2021-07-15T16:50:07,593 Created temporary directory: /tmp/pip-ephem-wheel-cache-8w9gp8wm 2021-07-15T16:50:07,596 Created temporary directory: /tmp/pip-req-tracker-qhitxs41 2021-07-15T16:50:07,596 Initialized build tracking at /tmp/pip-req-tracker-qhitxs41 2021-07-15T16:50:07,597 Created build tracker: /tmp/pip-req-tracker-qhitxs41 2021-07-15T16:50:07,597 Entered build tracker: /tmp/pip-req-tracker-qhitxs41 2021-07-15T16:50:07,597 Created temporary directory: /tmp/pip-wheel-7bkijhza 2021-07-15T16:50:07,626 1 location(s) to search for versions of westpa: 2021-07-15T16:50:07,626 * https://pypi.org/simple/westpa/ 2021-07-15T16:50:07,627 Fetching project page and analyzing links: https://pypi.org/simple/westpa/ 2021-07-15T16:50:07,627 Getting page https://pypi.org/simple/westpa/ 2021-07-15T16:50:07,629 Found index url https://pypi.org/simple 2021-07-15T16:50:07,716 Found link https://files.pythonhosted.org/packages/a8/57/c4b43d48677bb48b620e3f0cda3c71aa997ab3a039ba4ba0cb05d807df19/westpa-0.0.2.tar.gz#sha256=0e8c0ce2ffe19a92d66528962c6a9e1175208010ad65885e77deee9fcf429d0e (from https://pypi.org/simple/westpa/), version: 0.0.2 2021-07-15T16:50:07,717 Found link https://files.pythonhosted.org/packages/b0/49/26240704f4fcc44e3187b617d080c7b96a1f8b4004a79b19b189bf738a49/westpa-0.0.3.tar.gz#sha256=227f5f9dce782401892d9c38f7336a5ba6b864e964b9a9ec3201bb31935cc083 (from https://pypi.org/simple/westpa/), version: 0.0.3 2021-07-15T16:50:07,717 Skipping link: not a file: https://pypi.org/simple/westpa/ 2021-07-15T16:50:07,737 Given no hashes to check 1 links for project 'westpa': discarding no candidates 2021-07-15T16:50:07,757 Collecting westpa==0.0.2 2021-07-15T16:50:07,758 Created temporary directory: /tmp/pip-unpack-zrojb88m 2021-07-15T16:50:08,361 Downloading westpa-0.0.2.tar.gz (988 kB) 2021-07-15T16:50:09,077 Added westpa==0.0.2 from https://files.pythonhosted.org/packages/a8/57/c4b43d48677bb48b620e3f0cda3c71aa997ab3a039ba4ba0cb05d807df19/westpa-0.0.2.tar.gz#sha256=0e8c0ce2ffe19a92d66528962c6a9e1175208010ad65885e77deee9fcf429d0e to build tracker '/tmp/pip-req-tracker-qhitxs41' 2021-07-15T16:50:09,078 Running setup.py (path:/tmp/pip-wheel-7bkijhza/westpa_de8819f674464283b1ff84f06c23a4d6/setup.py) egg_info for package westpa 2021-07-15T16:50:09,079 Created temporary directory: /tmp/pip-pip-egg-info-vcsax8ae 2021-07-15T16:50:09,079 Running command python setup.py egg_info 2021-07-15T16:50:10,758 Regenerating C extension code using Cython: True 2021-07-15T16:50:10,759 running egg_info 2021-07-15T16:50:10,761 creating /tmp/pip-pip-egg-info-vcsax8ae/westpa.egg-info 2021-07-15T16:50:10,762 writing /tmp/pip-pip-egg-info-vcsax8ae/westpa.egg-info/PKG-INFO 2021-07-15T16:50:10,764 writing dependency_links to /tmp/pip-pip-egg-info-vcsax8ae/westpa.egg-info/dependency_links.txt 2021-07-15T16:50:10,766 writing requirements to /tmp/pip-pip-egg-info-vcsax8ae/westpa.egg-info/requires.txt 2021-07-15T16:50:10,767 writing top-level names to /tmp/pip-pip-egg-info-vcsax8ae/westpa.egg-info/top_level.txt 2021-07-15T16:50:10,769 writing manifest file '/tmp/pip-pip-egg-info-vcsax8ae/westpa.egg-info/SOURCES.txt' 2021-07-15T16:50:10,947 reading manifest file '/tmp/pip-pip-egg-info-vcsax8ae/westpa.egg-info/SOURCES.txt' 2021-07-15T16:50:10,949 reading manifest template 'MANIFEST.in' 2021-07-15T16:50:11,145 writing manifest file '/tmp/pip-pip-egg-info-vcsax8ae/westpa.egg-info/SOURCES.txt' 2021-07-15T16:50:11,258 Source in /tmp/pip-wheel-7bkijhza/westpa_de8819f674464283b1ff84f06c23a4d6 has version 0.0.2, which satisfies requirement westpa==0.0.2 from https://files.pythonhosted.org/packages/a8/57/c4b43d48677bb48b620e3f0cda3c71aa997ab3a039ba4ba0cb05d807df19/westpa-0.0.2.tar.gz#sha256=0e8c0ce2ffe19a92d66528962c6a9e1175208010ad65885e77deee9fcf429d0e 2021-07-15T16:50:11,259 Removed westpa==0.0.2 from https://files.pythonhosted.org/packages/a8/57/c4b43d48677bb48b620e3f0cda3c71aa997ab3a039ba4ba0cb05d807df19/westpa-0.0.2.tar.gz#sha256=0e8c0ce2ffe19a92d66528962c6a9e1175208010ad65885e77deee9fcf429d0e from build tracker '/tmp/pip-req-tracker-qhitxs41' 2021-07-15T16:50:11,262 Created temporary directory: /tmp/pip-unpack-ncikxovi 2021-07-15T16:50:11,263 Building wheels for collected packages: westpa 2021-07-15T16:50:11,267 Created temporary directory: /tmp/pip-wheel-rlr9c9as 2021-07-15T16:50:11,267 Building wheel for westpa (setup.py): started 2021-07-15T16:50:11,268 Destination directory: /tmp/pip-wheel-rlr9c9as 2021-07-15T16:50:11,268 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-7bkijhza/westpa_de8819f674464283b1ff84f06c23a4d6/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-7bkijhza/westpa_de8819f674464283b1ff84f06c23a4d6/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-rlr9c9as 2021-07-15T16:50:12,698 Regenerating C extension code using Cython: True 2021-07-15T16:50:12,911 running bdist_wheel 2021-07-15T16:50:12,917 running build 2021-07-15T16:50:12,917 running build_py 2021-07-15T16:50:13,052 creating build 2021-07-15T16:50:13,053 creating build/lib.linux-armv7l-3.9 2021-07-15T16:50:13,053 creating build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,054 copying westpa/sim_manager.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,057 copying westpa/data_manager.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,061 copying westpa/segment.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,064 copying westpa/yamlcfg.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,067 copying westpa/textio.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,069 copying westpa/we_driver.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,072 copying westpa/_rc.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,074 copying westpa/__init__.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,076 copying westpa/systems.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,080 copying westpa/progress.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,082 copying westpa/states.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,085 copying westpa/extloader.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,087 copying westpa/h5io.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,091 copying westpa/wm_ops.