2021-07-10T09:38:26,754 Created temporary directory: /tmp/pip-ephem-wheel-cache-9z3bil5r 2021-07-10T09:38:26,757 Created temporary directory: /tmp/pip-req-tracker-d63w394r 2021-07-10T09:38:26,757 Initialized build tracking at /tmp/pip-req-tracker-d63w394r 2021-07-10T09:38:26,757 Created build tracker: /tmp/pip-req-tracker-d63w394r 2021-07-10T09:38:26,758 Entered build tracker: /tmp/pip-req-tracker-d63w394r 2021-07-10T09:38:26,758 Created temporary directory: /tmp/pip-wheel-x4_n5mer 2021-07-10T09:38:26,791 1 location(s) to search for versions of hdbscan: 2021-07-10T09:38:26,791 * https://pypi.org/simple/hdbscan/ 2021-07-10T09:38:26,792 Fetching project page and analyzing links: https://pypi.org/simple/hdbscan/ 2021-07-10T09:38:26,792 Getting page https://pypi.org/simple/hdbscan/ 2021-07-10T09:38:26,794 Found index url https://pypi.org/simple 2021-07-10T09:38:26,924 Found link https://files.pythonhosted.org/packages/0e/f4/e510423453abeb980c08fc945a79e14a3d176e8da809428cb392b39b80f8/hdbscan-0.1.tar.gz#sha256=78fbfb547c7037c688a53e50faf55e8421e7e3e404880e255c2b3c844e56ce38 (from https://pypi.org/simple/hdbscan/), version: 0.1 2021-07-10T09:38:26,925 Found link https://files.pythonhosted.org/packages/52/90/d800ecebd7f879a5add97fe69855ea70845dc4cd00b47992c4fd605e3c18/hdbscan-0.2.tar.gz#sha256=240d86220151287d6653ad2d597a07e47550ae15a13d735a87e9aef11eb522ac (from https://pypi.org/simple/hdbscan/), version: 0.2 2021-07-10T09:38:26,925 Found link https://files.pythonhosted.org/packages/6d/2c/795b0075ffbe77e3743318041ad4dc17cb239b35c12816b888a4107430a9/hdbscan-0.3.tar.gz#sha256=33f2c8cb752a67ce98de29bc6c873733bc832b7198b89e34c2bdf59af349ee9b (from https://pypi.org/simple/hdbscan/), version: 0.3 2021-07-10T09:38:26,925 Found link https://files.pythonhosted.org/packages/f8/eb/4f1955468aee4baa289f5e44a6a5e98893d62fd53a3f2125324a7fdbe4ea/hdbscan-0.3.1.tar.gz#sha256=e9f27460169e3180bf53144ee1c7d777eb26283bb41760bf1235a9db5d0a9cc1 (from https://pypi.org/simple/hdbscan/), version: 0.3.1 2021-07-10T09:38:26,926 Found link https://files.pythonhosted.org/packages/14/97/4beb7d568d31a7a77988e30392e75a683b0079c67134c6160a31fbff67df/hdbscan-0.4.tar.gz#sha256=f06c5adc99430faef92db1f1a714d60b2472bc3dc52fbe3aa11a8c5400abee3c (from https://pypi.org/simple/hdbscan/), version: 0.4 2021-07-10T09:38:26,926 Found link https://files.pythonhosted.org/packages/96/38/8cb3f592d6a0ecae280de5c6541c596efe5955d0667a7108f79c58045891/hdbscan-0.4.1.tar.gz#sha256=385b8c40d64afd7d1aa88d82bcaa21ce835c7c764a55d64f57b0d7ff28d7835b (from https://pypi.org/simple/hdbscan/), version: 0.4.1 2021-07-10T09:38:26,927 Found link https://files.pythonhosted.org/packages/bc/f4/eb35caaaa44301d900ba2daeb4dc840227a87ef892be63206afd080ba5f4/hdbscan-0.4.2.tar.gz#sha256=a64a803d264d87d3d8d55c65895425daf0a891ae7dae00142256c4c773bc86f8 (from https://pypi.org/simple/hdbscan/), version: 0.4.2 2021-07-10T09:38:26,927 Found link https://files.pythonhosted.org/packages/df/7c/18bb68c63b5c769ce589a9adc7440d1ffdb37ffdb1c240ba961e49fe0fb7/hdbscan-0.5.tar.gz#sha256=cca458676b8ebc1f8639b19d53cbc4247f4a81a3de50de5550e3555be4d416d3 (from https://pypi.org/simple/hdbscan/), version: 0.5 2021-07-10T09:38:26,927 Found link https://files.pythonhosted.org/packages/8f/ea/9e3249b657a14dfdbe4a17327bc9f618f7e5862a8b243091cb600f55a1e9/hdbscan-0.6.tar.gz#sha256=91916be37c40b833ea1f2795505b4ac6b8f23cfb78143dc877a9a1896fb29033 (from https://pypi.org/simple/hdbscan/), version: 0.6 2021-07-10T09:38:26,928 Found link https://files.pythonhosted.org/packages/cd/76/00bde253896d4c5c48f7b3cc54890f1e4e0a0d55ea1ca1f8cc1855a5e971/hdbscan-0.6.1.tar.gz#sha256=e047518e4a718e23627710fe005da74e89461849c33df79ef7a06210a7bf90ff (from https://pypi.org/simple/hdbscan/), version: 0.6.1 2021-07-10T09:38:26,928 Found link https://files.pythonhosted.org/packages/d4/1b/59773fdad41e13220c4a8c517750cb9eef599fd7062f7b3c6bfd74ba0999/hdbscan-0.6.2.tar.gz#sha256=b73fef03f02efa791e0c79c760f39457bc074f34d7f417d1cbadabc1b5d23257 (from https://pypi.org/simple/hdbscan/), version: 0.6.2 2021-07-10T09:38:26,928 Found link https://files.pythonhosted.org/packages/bb/50/a036a86170c8f2f8010bf788d4ba58ac8173fbe4652157f29ffb0cf8fb4b/hdbscan-0.6.4.tar.gz#sha256=e457915b6924e389adaac953144f96e0a3bf5014a3ce5ba82fec35b41659ecd5 (from https://pypi.org/simple/hdbscan/), version: 0.6.4 2021-07-10T09:38:26,928 Found link https://files.pythonhosted.org/packages/fb/0f/ef55030d10f92bd5976cf0ccd019ecfa155194a67789db08f56999816eb3/hdbscan-0.6.5.tar.gz#sha256=f876fc68198eebb4adcf3c27a12125d5975c6d170fc37448acfe15677f25e213 (from https://pypi.org/simple/hdbscan/), version: 0.6.5 2021-07-10T09:38:26,929 Found link https://files.pythonhosted.org/packages/ae/ab/ca35909ece8943ff46eb7ce8b6cd5d8f10821219c906c57012396196de65/hdbscan-0.7.tar.gz#sha256=c9483a65496b0473c707a9aa7e42ccebf98106369675388b10b1b3daa7052a06 (from https://pypi.org/simple/hdbscan/), version: 0.7 2021-07-10T09:38:26,929 Found link https://files.pythonhosted.org/packages/c0/61/c151a26a07796168d2fa8089bfb80799113d701e032d9343719a602ef628/hdbscan-0.7.1.tar.gz#sha256=e78d431ccd2b8d42a0d222926d80c31773b6f5aee0705e8a7aea6f9f6cd32226 (from https://pypi.org/simple/hdbscan/), version: 0.7.1 2021-07-10T09:38:26,947 Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/40/d7/51e9f314105dfd7535ed7619b902a83f37842d7d196628aae6c62e2c3c11/hdbscan-0.7.2-cp35-cp35m-win_amd64.whl#sha256=27ebd4c570d88323db437f94cc79075e05e0000d067bc3c4a28c81857c9ef3fc (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,947 Found link https://files.pythonhosted.org/packages/15/bb/f0895b06cbbfa0a5de21fc73d0c6add4208e2202b22b8daf869e3ab9fb3d/hdbscan-0.7.2.tar.gz#sha256=46f4f5a65a4175ece49ad6acdd676fa56ef6c025d04c6941307b1a54cbaea868 (from https://pypi.org/simple/hdbscan/), version: 0.7.2 2021-07-10T09:38:26,948 Found link https://files.pythonhosted.org/packages/c4/06/79dd29633d18a941551663179e270e0f4d4c18e7a52e2efccc7fcfde00ee/hdbscan-0.7.3.tar.gz#sha256=dcc1695169eeb098a1fd308cec85cc005c71e3c0e4dc55ef96fc00913b542ad7 (from https://pypi.org/simple/hdbscan/), version: 0.7.3 2021-07-10T09:38:26,948 Found link https://files.pythonhosted.org/packages/8d/22/f399dbe11ab5d1a47a01d9f3378deb5d6a7e1f4aebf0cb5a901c90e7c964/hdbscan-0.8.tar.gz#sha256=ea09e8ad60a1734e46000e71cc4b4ca274629e5ed9c54015cf4d4150c1238a17 (from https://pypi.org/simple/hdbscan/), version: 0.8 2021-07-10T09:38:26,948 Found link https://files.pythonhosted.org/packages/c1/1b/7cb45e7b0bee9f98b98c969ebc4b61e02f25aa044e9ec92ef01a0758ced0/hdbscan-0.8.1.tar.gz#sha256=d2d0e1877469e6b098a1073f477c9ee82fc6fe7c87f7e43699402344c1b077ce (from https://pypi.org/simple/hdbscan/), version: 0.8.1 2021-07-10T09:38:26,949 Found link https://files.pythonhosted.org/packages/8d/8a/e33bf408e3a8563bccbd5d745eb0434dcc5fe5ef5f448dca9c63d1b761f9/hdbscan-0.8.2.tar.gz#sha256=8e711b3b874348a62fa44be127908102d39064988272b145678021b56a0bf553 (from https://pypi.org/simple/hdbscan/), version: 0.8.2 2021-07-10T09:38:26,949 Found link https://files.pythonhosted.org/packages/84/02/548fffd8ee4cffc9772025328f444fd03296152a4041d2008fc40a678583/hdbscan-0.8.3.tar.gz#sha256=b6561909ba0ffed8c75cd19bc0ffe827dd06570cf2f1fb2779d1404a76d14a85 (from https://pypi.org/simple/hdbscan/), version: 0.8.3 2021-07-10T09:38:26,949 Found link https://files.pythonhosted.org/packages/41/ee/1cadaa1059fce788e2c2061d05ddd153b8253b6db17728f4d161db07423d/hdbscan-0.8.4.tar.gz#sha256=85e8a82387d66a71b520a2d06af71d5a0a338e9c6b07b92aa04f85127159bbe6 (from https://pypi.org/simple/hdbscan/), version: 0.8.4 2021-07-10T09:38:26,949 Found link https://files.pythonhosted.org/packages/0a/cb/7c785d11c255ce6c66cf2f1762a590334b24adb0b138dd68ee6638e28bea/hdbscan-0.8.5.tar.gz#sha256=4d2051441db23744a80d0fee1f74710ecba129522a82b314e096c121a5c97be7 (from https://pypi.org/simple/hdbscan/), version: 0.8.5 2021-07-10T09:38:26,950 Found link https://files.pythonhosted.org/packages/0b/6b/92345411473586dce4a1d6a5eb796f522bb6b77193a0aac041251a66c8dd/hdbscan-0.8.7.tar.gz#sha256=3e2ba8387d935aceb12659fb6aa03db17d41962888332284630df650304dc126 (from https://pypi.org/simple/hdbscan/), version: 0.8.7 2021-07-10T09:38:26,950 Found link https://files.pythonhosted.org/packages/71/96/06ad6b873c7266608cc95450fad08d891addce9e315084dba4afd1bd9592/hdbscan-0.8.8.tar.gz#sha256=15838bc7eb75d35770d2cd5a926fa6ef2d58527db5cb66e7d172aa167ad2faf9 (from https://pypi.org/simple/hdbscan/), version: 0.8.8 2021-07-10T09:38:26,950 Found link https://files.pythonhosted.org/packages/6f/b4/fd29b472158b3d3a71ae7a94c7ade43e4b5197bb6eb89c94630f2282246c/hdbscan-0.8.10.tar.gz#sha256=76ed39e23022e3458c567191af1f127211661d6b1c17d73eac83f04405a4dc5b (from https://pypi.org/simple/hdbscan/), version: 0.8.10 2021-07-10T09:38:26,951 Found link https://files.pythonhosted.org/packages/d4/13/b0437bd09c7518005732e1f0496ff76a2911bfbd74b8f78fb435355c6490/hdbscan-0.8.11.tar.gz#sha256=5bc6f5e5c70612394408843697b9566b4e4feae95b9191656b82d8f8816cbf13 (from https://pypi.org/simple/hdbscan/), version: 0.8.11 2021-07-10T09:38:26,951 Found link https://files.pythonhosted.org/packages/c5/98/680ad89a479718ce9647def217dd86240cd4e192ff0f1e7d0b1fc093e01e/hdbscan-0.8.12.tar.gz#sha256=39620799b408aa1e1a1297b84b70437ddd821ff1589044e5f65c8a971d19b17b (from https://pypi.org/simple/hdbscan/), version: 0.8.12 2021-07-10T09:38:26,952 Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_10_intel, cp27-cp27m-macosx_10_10_x86_64, cp27-cp27m-macosx_10_6_intel, cp27-cp27m-macosx_10_9_intel, cp27-cp27m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/2c/58/d726d97406c396e9afc0545cb29b107f19b1c2bc2b152ff32dc55e2ccd78/hdbscan-0.8.13-cp27-cp27m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl#sha256=2aa455802783e55c7f43621da1c57be708495c8adc2e3afa7238c58d6900a79e (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,952 Skipping link: none of the wheel's tags (cp27-cp27m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4f/b4/6e3d1ddce7fab804ee34f07be27fc31e7524ba4c52c08c7a6f7d8f78ea61/hdbscan-0.8.13-cp27-cp27m-manylinux1_x86_64.whl#sha256=47d158fc3c874e482ba435375d2fa812cd0f411d246ee9ecc2eb753092c7403f (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,952 Skipping link: none of the wheel's tags (cp27-cp27m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/1c/7a/ef368814757252b4eb17bca30cfbd3b27367d674162897bf7f38df9a19b2/hdbscan-0.8.13-cp27-cp27m-win_amd64.whl#sha256=fae879b6cd7a2b66186c1ccac4741ce2e954bc4436d6c91c2d6592815ebdba0d (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,953 Skipping link: none of the wheel's tags (cp27-cp27mu-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/4c/fc/8fd3783d1d6a0976c80f917278039dc88446283a82ab80ddb49794e0d9d6/hdbscan-0.8.13-cp27-cp27mu-manylinux1_x86_64.whl#sha256=be70ba8fa957a949b1cfbfc776de9ee9a4f9777d9cfb3619d4fa3df47434f54f (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,953 Skipping link: none of the wheel's tags (cp34-cp34m-macosx_10_10_intel, cp34-cp34m-macosx_10_10_x86_64, cp34-cp34m-macosx_10_6_intel, cp34-cp34m-macosx_10_9_intel, cp34-cp34m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/b2/5f/1fc1e47c3480f9ac93c31a5bf72eeaa652fe2e10274aee68d3bad30ec056/hdbscan-0.8.13-cp34-cp34m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl#sha256=733c7a56b0334beb2920ffdeee27caa1f0efdcbd8affa3a5a633d0e787eb4579 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,954 Skipping link: none of the wheel's tags (cp34-cp34m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/31/ea/b7f9eb40d30647d5bd67b94f7ca2de0be739805a50954ba7dfbc73e6670e/hdbscan-0.8.13-cp34-cp34m-manylinux1_x86_64.whl#sha256=e73d76bc5bff6f9681d6457bd5293b6e3e4305a1bf1ec73a21c93ccf8be8c2a2 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,954 Skipping link: none of the wheel's tags (cp35-cp35m-macosx_10_10_intel, cp35-cp35m-macosx_10_10_x86_64, cp35-cp35m-macosx_10_6_intel, cp35-cp35m-macosx_10_9_intel, cp35-cp35m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/01/a9/0c0bea6c26510d12b6e9c700c71e34a04f44e96a73ee3b12a710e14a6025/hdbscan-0.8.13-cp35-cp35m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl#sha256=8050feab742d867e4d31ea19ad06cd02d50a905e81659120abad2f6bb2cbbd07 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,955 Skipping link: none of the wheel's tags (cp35-cp35m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/45/b3/bbf643cb13e2a9ab52d59784593b54039f226c1b2962496f7fa129cd3122/hdbscan-0.8.13-cp35-cp35m-manylinux1_x86_64.whl#sha256=f5ffe71297e2829d976baf393b298e8ec7019435e38e24856dd6166c0376f1e7 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,955 Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/25/21/8fdfd0742b8cfdd3a07d52c7da9bb4789b3353ec98527331eddb6ab8a364/hdbscan-0.8.13-cp35-cp35m-win_amd64.whl#sha256=a06504fae32e0787b07309fa3cdfd54d69f09abd22b6ef93d75f76692cd0bd57 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,956 Skipping link: none of the wheel's tags (cp36-cp36m-macosx_10_10_intel, cp36-cp36m-macosx_10_10_x86_64, cp36-cp36m-macosx_10_6_intel, cp36-cp36m-macosx_10_9_intel, cp36-cp36m-macosx_10_9_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/84/ba/4461933c237cb98e634273deb43c7b0887dc38bb4dceb6648fe8d97460db/hdbscan-0.8.13-cp36-cp36m-macosx_10_6_intel.macosx_10_9_intel.macosx_10_9_x86_64.macosx_10_10_intel.macosx_10_10_x86_64.whl#sha256=9a38c12c0c3baeb07428c96c8516dbcb59b4fa91fda639f7ea12972dd8c53796 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,956 Skipping link: none of the wheel's tags (cp36-cp36m-manylinux1_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/c6/82/033d23724c26d133e106c5509f23ca40cd59e9a0652dd7d316f28904c276/hdbscan-0.8.13-cp36-cp36m-manylinux1_x86_64.whl#sha256=7c35439f5e87ed4bf9a3e955821b6e47123562e2d0db2860aba65bfd1393dd96 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,957 Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/d0/a6/42449ff6a6a1d13be1084c8da9b8464530747e8bac1c967d9384ba54dccc/hdbscan-0.8.13-cp36-cp36m-win_amd64.whl#sha256=dbd0401cf73752a64d6333439789e97ac5a3e4a3d5e099f6b5e5202993d7310a (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,957 Found link https://files.pythonhosted.org/packages/c7/6a/92ecddb0d8c28266d8d4f9ab6f58ee543059aaade98e73b35de44a1c99f9/hdbscan-0.8.13.tar.gz#sha256=31874db29375816688b5541287a051c9bd768f2499ccf1f6a4d88d266530e2a6 (from https://pypi.org/simple/hdbscan/), version: 0.8.13 2021-07-10T09:38:26,957 Found link