2021-02-11T00:03:39,314 Created temporary directory: /tmp/pip-ephem-wheel-cache-y4sd57hi
2021-02-11T00:03:39,317 Created temporary directory: /tmp/pip-req-tracker-81ki9027
2021-02-11T00:03:39,317 Initialized build tracking at /tmp/pip-req-tracker-81ki9027
2021-02-11T00:03:39,317 Created build tracker: /tmp/pip-req-tracker-81ki9027
2021-02-11T00:03:39,317 Entered build tracker: /tmp/pip-req-tracker-81ki9027
2021-02-11T00:03:39,318 Created temporary directory: /tmp/pip-wheel-rwjd5ks2
2021-02-11T00:03:39,353 1 location(s) to search for versions of strainge:
2021-02-11T00:03:39,353 * https://pypi.org/simple/strainge/
2021-02-11T00:03:39,353 Fetching project page and analyzing links: https://pypi.org/simple/strainge/
2021-02-11T00:03:39,353 Getting page https://pypi.org/simple/strainge/
2021-02-11T00:03:39,355 Found index url https://pypi.org/simple
2021-02-11T00:03:39,463   Skipping link: none of the wheel's tags match: cp37-cp37m-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/44/00/68ba680fb9b00ca50440716ab5258dfe2eb6a4e6553721950ee74972f46d/strainge-1.0-cp37-cp37m-macosx_10_9_x86_64.whl#sha256=a1df9bed16d630d1f0e146a0d48c39207b16a0e90580eb610225e8ef0e7003be (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,464   Skipping link: none of the wheel's tags match: cp37-cp37m-manylinux2010_i686: https://files.pythonhosted.org/packages/2e/34/9ed714b333e197977ba3f7495ef69eb8ba4589fe7d5603af4b4ba8aaaf52/strainge-1.0-cp37-cp37m-manylinux2010_i686.whl#sha256=6a1c596f2c371f0a4c39b4804f891328e6087edc9d1181a5a16467fcec4d8cdf (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,465   Skipping link: none of the wheel's tags match: cp37-cp37m-manylinux2010_x86_64: https://files.pythonhosted.org/packages/54/ca/9d0b963b27dcd02215de089aff820aff94a1311e5cf49fb16190ed3d51b7/strainge-1.0-cp37-cp37m-manylinux2010_x86_64.whl#sha256=f50ba07af45c3a8803755161764bcab7cf5aa2791319a5520f564410cd49f9d4 (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,465   Skipping link: none of the wheel's tags match: cp38-cp38-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/85/68/3983cf0f0761ba233064852cac7b7a35a240eacbbd180b22192e3bacfbe0/strainge-1.0-cp38-cp38-macosx_10_9_x86_64.whl#sha256=f65b1a68dc65654ff43c25d46bbb26b0dbe4d8f4604841802bf93c6c8c736eb8 (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,465   Skipping link: none of the wheel's tags match: cp38-cp38-manylinux2010_i686: https://files.pythonhosted.org/packages/9c/80/e3e2a7751273704909a52a3fb38bb17ecdc039df0caef333b633b79e6d21/strainge-1.0-cp38-cp38-manylinux2010_i686.whl#sha256=9fd50b8a028b68f9fde04937e26f26596a78e34307167139cffb418df7f12591 (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,466   Skipping link: none of the wheel's tags match: cp38-cp38-manylinux2010_x86_64: https://files.pythonhosted.org/packages/22/4f/b692a79bf9fe299d65176488f39255acd55efc41cc029ca3ba1d021f1543/strainge-1.0-cp38-cp38-manylinux2010_x86_64.whl#sha256=547b92a5f8a0d9b5f6d28f89d3068d5acfc3650761bcb1a88ac856baf48d235b (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,466   Skipping link: none of the wheel's tags match: cp39-cp39-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/14/82/0df3b9131c6ebb989d9086d82ee14203ce3f43c71c6f938ff1c46f339ce4/strainge-1.0-cp39-cp39-macosx_10_9_x86_64.whl#sha256=645d7c95c4d4c490001006dc56c589befa032900af34c4809f1aae9b66d25ca3 (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,467   Skipping link: none of the wheel's tags match: cp39-cp39-manylinux2010_i686: https://files.pythonhosted.org/packages/bc/92/19f2608ff23c1f7a49fdccab4131ce9b200b1715aacab8f4ec312392300a/strainge-1.0-cp39-cp39-manylinux2010_i686.whl#sha256=8e0ce90a1cfffe8c471b4802953d4a589030bb09e9310487156416b4fb3e0fa7 (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,467   Skipping link: none of the wheel's tags match: cp39-cp39-manylinux2010_x86_64: https://files.pythonhosted.org/packages/83/c0/b230d5dd0a08a254e5bc2f199f55f817d6ac6e90214e6b32d027d331c586/strainge-1.0-cp39-cp39-manylinux2010_x86_64.whl#sha256=9f5e00a7c11dc464f635d2b0c24c1ee13f7ba72d49f9e36ef17d2b7a588cf7b7 (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,467   Skipping link: none of the wheel's tags match: pp37-pypy37_pp73-macosx_10_9_x86_64: https://files.pythonhosted.org/packages/cc/d9/962f8647184ee7cd6ce8acd8131c842694916cbe72180bdbf9662a217624/strainge-1.0-pp37-pypy37_pp73-macosx_10_9_x86_64.whl#sha256=d330e72a1f1303db078680f29c3cf20ae5df74c75ee00a9541a280b56111f39b (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,468   Skipping link: none of the wheel's tags match: pp37-pypy37_pp73-manylinux2010_x86_64: https://files.pythonhosted.org/packages/30/e8/82b0d6abba240a4ec3dfa3fa6620cac567cc4527ec358b289d4ad941f6da/strainge-1.0-pp37-pypy37_pp73-manylinux2010_x86_64.whl#sha256=69a64532513863ef01815467bd3ab9c40937b550114bc234aacc89e25f8d5430 (from https://pypi.org/simple/strainge/) (requires-python:>=3.7)
2021-02-11T00:03:39,468   Found link https://files.pythonhosted.org/packages/52/ed/58afada9f830e66b5e7e535501f7412f4eda06fbd1c8745baf2d772f365e/strainge-1.0.tar.gz#sha256=50ba0b0eaa5179d24be0b44b3ff3c1f4787041619f8d9fc442c13020bbe9990e (from https://pypi.org/simple/strainge/) (requires-python:>=3.7), version: 1.0
2021-02-11T00:03:39,469 Given no hashes to check 1 links for project 'strainge': discarding no candidates
2021-02-11T00:03:39,484 Collecting strainge==1.0
2021-02-11T00:03:39,485   Created temporary directory: /tmp/pip-unpack-irmqeic9
2021-02-11T00:03:39,659   Downloading strainge-1.0.tar.gz (95 kB)
2021-02-11T00:03:39,817   Added strainge==1.0 from https://files.pythonhosted.org/packages/52/ed/58afada9f830e66b5e7e535501f7412f4eda06fbd1c8745baf2d772f365e/strainge-1.0.tar.gz#sha256=50ba0b0eaa5179d24be0b44b3ff3c1f4787041619f8d9fc442c13020bbe9990e to build tracker '/tmp/pip-req-tracker-81ki9027'
2021-02-11T00:03:39,818     Running setup.py (path:/tmp/pip-wheel-rwjd5ks2/strainge_73486f6999254a8aa563df172fc4583e/setup.py) egg_info for package strainge
2021-02-11T00:03:39,819     Created temporary directory: /tmp/pip-pip-egg-info-k8glbrnj
2021-02-11T00:03:39,819     Running command python setup.py egg_info
2021-02-11T00:03:41,123     running egg_info
2021-02-11T00:03:41,125     creating /tmp/pip-pip-egg-info-k8glbrnj/strainge.egg-info
2021-02-11T00:03:41,126     writing /tmp/pip-pip-egg-info-k8glbrnj/strainge.egg-info/PKG-INFO
2021-02-11T00:03:41,130     writing dependency_links to /tmp/pip-pip-egg-info-k8glbrnj/strainge.egg-info/dependency_links.txt
2021-02-11T00:03:41,131     writing entry points to /tmp/pip-pip-egg-info-k8glbrnj/strainge.egg-info/entry_points.txt
2021-02-11T00:03:41,133     writing requirements to /tmp/pip-pip-egg-info-k8glbrnj/strainge.egg-info/requires.txt
2021-02-11T00:03:41,134     writing top-level names to /tmp/pip-pip-egg-info-k8glbrnj/strainge.egg-info/top_level.txt
2021-02-11T00:03:41,136     writing manifest file '/tmp/pip-pip-egg-info-k8glbrnj/strainge.egg-info/SOURCES.txt'
2021-02-11T00:03:41,149     reading manifest file '/tmp/pip-pip-egg-info-k8glbrnj/strainge.egg-info/SOURCES.txt'
2021-02-11T00:03:41,151     reading manifest template 'MANIFEST.in'
2021-02-11T00:03:41,191     writing manifest file '/tmp/pip-pip-egg-info-k8glbrnj/strainge.egg-info/SOURCES.txt'
2021-02-11T00:03:41,193     /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'long_desription'
2021-02-11T00:03:41,193       warnings.warn(msg)
2021-02-11T00:03:41,194     /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'utl'
