2020-10-06T22:42:17,721 Created temporary directory: /tmp/pip-ephem-wheel-cache-7d6n5rzz
2020-10-06T22:42:17,723 Created temporary directory: /tmp/pip-req-tracker-cg_yaiop
2020-10-06T22:42:17,724 Initialized build tracking at /tmp/pip-req-tracker-cg_yaiop
2020-10-06T22:42:17,724 Created build tracker: /tmp/pip-req-tracker-cg_yaiop
2020-10-06T22:42:17,724 Entered build tracker: /tmp/pip-req-tracker-cg_yaiop
2020-10-06T22:42:17,725 Created temporary directory: /tmp/pip-wheel-767zq821
2020-10-06T22:42:17,733 1 location(s) to search for versions of shmlast:
2020-10-06T22:42:17,733 * https://pypi.org/simple/shmlast/
2020-10-06T22:42:17,733 Fetching project page and analyzing links: https://pypi.org/simple/shmlast/
2020-10-06T22:42:17,734 Getting page https://pypi.org/simple/shmlast/
2020-10-06T22:42:17,735 Found index url https://pypi.org/simple
2020-10-06T22:42:17,945   Found link https://files.pythonhosted.org/packages/64/be/9023dbf127dc7840c5309c3f0884893f8ab23843edfd4bd2e8fd9479234b/shmlast-1.0.tar.gz#sha256=cc83c38ac5274019b1ce00e41129861799fe9dd11f2fae18d340bc766879b338 (from https://pypi.org/simple/shmlast/), version: 1.0
2020-10-06T22:42:17,945   Found link https://files.pythonhosted.org/packages/b2/01/21752968b42feefc6f8dedc1ce4874073b9bd9df813c74d14acccd4994c0/shmlast-1.0.1.tar.gz#sha256=825ecf92b49929f2a20abf1d2a756fa3eb419128ba91d3bbfe05763066e3dd73 (from https://pypi.org/simple/shmlast/), version: 1.0.1
2020-10-06T22:42:17,945   Found link https://files.pythonhosted.org/packages/1a/46/4e5bfe574fdbf2dd7a0cbb47693d5877c07e87dbcdac8f8724030e2f2e48/shmlast-1.0.2.tar.gz#sha256=0670f449f4df648e827a75ddcbf9c88f49383fff592f12c9f82b666127062305 (from https://pypi.org/simple/shmlast/), version: 1.0.2
2020-10-06T22:42:17,946   Found link https://files.pythonhosted.org/packages/a8/3b/f9f396efddfa567421e620a0ee1664684e7f96931b98affe74a323e40f17/shmlast-1.0.3.tar.gz#sha256=9e418f49cff36c4b490e55f03331ef8021086e7f1145e4b4fc4875a37205eb4c (from https://pypi.org/simple/shmlast/), version: 1.0.3
2020-10-06T22:42:17,946   Found link https://files.pythonhosted.org/packages/e3/70/bbf6439fdbfe0772d3cc29ff8f7d9fbc73786c0fb3a5b2f672cdde2e6f79/shmlast-1.1.tar.gz#sha256=89282f633f601fbef1453271491e27b7064ba679497c2980c4d6373edcd3999b (from https://pypi.org/simple/shmlast/), version: 1.1
2020-10-06T22:42:17,946   Found link https://files.pythonhosted.org/packages/e2/de/28d5bdfaf7748f859f392587bc5a8c7518c3fdfe3ea6df2c9ea8b0d3659c/shmlast-1.2.tar.gz#sha256=3f2a198ca380945d8b31d9189811e94e886a0a350056b07390a61faec1f275f8 (from https://pypi.org/simple/shmlast/), version: 1.2
2020-10-06T22:42:17,947   Found link https://files.pythonhosted.org/packages/12/43/9a80e49b753ae8663ec4d5293cc19cfa450d4e95087f7076f18467856b83/shmlast-1.2.1.tar.gz#sha256=b080d85b36a0ae4e97f9b78df5aba004ae25a47d2690981f295573174ac44a45 (from https://pypi.org/simple/shmlast/), version: 1.2.1
2020-10-06T22:42:17,947   Found link https://files.pythonhosted.org/packages/d0/31/ddc978ad6983090a689cb4cd6d873b0c8b14f5e36341ef55d0d32299ccc1/shmlast-1.6.tar.gz#sha256=a0702305e702cb4a2ceb27204fc732c0ade19f8b3559a2efab38269667cb9137 (from https://pypi.org/simple/shmlast/), version: 1.6
2020-10-06T22:42:17,953 Given no hashes to check 1 links for project 'shmlast': discarding no candidates
2020-10-06T22:42:17,954 Using version 1.6 (newest of versions: 1.6)
2020-10-06T22:42:17,958 Collecting shmlast==1.6
