha256=cc19789172f587031466ba056cfca5a4d1a2abe61eaf4ac900bd799ec720d098 (from https://pypi.org/simple/dms-tools2/), version: 2.4.2
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/dc/3c/e6aa64877a6faef1e908311e1c3a279a0393db7229d9a4e3c6eca2a98595/dms_tools2-2.4.3.tar.gz#sha256=8cf17a08598c2bf52fcc1ae1e9f2df6d1d431a9b08d31a46a5b3c989218e5ec4 (from https://pypi.org/simple/dms-tools2/), version: 2.4.3
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/10/83/9d2a8dcab8faeadecbd0121d4df9b9f18aaade46f9aaa25d44228a2cee43/dms_tools2-2.4.4.tar.gz#sha256=c5bebad873d43b8b2d515f4cefeb270c556fce85eba9b1acb6336918e8707675 (from https://pypi.org/simple/dms-tools2/), version: 2.4.4
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/39/e5/c4fae5a115b4aa0304a8bef13fcb6f3bdde8772c8a3623ab0f0175df884c/dms_tools2-2.4.5.tar.gz#sha256=e6c38a08f9131ef659ef0f07d824611309ccf4c05ab5544941c1e96f6f9fc1ba (from https://pypi.org/simple/dms-tools2/), version: 2.4.5
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/bc/07/38053dadea53b9d8e4344ab8d60849230e4f1514ab4b0ecb7e44fb9553c7/dms_tools2-2.4.6.tar.gz#sha256=749190119d901ce94709c368710e1c2455dfaa3f9ca7286a04024f1d5166091f (from https://pypi.org/simple/dms-tools2/), version: 2.4.6
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/ed/38/23681b91bd02c8df69a7b117c2738b6af21c71341ae1e1d6c02233818cc6/dms_tools2-2.4.7.tar.gz#sha256=fa1d64edbed88cb746813f4397bc0dcd5b6a9f44cbf870926b0449cb80659cff (from https://pypi.org/simple/dms-tools2/), version: 2.4.7
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/a0/31/ccaca7d7cfbc16e844d447695a07bd50ffa44d3aa8ec38e40fa2325e0a8d/dms_tools2-2.4.8.tar.gz#sha256=ee1d5d9d9b8ed8813c48a9523d28e36c5242d35f78a2deda8f5a55b96d10cb73 (from https://pypi.org/simple/dms-tools2/), version: 2.4.8
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/79/ee/05ec786c214bb5215cac107d00d7c75d5d6ed104a6f37140fab50b954ede/dms_tools2-2.4.9.tar.gz#sha256=cb78028df6584824ce8bb10cfdadc059cf193b17b7444fcee038ba9a4a0e737d (from https://pypi.org/simple/dms-tools2/), version: 2.4.9
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/f8/53/b5554b760b83d61a2e8542a776ae805ef2e02f3e3766f9d5ed6b1721d687/dms_tools2-2.4.10.tar.gz#sha256=09121f448e7cb6ecd3edcb110597251ea17f100e9cdc3aa645286b989cd2431b (from https://pypi.org/simple/dms-tools2/), version: 2.4.10
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/b1/af/72547d37a245d0e25493414abff0d4580b09efeff82c79a8001e18444f47/dms_tools2-2.4.11.tar.gz#sha256=0e2e6cdec76566fac99046fc6d45cc7d52794eadbce4e600f405aa70ca0a5d95 (from https://pypi.org/simple/dms-tools2/), version: 2.4.11
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/1c/98/e89ab6e50ac32f87e17eeaa3a1038fa4e3bc4e3c28dc3853209639aae39f/dms_tools2-2.4.12.tar.gz#sha256=1840a23b196e2f5c474fd4411dcb4ac6079048c620a4747dcae530bc134706e2 (from https://pypi.org/simple/dms-tools2/), version: 2.4.12
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/a9/9b/84af9f00428b5b26a6867ab42d9ee3b2e888b1097ae49062b5d33753f012/dms_tools2-2.4.13.tar.gz#sha256=8b5c28f28e137187118fa7891f33bf55adb0e1bcf947b19e0aa4c447a4c4f1fa (from https://pypi.org/simple/dms-tools2/), version: 2.4.13
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/92/ff/32ecd9c9d62b9606bc5245bf567a09c9e96c8189698fe906a56e9699c16e/dms_tools2-2.4.14.tar.gz#sha256=0faf247c95fe0cf4ba9561e415dc91762b073147f4dc886e18e389ff91b5074c (from https://pypi.org/simple/dms-tools2/), version: 2.4.14
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/29/3f/169f00dce2a47ef625acf18e5e697528ac37f19d5c975807d944ec754bb4/dms_tools2-2.4.15.tar.gz#sha256=e86a993f1012714cef60ed810224146ee28b68b8a71d4accc0b0a6e9c0740570 (from https://pypi.org/simple/dms-tools2/), version: 2.4.15