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,094 running build_ext 2021-07-15T16:50:13,184 skipping 'westpa/fasthist/_fasthist.c' Cython extension (up-to-date) 2021-07-15T16:50:13,184 skipping 'westpa/mclib/_mclib.c' Cython extension (up-to-date) 2021-07-15T16:50:13,185 skipping 'westpa/binning/_assign.c' Cython extension (up-to-date) 2021-07-15T16:50:13,185 skipping 'westpa/kinetics/_kinetics.c' Cython extension (up-to-date) 2021-07-15T16:50:13,185 skipping 'westpa/reweight/_reweight.c' Cython extension (up-to-date) 2021-07-15T16:50:13,186 building 'westpa.fasthist._fasthist' extension 2021-07-15T16:50:13,186 creating build/temp.linux-armv7l-3.9 2021-07-15T16:50:13,186 creating build/temp.linux-armv7l-3.9/westpa 2021-07-15T16:50:13,187 creating build/temp.linux-armv7l-3.9/westpa/fasthist 2021-07-15T16:50:13,188 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/fasthist/_fasthist.c -o build/temp.linux-armv7l-3.9/westpa/fasthist/_fasthist.o -O3 2021-07-15T16:50:13,602 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:50:13,602 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:50:13,602 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:50:13,602 from westpa/fasthist/_fasthist.c:598: 2021-07-15T16:50:13,602 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:50:13,603 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:50:13,603 | ^~~~~~~ 2021-07-15T16:50:14,446 westpa/fasthist/_fasthist.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:50:14,466 westpa/fasthist/_fasthist.c:29316:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,466 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,466 | ^ 2021-07-15T16:50:14,466 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,467 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,467 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,467 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:14,467 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:14,467 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,490 westpa/fasthist/_fasthist.c:29316:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,490 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,490 | ^ 2021-07-15T16:50:14,491 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,491 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,491 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,491 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:14,491 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:14,491 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,514 westpa/fasthist/_fasthist.c:29316:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,514 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,514 | ^ 2021-07-15T16:50:14,514 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,514 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,514 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,515 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:14,515 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:14,515 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,537 westpa/fasthist/_fasthist.c:29316:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,538 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,538 | ^ 2021-07-15T16:50:14,538 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,538 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,538 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,538 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:14,538 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:14,539 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,561 westpa/fasthist/_fasthist.c:29316:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,561 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,561 | ^ 2021-07-15T16:50:14,562 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,562 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,562 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,562 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:14,562 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:14,562 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,585 westpa/fasthist/_fasthist.c:29316:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,585 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,585 | ^ 2021-07-15T16:50:14,585 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,585 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,586 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,586 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:14,586 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:14,586 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,613 westpa/fasthist/_fasthist.c:29332:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,613 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,613 | ^ 2021-07-15T16:50:14,613 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,613 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,613 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,614 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:14,614 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:14,614 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,637 westpa/fasthist/_fasthist.c:29332:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,637 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,637 | ^ 2021-07-15T16:50:14,637 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,637 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,637 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,637 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:14,638 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:14,638 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,660 westpa/fasthist/_fasthist.c:29332:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,661 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,661 | ^ 2021-07-15T16:50:14,661 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,661 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,661 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,661 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:14,661 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:14,661 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,684 westpa/fasthist/_fasthist.c:29332:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,684 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,684 | ^ 2021-07-15T16:50:14,685 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,685 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,685 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,685 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:14,685 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:14,685 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,708 westpa/fasthist/_fasthist.c:29332:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,708 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,708 | ^ 2021-07-15T16:50:14,708 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,708 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,708 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,709 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:14,709 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:14,709 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,731 westpa/fasthist/_fasthist.c:29332:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,732 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:14,732 | ^ 2021-07-15T16:50:14,732 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,732 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,732 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,732 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:14,732 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:14,732 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:14,860 westpa/fasthist/_fasthist.