2020-10-06T22:42:17,960   Created temporary directory: /tmp/pip-unpack-z80ativ5
2020-10-06T22:42:18,044   Downloading shmlast-1.6.tar.gz (5.2 MB)
2020-10-06T22:42:19,362   Added shmlast==1.6 from https://files.pythonhosted.org/packages/d0/31/ddc978ad6983090a689cb4cd6d873b0c8b14f5e36341ef55d0d32299ccc1/shmlast-1.6.tar.gz#sha256=a0702305e702cb4a2ceb27204fc732c0ade19f8b3559a2efab38269667cb9137 to build tracker '/tmp/pip-req-tracker-cg_yaiop'
2020-10-06T22:42:19,364     Running setup.py (path:/tmp/pip-wheel-767zq821/shmlast/setup.py) egg_info for package shmlast
2020-10-06T22:42:19,364     Created temporary directory: /tmp/pip-pip-egg-info-05tm4v00
2020-10-06T22:42:19,365     Running command python setup.py egg_info
2020-10-06T22:42:20,323     running egg_info
2020-10-06T22:42:20,325     creating /tmp/pip-pip-egg-info-05tm4v00/shmlast.egg-info
2020-10-06T22:42:20,326     writing /tmp/pip-pip-egg-info-05tm4v00/shmlast.egg-info/PKG-INFO
2020-10-06T22:42:20,329     writing dependency_links to /tmp/pip-pip-egg-info-05tm4v00/shmlast.egg-info/dependency_links.txt
2020-10-06T22:42:20,331     writing requirements to /tmp/pip-pip-egg-info-05tm4v00/shmlast.egg-info/requires.txt
2020-10-06T22:42:20,332     writing top-level names to /tmp/pip-pip-egg-info-05tm4v00/shmlast.egg-info/top_level.txt
2020-10-06T22:42:20,334     writing manifest file '/tmp/pip-pip-egg-info-05tm4v00/shmlast.egg-info/SOURCES.txt'
2020-10-06T22:42:20,472     reading manifest file '/tmp/pip-pip-egg-info-05tm4v00/shmlast.egg-info/SOURCES.txt'
2020-10-06T22:42:20,473     reading manifest template 'MANIFEST.in'
2020-10-06T22:42:20,488     warning: no files found matching '*.faa' under directory 'shmlast/tests/data'
2020-10-06T22:42:20,498     writing manifest file '/tmp/pip-pip-egg-info-05tm4v00/shmlast.egg-info/SOURCES.txt'
2020-10-06T22:42:20,565   Source in /tmp/pip-wheel-767zq821/shmlast has version 1.6, which satisfies requirement shmlast==1.6 from https://files.pythonhosted.org/packages/d0/31/ddc978ad6983090a689cb4cd6d873b0c8b14f5e36341ef55d0d32299ccc1/shmlast-1.6.tar.gz#sha256=a0702305e702cb4a2ceb27204fc732c0ade19f8b3559a2efab38269667cb9137
2020-10-06T22:42:20,566   Removed shmlast==1.6 from https://files.pythonhosted.org/packages/d0/31/ddc978ad6983090a689cb4cd6d873b0c8b14f5e36341ef55d0d32299ccc1/shmlast-1.6.tar.gz#sha256=a0702305e702cb4a2ceb27204fc732c0ade19f8b3559a2efab38269667cb9137 from build tracker '/tmp/pip-req-tracker-cg_yaiop'
2020-10-06T22:42:20,569 Building wheels for collected packages: shmlast
2020-10-06T22:42:20,573   Created temporary directory: /tmp/pip-wheel-y_bmfx9y
2020-10-06T22:42:20,574   Building wheel for shmlast (setup.py): started
2020-10-06T22:42:20,574   Destination directory: /tmp/pip-wheel-y_bmfx9y
2020-10-06T22:42:20,574   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-767zq821/shmlast/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-767zq821/shmlast/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-y_bmfx9y
2020-10-06T22:42:21,561   running bdist_wheel
2020-10-06T22:42:21,568   running build
2020-10-06T22:42:21,568   running build_py
2020-10-06T22:42:21,697   creating build
2020-10-06T22:42:21,698   creating build/lib
2020-10-06T22:42:21,699   creating build/lib/shmlast
2020-10-06T22:42:21,700   copying shmlast/app.py -> build/lib/shmlast
2020-10-06T22:42:21,702   copying shmlast/profile.py -> build/lib/shmlast