https://files.pythonhosted.org/packages/19/11/9471a7fcc23b8a9d409646217b2cdb5ba260d0d691fd2fd691976a290225/hdbscan-0.8.14.tar.gz#sha256=0dcf42e1112bcf266e7a1d7ffbc16e6a4a0f4c58a0a371c7224de25413d83b56 (from https://pypi.org/simple/hdbscan/), version: 0.8.14 2021-07-10T09:38:26,958 Skipping link: none of the wheel's tags (cp27-cp27m-win32) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/56/1a/d2a3fc411c9ef00f6f5812cf6de33a42472e14783bb026b9686533490b30/hdbscan-0.8.15-cp27-cp27m-win32.whl#sha256=352a5c54c3f24f94c3d7623c3cc10ee81b052a5a1159e99e2f55e362aefee804 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,958 Skipping link: none of the wheel's tags (cp27-cp27m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/0f/89/a9daa1b4229e369eafd6215ce189da182789b05aeee186917c2dae2faba4/hdbscan-0.8.15-cp27-cp27m-win_amd64.whl#sha256=df344840efa7c89fdd835f999864f0e8a3edb5ab7e47114c76a27c3c9bcce692 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,958 Skipping link: none of the wheel's tags (cp35-cp35m-win32) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/84/17/4c01ff9161bef104914efd7bf0286c0b7ee9c748f268ced8db764e38139c/hdbscan-0.8.15-cp35-cp35m-win32.whl#sha256=ec0ccea315c1939aa216186bb3e463de1bf95f5d04266346f9f6ef48223f1d22 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,959 Skipping link: none of the wheel's tags (cp35-cp35m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/60/98/edb1b5dc148261718ed87b0519a9dd3ce55abb6b9dc263b17d70b940fea6/hdbscan-0.8.15-cp35-cp35m-win_amd64.whl#sha256=96a66692632f469a0fabb748ecc393116f272d0f7e333e3ab619532fdf0080f4 (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,959 Skipping link: none of the wheel's tags (cp36-cp36m-win32) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/88/17/87b5445d459296d2cf2ac0ee57f886f98388672d64e4f22fd0b5948c1a9e/hdbscan-0.8.15-cp36-cp36m-win32.whl#sha256=5ef6faeec3a8d0751f50d9a14dc1e7e9748829bc49219671c914eff611e259db (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,960 Skipping link: none of the wheel's tags (cp36-cp36m-win_amd64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/d2/3d/d69885782cdacb2f192799693d5ae76f3d49db34cd7066d6ecd44763de51/hdbscan-0.8.15-cp36-cp36m-win_amd64.whl#sha256=a63edd3f143fce7f854e0a6c4e93e54e004798a0195a212d14138311a03606dd (from https://pypi.org/simple/hdbscan/) 2021-07-10T09:38:26,960 Found link https://files.pythonhosted.org/packages/ce/7a/7d24b0aacdc05f0c0c04d6bbda05dc006ff15fc64bb63282fbfc05da9965/hdbscan-0.8.15.tar.gz#sha256=446f98e1ea622a39c1f396d839fa2b1c35db98234e373336de61c3bd6ffaec78 (from https://pypi.org/simple/hdbscan/), version: 0.8.15 2021-07-10T09:38:26,960 Found link https://files.pythonhosted.org/packages/bb/49/df8f8092844d06bd4e1e98e13f960f479f6e3c7d21ca583511a3cbfbeab2/hdbscan-0.8.16.tar.gz#sha256=025cb58039d5a6ca73fee93243c5c034f9366c08c035f7c73b810068dfe31599 (from https://pypi.org/simple/hdbscan/), version: 0.8.16 2021-07-10T09:38:26,961 Found link https://files.pythonhosted.org/packages/c6/98/911ad64e293e8be804d471956c5692280072a97384a13a365989bbf8b7af/hdbscan-0.8.17.tar.gz#sha256=7ed08fc0573dd50b008a4d3f833a824888b81aec5c558eec131d36c822a5c41a (from https://pypi.org/simple/hdbscan/), version: 0.8.17 2021-07-10T09:38:26,961 Found link https://files.pythonhosted.org/packages/aa/30/97f3fc4f1f1fdb8f2c77aef720758ea3e8251c43bb092cb0d64bde76fb78/hdbscan-0.8.18.tar.gz#sha256=4d6782f08872f4c54983873a41759daae680d6247b0db363f3510cb001108f02 (from https://pypi.org/simple/hdbscan/), version: 0.8.18 2021-07-10T09:38:26,961 Found link https://files.pythonhosted.org/packages/22/8d/1fc4bfd17ae871441fd6440abc3da5fdecf34831aa711e3e52727ab00556/hdbscan-0.8.19.tar.gz#sha256=7bd74c7bd16540d7f437cf6cb61ceb4d23506f4d040c436d7570d104c1297e31 (from https://pypi.org/simple/hdbscan/), version: 0.8.19 2021-07-10T09:38:26,962 Found link https://files.pythonhosted.org/packages/c8/c5/99f2a386b2dd716b82d377a1a605d03d8734a14686f8d192c76785f481fd/hdbscan-0.8.20.tar.gz#sha256=263e9f34db63eec217d50f2ca3e65049c065775dc4095b5ee817824cd2b5b51b (from https://pypi.org/simple/hdbscan/), version: 0.8.20 2021-07-10T09:38:26,962 Found link https://files.pythonhosted.org/packages/b2/cd/6ae33e3cc932c05273778dc1d8d61f3934c66fc330518241f06eb3d4c489/hdbscan-0.8.21.tar.gz#sha256=1bf3132763d4d3dc5678f037003b6df657a242437743060787566d6fcaec52b5 (from https://pypi.org/simple/hdbscan/), version: 0.8.21 2021-07-10T09:38:26,962 Found link https://files.pythonhosted.org/packages/10/7c/1401ec61b0e7392287e045b6913206cfff050b65d869c19f7ec0f5626487/hdbscan-0.8.22.tar.gz#sha256=5cfdc25375123eb9a72363449979141cc928c1953f220f0f81d7baabcaccec2d (from https://pypi.org/simple/hdbscan/), version: 0.8.22 2021-07-10T09:38:26,962 Found link