2020-05-29T10:35:16,592 Created temporary directory: /tmp/pip-ephem-wheel-cache-311q5dxn 2020-05-29T10:35:16,596 Created temporary directory: /tmp/pip-req-tracker-1yrgcz7g 2020-05-29T10:35:16,597 Initialized build tracking at /tmp/pip-req-tracker-1yrgcz7g 2020-05-29T10:35:16,598 Created build tracker: /tmp/pip-req-tracker-1yrgcz7g 2020-05-29T10:35:16,598 Entered build tracker: /tmp/pip-req-tracker-1yrgcz7g 2020-05-29T10:35:16,600 Created temporary directory: /tmp/pip-wheel-1_kzanao 2020-05-29T10:35:16,614 1 location(s) to search for versions of pystospa: 2020-05-29T10:35:16,614 * https://pypi.org/simple/pystospa/ 2020-05-29T10:35:16,614 Fetching project page and analyzing links: https://pypi.org/simple/pystospa/ 2020-05-29T10:35:16,615 Getting page https://pypi.org/simple/pystospa/ 2020-05-29T10:35:16,618 Found index url https://pypi.org/simple 2020-05-29T10:35:16,857 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/df/eb/98ff92c988983eff94b15e47fec89f1a813f7ec7e32f1d928c89eb291dba/pystospa-2.0.16-cp27-cp27m-manylinux2010_x86_64.whl#sha256=7f25da343e79024bf11d91034b184274dfd70ac401edcfd5da4ff3620c064251 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,858 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/c1/74/fee94f6179982168608b256d05cdb6afa95ed4938882d12a4cdebc3667dd/pystospa-2.0.16-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=548600097a876364d9cd16dfbed6288b3c7d0f145467365d1bb1d96a0be816c0 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,858 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/72/44/0db1ea91a02948b5f5cfc02be0fd22a41a62c31da30ccfb9b5907d37b31c/pystospa-2.0.16-cp34-cp34m-manylinux2010_x86_64.whl#sha256=9bdd4f994e817d7bb4ce022b3adb22a80af9086dda573aa13edd1f1c92d6a3e5 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,859 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/40/4b/6c4d4d851d13c125784d3030da3427c17b2fc9fd857300b1b7dfabb3ed78/pystospa-2.0.16-cp35-cp35m-manylinux2010_x86_64.whl#sha256=fa473524909d5dcee5a53238d028c15979c383952c976d9f07ee914d77be333d (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,859 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/31/66/d222b231b24048772837cf619bd3e33e72dc51e46a87f127078173e910a3/pystospa-2.0.16-cp36-cp36m-manylinux2010_x86_64.whl#sha256=cdb69da7892a1bf0f15667e30fbc592f52ffecf6fa44b44163954101662e7b5f (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,859 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/94/2e/a5e3c5ac3514df57cc5ff7875e9b81e16f159eb2fea2afe2e895653d9e1c/pystospa-2.0.16-cp37-cp37m-manylinux2010_x86_64.whl#sha256=54a8b7288f8043a64891dca40563cad7959f248bb629f5e8db532381b4e4ec6a (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,860 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/89/d9/4088f8de6beea8d5c8b2bb05504b7bdd1253ca83302648cd8bd1c9fc86a7/pystospa-2.0.16-cp38-cp38-manylinux2010_x86_64.whl#sha256=28f5e520e235ddc86aaac5743e3d429c2645c61dbc5862acb51959b03a431e87 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,860 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/c0/2d/1d23b61fee52c79a10aa8960910192c7c4f986d0e7afc82a32e404e85d7c/pystospa-2.0.17-cp27-cp27m-manylinux2010_x86_64.whl#sha256=ffc5a006d3e440b7b5f62379834898fc91f29c733a4a89d42623899f6f71d39e (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,861 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/c1/de/6014596f571c117819ddc0492b82ff2b698e944f7a4ef1f7191320fdcffb/pystospa-2.0.17-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=d7fd11ee0eab1df6869d782f841d5f96d0c2ae826b2a34f9f823af3bdaef6548 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,861 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/15/bd/428b64d66fb43b33474e1c8411ced96d9f1f80bad0a1911fe6f09f185aa9/pystospa-2.0.17-cp34-cp34m-manylinux2010_x86_64.whl#sha256=bda2c0e4856a5549f24801d9c761f11c84ed07c2b23dbee8dc1ff215a9be9f52 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,862 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/11/19/e6df5372bf6239d80a62fc906a1f7bd00fef1945d112ba68e81ed94f6ba6/pystospa-2.0.17-cp35-cp35m-manylinux2010_x86_64.whl#sha256=3b04371f103abe81c51c3ba7f13df7a06324be468d0dae8addf682a47cc6d7ad (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,862 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/d0/72/24a3b1d463014e655a21bb6e05e95733972d5ff69b34c20622269fbbb16e/pystospa-2.0.17-cp36-cp36m-manylinux2010_x86_64.whl#sha256=c55145877cd401577cbedd24652442f4f2f6ca81686090d20214e03b19cf634f (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,863 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/41/fe/b3a5902317800be723a651e2c43ac9d60a051990a049f9a0969787228c64/pystospa-2.0.17-cp37-cp37m-manylinux2010_x86_64.whl#sha256=d31ed522077ae765afd747ad76cef008b98ed307495a1e821aa4a5fb1ab4b8bf (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,863 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/07/dc/06dcad0676a57b9f9ee5276cb7bbd0fc0275f71d9de19a5e694ca9535913/pystospa-2.0.17-cp38-cp38-manylinux2010_x86_64.whl#sha256=093dd6e06ade04ecd78cc61f14f15975f6628ff036ddcda2ecc56f9df4c9958c (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,863 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/1d/e4/66a075adf519520e6434b7474ae41258c9854baa958740019dde04473acc/pystospa-2.0.18-cp27-cp27m-manylinux2010_x86_64.whl#sha256=679543fe7425c1cfef23ad6fb54e6893740d3e37dc4ef473883f378ae3e21a99 