2020-02-25T14:56:45,632 Created temporary directory: /tmp/pip-ephem-wheel-cache-20vqk_54
2020-02-25T14:56:45,635 Created temporary directory: /tmp/pip-req-tracker-7k_tmo5d
2020-02-25T14:56:45,636 Initialized build tracking at /tmp/pip-req-tracker-7k_tmo5d
2020-02-25T14:56:45,637 Created build tracker: /tmp/pip-req-tracker-7k_tmo5d
2020-02-25T14:56:45,637 Entered build tracker: /tmp/pip-req-tracker-7k_tmo5d
2020-02-25T14:56:45,638 Created temporary directory: /tmp/pip-wheel-zbvw7nte
2020-02-25T14:56:45,643 1 location(s) to search for versions of segmentation-phenix:
2020-02-25T14:56:45,643 * https://pypi.org/simple/segmentation-phenix/
2020-02-25T14:56:45,644 Fetching project page and analyzing links: https://pypi.org/simple/segmentation-phenix/
2020-02-25T14:56:45,644 Getting page https://pypi.org/simple/segmentation-phenix/
2020-02-25T14:56:45,647 Found index url https://pypi.org/simple
2020-02-25T14:56:45,650 Getting credentials from keyring for https://pypi.org/simple
2020-02-25T14:56:45,650 Getting credentials from keyring for pypi.org
2020-02-25T14:56:45,826   Found link https://files.pythonhosted.org/packages/30/6c/d50d13cc8a0f6e83dfcf9ee1759ba9932bd77b4e9a9d78ba0f507744ac37/segmentation_phenix-0.1.0.tar.gz#sha256=0297338fe049caf8d12f868f23ba91311c801e32a232c91a5ab2037e3f2a0efb (from https://pypi.org/simple/segmentation-phenix/), version: 0.1.0
2020-02-25T14:56:45,832 Given no hashes to check 1 links for project 'segmentation-phenix': discarding no candidates
2020-02-25T14:56:45,833 Using version 0.1.0 (newest of versions: 0.1.0)
2020-02-25T14:56:45,838 Collecting segmentation-phenix==0.1.0
2020-02-25T14:56:45,841   Created temporary directory: /tmp/pip-unpack-kh2kop7e
2020-02-25T14:56:45,843   Getting credentials from keyring for files.pythonhosted.org
2020-02-25T14:56:45,937   Downloading segmentation_phenix-0.1.0.tar.gz (17 kB)
2020-02-25T14:56:46,011   Added segmentation-phenix==0.1.0 from https://files.pythonhosted.org/packages/30/6c/d50d13cc8a0f6e83dfcf9ee1759ba9932bd77b4e9a9d78ba0f507744ac37/segmentation_phenix-0.1.0.tar.gz#sha256=0297338fe049caf8d12f868f23ba91311c801e32a232c91a5ab2037e3f2a0efb to build tracker '/tmp/pip-req-tracker-7k_tmo5d'
2020-02-25T14:56:46,013     Running setup.py (path:/tmp/pip-wheel-zbvw7nte/segmentation-phenix/setup.py) egg_info for package segmentation-phenix
2020-02-25T14:56:46,014     Running command python setup.py egg_info
2020-02-25T14:56:50,223     running egg_info
2020-02-25T14:56:50,228     creating /tmp/pip-wheel-zbvw7nte/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info
2020-02-25T14:56:50,230     writing /tmp/pip-wheel-zbvw7nte/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/PKG-INFO
2020-02-25T14:56:50,235     writing dependency_links to /tmp/pip-wheel-zbvw7nte/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/dependency_links.txt
2020-02-25T14:56:50,239     writing requirements to /tmp/pip-wheel-zbvw7nte/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/requires.txt
2020-02-25T14:56:50,242     writing top-level names to /tmp/pip-wheel-zbvw7nte/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/top_level.txt
2020-02-25T14:56:50,245     writing manifest file '/tmp/pip-wheel-zbvw7nte/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/SOURCES.txt'
2020-02-25T14:56:50,480     reading manifest file '/tmp/pip-wheel-zbvw7nte/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/SOURCES.txt'
2020-02-25T14:56:50,483     reading manifest template 'MANIFEST.in'
2020-02-25T14:56:50,488     warning: no files found matching '*' under directory 'data'
2020-02-25T14:56:50,495     writing manifest file '/tmp/pip-wheel-zbvw7nte/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/SOURCES.txt'
2020-02-25T14:56:50,658   Source in /tmp/pip-wheel-zbvw7nte/segmentation-phenix has version 0.1.0, which satisfies requirement segmentation-phenix==0.1.0 from https://files.pythonhosted.org/packages/30/6c/d50d13cc8a0f6e83dfcf9ee1759ba9932bd77b4e9a9d78ba0f507744ac37/segmentation_phenix-0.1.0.tar.gz#sha256=0297338fe049caf8d12f868f23ba91311c801e32a232c91a5ab2037e3f2a0efb
2020-02-25T14:56:50,660   Removed segmentation-phenix==0.1.0 from https://files.pythonhosted.org/packages/30/6c/d50d13cc8a0f6e83dfcf9ee1759ba9932bd77b4e9a9d78ba0f507744ac37/segmentation_phenix-0.1.0.tar.gz#sha256=0297338fe049caf8d12f868f23ba91311c801e32a232c91a5ab2037e3f2a0efb from build tracker '/tmp/pip-req-tracker-7k_tmo5d'
2020-02-25T14:56:50,662 Building wheels for collected packages: segmentation-phenix
2020-02-25T14:56:50,670   Created temporary directory: /tmp/pip-wheel-8jwgu3ev