2021-02-11T00:03:41,194       warnings.warn(msg)
2021-02-11T00:03:41,267   Source in /tmp/pip-wheel-rwjd5ks2/strainge_73486f6999254a8aa563df172fc4583e has version 1.0, which satisfies requirement strainge==1.0 from https://files.pythonhosted.org/packages/52/ed/58afada9f830e66b5e7e535501f7412f4eda06fbd1c8745baf2d772f365e/strainge-1.0.tar.gz#sha256=50ba0b0eaa5179d24be0b44b3ff3c1f4787041619f8d9fc442c13020bbe9990e
2021-02-11T00:03:41,268   Removed strainge==1.0 from https://files.pythonhosted.org/packages/52/ed/58afada9f830e66b5e7e535501f7412f4eda06fbd1c8745baf2d772f365e/strainge-1.0.tar.gz#sha256=50ba0b0eaa5179d24be0b44b3ff3c1f4787041619f8d9fc442c13020bbe9990e from build tracker '/tmp/pip-req-tracker-81ki9027'
2021-02-11T00:03:41,274 Created temporary directory: /tmp/pip-unpack-vv8xtcbg
2021-02-11T00:03:41,274 Building wheels for collected packages: strainge
2021-02-11T00:03:41,279   Created temporary directory: /tmp/pip-wheel-il_pd_xg
2021-02-11T00:03:41,279   Building wheel for strainge (setup.py): started
2021-02-11T00:03:41,279   Destination directory: /tmp/pip-wheel-il_pd_xg
2021-02-11T00:03:41,280   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-rwjd5ks2/strainge_73486f6999254a8aa563df172fc4583e/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-rwjd5ks2/strainge_73486f6999254a8aa563df172fc4583e/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-il_pd_xg
2021-02-11T00:03:42,411   /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'long_desription'
2021-02-11T00:03:42,412     warnings.warn(msg)
2021-02-11T00:03:42,413   /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'utl'
2021-02-11T00:03:42,413     warnings.warn(msg)
2021-02-11T00:03:42,536   running bdist_wheel
2021-02-11T00:03:42,541   running build
2021-02-11T00:03:42,541   running build_py
2021-02-11T00:03:42,547   creating build
2021-02-11T00:03:42,548   creating build/lib.linux-armv7l-3.7
2021-02-11T00:03:42,548   creating build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,551   copying src/strainge/cluster.py -> build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,554   copying src/strainge/variant_caller.py -> build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,557   copying src/strainge/search_tool.py -> build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,560   copying src/strainge/comparison.py -> build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,561   copying src/strainge/utils.py -> build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,564   copying src/strainge/_version.py -> build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,566   copying src/strainge/sample_compare.py -> build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,568   copying src/strainge/__init__.py -> build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,570   copying src/strainge/kmertools.py -> build/lib.linux-armv7l-3.7/strainge
2021-02-11T00:03:42,574   creating build/lib.linux-armv7l-3.7/strainge/io
2021-02-11T00:03:42,575   copying src/strainge/io/variants.py -> build/lib.linux-armv7l-3.7/strainge/io
2021-02-11T00:03:42,578   copying src/strainge/io/utils.py -> build/lib.linux-armv7l-3.7/strainge/io
2021-02-11T00:03:42,580   copying src/strainge/io/comparisons.py -> build/lib.linux-armv7l-3.7/strainge/io
2021-02-11T00:03:42,583   copying src/strainge/io/__init__.py -> build/lib.linux-armv7l-3.7/strainge/io
2021-02-11T00:03:42,586   creating build/lib.linux-armv7l-3.7/strainge/cli
2021-02-11T00:03:42,586   copying src/strainge/cli/straingst.py -> build/lib.linux-armv7l-3.7/strainge/cli
2021-02-11T00:03:42,589   copying src/strainge/cli/registry.py -> build/lib.linux-armv7l-3.7/strainge/cli
2021-02-11T00:03:42,591   copying src/strainge/cli/straingr.py -> build/lib.linux-armv7l-3.7/strainge/cli