https://files.pythonhosted.org/packages/18/35/a117860dd7f38eb1a77e4e30ac69a63c45c5a6356f503874fbe80fc464b7/hdbscan-0.8.23.tar.gz#sha256=ff60c66591452ceb6bdb7592c560a1ebc7e128a02dd3880e048861f7fea7f78d (from https://pypi.org/simple/hdbscan/), version: 0.8.23 2021-07-10T09:38:26,963 Found link https://files.pythonhosted.org/packages/9f/db/c3e6b58518d0a19861eb0309670b8432a2237acae253db92ba9b523f9082/hdbscan-0.8.24.tar.gz#sha256=fe31a7ea0ce2c9babd190a195e491834ff9f64c74daa4ca94fa65a88f701269a (from https://pypi.org/simple/hdbscan/), version: 0.8.24 2021-07-10T09:38:26,963 Found link https://files.pythonhosted.org/packages/8a/a6/2524f6cff01a2da18f07f6a2b04977297f8a094ef3a92aa6bfc6c3924687/hdbscan-0.8.25.tar.gz#sha256=92cccf0cfcb544007529841a387e97379cfe5d2d33ab620777cf2b17a925b19e (from https://pypi.org/simple/hdbscan/), version: 0.8.25 2021-07-10T09:38:26,963 Found link https://files.pythonhosted.org/packages/22/2f/2423d844072f007a74214c1adc46260e45f034bb1679ccadfbb8a601f647/hdbscan-0.8.26.tar.gz#sha256=81a61cd011e010b20e7cbd8d235053a98892504d32881d379d1902278817927e (from https://pypi.org/simple/hdbscan/), version: 0.8.26 2021-07-10T09:38:26,963 Found link https://files.pythonhosted.org/packages/32/bb/59a75bc5ac66a9b4f9b8f979e4545af0e98bb1ca4e6ae96b3b956b554223/hdbscan-0.8.27.tar.gz#sha256=e3a418d0d36874f7b6a1bf0b7461f3857fc13a525fd48ba34caed2fe8973aa26 (from https://pypi.org/simple/hdbscan/), version: 0.8.27 2021-07-10T09:38:26,964 Skipping link: not a file: https://pypi.org/simple/hdbscan/ 2021-07-10T09:38:26,971 Given no hashes to check 1 links for project 'hdbscan': discarding no candidates 2021-07-10T09:38:26,990 Collecting hdbscan==0.4 2021-07-10T09:38:26,991 Created temporary directory: /tmp/pip-unpack-yb9e3exk 2021-07-10T09:38:27,161 Downloading hdbscan-0.4.tar.gz (32 kB) 2021-07-10T09:38:27,229 Added hdbscan==0.4 from https://files.pythonhosted.org/packages/14/97/4beb7d568d31a7a77988e30392e75a683b0079c67134c6160a31fbff67df/hdbscan-0.4.tar.gz#sha256=f06c5adc99430faef92db1f1a714d60b2472bc3dc52fbe3aa11a8c5400abee3c to build tracker '/tmp/pip-req-tracker-d63w394r' 2021-07-10T09:38:27,230 Running setup.py (path:/tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/setup.py) egg_info for package hdbscan 2021-07-10T09:38:27,231 Created temporary directory: /tmp/pip-pip-egg-info-otgb2ai4 2021-07-10T09:38:27,231 Running command python setup.py egg_info 2021-07-10T09:38:28,682 running egg_info 2021-07-10T09:38:28,684 creating /tmp/pip-pip-egg-info-otgb2ai4/hdbscan.egg-info 2021-07-10T09:38:28,685 writing /tmp/pip-pip-egg-info-otgb2ai4/hdbscan.egg-info/PKG-INFO 2021-07-10T09:38:28,688 writing dependency_links to /tmp/pip-pip-egg-info-otgb2ai4/hdbscan.egg-info/dependency_links.txt 2021-07-10T09:38:28,689 writing requirements to /tmp/pip-pip-egg-info-otgb2ai4/hdbscan.egg-info/requires.txt 2021-07-10T09:38:28,690 writing top-level names to /tmp/pip-pip-egg-info-otgb2ai4/hdbscan.egg-info/top_level.txt 2021-07-10T09:38:28,692 writing manifest file '/tmp/pip-pip-egg-info-otgb2ai4/hdbscan.egg-info/SOURCES.txt' 2021-07-10T09:38:28,935 reading manifest file '/tmp/pip-pip-egg-info-otgb2ai4/hdbscan.egg-info/SOURCES.txt' 2021-07-10T09:38:28,941 writing manifest file '/tmp/pip-pip-egg-info-otgb2ai4/hdbscan.egg-info/SOURCES.txt' 2021-07-10T09:38:29,059 Source in /tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9 has version 0.4, which satisfies requirement hdbscan==0.4 from https://files.pythonhosted.org/packages/14/97/4beb7d568d31a7a77988e30392e75a683b0079c67134c6160a31fbff67df/hdbscan-0.4.tar.gz#sha256=f06c5adc99430faef92db1f1a714d60b2472bc3dc52fbe3aa11a8c5400abee3c 2021-07-10T09:38:29,060 Removed hdbscan==0.4 from https://files.pythonhosted.org/packages/14/97/4beb7d568d31a7a77988e30392e75a683b0079c67134c6160a31fbff67df/hdbscan-0.4.tar.gz#sha256=f06c5adc99430faef92db1f1a714d60b2472bc3dc52fbe3aa11a8c5400abee3c from build tracker '/tmp/pip-req-tracker-d63w394r' 2021-07-10T09:38:29,065 Created temporary directory: /tmp/pip-unpack-adrb8vrb 2021-07-10T09:38:29,065 Building wheels for collected packages: hdbscan 2021-07-10T09:38:29,069 Created temporary directory: /tmp/pip-wheel-hezozbma 2021-07-10T09:38:29,070 Building wheel for hdbscan (setup.py): started 2021-07-10T09:38:29,070 Destination directory: /tmp/pip-wheel-hezozbma 2021-07-10T09:38:29,070 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hezozbma 2021-07-10T09:38:30,556 running bdist_wheel 2021-07-10T09:38:30,560 running build 2021-07-10T09:38:30,561 running build_py 2021-07-10T09:38:30,783 creating build 2021-07-10T09:38:30,784 creating build/lib.linux-armv7l-3.9 2021-07-10T09:38:30,785 creating build/lib.linux-armv7l-3.9/hdbscan 2021-07-10T09:38:30,787 copying hdbscan/__init__.py -> build/lib.linux-armv7l-3.9/hdbscan 2021-07-10T09:38:30,790 copying hdbscan/robust_single_linkage_.py -> build/lib.linux-armv7l-3.9/hdbscan 