2020-03-03T15:07:55,887 Created temporary directory: /tmp/pip-ephem-wheel-cache-b18m8go3
2020-03-03T15:07:55,890 Created temporary directory: /tmp/pip-req-tracker-lhoxwq4e
2020-03-03T15:07:55,891 Initialized build tracking at /tmp/pip-req-tracker-lhoxwq4e
2020-03-03T15:07:55,891 Created build tracker: /tmp/pip-req-tracker-lhoxwq4e
2020-03-03T15:07:55,892 Entered build tracker: /tmp/pip-req-tracker-lhoxwq4e
2020-03-03T15:07:55,893 Created temporary directory: /tmp/pip-wheel-9k6nseg5
2020-03-03T15:07:55,898 1 location(s) to search for versions of segmentation-phenix:
2020-03-03T15:07:55,898 * https://pypi.org/simple/segmentation-phenix/
2020-03-03T15:07:55,898 Fetching project page and analyzing links: https://pypi.org/simple/segmentation-phenix/
2020-03-03T15:07:55,899 Getting page https://pypi.org/simple/segmentation-phenix/
2020-03-03T15:07:55,901 Found index url https://pypi.org/simple
2020-03-03T15:07:55,904 Getting credentials from keyring for https://pypi.org/simple
2020-03-03T15:07:55,904 Getting credentials from keyring for pypi.org
2020-03-03T15:07:56,080   Found link https://files.pythonhosted.org/packages/30/6c/d50d13cc8a0f6e83dfcf9ee1759ba9932bd77b4e9a9d78ba0f507744ac37/segmentation_phenix-0.1.0.tar.gz#sha256=0297338fe049caf8d12f868f23ba91311c801e32a232c91a5ab2037e3f2a0efb (from https://pypi.org/simple/segmentation-phenix/), version: 0.1.0
2020-03-03T15:07:56,081   Found link https://files.pythonhosted.org/packages/04/55/6543f51023a5dcad42a9b10db8073a826ec9fa0cf14cdca970836d65e317/segmentation_phenix-0.1.1.tar.gz#sha256=28cfed2174ec3aca78133921b7dff41ce99c3fdc42bf9cded9d1e3c4d2ca8881 (from https://pypi.org/simple/segmentation-phenix/), version: 0.1.1
2020-03-03T15:07:56,082   Found link https://files.pythonhosted.org/packages/74/d8/f0734acbe90d53afdc8d297676992794fe5c0042e84aef81f9e886fe2135/segmentation_phenix-0.1.2.tar.gz#sha256=afad67ba5fdacbeeff7594578a39fcf7828e4961c7bff7483ac98ed18d544d6b (from https://pypi.org/simple/segmentation-phenix/), version: 0.1.2
2020-03-03T15:07:56,088 Given no hashes to check 1 links for project 'segmentation-phenix': discarding no candidates
2020-03-03T15:07:56,089 Using version 0.1.2 (newest of versions: 0.1.2)
2020-03-03T15:07:56,094 Collecting segmentation-phenix==0.1.2
2020-03-03T15:07:56,097   Created temporary directory: /tmp/pip-unpack-qktz5dxh
2020-03-03T15:07:56,099   Getting credentials from keyring for files.pythonhosted.org
2020-03-03T15:07:56,184   Downloading segmentation_phenix-0.1.2.tar.gz (17 kB)
2020-03-03T15:07:56,259   Added segmentation-phenix==0.1.2 from https://files.pythonhosted.org/packages/74/d8/f0734acbe90d53afdc8d297676992794fe5c0042e84aef81f9e886fe2135/segmentation_phenix-0.1.2.tar.gz#sha256=afad67ba5fdacbeeff7594578a39fcf7828e4961c7bff7483ac98ed18d544d6b to build tracker '/tmp/pip-req-tracker-lhoxwq4e'
2020-03-03T15:07:56,261     Running setup.py (path:/tmp/pip-wheel-9k6nseg5/segmentation-phenix/setup.py) egg_info for package segmentation-phenix
2020-03-03T15:07:56,262     Running command python setup.py egg_info
2020-03-03T15:08:00,726     running egg_info
2020-03-03T15:08:00,731     creating /tmp/pip-wheel-9k6nseg5/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info
2020-03-03T15:08:00,732     writing /tmp/pip-wheel-9k6nseg5/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/PKG-INFO
2020-03-03T15:08:00,736     writing dependency_links to /tmp/pip-wheel-9k6nseg5/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/dependency_links.txt
2020-03-03T15:08:00,740     writing requirements to /tmp/pip-wheel-9k6nseg5/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/requires.txt
2020-03-03T15:08:00,742     writing top-level names to /tmp/pip-wheel-9k6nseg5/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/top_level.txt
2020-03-03T15:08:00,745     writing manifest file '/tmp/pip-wheel-9k6nseg5/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/SOURCES.txt'
2020-03-03T15:08:00,981     reading manifest file '/tmp/pip-wheel-9k6nseg5/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/SOURCES.txt'
2020-03-03T15:08:00,983     reading manifest template 'MANIFEST.in'
2020-03-03T15:08:00,987     warning: no files found matching '*' under directory 'data'
2020-03-03T15:08:00,994     writing manifest file '/tmp/pip-wheel-9k6nseg5/segmentation-phenix/pip-egg-info/segmentation_phenix.egg-info/SOURCES.txt'
2020-03-03T15:08:01,156   Source in /tmp/pip-wheel-9k6nseg5/segmentation-phenix has version 0.1.2, which satisfies requirement segmentation-phenix==0.1.2 from https://files.pythonhosted.org/packages/74/d8/f0734acbe90d53afdc8d297676992794fe5c0042e84aef81f9e886fe2135/segmentation_phenix-0.1.2.tar.gz#sha256=afad67ba5fdacbeeff7594578a39fcf7828e4961c7bff7483ac98ed18d544d6b
2020-03-03T15:08:01,157   Removed segmentation-phenix==0.1.2 from https://files.pythonhosted.org/packages/74/d8/f0734acbe90d53afdc8d297676992794fe5c0042e84aef81f9e886fe2135/segmentation_phenix-0.1.2.tar.gz#sha256=afad67ba5fdacbeeff7594578a39fcf7828e4961c7bff7483ac98ed18d544d6b from build tracker '/tmp/pip-req-tracker-lhoxwq4e'