2021-02-11T00:03:42,595   copying src/strainge/cli/__init__.py -> build/lib.linux-armv7l-3.7/strainge/cli
2021-02-11T00:03:42,597   copying src/strainge/cli/kmersets.py -> build/lib.linux-armv7l-3.7/strainge/cli
2021-02-11T00:03:42,600   copying src/strainge/cli/main.py -> build/lib.linux-armv7l-3.7/strainge/cli
2021-02-11T00:03:42,602   running egg_info
2021-02-11T00:03:42,611   writing src/strainge.egg-info/PKG-INFO
2021-02-11T00:03:42,613   writing dependency_links to src/strainge.egg-info/dependency_links.txt
2021-02-11T00:03:42,615   writing entry points to src/strainge.egg-info/entry_points.txt
2021-02-11T00:03:42,617   writing requirements to src/strainge.egg-info/requires.txt
2021-02-11T00:03:42,618   writing top-level names to src/strainge.egg-info/top_level.txt
2021-02-11T00:03:42,627   reading manifest file 'src/strainge.egg-info/SOURCES.txt'
2021-02-11T00:03:42,630   reading manifest template 'MANIFEST.in'
2021-02-11T00:03:42,668   writing manifest file 'src/strainge.egg-info/SOURCES.txt'
2021-02-11T00:03:42,672   UPDATING build/lib.linux-armv7l-3.7/strainge/_version.py
2021-02-11T00:03:42,674   set build/lib.linux-armv7l-3.7/strainge/_version.py to '1.0'
2021-02-11T00:03:42,674   running build_ext
2021-02-11T00:03:42,682   creating tmp
2021-02-11T00:03:42,682   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c /tmp/tmp1r0pehx6.cpp -o tmp/tmp1r0pehx6.o -std=c++14
2021-02-11T00:03:42,773   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.7m -c /tmp/tmpugi1cu4x.cpp -o tmp/tmpugi1cu4x.o -fvisibility=hidden
2021-02-11T00:03:42,854   building 'strainge.kmerizer' extension
2021-02-11T00:03:42,875   creating build/temp.linux-armv7l-3.7
2021-02-11T00:03:42,876   creating build/temp.linux-armv7l-3.7/src
2021-02-11T00:03:42,877   creating build/temp.linux-armv7l-3.7/src/kmerizer
2021-02-11T00:03:42,878   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.7/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.7/site-packages/pybind11/include -I/usr/include/python3.7m -c src/kmerizer/main.cpp -o build/temp.linux-armv7l-3.7/src/kmerizer/main.o -DVERSION_INFO="1.0" -std=c++14 -fvisibility=hidden
2021-02-11T00:04:11,811   arm-linux-gnueabihf-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/home/piwheels/.local/lib/python3.7/site-packages/pybind11/include -I/home/piwheels/.local/lib/python3.7/site-packages/pybind11/include -I/usr/include/python3.7m -c src/kmerizer/kmerizer.cpp -o build/temp.linux-armv7l-3.7/src/kmerizer/kmerizer.o -DVERSION_INFO="1.0" -std=c++14 -fvisibility=hidden
2021-02-11T00:04:15,342   src/kmerizer/kmerizer.cpp: In function ‘std::size_t strainge::kmerize_into_array(int, const string&, strainge::kmerset_t&, unsigned int)’:
2021-02-11T00:04:15,343   src/kmerizer/kmerizer.cpp:94:34: warning: comparison of integer expressions of different signedness: ‘std::vector<long long unsigned int>::size_type’ {aka ‘unsigned int’} and ‘pybind11::ssize_t’ {aka ‘int’} [-Wsign-compare]
2021-02-11T00:04:15,343            if(kmers.size() + offset > out_array.shape(0)) {
2021-02-11T00:04:15,343               ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
2021-02-11T00:04:21,476   In file included from /usr/include/c++/8/vector:69,
2021-02-11T00:04:21,476                    from src/kmerizer/kmerizer.cpp:5:
2021-02-11T00:04:21,477   /usr/include/c++/8/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]’:
2021-02-11T00:04:21,477   /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type ‘std::vector<long long unsigned int>::iterator’ {aka ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’} changed in GCC 7.1
2021-02-11T00:04:21,477          vector<_Tp, _Alloc>::
2021-02-11T00:04:21,477          ^~~~~~~~~~~~~~~~~~~