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,864 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/94/2c/c6c64c2ca77e50b126d757d507b425ecb002740a34d6fb959d18d0237e16/pystospa-2.0.18-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=723f7d140f21ca6e47e07f0f63ec815a53a9ace7f176e69057752c26b286fe91 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,864 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/af/34/55e1081a22554f8c61cb327b6746b82b161046a91bd4661764d7571c678f/pystospa-2.0.18-cp34-cp34m-manylinux2010_x86_64.whl#sha256=346c4832aaa14c0ebbd927320e78ecd9957da531566db6fea50010c268ca87ac (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,865 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/50/9a/b7bb443bb4762c2c16644b6e57b021916c219d1c8e944dda012faa51b404/pystospa-2.0.18-cp35-cp35m-manylinux2010_x86_64.whl#sha256=df151d58de733baa92a5bbeb14d2185fe26979d936dce6a0d0f007eca1411c11 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,865 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/05/fb/bfd8f67726e41ddc8ab174777dfdb1cd9adb5697c5018bebd632dd860d58/pystospa-2.0.18-cp36-cp36m-manylinux2010_x86_64.whl#sha256=8fecf92014ef7ca9eb709f266a9c6068846d20c6ff9399f767ef4a52e27b6be3 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,866 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/05/90/472cb189690849c5458ac4bd82846d04fe79ab7b52595c55c0dc02ab65dd/pystospa-2.0.18-cp37-cp37m-manylinux2010_x86_64.whl#sha256=180dbf5ab19d9e6740e1ace5022845628f03bc734ae92582effca437b0cbba61 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,866 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/ec/3f/c08a212e804f0e2eb3cf92f99a8d2bc99621072ddb61654ebde52c1a1136/pystospa-2.0.18-cp38-cp38-manylinux2010_x86_64.whl#sha256=43bfad8f094e06aa103dfc4b5fc7cbd8f0cbca8465e6e4e36b4db73821c75276 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,867 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/b0/dd/0701056ea3ac5558f4edc6c926e3e2db700b04cfa510e16b282cf919e47a/pystospa-2.0.19-cp27-cp27m-manylinux2010_x86_64.whl#sha256=2e7f1959a8f5ea26057ea711c7867e52a9e7c4de438294a7938b751ee16b6f9c (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,867 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/f4/b4/f08334cd27803fffaf92693fed604fbb2a4544dff08153c471be43ea0c39/pystospa-2.0.19-cp27-cp27mu-manylinux2010_x86_64.whl#sha256=f4cd11df6aac0766b9945ad6475c20b43d6158bee619b1501b31eec1f61e4a40 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,868 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/0e/61/1bc6e52016a6d35f4f78852269386937f4d784d788612d236a640c8f89bb/pystospa-2.0.19-cp34-cp34m-manylinux2010_x86_64.whl#sha256=63e8a4fa8e057e23a967e3eec8747fc2c69a24077a5f65182e805b87b995c1c6 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,868 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/f8/1a/01744473134d0167bb4d322b2220ca3032ef6dd3b5eba48fb13ce9d6a6df/pystospa-2.0.19-cp35-cp35m-manylinux2010_x86_64.whl#sha256=a91abdaee9fc92f3c9b36c4b3ebad25b21643251acf484fe583b25b04dc4bdc8 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,869 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/f5/5d/b786d0cd97cb7a5970d9b0e3f868ef32fc3a250a6fd884e478f9cfaf365f/pystospa-2.0.19-cp36-cp36m-manylinux2010_x86_64.whl#sha256=91a68528516bcc15e3efdcd34a1f585f771eacb4a198211b35aa2acb4ef50bc4 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,869 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/ad/7f/85051ae28e3abac50d8d005d5cb3c484df62570d5e4a2ef9280458af8c6e/pystospa-2.0.19-cp37-cp37m-manylinux2010_x86_64.whl#sha256=886a677f9892034d4819dbb3d2c2bc2dc82b773f9620047ce72332d3218b490e (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,870 Skipping link: No binaries permitted for pystospa: https://files.pythonhosted.org/packages/bd/a0/ed25144ff5911f42e5b8f3cdc2031a1c15c22eb90eb40c6d952d6c0da7df/pystospa-2.0.19-cp38-cp38-manylinux2010_x86_64.whl#sha256=6222d1f3b46684bc79ff58f8afad885c610ab1975adf6313f48d1aee37cbab66 (from https://pypi.org/simple/pystospa/) 2020-05-29T10:35:16,870 Found link https://files.pythonhosted.org/packages/d3/80/6926351910fec0ac1fdc591cedd504f902fa13e6d8c6f4e2e6dc968b1e9c/pystospa-2.0.19.tar.gz#sha256=4babc4a261bed891addd0298f97b0ab7331dbe227fa1355b9b2a1a825744a253 (from https://pypi.org/simple/pystospa/), version: 2.0.19 2020-05-29T10:35:16,871 Found link https://files.pythonhosted.org/packages/9d/34/dbcf1a0a4398f3a941f46f2cdac607e0f44f2352789a4cd8783e02b5cc50/pystospa-2.0.20.tar.gz#sha256=094c4581068201e4390682e6e3d53011ecfc9afdb7d83269c296d13969315ed5 (from https://pypi.org/simple/pystospa/), version: 2.0.20 2020-05-29T10:35:16,872 Found link https://files.pythonhosted.org/packages/8a/bf/30d9e819cc495da0063bbd1d6904456ce0f0c18f245a62f6ae1b378e83cc/pystospa-2.0.21.tar.gz#sha256=0fd6192b8a497b11d24f1eb12009e645665ee4ac28968736e884619fa69cd9af (from https://pypi.org/simple/pystospa/), version: 2.0.21 2020-05-29T10:35:16,872 Found link https://files.pythonhosted.org/packages/71/3d/03d0e48a94274fd51de06d09430232cb0433918eaf5597e5351b4932f373/pystospa-2.0.22.tar.gz#sha256=09ca9bc9fa0c252b5c160a678927b142f4d0942b82634f51d7c36049d78b2255 (from https://pypi.org/simple/pystospa/), version: 2.0.22 2020-05-29T10:35:16,873 Found link