2019-07-16T11:12:12     Found link https://files.pythonhosted.org/packages/6e/fb/2dbdbd1d89cbc80a47273fdec793a9c00e2f234d111b720550f0d1f6cd66/dms_tools2-2.4.16.tar.gz#sha256=2eacf8ddf0e63a13c91808b77facf0575cb51bb71b2fca9312e33d82a8166b5d (from https://pypi.org/simple/dms-tools2/), version: 2.4.16
2019-07-16T11:12:12   Using version 2.4.3 (newest of versions: 2.4.3)
2019-07-16T11:12:12   Created temporary directory: /tmp/pip-unpack-5t4k7q0o
2019-07-16T11:12:12   Downloading https://files.pythonhosted.org/packages/dc/3c/e6aa64877a6faef1e908311e1c3a279a0393db7229d9a4e3c6eca2a98595/dms_tools2-2.4.3.tar.gz (174kB)
2019-07-16T11:12:12   Downloading from URL https://files.pythonhosted.org/packages/dc/3c/e6aa64877a6faef1e908311e1c3a279a0393db7229d9a4e3c6eca2a98595/dms_tools2-2.4.3.tar.gz#sha256=8cf17a08598c2bf52fcc1ae1e9f2df6d1d431a9b08d31a46a5b3c989218e5ec4 (from https://pypi.org/simple/dms-tools2/)
2019-07-16T11:12:12   Added dms-tools2==2.4.3 from https://files.pythonhosted.org/packages/dc/3c/e6aa64877a6faef1e908311e1c3a279a0393db7229d9a4e3c6eca2a98595/dms_tools2-2.4.3.tar.gz#sha256=8cf17a08598c2bf52fcc1ae1e9f2df6d1d431a9b08d31a46a5b3c989218e5ec4 to build tracker '/tmp/pip-req-tracker-d4kt31gv'
2019-07-16T11:12:12     Running setup.py (path:/tmp/pip-wheel-o64jclgx/dms-tools2/setup.py) egg_info for package dms-tools2
2019-07-16T11:12:12     Running command python setup.py egg_info
2019-07-16T11:12:14     running egg_info
2019-07-16T11:12:14     creating pip-egg-info/dms_tools2.egg-info
2019-07-16T11:12:14     writing pip-egg-info/dms_tools2.egg-info/PKG-INFO
2019-07-16T11:12:14     writing dependency_links to pip-egg-info/dms_tools2.egg-info/dependency_links.txt
2019-07-16T11:12:14     writing requirements to pip-egg-info/dms_tools2.egg-info/requires.txt
2019-07-16T11:12:14     writing top-level names to pip-egg-info/dms_tools2.egg-info/top_level.txt
2019-07-16T11:12:14     writing manifest file 'pip-egg-info/dms_tools2.egg-info/SOURCES.txt'
2019-07-16T11:12:15     reading manifest file 'pip-egg-info/dms_tools2.egg-info/SOURCES.txt'
2019-07-16T11:12:15     reading manifest template 'MANIFEST.in'
2019-07-16T11:12:15     writing manifest file 'pip-egg-info/dms_tools2.egg-info/SOURCES.txt'
2019-07-16T11:12:15   Source in /tmp/pip-wheel-o64jclgx/dms-tools2 has version 2.4.3, which satisfies requirement dms-tools2==2.4.3 from https://files.pythonhosted.org/packages/dc/3c/e6aa64877a6faef1e908311e1c3a279a0393db7229d9a4e3c6eca2a98595/dms_tools2-2.4.3.tar.gz#sha256=8cf17a08598c2bf52fcc1ae1e9f2df6d1d431a9b08d31a46a5b3c989218e5ec4
2019-07-16T11:12:15   Removed dms-tools2==2.4.3 from https://files.pythonhosted.org/packages/dc/3c/e6aa64877a6faef1e908311e1c3a279a0393db7229d9a4e3c6eca2a98595/dms_tools2-2.4.3.tar.gz#sha256=8cf17a08598c2bf52fcc1ae1e9f2df6d1d431a9b08d31a46a5b3c989218e5ec4 from build tracker '/tmp/pip-req-tracker-d4kt31gv'
2019-07-16T11:12:15 Building wheels for collected packages: dms-tools2
2019-07-16T11:12:15   Created temporary directory: /tmp/pip-wheel-fluoh5bf
2019-07-16T11:12:15   Building wheel for dms-tools2 (setup.py): started
2019-07-16T11:12:15   Destination directory: /tmp/pip-wheel-fluoh5bf
2019-07-16T11:12:15   Running command /usr/bin/python3 -u -c 'import setuptools, tokenize;__file__='"'"'/tmp/pip-wheel-o64jclgx/dms-tools2/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-fluoh5bf
2019-07-16T11:12:17   running bdist_wheel
2019-07-16T11:12:17   running build
2019-07-16T11:12:17   running build_py
2019-07-16T11:12:17   creating build
2019-07-16T11:12:17   creating build/lib.linux-armv7l-3.7