2021-02-11T00:04:21,522   In file included from /usr/include/c++/8/vector:64,
2021-02-11T00:04:21,522                    from src/kmerizer/kmerizer.cpp:5:
2021-02-11T00:04:21,522   /usr/include/c++/8/bits/stl_vector.h: In function ‘std::vector<long long unsigned int> strainge::kmerize_internal(int, const string&)’:
2021-02-11T00:04:21,522   /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >’ changed in GCC 7.1
2021-02-11T00:04:21,523       _M_realloc_insert(end(), __x);
2021-02-11T00:04:21,523       ^~~~~~~~~~~~~~~~~
2021-02-11T00:04:33,966   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -g -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.7/src/kmerizer/main.o build/temp.linux-armv7l-3.7/src/kmerizer/kmerizer.o -o build/lib.linux-armv7l-3.7/strainge/kmerizer.cpython-37m-arm-linux-gnueabihf.so -DVERSION_INFO="1.0" -std=c++14 -fvisibility=hidden
2021-02-11T00:04:34,760   running build_scripts
2021-02-11T00:04:34,760   creating build/scripts-3.7
2021-02-11T00:04:34,762   copying and adjusting bin/kmerseq -> build/scripts-3.7
2021-02-11T00:04:34,765   copying and adjusting bin/kmercoverage -> build/scripts-3.7
2021-02-11T00:04:34,767   copying and adjusting bin/kmersimilarity -> build/scripts-3.7
2021-02-11T00:04:34,769   copying and adjusting bin/kmerspectrum -> build/scripts-3.7
2021-02-11T00:04:34,771   copying and adjusting bin/kmertree -> build/scripts-3.7
2021-02-11T00:04:34,774   copying and adjusting bin/treepath -> build/scripts-3.7
2021-02-11T00:04:34,778   copying and adjusting bin/pankmer -> build/scripts-3.7
2021-02-11T00:04:34,780   copying and adjusting bin/refseq-download -> build/scripts-3.7
2021-02-11T00:04:34,783   copying and adjusting bin/refseq-extract -> build/scripts-3.7
2021-02-11T00:04:34,784   changing mode of build/scripts-3.7/kmerseq from 644 to 755
2021-02-11T00:04:34,785   changing mode of build/scripts-3.7/kmercoverage from 644 to 755
2021-02-11T00:04:34,785   changing mode of build/scripts-3.7/kmersimilarity from 644 to 755
2021-02-11T00:04:34,786   changing mode of build/scripts-3.7/kmerspectrum from 644 to 755
2021-02-11T00:04:34,786   changing mode of build/scripts-3.7/kmertree from 644 to 755
2021-02-11T00:04:34,786   changing mode of build/scripts-3.7/treepath from 644 to 755
2021-02-11T00:04:34,787   changing mode of build/scripts-3.7/pankmer from 644 to 755
2021-02-11T00:04:34,787   changing mode of build/scripts-3.7/refseq-download from 644 to 755
2021-02-11T00:04:34,787   changing mode of build/scripts-3.7/refseq-extract from 644 to 755
2021-02-11T00:04:34,792   installing to build/bdist.linux-armv7l/wheel
2021-02-11T00:04:34,792   running install
2021-02-11T00:04:34,794   running install_lib
2021-02-11T00:04:34,798   creating build/bdist.linux-armv7l
2021-02-11T00:04:34,799   creating build/bdist.linux-armv7l/wheel
2021-02-11T00:04:34,801   creating build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:34,802   copying build/lib.linux-armv7l-3.7/strainge/cluster.py -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:34,805   copying build/lib.linux-armv7l-3.7/strainge/variant_caller.py -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:34,808   copying build/lib.linux-armv7l-3.7/strainge/search_tool.py -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:34,810   copying build/lib.linux-armv7l-3.7/strainge/comparison.py -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:34,813   creating build/bdist.linux-armv7l/wheel/strainge/io
2021-02-11T00:04:34,814   copying build/lib.linux-armv7l-3.7/strainge/io/variants.py -> build/bdist.linux-armv7l/wheel/strainge/io
2021-02-11T00:04:34,817   copying build/lib.linux-armv7l-3.7/strainge/io/utils.py -> build/bdist.linux-armv7l/wheel/strainge/io