2020-10-06T22:42:21,705   copying shmlast/__init__.py -> build/lib/shmlast
2020-10-06T22:42:21,707   copying shmlast/translate.py -> build/lib/shmlast
2020-10-06T22:42:21,709   copying shmlast/hits.py -> build/lib/shmlast
2020-10-06T22:42:21,711   copying shmlast/crbl.py -> build/lib/shmlast
2020-10-06T22:42:21,714   copying shmlast/last.py -> build/lib/shmlast
2020-10-06T22:42:21,716   copying shmlast/util.py -> build/lib/shmlast
2020-10-06T22:42:21,719   creating build/lib/shmlast/tests
2020-10-06T22:42:21,720   copying shmlast/tests/__init__.py -> build/lib/shmlast/tests
2020-10-06T22:42:21,723   copying shmlast/tests/test_script.py -> build/lib/shmlast/tests
2020-10-06T22:42:21,725   copying shmlast/tests/test_last.py -> build/lib/shmlast/tests
2020-10-06T22:42:21,728   copying shmlast/tests/utils.py -> build/lib/shmlast/tests
2020-10-06T22:42:21,730   copying shmlast/tests/test_besthits.py -> build/lib/shmlast/tests
2020-10-06T22:42:21,732   running egg_info
2020-10-06T22:42:21,750   writing shmlast.egg-info/PKG-INFO
2020-10-06T22:42:21,753   writing dependency_links to shmlast.egg-info/dependency_links.txt
2020-10-06T22:42:21,755   writing requirements to shmlast.egg-info/requires.txt
2020-10-06T22:42:21,756   writing top-level names to shmlast.egg-info/top_level.txt
2020-10-06T22:42:21,762   reading manifest file 'shmlast.egg-info/SOURCES.txt'
2020-10-06T22:42:21,764   reading manifest template 'MANIFEST.in'
2020-10-06T22:42:21,780   warning: no files found matching '*.faa' under directory 'shmlast/tests/data'
2020-10-06T22:42:21,794   writing manifest file 'shmlast.egg-info/SOURCES.txt'
2020-10-06T22:42:21,799   copying shmlast/VERSION -> build/lib/shmlast
2020-10-06T22:42:21,802   creating build/lib/shmlast/tests/data
2020-10-06T22:42:21,803   copying shmlast/tests/data/besthits.expected.csv -> build/lib/shmlast/tests/data
2020-10-06T22:42:21,806   copying shmlast/tests/data/db.maf.csv -> build/lib/shmlast/tests/data
2020-10-06T22:42:21,809   copying shmlast/tests/data/odb_subset.fa -> build/lib/shmlast/tests/data
2020-10-06T22:42:21,811   copying shmlast/tests/data/pep.fa -> build/lib/shmlast/tests/data
2020-10-06T22:42:21,815   copying shmlast/tests/data/pom.50.fa -> build/lib/shmlast/tests/data
2020-10-06T22:42:21,819   copying shmlast/tests/data/pom.single.fa -> build/lib/shmlast/tests/data
2020-10-06T22:42:21,821   copying shmlast/tests/data/query.maf.csv -> build/lib/shmlast/tests/data
2020-10-06T22:42:21,823   copying shmlast/tests/data/reciprocals.expected.csv -> build/lib/shmlast/tests/data
2020-10-06T22:42:21,825   copying shmlast/tests/data/sacPom.cdna.fa -> build/lib/shmlast/tests/data
2020-10-06T22:42:22,291   copying shmlast/tests/data/sacPom.pep.fa -> build/lib/shmlast/tests/data
2020-10-06T22:42:22,346   copying shmlast/tests/data/test-protein.fa -> build/lib/shmlast/tests/data
2020-10-06T22:42:22,349   copying shmlast/tests/data/test-transcript.fa -> build/lib/shmlast/tests/data
2020-10-06T22:42:22,353   running build_scripts
2020-10-06T22:42:22,354   creating build/scripts-3.7
2020-10-06T22:42:22,356   copying and adjusting bin/shmlast -> build/scripts-3.7
2020-10-06T22:42:22,358   changing mode of build/scripts-3.7/shmlast from 644 to 755
2020-10-06T22:42:22,363   installing to build/bdist.linux-armv7l/wheel
2020-10-06T22:42:22,363   running install
2020-10-06T22:42:22,365   running install_lib