2019-07-16T11:12:17   creating build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/codonvarianttable.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/rplot.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/dssp.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/_metadata.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/protstruct.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/pacbio.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/diffsel.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/sra.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/plot.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/__init__.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/prefs.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/barcodes.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/neutcurve.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/ipython_utils.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/fracsurvive.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/compareprefs.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/parseargs.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/seqnumbering.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/minimap2.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/utils.py -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   copying dms_tools2/rplot_Rcode.R -> build/lib.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:17   running build_ext
2019-07-16T11:12:18   building 'dms_tools2._cutils' extension
2019-07-16T11:12:18   creating build/temp.linux-armv7l-3.7
2019-07-16T11:12:18   creating build/temp.linux-armv7l-3.7/dms_tools2
2019-07-16T11:12:18   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c dms_tools2/_cutils.c -o build/temp.linux-armv7l-3.7/dms_tools2/_cutils.o -Wno-error=declaration-after-statement
2019-07-16T11:12:19   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/dms_tools2/_cutils.o -o build/lib.linux-armv7l-3.7/dms_tools2/_cutils.cpython-37m-arm-linux-gnueabihf.so
2019-07-16T11:12:19   running build_scripts
2019-07-16T11:12:19   creating build/scripts-3.7
2019-07-16T11:12:19   copying and adjusting scripts/dms2_bcsubamp -> build/scripts-3.7
2019-07-16T11:12:19   copying and adjusting scripts/dms2_batch_bcsubamp -> build/scripts-3.7
2019-07-16T11:12:19   copying and adjusting scripts/dms2_prefs -> build/scripts-3.7
2019-07-16T11:12:19   copying and adjusting scripts/dms2_batch_prefs -> build/scripts-3.7
2019-07-16T11:12:19   copying and adjusting scripts/dms2_diffsel -> build/scripts-3.7
2019-07-16T11:12:19   copying and adjusting scripts/dms2_batch_diffsel -> build/scripts-3.7
2019-07-16T11:12:19   copying and adjusting scripts/dms2_fracsurvive -> build/scripts-3.7
2019-07-16T11:12:19   copying and adjusting scripts/dms2_batch_fracsurvive -> build/scripts-3.7
2019-07-16T11:12:19   copying and adjusting scripts/dms2_logoplot -> build/scripts-3.7
2019-07-16T11:12:19   changing mode of build/scripts-3.7/dms2_bcsubamp from 644 to 755
2019-07-16T11:12:19   changing mode of build/scripts-3.7/dms2_batch_bcsubamp from 644 to 755
2019-07-16T11:12:19   changing mode of build/scripts-3.7/dms2_prefs from 644 to 755
2019-07-16T11:12:19   changing mode of build/scripts-3.7/dms2_batch_prefs from 644 to 755
2019-07-16T11:12:19   changing mode of build/scripts-3.7/dms2_diffsel from 644 to 755
2019-07-16T11:12:19   changing mode of build/scripts-3.7/dms2_batch_diffsel from 644 to 755
2019-07-16T11:12:19   changing mode of build/scripts-3.7/dms2_fracsurvive from 644 to 755
2019-07-16T11:12:19   changing mode of build/scripts-3.7/dms2_batch_fracsurvive from 644 to 755
2019-07-16T11:12:19   changing mode of build/scripts-3.7/dms2_logoplot from 644 to 755
2019-07-16T11:12:19   installing to build/bdist.linux-armv7l/wheel
2019-07-16T11:12:19   running install
2019-07-16T11:12:19   running install_lib
2019-07-16T11:12:19   creating build/bdist.linux-armv7l
2019-07-16T11:12:19   creating build/bdist.linux-armv7l/wheel