https://files.pythonhosted.org/packages/54/d6/a177b8539ebe5b01963497b8de858282f6badb6e3dc995f2be9a99ffb2b3/pystospa-2.0.23.tar.gz#sha256=316fe680dc71b6e9fb88e436123e06fc0b64217a8beebff9402c9da6fa3c421a (from https://pypi.org/simple/pystospa/), version: 2.0.23 2020-05-29T10:35:16,873 Found link https://files.pythonhosted.org/packages/c2/e0/99e4662c1e640613414d83dd49aecebfd36043005bc96ca9ebfaec5d80e8/pystospa-2.0.24.tar.gz#sha256=b3efac5cab57b831f601782335bf11947e0359e524ac1b523370eafa771f6d63 (from https://pypi.org/simple/pystospa/), version: 2.0.24 2020-05-29T10:35:16,874 Found link https://files.pythonhosted.org/packages/08/a6/eb086fa38b1bbbfe3b38e30dca9edccea243d5b289cdf6fab252dcd7f395/pystospa-2.0.25.tar.gz#sha256=6c24ea172ad884b196c9681b13f525f8325f6b74d6952cb3236ae85b95b4b066 (from https://pypi.org/simple/pystospa/), version: 2.0.25 2020-05-29T10:35:16,875 Found link https://files.pythonhosted.org/packages/49/ff/2b59477c3ea749ca2bbf2df9dc90b8b88ae36fc05640542ba08bf9e2cd81/pystospa-2.0.26.tar.gz#sha256=095516ce19462cc439fcc9bd9bceeaa376de011e50b9e6b15a2305c648f0ced7 (from https://pypi.org/simple/pystospa/), version: 2.0.26 2020-05-29T10:35:16,875 Found link https://files.pythonhosted.org/packages/fe/a9/557434aa9f673aa47828bde1abd7d3f38bbf3a7fc1dfd621953c8ec8b956/pystospa-2.0.28.tar.gz#sha256=d351e16fecb3b5732425266dc25017ae5ba4efcbe85413bccf8173ef131f8457 (from https://pypi.org/simple/pystospa/), version: 2.0.28 2020-05-29T10:35:16,886 Given no hashes to check 1 links for project 'pystospa': discarding no candidates 2020-05-29T10:35:16,887 Using version 2.0.28 (newest of versions: 2.0.28) 2020-05-29T10:35:16,893 Collecting pystospa==2.0.28 2020-05-29T10:35:16,896 Created temporary directory: /tmp/pip-unpack-vxyadaz2 2020-05-29T10:35:16,980 Downloading pystospa-2.0.28.tar.gz (752 kB) 2020-05-29T10:35:18,788 Added pystospa==2.0.28 from https://files.pythonhosted.org/packages/fe/a9/557434aa9f673aa47828bde1abd7d3f38bbf3a7fc1dfd621953c8ec8b956/pystospa-2.0.28.tar.gz#sha256=d351e16fecb3b5732425266dc25017ae5ba4efcbe85413bccf8173ef131f8457 to build tracker '/tmp/pip-req-tracker-1yrgcz7g' 2020-05-29T10:35:18,790 Running setup.py (path:/tmp/pip-wheel-1_kzanao/pystospa/setup.py) egg_info for package pystospa 2020-05-29T10:35:18,792 Created temporary directory: /tmp/pip-pip-egg-info-gdt6kz_o 2020-05-29T10:35:18,792 Running command python setup.py egg_info 2020-05-29T11:57:40,063 running egg_info 2020-05-29T11:57:40,068 creating /tmp/pip-pip-egg-info-gdt6kz_o/pystospa.egg-info 2020-05-29T11:57:40,070 writing /tmp/pip-pip-egg-info-gdt6kz_o/pystospa.egg-info/PKG-INFO 2020-05-29T11:57:40,077 writing dependency_links to /tmp/pip-pip-egg-info-gdt6kz_o/pystospa.egg-info/dependency_links.txt 2020-05-29T11:57:40,084 writing top-level names to /tmp/pip-pip-egg-info-gdt6kz_o/pystospa.egg-info/top_level.txt 2020-05-29T11:57:40,089 writing manifest file '/tmp/pip-pip-egg-info-gdt6kz_o/pystospa.egg-info/SOURCES.txt' 2020-05-29T11:57:40,097 package init file 'pystospa/__init__.py' not found (or not a regular file) 2020-05-29T11:57:40,102 reading manifest file '/tmp/pip-pip-egg-info-gdt6kz_o/pystospa.egg-info/SOURCES.txt' 2020-05-29T11:57:40,109 writing manifest file '/tmp/pip-pip-egg-info-gdt6kz_o/pystospa.egg-info/SOURCES.txt' 2020-05-29T11:57:40,293 Source in /tmp/pip-wheel-1_kzanao/pystospa has version 2.0.28, which satisfies requirement pystospa==2.0.28 from https://files.pythonhosted.org/packages/fe/a9/557434aa9f673aa47828bde1abd7d3f38bbf3a7fc1dfd621953c8ec8b956/pystospa-2.0.28.tar.gz#sha256=d351e16fecb3b5732425266dc25017ae5ba4efcbe85413bccf8173ef131f8457 2020-05-29T11:57:40,295 Removed pystospa==2.0.28 from https://files.pythonhosted.org/packages/fe/a9/557434aa9f673aa47828bde1abd7d3f38bbf3a7fc1dfd621953c8ec8b956/pystospa-2.0.28.tar.gz#sha256=d351e16fecb3b5732425266dc25017ae5ba4efcbe85413bccf8173ef131f8457 from build tracker '/tmp/pip-req-tracker-1yrgcz7g' 2020-05-29T11:57:40,299 Building wheels for collected packages: pystospa 2020-05-29T11:57:40,308 Created temporary directory: /tmp/pip-wheel-dthh0x8z 2020-05-29T11:57:40,309 Building wheel for pystospa (setup.py): started 2020-05-29T11:57:40,310 Destination directory: /tmp/pip-wheel-dthh0x8z 2020-05-29T11:57:40,311 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-1_kzanao/pystospa/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-1_kzanao/pystospa/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-dthh0x8z 2020-05-29T11:57:44,360 -------------------------------------------------------------------------------- 2020-05-29T11:57:44,360 -- Trying "Ninja" generator 2020-05-29T11:57:44,361 -------------------------------- 2020-05-29T11:57:44,361 --------------------------- 2020-05-29T11:57:44,361 ---------------------- 2020-05-29T11:57:44,362 ----------------- 2020-05-29T11:57:44,363 ------------ 2020-05-29T11:57:44,363 ------- 2020-05-29T11:57:44,364 -- 2020-05-29T11:57:44,401 Not searching for unused variables given on the command line. 2020-05-29T11:57:44,467 CMake Error: CMake was unable to find a build program corresponding to "Ninja". CMAKE_MAKE_PROGRAM is not set. You probably need to select a different build tool. 2020-05-29T11:57:44,471 -- Configuring incomplete, errors occurred! 2020-05-29T11:57:44,472 See also "/tmp/pip-wheel-1_kzanao/pystospa/_cmake_test_compile/build/CMakeFiles/CMakeOutput.log". 