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:50:14,881 westpa/fasthist/_fasthist.c:29845:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:14,881 29845 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:50:14,881 | ^~~~~~ 2021-07-15T16:50:14,881 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:14,881 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:14,881 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:14,882 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:50:14,882 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:50:14,882 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:43,453 creating build/lib.linux-armv7l-3.9/westpa/fasthist 2021-07-15T16:50:43,453 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/fasthist/_fasthist.o -o build/lib.linux-armv7l-3.9/westpa/fasthist/_fasthist.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:50:43,650 building 'westpa.mclib._mclib' extension 2021-07-15T16:50:43,650 creating build/temp.linux-armv7l-3.9/westpa/mclib 2021-07-15T16:50:43,651 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/mclib/_mclib.c -o build/temp.linux-armv7l-3.9/westpa/mclib/_mclib.o -O3 2021-07-15T16:50:44,050 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:50:44,050 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:50:44,050 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:50:44,051 from westpa/mclib/_mclib.c:598: 2021-07-15T16:50:44,051 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:50:44,051 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:50:44,051 | ^~~~~~~ 2021-07-15T16:50:44,591 westpa/mclib/_mclib.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:50:44,603 westpa/mclib/_mclib.c:23675:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,603 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,603 | ^ 2021-07-15T16:50:44,603 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,603 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,603 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,604 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:44,604 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:44,604 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,617 westpa/mclib/_mclib.c:23675:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,617 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,618 | ^ 2021-07-15T16:50:44,618 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,618 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,618 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,618 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:44,618 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:44,618 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,631 westpa/mclib/_mclib.c:23675:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,631 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,632 | ^ 2021-07-15T16:50:44,632 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,632 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,632 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,632 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:44,632 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:44,632 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,645 westpa/mclib/_mclib.c:23675:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,646 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,646 | ^ 2021-07-15T16:50:44,646 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,646 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,646 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,646 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:44,646 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:44,646 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,659 westpa/mclib/_mclib.c:23675:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,660 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,660 | ^ 2021-07-15T16:50:44,660 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,660 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,660 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,660 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:44,660 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:44,660 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,673 westpa/mclib/_mclib.c:23675:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,673 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,674 | ^ 2021-07-15T16:50:44,674 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,674 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,674 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,674 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:44,674 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:44,674 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,690 westpa/mclib/_mclib.c:23691:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,690 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,690 | ^ 2021-07-15T16:50:44,690 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,691 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,691 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,691 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:44,691 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:44,691 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,704 westpa/mclib/_mclib.c:23691:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,704 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,704 | ^ 2021-07-15T16:50:44,704 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,705 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,705 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,705 