2019-07-16T11:12:19   creating build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/codonvarianttable.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/rplot_Rcode.R -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/rplot.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/dssp.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/_metadata.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/_cutils.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/protstruct.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/pacbio.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/diffsel.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/sra.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/plot.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/__init__.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/prefs.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/barcodes.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/neutcurve.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/ipython_utils.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/fracsurvive.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/compareprefs.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/parseargs.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/seqnumbering.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/minimap2.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:19   copying build/lib.linux-armv7l-3.7/dms_tools2/utils.py -> build/bdist.linux-armv7l/wheel/dms_tools2
2019-07-16T11:12:20   running install_egg_info
2019-07-16T11:12:20   running egg_info
2019-07-16T11:12:20   writing dms_tools2.egg-info/PKG-INFO
2019-07-16T11:12:20   writing dependency_links to dms_tools2.egg-info/dependency_links.txt
2019-07-16T11:12:20   writing requirements to dms_tools2.egg-info/requires.txt
2019-07-16T11:12:20   writing top-level names to dms_tools2.egg-info/top_level.txt
2019-07-16T11:12:20   reading manifest file 'dms_tools2.egg-info/SOURCES.txt'
2019-07-16T11:12:20   reading manifest template 'MANIFEST.in'
2019-07-16T11:12:20   writing manifest file 'dms_tools2.egg-info/SOURCES.txt'
2019-07-16T11:12:20   Copying dms_tools2.egg-info to build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3-py3.7.egg-info
2019-07-16T11:12:20   running install_scripts
2019-07-16T11:12:20   creating build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data
2019-07-16T11:12:20   creating build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   copying build/scripts-3.7/dms2_diffsel -> build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   copying build/scripts-3.7/dms2_batch_prefs -> build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   copying build/scripts-3.7/dms2_bcsubamp -> build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   copying build/scripts-3.7/dms2_batch_bcsubamp -> build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   copying build/scripts-3.7/dms2_batch_diffsel -> build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   copying build/scripts-3.7/dms2_batch_fracsurvive -> build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   copying build/scripts-3.7/dms2_fracsurvive -> build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   copying build/scripts-3.7/dms2_logoplot -> build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   copying build/scripts-3.7/dms2_prefs -> build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts
2019-07-16T11:12:20   changing mode of build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts/dms2_diffsel to 755
2019-07-16T11:12:20   changing mode of build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts/dms2_batch_prefs to 755
2019-07-16T11:12:20   changing mode of build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts/dms2_bcsubamp to 755