2020-10-06T22:42:22,370   creating build/bdist.linux-armv7l
2020-10-06T22:42:22,371   creating build/bdist.linux-armv7l/wheel
2020-10-06T22:42:22,373   creating build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,375   copying build/lib/shmlast/app.py -> build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,377   copying build/lib/shmlast/profile.py -> build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,380   copying build/lib/shmlast/__init__.py -> build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,382   copying build/lib/shmlast/translate.py -> build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,384   copying build/lib/shmlast/hits.py -> build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,387   copying build/lib/shmlast/crbl.py -> build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,389   copying build/lib/shmlast/last.py -> build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,392   creating build/bdist.linux-armv7l/wheel/shmlast/tests
2020-10-06T22:42:22,394   creating build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,396   copying build/lib/shmlast/tests/data/sacPom.pep.fa -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,466   copying build/lib/shmlast/tests/data/test-transcript.fa -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,469   copying build/lib/shmlast/tests/data/besthits.expected.csv -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,471   copying build/lib/shmlast/tests/data/pom.50.fa -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,475   copying build/lib/shmlast/tests/data/odb_subset.fa -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,478   copying build/lib/shmlast/tests/data/pom.single.fa -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,481   copying build/lib/shmlast/tests/data/query.maf.csv -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,484   copying build/lib/shmlast/tests/data/pep.fa -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,489   copying build/lib/shmlast/tests/data/reciprocals.expected.csv -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,492   copying build/lib/shmlast/tests/data/test-protein.fa -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,495   copying build/lib/shmlast/tests/data/db.maf.csv -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,498   copying build/lib/shmlast/tests/data/sacPom.cdna.fa -> build/bdist.linux-armv7l/wheel/shmlast/tests/data
2020-10-06T22:42:22,711   copying build/lib/shmlast/tests/__init__.py -> build/bdist.linux-armv7l/wheel/shmlast/tests
2020-10-06T22:42:22,713   copying build/lib/shmlast/tests/test_script.py -> build/bdist.linux-armv7l/wheel/shmlast/tests
2020-10-06T22:42:22,715   copying build/lib/shmlast/tests/test_last.py -> build/bdist.linux-armv7l/wheel/shmlast/tests
2020-10-06T22:42:22,718   copying build/lib/shmlast/tests/utils.py -> build/bdist.linux-armv7l/wheel/shmlast/tests
2020-10-06T22:42:22,720   copying build/lib/shmlast/tests/test_besthits.py -> build/bdist.linux-armv7l/wheel/shmlast/tests
2020-10-06T22:42:22,722   copying build/lib/shmlast/util.py -> build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,725   copying build/lib/shmlast/VERSION -> build/bdist.linux-armv7l/wheel/shmlast
2020-10-06T22:42:22,727   running install_egg_info
2020-10-06T22:42:22,734   Copying shmlast.egg-info to build/bdist.linux-armv7l/wheel/shmlast-1.6-py3.7.egg-info