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:44,705 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:44,705 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,718 westpa/mclib/_mclib.c:23691:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,718 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,718 | ^ 2021-07-15T16:50:44,718 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,719 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,719 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,719 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:44,719 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:44,719 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,732 westpa/mclib/_mclib.c:23691:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,732 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,732 | ^ 2021-07-15T16:50:44,733 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,733 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,733 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,733 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:44,733 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:44,733 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,746 westpa/mclib/_mclib.c:23691:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,746 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,746 | ^ 2021-07-15T16:50:44,746 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,747 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,747 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,747 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:44,747 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:44,747 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,760 westpa/mclib/_mclib.c:23691:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,760 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:44,760 | ^ 2021-07-15T16:50:44,760 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,761 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,761 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,761 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:44,761 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:44,761 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:44,968 westpa/mclib/_mclib.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:50:44,980 westpa/mclib/_mclib.c:25372:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:44,980 25372 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:50:44,980 | ^~~~~~ 2021-07-15T16:50:44,981 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:44,981 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:44,981 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:44,981 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:50:44,981 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:50:44,981 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:10,407 creating build/lib.linux-armv7l-3.9/westpa/mclib 2021-07-15T16:51:10,407 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/mclib/_mclib.o -o build/lib.linux-armv7l-3.9/westpa/mclib/_mclib.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:51:10,597 building 'westpa.binning._assign' extension 2021-07-15T16:51:10,598 creating build/temp.linux-armv7l-3.9/westpa/binning 2021-07-15T16:51:10,598 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/binning/_assign.c -o build/temp.linux-armv7l-3.9/westpa/binning/_assign.o -O3 2021-07-15T16:51:10,976 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:51:10,977 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:51:10,977 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:51:10,977 from westpa/binning/_assign.c:598: 2021-07-15T16:51:10,977 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:51:10,978 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:51:10,978 | ^~~~~~~ 2021-07-15T16:51:11,865 westpa/binning/_assign.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:51:11,883 westpa/binning/_assign.c:26381:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:11,883 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:11,883 | ^ 2021-07-15T16:51:11,883 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:11,883 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:11,884 from westpa/binning/_assign.c:4: 2021-07-15T16:51:11,884 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:11,884 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:11,884 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:11,904 westpa/binning/_assign.c:26381:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:11,905 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:11,905 | ^ 2021-07-15T16:51:11,905 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:11,905 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:11,905 from westpa/binning/_assign.c:4: 2021-07-15T16:51:11,905 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:11,905 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:11,906 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:11,926 westpa/binning/_assign.c:26381:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:11,926 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:11,926 | ^ 2021-07-15T16:51:11,926 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:11,926 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:11,927 from westpa/binning/_assign.c:4: 2021-07-15T16:51:11,927 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:11,927 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:11,927 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:11,947 westpa/binning/_assign.c:26381:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:11,947 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:11,947 | ^ 2021-07-15T16:51:11,948 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:11,948 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:11,948 from westpa/binning/_assign.c:4: 2021-07-15T16:51:11,948 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:11,948 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:11,948 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:11,968 westpa/binning/_assign.c:26381:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:11,969 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:11,969 | ^ 2021-07-15T16:51:11,969 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:11,969 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:11,969 from westpa/binning/_assign.c:4: 2021-07-15T16:51:11,969 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:11,969 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:11,969 