2021-02-11T00:04:34,819   copying build/lib.linux-armv7l-3.7/strainge/io/comparisons.py -> build/bdist.linux-armv7l/wheel/strainge/io
2021-02-11T00:04:34,822   copying build/lib.linux-armv7l-3.7/strainge/io/__init__.py -> build/bdist.linux-armv7l/wheel/strainge/io
2021-02-11T00:04:34,824   copying build/lib.linux-armv7l-3.7/strainge/utils.py -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:34,827   creating build/bdist.linux-armv7l/wheel/strainge/cli
2021-02-11T00:04:34,828   copying build/lib.linux-armv7l-3.7/strainge/cli/straingst.py -> build/bdist.linux-armv7l/wheel/strainge/cli
2021-02-11T00:04:34,831   copying build/lib.linux-armv7l-3.7/strainge/cli/registry.py -> build/bdist.linux-armv7l/wheel/strainge/cli
2021-02-11T00:04:34,833   copying build/lib.linux-armv7l-3.7/strainge/cli/straingr.py -> build/bdist.linux-armv7l/wheel/strainge/cli
2021-02-11T00:04:34,836   copying build/lib.linux-armv7l-3.7/strainge/cli/__init__.py -> build/bdist.linux-armv7l/wheel/strainge/cli
2021-02-11T00:04:34,839   copying build/lib.linux-armv7l-3.7/strainge/cli/kmersets.py -> build/bdist.linux-armv7l/wheel/strainge/cli
2021-02-11T00:04:34,842   copying build/lib.linux-armv7l-3.7/strainge/cli/main.py -> build/bdist.linux-armv7l/wheel/strainge/cli
2021-02-11T00:04:34,844   copying build/lib.linux-armv7l-3.7/strainge/_version.py -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:34,846   copying build/lib.linux-armv7l-3.7/strainge/kmerizer.cpython-37m-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:35,055   copying build/lib.linux-armv7l-3.7/strainge/sample_compare.py -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:35,059   copying build/lib.linux-armv7l-3.7/strainge/__init__.py -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:35,063   copying build/lib.linux-armv7l-3.7/strainge/kmertools.py -> build/bdist.linux-armv7l/wheel/strainge
2021-02-11T00:04:35,068   running install_egg_info
2021-02-11T00:04:35,079   Copying src/strainge.egg-info to build/bdist.linux-armv7l/wheel/strainge-1.0-py3.7.egg-info
2021-02-11T00:04:35,098   running install_scripts
2021-02-11T00:04:35,162   creating build/bdist.linux-armv7l/wheel/strainge-1.0.data
2021-02-11T00:04:35,162   creating build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,164   copying build/scripts-3.7/kmertree -> build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,167   copying build/scripts-3.7/kmerspectrum -> build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,169   copying build/scripts-3.7/kmercoverage -> build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,172   copying build/scripts-3.7/kmersimilarity -> build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,175   copying build/scripts-3.7/refseq-download -> build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,177   copying build/scripts-3.7/pankmer -> build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,180   copying build/scripts-3.7/treepath -> build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,183   copying build/scripts-3.7/refseq-extract -> build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,186   copying build/scripts-3.7/kmerseq -> build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts
2021-02-11T00:04:35,189   changing mode of build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts/kmertree to 755
2021-02-11T00:04:35,190   changing mode of build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts/kmerspectrum to 755
2021-02-11T00:04:35,190   changing mode of build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts/kmercoverage to 755
2021-02-11T00:04:35,191   changing mode of build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts/kmersimilarity to 755