2020-03-03T15:08:01,160 Building wheels for collected packages: segmentation-phenix
2020-03-03T15:08:01,166   Created temporary directory: /tmp/pip-wheel-3az4ks_w
2020-03-03T15:08:01,167   Building wheel for segmentation-phenix (setup.py): started
2020-03-03T15:08:01,168   Destination directory: /tmp/pip-wheel-3az4ks_w
2020-03-03T15:08:01,168   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9k6nseg5/segmentation-phenix/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9k6nseg5/segmentation-phenix/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-3az4ks_w
2020-03-03T15:08:03,460   running bdist_wheel
2020-03-03T15:08:03,468   running build
2020-03-03T15:08:03,469   running build_py
2020-03-03T15:08:03,688   creating build
2020-03-03T15:08:03,689   creating build/lib.linux-armv7l-3.7
2020-03-03T15:08:03,690   creating build/lib.linux-armv7l-3.7/segmentation_phenix
2020-03-03T15:08:03,692   copying segmentation_phenix/__init__.py -> build/lib.linux-armv7l-3.7/segmentation_phenix
2020-03-03T15:08:03,696   running build_ext
2020-03-03T15:08:03,807   cythoning segmentation_phenix/segmentation.pyx to segmentation_phenix/segmentation.cpp
2020-03-03T15:08:06,293   /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-9k6nseg5/segmentation-phenix/segmentation_phenix/segmentation.pyx
2020-03-03T15:08:06,294     tree = Parsing.p_module(s, pxd, full_module_name)
2020-03-03T15:08:12,845   building 'segmentation_phenix.segmentation' extension
2020-03-03T15:08:12,846   creating build/temp.linux-armv7l-3.7
2020-03-03T15:08:12,847   creating build/temp.linux-armv7l-3.7/segmentation_phenix
2020-03-03T15:08:12,848   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include -I/usr/include/python3.7m -c segmentation_phenix/segmentation.cpp -o build/temp.linux-armv7l-3.7/segmentation_phenix/segmentation.o -march=native -std=c++11 -DNDEBUG -Ofast -Wcpp
2020-03-03T15:08:13,535   In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822,
2020-03-03T15:08:13,536                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2020-03-03T15:08:13,536                    from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
2020-03-03T15:08:13,536                    from segmentation_phenix/segmentation.cpp:627:
2020-03-03T15:08:13,537   /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2020-03-03T15:08:13,537    #warning "Using deprecated NumPy API, disable it with " \
2020-03-03T15:08:13,537     ^~~~~~~
2020-03-03T15:08:13,748   In file included from segmentation_phenix/segmentation.cpp:629:
2020-03-03T15:08:13,749   segmentation_phenix/fastmm.cpp:1:10: fatal error: boost/multi_array.hpp: No such file or directory
2020-03-03T15:08:13,749    #include <boost/multi_array.hpp>
2020-03-03T15:08:13,750             ^~~~~~~~~~~~~~~~~~~~~~~
2020-03-03T15:08:13,750   compilation terminated.
2020-03-03T15:08:13,756   error: command 'arm-linux-gnueabihf-gcc' failed with exit status 1
2020-03-03T15:08:14,491   Building wheel for segmentation-phenix (setup.py): finished with status 'error'
2020-03-03T15:08:14,492   ERROR: Failed building wheel for segmentation-phenix
2020-03-03T15:08:14,493   Running setup.py clean for segmentation-phenix
2020-03-03T15:08:14,493   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9k6nseg5/segmentation-phenix/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9k6nseg5/segmentation-phenix/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2020-03-03T15:08:16,570   running clean
2020-03-03T15:08:16,574   removing 'build/temp.linux-armv7l-3.7' (and everything under it)
2020-03-03T15:08:16,577   removing 'build/lib.linux-armv7l-3.7' (and everything under it)
2020-03-03T15:08:16,580   'build/bdist.linux-armv7l' does not exist -- can't clean it
2020-03-03T15:08:16,581   'build/scripts-3.7' does not exist -- can't clean it
2020-03-03T15:08:16,581   removing 'build'
2020-03-03T15:08:16,729 Failed to build segmentation-phenix
2020-03-03T15:08:16,730 Cleaning up...
2020-03-03T15:08:16,731   Removing source in /tmp/pip-wheel-9k6nseg5/segmentation-phenix
2020-03-03T15:08:16,754 Removed build tracker: '/tmp/pip-req-tracker-lhoxwq4e'
2020-03-03T15:08:16,757 ERROR: Failed to build one or more wheels
2020-03-03T15:08:16,759 Exception information:
2020-03-03T15:08:16,759 Traceback (most recent call last):
2020-03-03T15:08:16,759   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/cli/base_command.py", line 186, in _main
2020-03-03T15:08:16,759     status = self.run(options, args)
2020-03-03T15:08:16,759   File "/usr/local/lib/python3.7/dist-packages/pip/_internal/commands/wheel.py", line 189, in run
2020-03-03T15:08:16,759     "Failed to build one or more wheels"
2020-03-03T15:08:16,759 pip._internal.exceptions.CommandError: Failed to build one or more wheels