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:11,990 westpa/binning/_assign.c:26381:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:11,990 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:11,990 | ^ 2021-07-15T16:51:11,990 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:11,990 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:11,990 from westpa/binning/_assign.c:4: 2021-07-15T16:51:11,990 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:11,991 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:11,991 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:12,015 westpa/binning/_assign.c:26397:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:12,015 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:12,015 | ^ 2021-07-15T16:51:12,015 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:12,016 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:12,016 from westpa/binning/_assign.c:4: 2021-07-15T16:51:12,016 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:12,016 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:12,016 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:12,036 westpa/binning/_assign.c:26397:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:12,036 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:12,037 | ^ 2021-07-15T16:51:12,037 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:12,037 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:12,037 from westpa/binning/_assign.c:4: 2021-07-15T16:51:12,037 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:12,037 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:12,037 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:12,057 westpa/binning/_assign.c:26397:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:12,058 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:12,058 | ^ 2021-07-15T16:51:12,058 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:12,058 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:12,058 from westpa/binning/_assign.c:4: 2021-07-15T16:51:12,058 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:12,058 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:12,059 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:12,079 westpa/binning/_assign.c:26397:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:12,079 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:12,079 | ^ 2021-07-15T16:51:12,079 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:12,079 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:12,080 from westpa/binning/_assign.c:4: 2021-07-15T16:51:12,080 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:12,080 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:12,080 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:12,100 westpa/binning/_assign.c:26397:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:12,100 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:12,100 | ^ 2021-07-15T16:51:12,101 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:12,101 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:12,101 from westpa/binning/_assign.c:4: 2021-07-15T16:51:12,101 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:12,101 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:12,101 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:12,121 westpa/binning/_assign.c:26397:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:12,122 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:12,122 | ^ 2021-07-15T16:51:12,122 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:12,122 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:12,122 from westpa/binning/_assign.c:4: 2021-07-15T16:51:12,122 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:12,122 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:12,122 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:12,270 westpa/binning/_assign.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:51:12,288 westpa/binning/_assign.c:27049:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:12,289 27049 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:51:12,289 | ^~~~~~ 2021-07-15T16:51:12,289 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:12,289 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:12,289 from westpa/binning/_assign.c:4: 2021-07-15T16:51:12,289 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:51:12,289 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:51:12,290 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:29,578 westpa/binning/_assign.c: In function ‘__pyx_pw_6westpa_7binning_7_assign_1rectilinear_assign’: 2021-07-15T16:51:29,580 westpa/binning/_assign.c:3206:159: warning: ‘__pyx_v_index’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:51:29,580 3206 | *((__pyx_t_6westpa_7binning_7_assign_index_t *) ( /* dim=0 */ (__pyx_v_output.data + __pyx_t_30 * __pyx_v_output.strides[0]) )) += (__pyx_v_index * __pyx_v_stridefac); 2021-07-15T16:51:29,580 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:29,581 westpa/binning/_assign.c:2697:45: note: ‘__pyx_v_index’ was declared here 2021-07-15T16:51:29,582 2697 | __pyx_t_6westpa_7binning_7_assign_index_t __pyx_v_index; 2021-07-15T16:51:29,582 | ^~~~~~~~~~~~~ 2021-07-15T16:51:37,784 creating build/lib.linux-armv7l-3.9/westpa/binning 2021-07-15T16:51:37,784 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/binning/_assign.o -o build/lib.linux-armv7l-3.9/westpa/binning/_assign.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:51:37,980 building 'westpa.kinetics._kinetics' extension 2021-07-15T16:51:37,981 creating build/temp.linux-armv7l-3.9/westpa/kinetics 2021-07-15T16:51:37,981 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/kinetics/_kinetics.c -o build/temp.linux-armv7l-3.9/westpa/kinetics/_kinetics.o -O3 2021-07-15T16:51:38,367 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:51:38,367 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:51:38,367 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:51:38,367 from westpa/kinetics/_kinetics.c:598: 2021-07-15T16:51:38,367 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:51:38,368 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:51:38,368 | ^~~~~~~ 2021-07-15T16:51:39,325 westpa/kinetics/_kinetics.