2020-05-29T11:57:44,483 -- 2020-05-29T11:57:44,484 ------- 2020-05-29T11:57:44,484 ------------ 2020-05-29T11:57:44,485 ----------------- 2020-05-29T11:57:44,485 ---------------------- 2020-05-29T11:57:44,486 --------------------------- 2020-05-29T11:57:44,486 -------------------------------- 2020-05-29T11:57:44,486 -- Trying "Ninja" generator - failure 2020-05-29T11:57:44,487 -------------------------------------------------------------------------------- 2020-05-29T11:57:44,489 -------------------------------------------------------------------------------- 2020-05-29T11:57:44,489 -- Trying "Unix Makefiles" generator 2020-05-29T11:57:44,490 -------------------------------- 2020-05-29T11:57:44,490 --------------------------- 2020-05-29T11:57:44,491 ---------------------- 2020-05-29T11:57:44,491 ----------------- 2020-05-29T11:57:44,491 ------------ 2020-05-29T11:57:44,492 ------- 2020-05-29T11:57:44,492 -- 2020-05-29T11:57:44,525 Not searching for unused variables given on the command line. 2020-05-29T11:57:45,109 -- The C compiler identification is GNU 8.3.0 2020-05-29T11:57:45,191 -- Check for working C compiler: /usr/bin/cc 2020-05-29T11:57:45,760 -- Check for working C compiler: /usr/bin/cc - works 2020-05-29T11:57:45,774 -- Detecting C compiler ABI info 2020-05-29T11:57:46,338 -- Detecting C compiler ABI info - done 2020-05-29T11:57:46,452 -- Detecting C compile features 2020-05-29T11:57:46,456 -- Detecting C compile features - done 2020-05-29T11:57:47,173 -- The CXX compiler identification is GNU 8.3.0 2020-05-29T11:57:47,226 -- Check for working CXX compiler: /usr/bin/c++ 2020-05-29T11:57:48,005 -- Check for working CXX compiler: /usr/bin/c++ - works 2020-05-29T11:57:48,023 -- Detecting CXX compiler ABI info 2020-05-29T11:57:48,798 -- Detecting CXX compiler ABI info - done 2020-05-29T11:57:48,920 -- Detecting CXX compile features 2020-05-29T11:57:48,926 -- Detecting CXX compile features - done 2020-05-29T11:57:48,945 -- Configuring done 2020-05-29T11:57:48,970 -- Generating done 2020-05-29T11:57:48,995 -- Build files have been written to: /tmp/pip-wheel-1_kzanao/pystospa/_cmake_test_compile/build 2020-05-29T11:57:49,010 -- 2020-05-29T11:57:49,011 ------- 2020-05-29T11:57:49,012 ------------ 2020-05-29T11:57:49,012 ----------------- 2020-05-29T11:57:49,012 ---------------------- 2020-05-29T11:57:49,013 --------------------------- 2020-05-29T11:57:49,013 -------------------------------- 2020-05-29T11:57:49,014 -- Trying "Unix Makefiles" generator - success 2020-05-29T11:57:49,014 -------------------------------------------------------------------------------- 2020-05-29T11:57:49,051 Configuring Project 2020-05-29T11:57:49,052 Working directory: 2020-05-29T11:57:49,052 /tmp/pip-wheel-1_kzanao/pystospa/_skbuild/linux-armv7l-3.7/cmake-build 2020-05-29T11:57:49,053 Command: 2020-05-29T11:57:49,053 /tmp/pip-wheel-1_kzanao/pystospa/.eggs/cmake-3.17.2-py3.7-linux-armv7l.egg/cmake/data/bin/cmake /tmp/pip-wheel-1_kzanao/pystospa -G 'Unix Makefiles' -DCMAKE_INSTALL_PREFIX:PATH=/tmp/pip-wheel-1_kzanao/pystospa/_skbuild/linux-armv7l-3.7/cmake-install -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_VERSION_STRING:STRING=3.7.3 -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.7m -DPYTHON_LIBRARY:FILEPATH=/usr/lib/arm-linux-gnueabihf/libpython3.7m.so -DSKBUILD:BOOL=TRUE -DCMAKE_MODULE_PATH:PATH=/usr/local/lib/python3.7/dist-packages/skbuild/resources/cmake -DCMAKE_BUILD_TYPE:STRING=Release 2020-05-29T11:57:49,822 -- The CXX compiler identification is GNU 8.3.0 2020-05-29T11:57:49,875 -- Check for working CXX compiler: /usr/bin/c++ 2020-05-29T11:57:50,683 -- Check for working CXX compiler: /usr/bin/c++ - works 2020-05-29T11:57:50,695 -- Detecting CXX compiler ABI info 2020-05-29T11:57:51,461 -- Detecting CXX compiler ABI info - done 2020-05-29T11:57:51,559 -- Detecting CXX compile features 2020-05-29T11:57:51,564 -- Detecting CXX compile features - done 2020-05-29T11:57:51,595 -- Project version: 2.0.28 2020-05-29T11:57:51,596 -- CMAKE_BUILD_TYPE: Release 2020-05-29T11:57:51,597 -- CMAKE_CXX_FLAGS: -O3 -DNDEBUG 2020-05-29T11:57:51,675 -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) 2020-05-29T11:57:51,688 -- Found Sphinx: /usr/bin/sphinx-build 2020-05-29T11:57:51,903 -- Found PythonInterp: /usr/bin/python3 (found version "3.7.3") 2020-05-29T11:57:52,140 -- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.7m.so 2020-05-29T11:57:52,202 -- pybind11 v2.4.dev4 2020-05-29T11:57:52,244 -- Performing Test HAS_FLTO 2020-05-29T11:57:54,768 -- Performing Test HAS_FLTO - Success 2020-05-29T11:57:54,772 -- LTO enabled 2020-05-29T11:57:54,810 -- Configuring done 2020-05-29T11:57:55,204 -- Generating done 2020-05-29T11:57:55,270 CMake Warning: 2020-05-29T11:57:55,270 Manually-specified variables were not used by the project: 2020-05-29T11:57:55,271 SKBUILD 2020-05-29T11:57:55,280 -- Build files have been written to: /tmp/pip-wheel-1_kzanao/pystospa/_skbuild/linux-armv7l-3.7/cmake-build 2020-05-29T11:57:55,587 Scanning dependencies of target benchmark_diffusion 2020-05-29T11:57:55,634 [ 7%] Building CXX object benchmarks/CMakeFiles/benchmark_diffusion.dir/benchmark_diffusion.cpp.o 2020-05-29T11:58:01,025 In file included from /usr/include/c++/8/vector:69, 2020-05-29T11:58:01,026 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T11:58:01,027 from /usr/include/c++/8/random:49, 2020-05-29T11:58:01,027 