2020-02-25T14:56:50,670   Building wheel for segmentation-phenix (setup.py): started
2020-02-25T14:56:50,671   Destination directory: /tmp/pip-wheel-8jwgu3ev
2020-02-25T14:56:50,671   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-zbvw7nte/segmentation-phenix/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-zbvw7nte/segmentation-phenix/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8jwgu3ev
2020-02-25T14:56:52,734   running bdist_wheel
2020-02-25T14:56:52,741   running build
2020-02-25T14:56:52,742   running build_py
2020-02-25T14:56:52,958   creating build
2020-02-25T14:56:52,958   creating build/lib.linux-armv7l-3.7
2020-02-25T14:56:52,981   creating build/lib.linux-armv7l-3.7/segmentation_phenix
2020-02-25T14:56:52,984   copying segmentation_phenix/__init__.py -> build/lib.linux-armv7l-3.7/segmentation_phenix
2020-02-25T14:56:52,989   running build_ext
2020-02-25T14:56:53,111   cythoning segmentation_phenix/segmentation.pyx to segmentation_phenix/segmentation.cpp
2020-02-25T14:56:54,205   /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-zbvw7nte/segmentation-phenix/segmentation_phenix/segmentation.pyx
2020-02-25T14:56:54,206     tree = Parsing.p_module(s, pxd, full_module_name)
2020-02-25T14:57:00,345   building 'segmentation_phenix.segmentation' extension
2020-02-25T14:57:00,346   creating build/temp.linux-armv7l-3.7
2020-02-25T14:57:00,347   creating build/temp.linux-armv7l-3.7/segmentation_phenix
2020-02-25T14:57:00,349   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/python3.7m -c segmentation_phenix/segmentation.cpp -o build/temp.linux-armv7l-3.7/segmentation_phenix/segmentation.o -march=native -std=c++11 -DNDEBUG -Ofast -Wcpp
2020-02-25T14:57:00,867   In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2020-02-25T14:57:00,868                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2020-02-25T14:57:00,868                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2020-02-25T14:57:00,868                    from segmentation_phenix/segmentation.cpp:627:
2020-02-25T14:57:00,869   /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2020-02-25T14:57:00,869    #warning "Using deprecated NumPy API, disable it with " \
2020-02-25T14:57:00,870     ^~~~~~~
2020-02-25T14:57:00,922   In file included from segmentation_phenix/segmentation.cpp:629:
2020-02-25T14:57:00,923   segmentation_phenix/fastmm.cpp:1:10: fatal error: boost/multi_array.hpp: No such file or directory
2020-02-25T14:57:00,923    #include <boost/multi_array.hpp>
2020-02-25T14:57:00,923             ^~~~~~~~~~~~~~~~~~~~~~~
2020-02-25T14:57:00,924   compilation terminated.
2020-02-25T14:57:00,929   error: command 'arm-linux-gnueabihf-gcc' failed with exit status 1
2020-02-25T14:57:01,660   Building wheel for segmentation-phenix (setup.py): finished with status 'error'
2020-02-25T14:57:01,660   ERROR: Failed building wheel for segmentation-phenix
2020-02-25T14:57:01,661   Running setup.py clean for segmentation-phenix
2020-02-25T14:57:01,662   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-zbvw7nte/segmentation-phenix/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-zbvw7nte/segmentation-phenix/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2020-02-25T14:57:03,806   running clean
2020-02-25T14:57:03,810   removing 'build/temp.linux-armv7l-3.7' (and everything under it)
2020-02-25T14:57:03,813   removing 'build/lib.linux-armv7l-3.7' (and everything under it)
2020-02-25T14:57:03,817   'build/bdist.linux-armv7l' does not exist -- can't clean it
2020-02-25T14:57:03,818   'build/scripts-3.7' does not exist -- can't clean it
2020-02-25T14:57:03,818   removing 'build'
2020-02-25T14:57:03,967 Failed to build segmentation-phenix
2020-02-25T14:57:03,967 Cleaning up...
2020-02-25T14:57:03,968   Removing source in /tmp/pip-wheel-zbvw7nte/segmentation-phenix
2020-02-25T14:57:03,997 Removed build tracker: '/tmp/pip-req-tracker-7k_tmo5d'
2020-02-25T14:57:04,001 ERROR: Failed to build one or more wheels
2020-02-25T14:57:04,002 Exception information:
2020-02-25T14:57:04,002 Traceback (most recent call last):
2020-02-25T14:57:04,002   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 186, in _main
2020-02-25T14:57:04,002     status = self.run(options, args)
2020-02-25T14:57:04,002   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 189, in run
2020-02-25T14:57:04,002     "Failed to build one or more wheels"
2020-02-25T14:57:04,002 pip._internal.exceptions.CommandError: Failed to build one or more wheels