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:51:39,342 westpa/kinetics/_kinetics.c:33317:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,342 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,342 | ^ 2021-07-15T16:51:39,342 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,342 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,343 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,343 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:39,343 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:39,343 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,362 westpa/kinetics/_kinetics.c:33317:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,363 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,363 | ^ 2021-07-15T16:51:39,363 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,363 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,363 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,363 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:39,363 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:39,364 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,383 westpa/kinetics/_kinetics.c:33317:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,383 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,383 | ^ 2021-07-15T16:51:39,383 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,383 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,383 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,384 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:39,384 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:39,384 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,403 westpa/kinetics/_kinetics.c:33317:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,403 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,403 | ^ 2021-07-15T16:51:39,403 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,404 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,404 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,404 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:39,404 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:39,404 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,423 westpa/kinetics/_kinetics.c:33317:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,423 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,423 | ^ 2021-07-15T16:51:39,424 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,424 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,424 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,424 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:39,424 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:39,424 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,443 westpa/kinetics/_kinetics.c:33317:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,444 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,444 | ^ 2021-07-15T16:51:39,444 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,444 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,444 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,444 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:39,444 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:39,444 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,468 westpa/kinetics/_kinetics.c:33333:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,468 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,468 | ^ 2021-07-15T16:51:39,468 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,468 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,468 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,468 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:39,468 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:39,469 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,488 westpa/kinetics/_kinetics.c:33333:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,488 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,488 | ^ 2021-07-15T16:51:39,488 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,488 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,488 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,489 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:39,489 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:39,489 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,508 westpa/kinetics/_kinetics.c:33333:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,508 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,508 | ^ 2021-07-15T16:51:39,509 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,509 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,509 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,509 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:39,509 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:39,509 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,528 westpa/kinetics/_kinetics.c:33333:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,529 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,529 | ^ 2021-07-15T16:51:39,529 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,529 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,529 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,529 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:39,529 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:39,529 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,549 westpa/kinetics/_kinetics.c:33333:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,549 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,549 | ^ 2021-07-15T16:51:39,549 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,549 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,549 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,549 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:39,549 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:39,550 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,569 westpa/kinetics/_kinetics.c:33333:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,569 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:39,569 | ^ 2021-07-15T16:51:39,569 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,569 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,570 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,570 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:39,570 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:39,570 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:39,884 westpa/kinetics/_kinetics.