2019-07-16T11:12:20   changing mode of build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts/dms2_batch_bcsubamp to 755
2019-07-16T11:12:20   changing mode of build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts/dms2_batch_diffsel to 755
2019-07-16T11:12:20   changing mode of build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts/dms2_batch_fracsurvive to 755
2019-07-16T11:12:20   changing mode of build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts/dms2_fracsurvive to 755
2019-07-16T11:12:20   changing mode of build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts/dms2_logoplot to 755
2019-07-16T11:12:20   changing mode of build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.data/scripts/dms2_prefs to 755
2019-07-16T11:12:20   adding license file "LICENSE.txt" (matched pattern "LICEN[CS]E*")
2019-07-16T11:12:20   creating build/bdist.linux-armv7l/wheel/dms_tools2-2.4.3.dist-info/WHEEL
2019-07-16T11:12:20   creating '/tmp/pip-wheel-fluoh5bf/dms_tools2-2.4.3-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2019-07-16T11:12:20   adding 'dms_tools2/__init__.py'
2019-07-16T11:12:20   adding 'dms_tools2/_cutils.cpython-37m-arm-linux-gnueabihf.so'
2019-07-16T11:12:20   adding 'dms_tools2/_metadata.py'
2019-07-16T11:12:20   adding 'dms_tools2/barcodes.py'
2019-07-16T11:12:20   adding 'dms_tools2/codonvarianttable.py'
2019-07-16T11:12:20   adding 'dms_tools2/compareprefs.py'
2019-07-16T11:12:20   adding 'dms_tools2/diffsel.py'
2019-07-16T11:12:20   adding 'dms_tools2/dssp.py'
2019-07-16T11:12:20   adding 'dms_tools2/fracsurvive.py'
2019-07-16T11:12:20   adding 'dms_tools2/ipython_utils.py'
2019-07-16T11:12:20   adding 'dms_tools2/minimap2.py'
2019-07-16T11:12:20   adding 'dms_tools2/neutcurve.py'
2019-07-16T11:12:20   adding 'dms_tools2/pacbio.py'
2019-07-16T11:12:20   adding 'dms_tools2/parseargs.py'
2019-07-16T11:12:20   adding 'dms_tools2/plot.py'
2019-07-16T11:12:20   adding 'dms_tools2/prefs.py'
2019-07-16T11:12:20   adding 'dms_tools2/protstruct.py'
2019-07-16T11:12:20   adding 'dms_tools2/rplot.py'
2019-07-16T11:12:20   adding 'dms_tools2/rplot_Rcode.R'
2019-07-16T11:12:20   adding 'dms_tools2/seqnumbering.py'
2019-07-16T11:12:20   adding 'dms_tools2/sra.py'
2019-07-16T11:12:20   adding 'dms_tools2/utils.py'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.data/scripts/dms2_batch_bcsubamp'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.data/scripts/dms2_batch_diffsel'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.data/scripts/dms2_batch_fracsurvive'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.data/scripts/dms2_batch_prefs'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.data/scripts/dms2_bcsubamp'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.data/scripts/dms2_diffsel'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.data/scripts/dms2_fracsurvive'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.data/scripts/dms2_logoplot'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.data/scripts/dms2_prefs'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.dist-info/LICENSE.txt'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.dist-info/METADATA'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.dist-info/WHEEL'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.dist-info/top_level.txt'
2019-07-16T11:12:20   adding 'dms_tools2-2.4.3.dist-info/RECORD'
2019-07-16T11:12:20   removing build/bdist.linux-armv7l/wheel
2019-07-16T11:12:20   Building wheel for dms-tools2 (setup.py): finished with status 'done'
2019-07-16T11:12:20   Stored in directory: /tmp/tmp8l5_gf1a
2019-07-16T11:12:20 Successfully built dms-tools2
2019-07-16T11:12:20 Cleaning up...
2019-07-16T11:12:20   Removing source in /tmp/pip-wheel-o64jclgx/dms-tools2
2019-07-16T11:12:20 Removed build tracker '/tmp/pip-req-tracker-d4kt31gv'