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T11:58:01,028 from /tmp/pip-wheel-1_kzanao/pystospa/benchmarks/benchmark_diffusion.cpp:3: 2020-05-29T11:58:01,028 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const StoSpa2::Reaction&}; _Tp = StoSpa2::Reaction; _Alloc = std::allocator]’: 2020-05-29T11:58:01,029 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:58:01,030 vector<_Tp, _Alloc>:: 2020-05-29T11:58:01,030 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T11:58:01,263 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’: 2020-05-29T11:58:01,263 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:58:01,673 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {StoSpa2::Voxel}; _Tp = StoSpa2::Voxel; _Alloc = std::allocator]’: 2020-05-29T11:58:01,674 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:58:03,085 /usr/include/c++/8/bits/vector.tcc: In function ‘int main(int, char**)’: 2020-05-29T11:58:03,086 /usr/include/c++/8/bits/vector.tcc:343:2: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:58:03,086 _M_realloc_insert(begin() + __n, std::move(__v)); 2020-05-29T11:58:03,086 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:58:03,090 In file included from /usr/include/c++/8/vector:64, 2020-05-29T11:58:03,090 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T11:58:03,091 from /usr/include/c++/8/random:49, 2020-05-29T11:58:03,091 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T11:58:03,091 from /tmp/pip-wheel-1_kzanao/pystospa/benchmarks/benchmark_diffusion.cpp:3: 2020-05-29T11:58:03,091 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:58:03,092 _M_realloc_insert(end(), __x); 2020-05-29T11:58:03,092 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:58:03,095 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:58:03,095 _M_realloc_insert(end(), __x); 2020-05-29T11:58:03,096 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:58:03,105 In file included from /usr/include/c++/8/vector:69, 2020-05-29T11:58:03,106 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T11:58:03,106 from /usr/include/c++/8/random:49, 2020-05-29T11:58:03,107 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T11:58:03,108 from /tmp/pip-wheel-1_kzanao/pystospa/benchmarks/benchmark_diffusion.cpp:3: 2020-05-29T11:58:03,108 /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:58:03,109 _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2020-05-29T11:58:03,109 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:58:05,963 [ 14%] Linking CXX executable benchmark_diffusion 2020-05-29T11:58:06,447 [ 14%] Built target benchmark_diffusion 2020-05-29T11:58:06,514 Scanning dependencies of target benchmark_cme 2020-05-29T11:58:06,571 [ 21%] Building CXX object benchmarks/CMakeFiles/benchmark_cme.dir/benchmark_cme.cpp.o 2020-05-29T11:58:11,538 In file included from /usr/include/c++/8/vector:69, 2020-05-29T11:58:11,539 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T11:58:11,539 from /usr/include/c++/8/random:49, 2020-05-29T11:58:11,540 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T11:58:11,540 from /tmp/pip-wheel-1_kzanao/pystospa/benchmarks/benchmark_cme.cpp:3: 2020-05-29T11:58:11,541 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const StoSpa2::Reaction&}; _Tp = StoSpa2::Reaction; _Alloc = std::allocator]’: 2020-05-29T11:58:11,541 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:58:11,542 vector<_Tp, _Alloc>:: 2020-05-29T11:58:11,543 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T11:58:11,736 In file included from /usr/include/c++/8/vector:64, 2020-05-29T11:58:11,737 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T11:58:11,737 from /usr/include/c++/8/random:49, 2020-05-29T11:58:11,738 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T11:58:11,738 from /tmp/pip-wheel-1_kzanao/pystospa/benchmarks/benchmark_cme.cpp:3: 2020-05-29T11:58:11,739 /usr/include/c++/8/bits/stl_vector.h: In member function ‘void StoSpa2::Voxel::add_reaction(StoSpa2::Reaction)’: 2020-05-29T11:58:11,739 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:58:11,740 _M_realloc_insert(end(), __x); 2020-05-29T11:58:11,740 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:58:11,845 In file included from /usr/include/c++/8/vector:69, 2020-05-29T11:58:11,846 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T11:58:11,846 from /usr/include/c++/8/random:49, 2020-05-29T11:58:11,847 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T11:58:11,847 from /tmp/pip-wheel-1_kzanao/pystospa/benchmarks/benchmark_cme.cpp:3: 2020-05-29T11:58:11,848 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’: 2020-05-29T11:58:11,848 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:58:11,849 vector<_Tp, _Alloc>:: 2020-05-29T11:58:11,849 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T11:58:13,134 /usr/include/c++/8/bits/vector.tcc: In function ‘int main(int, char**)’: 2020-05-29T11:58:13,135 /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:58:13,135 _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2020-05-29T11:58:13,136 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:58:15,559 [ 28%] Linking CXX executable benchmark_cme 2020-05-29T11:58:16,023 [ 28%] Built target benchmark_cme 2020-05-29T11:58:16,082 Scanning dependencies of target benchmark_schnakenberg 2020-05-29T11:58:16,132 [ 35%] Building CXX object