2021-07-10T09:38:30,794 copying hdbscan/hdbscan_.py -> build/lib.linux-armv7l-3.9/hdbscan 2021-07-10T09:38:30,797 copying hdbscan/plots.py -> build/lib.linux-armv7l-3.9/hdbscan 2021-07-10T09:38:30,802 running build_ext 2021-07-10T09:38:30,880 cythoning hdbscan/_hdbscan_tree.pyx to hdbscan/_hdbscan_tree.c 2021-07-10T09:38:31,533 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/hdbscan/_hdbscan_tree.pyx 2021-07-10T09:38:31,533 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T09:38:33,548 cythoning hdbscan/_hdbscan_linkage.pyx to hdbscan/_hdbscan_linkage.c 2021-07-10T09:38:33,554 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/hdbscan/_hdbscan_linkage.pyx 2021-07-10T09:38:33,554 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T09:38:36,262 Error compiling Cython file: 2021-07-10T09:38:36,262 ------------------------------------------------------------ 2021-07-10T09:38:36,262 ... 2021-07-10T09:38:36,263 from libc.float cimport DBL_MAX 2021-07-10T09:38:36,263 from scipy.spatial.distance import cdist, pdist 2021-07-10T09:38:36,263 from dist_metrics import DistanceMetric 2021-07-10T09:38:36,263 from dist_metrics cimport DistanceMetric 2021-07-10T09:38:36,263 ^ 2021-07-10T09:38:36,263 ------------------------------------------------------------ 2021-07-10T09:38:36,264 hdbscan/_hdbscan_linkage.pyx:15:0: 'dist_metrics.pxd' not found 2021-07-10T09:38:36,267 Error compiling Cython file: 2021-07-10T09:38:36,267 ------------------------------------------------------------ 2021-07-10T09:38:36,267 ... 2021-07-10T09:38:36,267 from libc.float cimport DBL_MAX 2021-07-10T09:38:36,267 from scipy.spatial.distance import cdist, pdist 2021-07-10T09:38:36,268 from dist_metrics import DistanceMetric 2021-07-10T09:38:36,268 from dist_metrics cimport DistanceMetric 2021-07-10T09:38:36,268 ^ 2021-07-10T09:38:36,268 ------------------------------------------------------------ 2021-07-10T09:38:36,268 hdbscan/_hdbscan_linkage.pyx:15:0: 'dist_metrics/DistanceMetric.pxd' not found 2021-07-10T09:38:36,271 Error compiling Cython file: 2021-07-10T09:38:36,271 ------------------------------------------------------------ 2021-07-10T09:38:36,271 ... 2021-07-10T09:38:36,271 cpdef np.ndarray[np.double_t, ndim=2] mst_linkage_core_cdist( 2021-07-10T09:38:36,272 np.ndarray[np.double_t, ndim=2] raw_data, 2021-07-10T09:38:36,272 np.ndarray[np.double_t, ndim=1] core_distances, 2021-07-10T09:38:36,272 DistanceMetric dist_metric): 2021-07-10T09:38:36,272 ^ 2021-07-10T09:38:36,272 ------------------------------------------------------------ 2021-07-10T09:38:36,272 hdbscan/_hdbscan_linkage.pyx:135:31: 'DistanceMetric' is not a type identifier 2021-07-10T09:38:38,897 Error compiling Cython file: 2021-07-10T09:38:38,898 ------------------------------------------------------------ 2021-07-10T09:38:38,898 ... 2021-07-10T09:38:38,898 if in_tree[j]: 2021-07-10T09:38:38,898 continue 2021-07-10T09:38:38,898 right_value = current_distances[j] 2021-07-10T09:38:38,898 # left_value = left[j] 2021-07-10T09:38:38,898 left_value = dist_metric.dist(&raw_data_ptr[num_features * current_node], 2021-07-10T09:38:38,898 ^ 2021-07-10T09:38:38,899 ------------------------------------------------------------ 2021-07-10T09:38:38,899 hdbscan/_hdbscan_linkage.pyx:201:42: Cannot convert 'double_t *' to Python object 2021-07-10T09:38:38,899 Error compiling Cython file: 2021-07-10T09:38:38,899 ------------------------------------------------------------ 2021-07-10T09:38:38,899 ... 2021-07-10T09:38:38,899 continue 2021-07-10T09:38:38,900 right_value = current_distances[j] 2021-07-10T09:38:38,900 # left_value = left[j] 2021-07-10T09:38:38,900 left_value = dist_metric.dist(&raw_data_ptr[num_features * current_node], 2021-07-10T09:38:38,900 &raw_data_ptr[num_features * j], 2021-07-10T09:38:38,900 ^ 2021-07-10T09:38:38,900 ------------------------------------------------------------ 2021-07-10T09:38:38,901 hdbscan/_hdbscan_linkage.pyx:202:42: Cannot convert 'double_t *' to Python object 2021-07-10T09:38:41,347 cythoning hdbscan/_hdbscan_boruvka.pyx to hdbscan/_hdbscan_boruvka.c 2021-07-10T09:38:41,354 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/hdbscan/_hdbscan_boruvka.pyx 2021-07-10T09:38:41,354 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T09:38:43,374 Error compiling Cython file: 2021-07-10T09:38:43,374 ------------------------------------------------------------ 2021-07-10T09:38:43,375 ... 2021-07-10T09:38:43,375 from libc.math cimport fabs, sqrt, exp, cos, pow 2021-07-10T09:38:43,375 # from scipy.spatial.distance import cdist, pdist, squareform 2021-07-10T09:38:43,375 import dist_metrics as dist_metrics 2021-07-10T09:38:43,375 cimport dist_metrics as dist_metrics 2021-07-10T09:38:43,375 ^ 2021-07-10T09:38:43,375 ------------------------------------------------------------ 2021-07-10T09:38:43,376 hdbscan/_hdbscan_boruvka.pyx:17:8: 'dist_metrics.pxd' not found 2021-07-10T09:38:45,682 Error compiling Cython file: 2021-07-10T09:38:45,682 ------------------------------------------------------------ 2021-07-10T09:38:45,682 ... 