2020-10-06T22:42:22,749   running install_scripts
2020-10-06T22:42:22,805   creating build/bdist.linux-armv7l/wheel/shmlast-1.6.data
2020-10-06T22:42:22,805   creating build/bdist.linux-armv7l/wheel/shmlast-1.6.data/scripts
2020-10-06T22:42:22,807   copying build/scripts-3.7/shmlast -> build/bdist.linux-armv7l/wheel/shmlast-1.6.data/scripts
2020-10-06T22:42:22,809   changing mode of build/bdist.linux-armv7l/wheel/shmlast-1.6.data/scripts/shmlast to 755
2020-10-06T22:42:22,837   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2020-10-06T22:42:22,843   creating build/bdist.linux-armv7l/wheel/shmlast-1.6.dist-info/WHEEL
2020-10-06T22:42:22,846   creating '/tmp/pip-wheel-y_bmfx9y/shmlast-1.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2020-10-06T22:42:22,849   adding 'shmlast/VERSION'
2020-10-06T22:42:22,851   adding 'shmlast/__init__.py'
2020-10-06T22:42:22,854   adding 'shmlast/app.py'
2020-10-06T22:42:22,856   adding 'shmlast/crbl.py'
2020-10-06T22:42:22,859   adding 'shmlast/hits.py'
2020-10-06T22:42:22,861   adding 'shmlast/last.py'
2020-10-06T22:42:22,864   adding 'shmlast/profile.py'
2020-10-06T22:42:22,867   adding 'shmlast/translate.py'
2020-10-06T22:42:22,869   adding 'shmlast/util.py'
2020-10-06T22:42:22,871   adding 'shmlast/tests/__init__.py'
2020-10-06T22:42:22,873   adding 'shmlast/tests/test_besthits.py'
2020-10-06T22:42:22,875   adding 'shmlast/tests/test_last.py'
2020-10-06T22:42:22,876   adding 'shmlast/tests/test_script.py'
2020-10-06T22:42:22,878   adding 'shmlast/tests/utils.py'
2020-10-06T22:42:22,881   adding 'shmlast/tests/data/besthits.expected.csv'
2020-10-06T22:42:22,883   adding 'shmlast/tests/data/db.maf.csv'
2020-10-06T22:42:22,884   adding 'shmlast/tests/data/odb_subset.fa'
2020-10-06T22:42:22,893   adding 'shmlast/tests/data/pep.fa'
2020-10-06T22:42:22,939   adding 'shmlast/tests/data/pom.50.fa'
2020-10-06T22:42:22,942   adding 'shmlast/tests/data/pom.single.fa'
2020-10-06T22:42:22,944   adding 'shmlast/tests/data/query.maf.csv'
2020-10-06T22:42:22,946   adding 'shmlast/tests/data/reciprocals.expected.csv'
2020-10-06T22:42:28,818   adding 'shmlast/tests/data/sacPom.cdna.fa'
2020-10-06T22:42:29,316   adding 'shmlast/tests/data/sacPom.pep.fa'
2020-10-06T22:42:29,335   adding 'shmlast/tests/data/test-protein.fa'
2020-10-06T22:42:29,338   adding 'shmlast/tests/data/test-transcript.fa'
2020-10-06T22:42:29,341   adding 'shmlast-1.6.data/scripts/shmlast'
2020-10-06T22:42:29,344   adding 'shmlast-1.6.dist-info/LICENSE'
2020-10-06T22:42:29,346   adding 'shmlast-1.6.dist-info/METADATA'
2020-10-06T22:42:29,347   adding 'shmlast-1.6.dist-info/WHEEL'
2020-10-06T22:42:29,348   adding 'shmlast-1.6.dist-info/top_level.txt'
2020-10-06T22:42:29,350   adding 'shmlast-1.6.dist-info/RECORD'
2020-10-06T22:42:29,430   removing build/bdist.linux-armv7l/wheel
2020-10-06T22:42:29,518   Building wheel for shmlast (setup.py): finished with status 'done'
2020-10-06T22:42:29,584   Created wheel for shmlast: filename=shmlast-1.6-py3-none-any.whl size=5302655 sha256=afc2fdf409c9233faae88f2c155d2c75b5fad91dafdf28ba965d4805d2cfb249
2020-10-06T22:42:29,584   Stored in directory: /tmp/pip-ephem-wheel-cache-7d6n5rzz/wheels/de/8e/6e/d48921de306962c2cee21f810ed618c90d372cd5e909794eb1
2020-10-06T22:42:29,587 Successfully built shmlast
2020-10-06T22:42:29,823 Removed build tracker: '/tmp/pip-req-tracker-cg_yaiop'