benchmarks/CMakeFiles/benchmark_schnakenberg.dir/benchmark_schnakenberg.cpp.o 2020-05-29T11:58:21,315 In file included from /usr/include/c++/8/vector:69, 2020-05-29T11:58:21,316 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T11:58:21,317 from /usr/include/c++/8/random:49, 2020-05-29T11:58:21,317 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T11:58:21,318 from /tmp/pip-wheel-1_kzanao/pystospa/benchmarks/benchmark_schnakenberg.cpp:3: 2020-05-29T11:58:21,319 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const StoSpa2::Reaction&}; _Tp = StoSpa2::Reaction; _Alloc = std::allocator]’: 2020-05-29T11:58:21,319 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:58:21,320 vector<_Tp, _Alloc>:: 2020-05-29T11:58:21,320 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T11:58:21,514 In file included from /usr/include/c++/8/vector:64, 2020-05-29T11:58:21,514 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T11:58:21,515 from /usr/include/c++/8/random:49, 2020-05-29T11:58:21,515 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T11:58:21,516 from /tmp/pip-wheel-1_kzanao/pystospa/benchmarks/benchmark_schnakenberg.cpp:3: 2020-05-29T11:58:21,516 /usr/include/c++/8/bits/stl_vector.h: In member function ‘void StoSpa2::Voxel::add_reaction(StoSpa2::Reaction)’: 2020-05-29T11:58:21,517 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:58:21,517 _M_realloc_insert(end(), __x); 2020-05-29T11:58:21,518 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:58:21,622 In file included from /usr/include/c++/8/vector:69, 2020-05-29T11:58:21,623 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T11:58:21,623 from /usr/include/c++/8/random:49, 2020-05-29T11:58:21,624 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T11:58:21,624 from /tmp/pip-wheel-1_kzanao/pystospa/benchmarks/benchmark_schnakenberg.cpp:3: 2020-05-29T11:58:21,625 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’: 2020-05-29T11:58:21,625 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:58:21,626 vector<_Tp, _Alloc>:: 2020-05-29T11:58:21,626 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T11:58:23,041 /usr/include/c++/8/bits/vector.tcc: In function ‘int main(int, char**)’: 2020-05-29T11:58:23,042 /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:58:23,043 _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2020-05-29T11:58:23,043 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:58:25,293 [ 42%] Linking CXX executable benchmark_schnakenberg 2020-05-29T11:58:25,773 [ 42%] Built target benchmark_schnakenberg 2020-05-29T11:58:25,883 Scanning dependencies of target unittests 2020-05-29T11:58:25,942 [ 50%] Building CXX object tests/CMakeFiles/unittests.dir/unittests.cpp.o 2020-05-29T11:59:23,451 In file included from /usr/include/c++/8/vector:69, 2020-05-29T11:59:23,451 from /tmp/pip-wheel-1_kzanao/pystospa/tests/catch.hpp:543, 2020-05-29T11:59:23,452 from /tmp/pip-wheel-1_kzanao/pystospa/tests/unittests.cpp:4: 2020-05-29T11:59:23,453 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator]’: 2020-05-29T11:59:23,453 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:59:23,453 vector<_Tp, _Alloc>:: 2020-05-29T11:59:23,454 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T11:59:23,590 In file included from /usr/include/c++/8/vector:64, 2020-05-29T11:59:23,591 from /tmp/pip-wheel-1_kzanao/pystospa/tests/catch.hpp:543, 2020-05-29T11:59:23,592 from /tmp/pip-wheel-1_kzanao/pystospa/tests/unittests.cpp:4: 2020-05-29T11:59:23,592 /usr/include/c++/8/bits/stl_vector.h: In member function ‘virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)’: 2020-05-29T11:59:23,593 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:59:23,593 _M_realloc_insert(end(), __x); 2020-05-29T11:59:23,594 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:59:26,289 In file included from /usr/include/c++/8/vector:69, 2020-05-29T11:59:26,289 from /tmp/pip-wheel-1_kzanao/pystospa/tests/catch.hpp:543, 2020-05-29T11:59:26,290 from /tmp/pip-wheel-1_kzanao/pystospa/tests/unittests.cpp:4: 2020-05-29T11:59:26,290 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const StoSpa2::Reaction&}; _Tp = StoSpa2::Reaction; _Alloc = std::allocator]’: 2020-05-29T11:59:26,290 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:59:26,291 vector<_Tp, _Alloc>:: 2020-05-29T11:59:26,291 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T11:59:26,444 In file included from /usr/include/c++/8/vector:64, 2020-05-29T11:59:26,445 from /tmp/pip-wheel-1_kzanao/pystospa/tests/catch.hpp:543, 2020-05-29T11:59:26,445 from /tmp/pip-wheel-1_kzanao/pystospa/tests/unittests.cpp:4: 2020-05-29T11:59:26,445 /usr/include/c++/8/bits/stl_vector.h: In member function ‘void StoSpa2::Voxel::add_reaction(StoSpa2::Reaction)’: 2020-05-29T11:59:26,446 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:59:26,446 _M_realloc_insert(end(), __x); 2020-05-29T11:59:26,446 ^~~~~~~~~~~~~~~~~ 2020-05-29T11:59:26,529 In file included from /usr/include/c++/8/vector:69, 2020-05-29T11:59:26,530 from /tmp/pip-wheel-1_kzanao/pystospa/tests/catch.hpp:543, 2020-05-29T11:59:26,530 from /tmp/pip-wheel-1_kzanao/pystospa/tests/unittests.cpp:4: 2020-05-29T11:59:26,530 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’: 2020-05-29T11:59:26,531 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T11:59:26,531 vector<_Tp, _Alloc>:: 2020-05-29T11:59:26,531 