2021-07-10T09:38:45,682 np.int64_t node2, 2021-07-10T09:38:45,683 np.double_t[:, ::1] centroid_dist): 2021-07-10T09:38:45,683 cdef np.double_t dist_pt = centroid_dist[node1, node2] 2021-07-10T09:38:45,683 return max(0, (dist_pt - radius1 - radius2)) 2021-07-10T09:38:45,683 cdef inline np.double_t kdtree_min_dist_dual(dist_metrics.DistanceMetric metric, 2021-07-10T09:38:45,683 ^ 2021-07-10T09:38:45,683 ------------------------------------------------------------ 2021-07-10T09:38:45,683 hdbscan/_hdbscan_boruvka.pyx:48:45: 'DistanceMetric' is not a type identifier 2021-07-10T09:38:45,688 Error compiling Cython file: 2021-07-10T09:38:45,688 ------------------------------------------------------------ 2021-07-10T09:38:45,688 ... 2021-07-10T09:38:45,688 return self.is_component.nonzero()[0] 2021-07-10T09:38:45,689 cdef class KDTreeBoruvkaAlgorithm (object): 2021-07-10T09:38:45,689 cdef object tree 2021-07-10T09:38:45,689 cdef dist_metrics.DistanceMetric dist 2021-07-10T09:38:45,689 ^ 2021-07-10T09:38:45,689 ------------------------------------------------------------ 2021-07-10T09:38:45,689 hdbscan/_hdbscan_boruvka.pyx:119:9: 'DistanceMetric' is not a type identifier 2021-07-10T09:38:45,698 Error compiling Cython file: 2021-07-10T09:38:45,698 ------------------------------------------------------------ 2021-07-10T09:38:45,699 ... 2021-07-10T09:38:45,699 return self.edges 2021-07-10T09:38:45,699 cdef class BallTreeBoruvkaAlgorithm (object): 2021-07-10T09:38:45,699 cdef object tree 2021-07-10T09:38:45,699 cdef dist_metrics.DistanceMetric dist 2021-07-10T09:38:45,699 ^ 2021-07-10T09:38:45,699 ------------------------------------------------------------ 2021-07-10T09:38:45,700 hdbscan/_hdbscan_boruvka.pyx:494:9: 'DistanceMetric' is not a type identifier 2021-07-10T09:38:46,409 Error compiling Cython file: 2021-07-10T09:38:46,409 ------------------------------------------------------------ 2021-07-10T09:38:46,410 ... 2021-07-10T09:38:46,410 if self.core_distance_ptr[q] > self.candidate_distance_ptr[component1]: 2021-07-10T09:38:46,410 continue 2021-07-10T09:38:46,410 if component1 != component2: 2021-07-10T09:38:46,410 d = self.dist.dist(&raw_data[self.num_features * p], 2021-07-10T09:38:46,410 ^ 2021-07-10T09:38:46,411 ------------------------------------------------------------ 2021-07-10T09:38:46,411 hdbscan/_hdbscan_boruvka.pyx:387:43: Cannot convert 'double_t *' to Python object 2021-07-10T09:38:46,411 Error compiling Cython file: 2021-07-10T09:38:46,411 ------------------------------------------------------------ 2021-07-10T09:38:46,411 ... 2021-07-10T09:38:46,411 continue 2021-07-10T09:38:46,412 if component1 != component2: 2021-07-10T09:38:46,412 d = self.dist.dist(&raw_data[self.num_features * p], 2021-07-10T09:38:46,412 &raw_data[self.num_features * q], 2021-07-10T09:38:46,412 ^ 2021-07-10T09:38:46,412 ------------------------------------------------------------ 2021-07-10T09:38:46,412 hdbscan/_hdbscan_boruvka.pyx:388:43: Cannot convert 'double_t *' to Python object 2021-07-10T09:38:46,505 Error compiling Cython file: 2021-07-10T09:38:46,505 ------------------------------------------------------------ 2021-07-10T09:38:46,505 ... 2021-07-10T09:38:46,505 if self.core_distance_ptr[q] > self.candidate_distance_ptr[component1]: 2021-07-10T09:38:46,505 continue 2021-07-10T09:38:46,506 if component1 != component2: 2021-07-10T09:38:46,506 d = self.dist.dist(&raw_data[self.num_features * p], 2021-07-10T09:38:46,506 ^ 2021-07-10T09:38:46,506 ------------------------------------------------------------ 2021-07-10T09:38:46,506 hdbscan/_hdbscan_boruvka.pyx:758:43: Cannot convert 'double_t *' to Python object 2021-07-10T09:38:46,507 Error compiling Cython file: 2021-07-10T09:38:46,507 ------------------------------------------------------------ 2021-07-10T09:38:46,507 ... 2021-07-10T09:38:46,507 continue 2021-07-10T09:38:46,507 if component1 != component2: 2021-07-10T09:38:46,507 d = self.dist.dist(&raw_data[self.num_features * p], 2021-07-10T09:38:46,507 &raw_data[self.num_features * q], 2021-07-10T09:38:46,508 ^ 2021-07-10T09:38:46,508 ------------------------------------------------------------ 2021-07-10T09:38:46,508 hdbscan/_hdbscan_boruvka.pyx:759:43: Cannot convert 'double_t *' to Python object 2021-07-10T09:38:49,239 cythoning hdbscan/_hdbscan_reachability.pyx to hdbscan/_hdbscan_reachability.c 2021-07-10T09:38:49,246 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/hdbscan/_hdbscan_reachability.pyx 2021-07-10T09:38:49,246 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T09:38:51,076 cythoning hdbscan/dist_metrics.pyx to hdbscan/dist_metrics.c 2021-07-10T09:38:51,081 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/hdbscan/dist_metrics.pyx 2021-07-10T09:38:51,082 tree = Parsing.p_module(s, pxd, full_module_name) 2021-07-10T09:38:52,853 Error compiling Cython file: 2021-07-10T09:38:52,853 ------------------------------------------------------------ 2021-07-10T09:38:52,853 ... 