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:51:39,902 westpa/kinetics/_kinetics.c:34863:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:39,902 34863 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:51:39,902 | ^~~~~~ 2021-07-15T16:51:39,902 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:39,903 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:39,903 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:39,903 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:51:39,903 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:51:39,903 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:59,863 westpa/kinetics/_kinetics.c: In function ‘__pyx_pw_6westpa_8kinetics_9_kinetics_27find_macrostate_transitions’: 2021-07-15T16:51:59,869 westpa/kinetics/_kinetics.c:9998:106: warning: ‘__pyx_v_tm’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:51:59,869 9998 | *((double *) ( /* dim=0 */ (__pyx_v__last_time.data + __pyx_t_54 * __pyx_v__last_time.strides[0]) )) = __pyx_v_tm; 2021-07-15T16:51:59,869 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2021-07-15T16:51:59,875 westpa/kinetics/_kinetics.c:9501:10: note: ‘__pyx_v_tm’ was declared here 2021-07-15T16:51:59,875 9501 | double __pyx_v_tm; 2021-07-15T16:51:59,875 | ^~~~~~~~~~ 2021-07-15T16:52:07,798 westpa/kinetics/_kinetics.c: In function ‘__pyx_pw_6westpa_8kinetics_9_kinetics_23sequence_macro_flux_to_rate’: 2021-07-15T16:52:07,799 westpa/kinetics/_kinetics.c:1617:79: warning: ‘__pyx_v_iiter’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:52:07,799 1617 | __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ 2021-07-15T16:52:07,799 | ^~ 2021-07-15T16:52:07,799 1618 | (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\ 2021-07-15T16:52:07,799 | 2021-07-15T16:52:07,803 westpa/kinetics/_kinetics.c:7507:14: note: ‘__pyx_v_iiter’ was declared here 2021-07-15T16:52:07,804 7507 | Py_ssize_t __pyx_v_iiter; 2021-07-15T16:52:07,804 | ^~~~~~~~~~~~~ 2021-07-15T16:52:15,692 creating build/lib.linux-armv7l-3.9/westpa/kinetics 2021-07-15T16:52:15,692 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/kinetics/_kinetics.o -o build/lib.linux-armv7l-3.9/westpa/kinetics/_kinetics.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:52:15,926 building 'westpa.reweight._reweight' extension 2021-07-15T16:52:15,927 creating build/temp.linux-armv7l-3.9/westpa/reweight 2021-07-15T16:52:15,927 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/reweight/_reweight.c -o build/temp.linux-armv7l-3.9/westpa/reweight/_reweight.o -O3 2021-07-15T16:52:16,312 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:52:16,312 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:52:16,313 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:52:16,313 from westpa/reweight/_reweight.c:598: 2021-07-15T16:52:16,313 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:52:16,313 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:52:16,313 | ^~~~~~~ 2021-07-15T16:52:17,031 westpa/reweight/_reweight.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:52:17,045 westpa/reweight/_reweight.c:26899:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,045 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,045 | ^ 2021-07-15T16:52:17,046 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,046 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,046 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,046 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:17,046 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:17,046 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,062 westpa/reweight/_reweight.c:26899:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,062 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,062 | ^ 2021-07-15T16:52:17,062 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,062 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,063 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,063 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:52:17,063 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:52:17,063 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,078 westpa/reweight/_reweight.c:26899:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,078 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,079 | ^ 2021-07-15T16:52:17,079 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,079 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,079 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,079 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:17,079 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:17,079 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,095 westpa/reweight/_reweight.c:26899:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,095 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,095 | ^ 2021-07-15T16:52:17,095 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,095 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,095 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,095 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:17,096 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:17,096 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,111 westpa/reweight/_reweight.c:26899:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,111 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,111 | ^ 2021-07-15T16:52:17,112 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,112 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,112 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,112 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:52:17,112 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:52:17,112 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,127 westpa/reweight/_reweight.c:26899:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,128 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,128 | ^ 2021-07-15T16:52:17,128 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,128 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,128 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,128 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:17,128 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:17,129 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,147 westpa/reweight/_reweight.c:26915:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,147 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,147 | ^ 2021-07-15T16:52:17,147 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,147 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,147 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,148 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:17,148 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:17,148 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,163 westpa/reweight/_reweight.c:26915:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,163 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,163 | ^ 2021-07-15T16:52:17,164 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,164 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,164 