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T11:59:52,688 /usr/include/c++/8/bits/vector.tcc: In member function ‘void StoSpa2::Simulator::initialise_next_reaction_times()’: 2020-05-29T11:59:52,690 /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T11:59:52,690 _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2020-05-29T11:59:52,691 ^~~~~~~~~~~~~~~~~ 2020-05-29T12:00:06,136 [ 57%] Linking CXX executable unittests 2020-05-29T12:00:07,132 [ 57%] Built target unittests 2020-05-29T12:00:07,503 Scanning dependencies of target pystospa 2020-05-29T12:00:07,555 [ 64%] Building CXX object pystospa/CMakeFiles/pystospa.dir/src/pystospa.cpp.o 2020-05-29T12:00:32,321 [ 71%] Linking CXX shared module pystospa.cpython-37m-arm-linux-gnueabihf.so 2020-05-29T12:00:58,329 [ 71%] Built target pystospa 2020-05-29T12:00:58,398 Scanning dependencies of target cme_example 2020-05-29T12:00:58,453 [ 78%] Building CXX object examples/CMakeFiles/cme_example.dir/cme_example.cpp.o 2020-05-29T12:01:03,669 In file included from /usr/include/c++/8/vector:69, 2020-05-29T12:01:03,669 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T12:01:03,670 from /usr/include/c++/8/random:49, 2020-05-29T12:01:03,670 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T12:01:03,670 from /tmp/pip-wheel-1_kzanao/pystospa/examples/cme_example.cpp:2: 2020-05-29T12:01:03,671 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const StoSpa2::Reaction&}; _Tp = StoSpa2::Reaction; _Alloc = std::allocator]’: 2020-05-29T12:01:03,671 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T12:01:03,671 vector<_Tp, _Alloc>:: 2020-05-29T12:01:03,672 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T12:01:03,868 In file included from /usr/include/c++/8/vector:64, 2020-05-29T12:01:03,869 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T12:01:03,869 from /usr/include/c++/8/random:49, 2020-05-29T12:01:03,870 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T12:01:03,870 from /tmp/pip-wheel-1_kzanao/pystospa/examples/cme_example.cpp:2: 2020-05-29T12:01:03,870 /usr/include/c++/8/bits/stl_vector.h: In member function ‘void StoSpa2::Voxel::add_reaction(StoSpa2::Reaction)’: 2020-05-29T12:01:03,871 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T12:01:03,871 _M_realloc_insert(end(), __x); 2020-05-29T12:01:03,871 ^~~~~~~~~~~~~~~~~ 2020-05-29T12:01:03,980 In file included from /usr/include/c++/8/vector:69, 2020-05-29T12:01:03,980 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T12:01:03,981 from /usr/include/c++/8/random:49, 2020-05-29T12:01:03,981 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T12:01:03,981 from /tmp/pip-wheel-1_kzanao/pystospa/examples/cme_example.cpp:2: 2020-05-29T12:01:03,982 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’: 2020-05-29T12:01:03,982 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T12:01:03,982 vector<_Tp, _Alloc>:: 2020-05-29T12:01:03,983 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T12:01:04,366 /usr/include/c++/8/bits/vector.tcc: In constructor ‘StoSpa2::Simulator::Simulator(std::vector)’: 2020-05-29T12:01:04,366 /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T12:01:04,367 _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2020-05-29T12:01:04,367 ^~~~~~~~~~~~~~~~~ 2020-05-29T12:01:06,011 [ 85%] Linking CXX executable cme_example 2020-05-29T12:01:06,512 [ 85%] Built target cme_example 2020-05-29T12:01:06,575 Scanning dependencies of target rdme_example 2020-05-29T12:01:06,625 [ 92%] Building CXX object examples/CMakeFiles/rdme_example.dir/rdme_example.cpp.o 2020-05-29T12:01:11,602 In file included from /usr/include/c++/8/vector:69, 2020-05-29T12:01:11,602 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T12:01:11,603 from /usr/include/c++/8/random:49, 2020-05-29T12:01:11,603 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T12:01:11,603 from /tmp/pip-wheel-1_kzanao/pystospa/examples/rdme_example.cpp:2: 2020-05-29T12:01:11,604 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const StoSpa2::Reaction&}; _Tp = StoSpa2::Reaction; _Alloc = std::allocator]’: 2020-05-29T12:01:11,604 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T12:01:11,604 vector<_Tp, _Alloc>:: 2020-05-29T12:01:11,605 ^~~~~~~~~~~~~~~~~~~ 2020-05-29T12:01:11,840 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double&}; _Tp = double; _Alloc = std::allocator]’: 2020-05-29T12:01:11,841 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T12:01:12,172 /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {StoSpa2::Voxel}; _Tp = StoSpa2::Voxel; _Alloc = std::allocator]’: 2020-05-29T12:01:12,173 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T12:01:12,173 /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector::iterator’ {aka ‘__gnu_cxx::__normal_iterator >’} changed in GCC 7.1 2020-05-29T12:01:12,545 /usr/include/c++/8/bits/vector.tcc: In constructor ‘StoSpa2::Simulator::Simulator(std::vector)’: 2020-05-29T12:01:12,546 /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T12:01:12,546 _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2020-05-29T12:01:12,546 ^~~~~~~~~~~~~~~~~ 2020-05-29T12:01:14,136 /usr/include/c++/8/bits/vector.tcc: In function ‘int main()’: 2020-05-29T12:01:14,136 /usr/include/c++/8/bits/vector.tcc:343:2: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T12:01:14,137 _M_realloc_insert(begin() + __n, std::move(__v)); 