2021-02-11T00:04:35,192   changing mode of build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts/refseq-download to 755
2021-02-11T00:04:35,193   changing mode of build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts/pankmer to 755
2021-02-11T00:04:35,193   changing mode of build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts/treepath to 755
2021-02-11T00:04:35,194   changing mode of build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts/refseq-extract to 755
2021-02-11T00:04:35,195   changing mode of build/bdist.linux-armv7l/wheel/strainge-1.0.data/scripts/kmerseq to 755
2021-02-11T00:04:35,227   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2021-02-11T00:04:35,234   creating build/bdist.linux-armv7l/wheel/strainge-1.0.dist-info/WHEEL
2021-02-11T00:04:35,238   creating '/tmp/pip-wheel-il_pd_xg/strainge-1.0-cp37-cp37m-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2021-02-11T00:04:35,242   adding 'strainge/__init__.py'
2021-02-11T00:04:35,244   adding 'strainge/_version.py'
2021-02-11T00:04:35,246   adding 'strainge/cluster.py'
2021-02-11T00:04:35,249   adding 'strainge/comparison.py'
2021-02-11T00:04:36,076   adding 'strainge/kmerizer.cpython-37m-arm-linux-gnueabihf.so'
2021-02-11T00:04:36,111   adding 'strainge/kmertools.py'
2021-02-11T00:04:36,114   adding 'strainge/sample_compare.py'
2021-02-11T00:04:36,117   adding 'strainge/search_tool.py'
2021-02-11T00:04:36,119   adding 'strainge/utils.py'
2021-02-11T00:04:36,124   adding 'strainge/variant_caller.py'
2021-02-11T00:04:36,127   adding 'strainge/cli/__init__.py'
2021-02-11T00:04:36,130   adding 'strainge/cli/kmersets.py'
2021-02-11T00:04:36,133   adding 'strainge/cli/main.py'
2021-02-11T00:04:36,134   adding 'strainge/cli/registry.py'
2021-02-11T00:04:36,139   adding 'strainge/cli/straingr.py'
2021-02-11T00:04:36,142   adding 'strainge/cli/straingst.py'
2021-02-11T00:04:36,144   adding 'strainge/io/__init__.py'
2021-02-11T00:04:36,146   adding 'strainge/io/comparisons.py'
2021-02-11T00:04:36,148   adding 'strainge/io/utils.py'
2021-02-11T00:04:36,151   adding 'strainge/io/variants.py'
2021-02-11T00:04:36,154   adding 'strainge-1.0.data/scripts/kmercoverage'
2021-02-11T00:04:36,156   adding 'strainge-1.0.data/scripts/kmerseq'
2021-02-11T00:04:36,158   adding 'strainge-1.0.data/scripts/kmersimilarity'
2021-02-11T00:04:36,160   adding 'strainge-1.0.data/scripts/kmerspectrum'
2021-02-11T00:04:36,163   adding 'strainge-1.0.data/scripts/kmertree'
2021-02-11T00:04:36,165   adding 'strainge-1.0.data/scripts/pankmer'
2021-02-11T00:04:36,167   adding 'strainge-1.0.data/scripts/refseq-download'
2021-02-11T00:04:36,169   adding 'strainge-1.0.data/scripts/refseq-extract'
2021-02-11T00:04:36,174   adding 'strainge-1.0.data/scripts/treepath'
2021-02-11T00:04:36,178   adding 'strainge-1.0.dist-info/LICENSE'
2021-02-11T00:04:36,179   adding 'strainge-1.0.dist-info/METADATA'
2021-02-11T00:04:36,181   adding 'strainge-1.0.dist-info/WHEEL'
2021-02-11T00:04:36,182   adding 'strainge-1.0.dist-info/entry_points.txt'
2021-02-11T00:04:36,183   adding 'strainge-1.0.dist-info/top_level.txt'
2021-02-11T00:04:36,185   adding 'strainge-1.0.dist-info/RECORD'
2021-02-11T00:04:36,318   removing build/bdist.linux-armv7l/wheel
2021-02-11T00:04:36,425   Building wheel for strainge (setup.py): finished with status 'done'
2021-02-11T00:04:36,469   Created wheel for strainge: filename=strainge-1.0-cp37-cp37m-linux_armv7l.whl size=1679042 sha256=5eea5646598684f9c1454098911f928293afe4a6cc311951112e7c5f0a47efcc
2021-02-11T00:04:36,470   Stored in directory: /tmp/pip-ephem-wheel-cache-y4sd57hi/wheels/58/e5/3d/75e5c171130a4c8159f673a85c4dfe43bfd74cef9915db5e3e
2021-02-11T00:04:36,480 Successfully built strainge
2021-02-11T00:04:36,668 Removed build tracker: '/tmp/pip-req-tracker-81ki9027'