2021-07-10T09:38:52,854 ITYPE = np.int64 2021-07-10T09:38:52,854 ###################################################################### 2021-07-10T09:38:52,854 # Numpy 1.3-1.4 compatibility utilities 2021-07-10T09:38:52,854 cdef DTYPE_t[:, ::1] get_memview_DTYPE_2D( 2021-07-10T09:38:52,854 ^ 2021-07-10T09:38:52,854 ------------------------------------------------------------ 2021-07-10T09:38:52,855 hdbscan/dist_metrics.pyx:23:5: 'DTYPE_t' is not a type identifier 2021-07-10T09:38:52,855 Error compiling Cython file: 2021-07-10T09:38:52,855 ------------------------------------------------------------ 2021-07-10T09:38:52,855 ... 2021-07-10T09:38:52,856 ###################################################################### 2021-07-10T09:38:52,856 # Numpy 1.3-1.4 compatibility utilities 2021-07-10T09:38:52,856 cdef DTYPE_t[:, ::1] get_memview_DTYPE_2D( 2021-07-10T09:38:52,856 np.ndarray[DTYPE_t, ndim=2, mode='c'] X): 2021-07-10T09:38:52,856 ^ 2021-07-10T09:38:52,856 ------------------------------------------------------------ 2021-07-10T09:38:52,857 hdbscan/dist_metrics.pyx:24:49: Invalid type. 2021-07-10T09:38:52,857 building 'hdbscan._hdbscan_tree' extension 2021-07-10T09:38:52,857 creating build/temp.linux-armv7l-3.9 2021-07-10T09:38:52,857 creating build/temp.linux-armv7l-3.9/hdbscan 2021-07-10T09:38:52,857 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c hdbscan/_hdbscan_tree.c -o build/temp.linux-armv7l-3.9/hdbscan/_hdbscan_tree.o 2021-07-10T09:38:53,277 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-10T09:38:53,277 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-10T09:38:53,277 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-10T09:38:53,278 from hdbscan/_hdbscan_tree.c:612: 2021-07-10T09:38:53,278 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-10T09:38:53,278 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-10T09:38:53,278 | ^~~~~~~ 2021-07-10T09:39:04,114 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/hdbscan/_hdbscan_tree.o -o build/lib.linux-armv7l-3.9/hdbscan/_hdbscan_tree.cpython-39-arm-linux-gnueabihf.so 2021-07-10T09:39:04,270 building 'hdbscan._hdbscan_linkage' extension 2021-07-10T09:39:04,271 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c hdbscan/_hdbscan_linkage.c -o build/temp.linux-armv7l-3.9/hdbscan/_hdbscan_linkage.o 2021-07-10T09:39:04,332 hdbscan/_hdbscan_linkage.c:1:2: error: #error Do not use this file, it is the result of a failed Cython compilation. 2021-07-10T09:39:04,333 1 | #error Do not use this file, it is the result of a failed Cython compilation. 2021-07-10T09:39:04,333 | ^~~~~ 2021-07-10T09:39:04,336 error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1 2021-07-10T09:39:04,799 Building wheel for hdbscan (setup.py): finished with status 'error' 2021-07-10T09:39:04,799 ERROR: Failed building wheel for hdbscan 2021-07-10T09:39:04,800 Running setup.py clean for hdbscan 2021-07-10T09:39:04,800 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-x4_n5mer/hdbscan_0ac7c7d57220446680bf856ffb5b27f9/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all 2021-07-10T09:39:06,037 running clean 2021-07-10T09:39:06,040 removing 'build/temp.linux-armv7l-3.9' (and everything under it) 2021-07-10T09:39:06,043 removing 'build/lib.linux-armv7l-3.9' (and everything under it) 2021-07-10T09:39:06,047 'build/bdist.linux-armv7l' does not exist -- can't clean it 2021-07-10T09:39:06,047 'build/scripts-3.9' does not exist -- can't clean it 2021-07-10T09:39:06,047 removing 'build' 2021-07-10T09:39:06,137 Failed to build hdbscan 2021-07-10T09:39:06,137 ERROR: Failed to build one or more wheels 2021-07-10T09:39:06,138 Exception information: 2021-07-10T09:39:06,138 Traceback (most recent call last): 2021-07-10T09:39:06,138 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 180, in _main 2021-07-10T09:39:06,138 status = self.run(options, args) 2021-07-10T09:39:06,138 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2021-07-10T09:39:06,138 return func(self, options, args) 2021-07-10T09:39:06,138 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 174, in run 2021-07-10T09:39:06,138 raise CommandError( 2021-07-10T09:39:06,138 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2021-07-10T09:39:06,141 Removed build tracker: '/tmp/pip-req-tracker-d63w394r'