2020-05-29T12:01:14,137 ^~~~~~~~~~~~~~~~~ 2020-05-29T12:01:14,141 In file included from /usr/include/c++/8/vector:64, 2020-05-29T12:01:14,141 from /usr/include/c++/8/bits/random.h:34, 2020-05-29T12:01:14,142 from /usr/include/c++/8/random:49, 2020-05-29T12:01:14,143 from /tmp/pip-wheel-1_kzanao/pystospa/src/simulator.hpp:10, 2020-05-29T12:01:14,143 from /tmp/pip-wheel-1_kzanao/pystospa/examples/rdme_example.cpp:2: 2020-05-29T12:01:14,144 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T12:01:14,144 _M_realloc_insert(end(), __x); 2020-05-29T12:01:14,145 ^~~~~~~~~~~~~~~~~ 2020-05-29T12:01:14,145 /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2020-05-29T12:01:14,146 _M_realloc_insert(end(), __x); 2020-05-29T12:01:14,146 ^~~~~~~~~~~~~~~~~ 2020-05-29T12:01:15,704 [100%] Linking CXX executable rdme_example 2020-05-29T12:01:16,192 [100%] Built target rdme_example 2020-05-29T12:01:16,268 Install the project... 2020-05-29T12:01:16,289 -- Install configuration: "Release" 2020-05-29T12:01:16,304 -- Installing: /tmp/pip-wheel-1_kzanao/pystospa/_skbuild/linux-armv7l-3.7/cmake-install/pystospa/pystospa.cpython-37m-arm-linux-gnueabihf.so 2020-05-29T12:01:16,331 -- Installing: /tmp/pip-wheel-1_kzanao/pystospa/_skbuild/linux-armv7l-3.7/cmake-install/pystospa/__init__.py 2020-05-29T12:01:16,358 package init file 'pystospa/__init__.py' not found (or not a regular file) 2020-05-29T12:01:16,513 running bdist_wheel 2020-05-29T12:01:16,515 running build 2020-05-29T12:01:16,516 running build_py 2020-05-29T12:01:16,519 creating _skbuild/linux-armv7l-3.7/setuptools/lib 2020-05-29T12:01:16,520 creating _skbuild/linux-armv7l-3.7/setuptools/lib/pystospa 2020-05-29T12:01:16,523 copying _skbuild/linux-armv7l-3.7/cmake-install/pystospa/__init__.py -> _skbuild/linux-armv7l-3.7/setuptools/lib/pystospa 2020-05-29T12:01:16,529 copying _skbuild/linux-armv7l-3.7/cmake-install/pystospa/pystospa.cpython-37m-arm-linux-gnueabihf.so -> _skbuild/linux-armv7l-3.7/setuptools/lib/pystospa 2020-05-29T12:01:16,552 copied 1 files 2020-05-29T12:01:16,553 running build_ext 2020-05-29T12:01:16,556 installing to _skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l/wheel 2020-05-29T12:01:16,557 running install 2020-05-29T12:01:16,560 running install_lib 2020-05-29T12:01:16,564 creating _skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l 2020-05-29T12:01:16,565 creating _skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l/wheel 2020-05-29T12:01:16,570 creating _skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l/wheel/pystospa 2020-05-29T12:01:16,572 copying _skbuild/linux-armv7l-3.7/setuptools/lib/pystospa/__init__.py -> _skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l/wheel/pystospa 2020-05-29T12:01:16,576 copying _skbuild/linux-armv7l-3.7/setuptools/lib/pystospa/pystospa.cpython-37m-arm-linux-gnueabihf.so -> _skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l/wheel/pystospa 2020-05-29T12:01:16,596 copied 2 files 2020-05-29T12:01:16,596 running install_egg_info 2020-05-29T12:01:16,606 running egg_info 2020-05-29T12:01:16,607 creating pystospa.egg-info 2020-05-29T12:01:16,609 writing pystospa.egg-info/PKG-INFO 2020-05-29T12:01:16,615 writing dependency_links to pystospa.egg-info/dependency_links.txt 2020-05-29T12:01:16,620 writing top-level names to pystospa.egg-info/top_level.txt 2020-05-29T12:01:16,624 writing manifest file 'pystospa.egg-info/SOURCES.txt' 2020-05-29T12:01:16,631 reading manifest file 'pystospa.egg-info/SOURCES.txt' 2020-05-29T12:01:16,639 writing manifest file 'pystospa.egg-info/SOURCES.txt' 2020-05-29T12:01:16,642 Copying pystospa.egg-info to _skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l/wheel/pystospa-2.0.28-py3.7.egg-info 2020-05-29T12:01:16,667 running install_scripts 2020-05-29T12:01:16,668 copied 0 files 2020-05-29T12:01:16,707 adding license file "LICENCE" (matched pattern "LICEN[CS]E*") 2020-05-29T12:01:16,723 creating _skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l/wheel/pystospa-2.0.28.dist-info/WHEEL 2020-05-29T12:01:16,730 creating '/tmp/pip-wheel-dthh0x8z/pystospa-2.0.28-cp37-cp37m-linux_armv7l.whl' and adding '_skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l/wheel' to it 2020-05-29T12:01:16,736 adding 'pystospa/__init__.py' 2020-05-29T12:01:16,804 adding 'pystospa/pystospa.cpython-37m-arm-linux-gnueabihf.so' 2020-05-29T12:01:16,818 adding 'pystospa-2.0.28.dist-info/LICENCE' 2020-05-29T12:01:16,820 adding 'pystospa-2.0.28.dist-info/METADATA' 2020-05-29T12:01:16,823 adding 'pystospa-2.0.28.dist-info/WHEEL' 2020-05-29T12:01:16,825 adding 'pystospa-2.0.28.dist-info/top_level.txt' 2020-05-29T12:01:16,826 adding 'pystospa-2.0.28.dist-info/RECORD' 2020-05-29T12:01:16,835 removing _skbuild/linux-armv7l-3.7/setuptools/bdist.linux-armv7l/wheel 2020-05-29T12:01:17,022 Building wheel for pystospa (setup.py): finished with status 'done' 2020-05-29T12:01:17,029 Created wheel for pystospa: filename=pystospa-2.0.28-cp37-cp37m-linux_armv7l.whl size=83609 sha256=d44e284b3180f90e0eacc69a260c8c2dec6fbc4411e558662731851b3022bf27 2020-05-29T12:01:17,029 Stored in directory: /tmp/pip-ephem-wheel-cache-311q5dxn/wheels/83/4b/84/b4ec04bc273896b5f4a56e570b0c38a9fe1d4208204110ac35 2020-05-29T12:01:17,033 Successfully built pystospa 2020-05-29T12:01:17,054 Removed build tracker: '/tmp/pip-req-tracker-1yrgcz7g'