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,164 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:52:17,164 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:52:17,164 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,180 westpa/reweight/_reweight.c:26915:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,180 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,180 | ^ 2021-07-15T16:52:17,180 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,180 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,180 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,180 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:17,181 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:17,181 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,196 westpa/reweight/_reweight.c:26915:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,196 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,196 | ^ 2021-07-15T16:52:17,196 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,197 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,197 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,197 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:17,197 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:17,197 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,212 westpa/reweight/_reweight.c:26915:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,213 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,213 | ^ 2021-07-15T16:52:17,213 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,213 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,213 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,213 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:52:17,213 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:52:17,213 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,229 westpa/reweight/_reweight.c:26915:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,229 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:17,229 | ^ 2021-07-15T16:52:17,229 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,229 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,230 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,230 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:17,230 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:17,230 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:17,419 westpa/reweight/_reweight.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:52:17,433 westpa/reweight/_reweight.c:28078:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:17,434 28078 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:52:17,434 | ^~~~~~ 2021-07-15T16:52:17,434 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:17,434 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:17,434 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:17,434 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:52:17,434 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:52:17,434 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:46,970 creating build/lib.linux-armv7l-3.9/westpa/reweight 2021-07-15T16:52:46,970 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/reweight/_reweight.o -o build/lib.linux-armv7l-3.9/westpa/reweight/_reweight.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:52:47,168 running build_scripts 2021-07-15T16:52:47,169 creating build/scripts-3.9 2021-07-15T16:52:47,171 copying westpa/scripts/w_kinetics.py -> build/scripts-3.9 2021-07-15T16:52:47,174 copying westpa/scripts/w_assign.py -> build/scripts-3.9 2021-07-15T16:52:47,178 copying westpa/scripts/w_ntop.py -> build/scripts-3.9 2021-07-15T16:52:47,181 copying westpa/scripts/w_kinavg.py -> build/scripts-3.9 2021-07-15T16:52:47,184 copying westpa/scripts/ploterr.py -> build/scripts-3.9 2021-07-15T16:52:47,188 copying westpa/scripts/w_trace.py -> build/scripts-3.9 2021-07-15T16:52:47,191 copying westpa/scripts/plothist.py -> build/scripts-3.9 2021-07-15T16:52:47,195 copying westpa/scripts/w_select.py -> build/scripts-3.9 2021-07-15T16:52:47,199 copying westpa/scripts/w_fork.py -> build/scripts-3.9 2021-07-15T16:52:47,202 copying westpa/scripts/w_postanalysis_matrix.py -> build/scripts-3.9 2021-07-15T16:52:47,205 copying westpa/scripts/w_crawl.py -> build/scripts-3.9 2021-07-15T16:52:47,208 copying westpa/scripts/w_dumpsegs.py -> build/scripts-3.9 2021-07-15T16:52:47,211 copying westpa/scripts/w_reweight.py -> build/scripts-3.9 2021-07-15T16:52:47,215 copying westpa/scripts/w_init.py -> build/scripts-3.9 2021-07-15T16:52:47,219 copying westpa/scripts/w_direct.py -> build/scripts-3.9 2021-07-15T16:52:47,223 copying westpa/scripts/w_succ.py -> build/scripts-3.9 2021-07-15T16:52:47,225 copying westpa/scripts/w_postanalysis_reweight.py -> build/scripts-3.9 2021-07-15T16:52:47,228 copying westpa/scripts/w_pdist.py -> build/scripts-3.9 2021-07-15T16:52:47,233 copying westpa/scripts/w_bins.py -> build/scripts-3.9 2021-07-15T16:52:47,236 copying westpa/scripts/w_fluxanl.py -> build/scripts-3.9 2021-07-15T16:52:47,240 copying westpa/scripts/w_eddist.py -> build/scripts-3.9 2021-07-15T16:52:47,244 copying westpa/scripts/w_states.py -> build/scripts-3.9 2021-07-15T16:52:47,248 copying westpa/scripts/w_truncate.py -> build/scripts-3.9 2021-07-15T16:52:47,250 copying westpa/scripts/w_run.py -> build/scripts-3.9 2021-07-15T16:52:47,253 copying westpa/scripts/w_ipa.py -> build/scripts-3.9 2021-07-15T16:52:47,257 copying westpa/scripts/w_stateprobs.py -> build/scripts-3.9 2021-07-15T16:52:47,259 changing mode of build/scripts-3.9/w_kinetics.py from 644 to 755 2021-07-15T16:52:47,260 changing mode of build/scripts-3.9/w_assign.py from 644 to 755 2021-07-15T16:52:47,260 changing mode of build/scripts-3.9/w_ntop.py from 644 to 755 2021-07-15T16:52:47,261 changing mode of build/scripts-3.9/w_kinavg.py from 644 to 755 2021-07-15T16:52:47,262 changing mode of build/scripts-3.9/ploterr.py from 644 to 755 2021-07-15T16:52:47,262 changing mode of build/scripts-3.9/w_trace.py from 644 to 755 2021-07-15T16:52:47,263 changing mode of build/scripts-3.9/plothist.py from 644 to 755 2021-07-15T16:52:47,263 changing mode of build/scripts-3.9/w_select.py from 644 to 755 2021-07-15T16:52:47,264 changing mode of build/scripts-3.9/w_fork.py from 644 to 755 2021-07-15T16:52:47,264 changing mode of build/scripts-3.9/w_postanalysis_matrix.py from 644 to 755 2021-07-15T16:52:47,265 changing mode of build/scripts-3.9/w_crawl.py from 644 to 755 2021-07-15T16:52:47,265 changing mode of build/scripts-3.9/w_dumpsegs.py from 644 to 755 2021-07-15T16:52:47,266 changing mode of build/scripts-3.9/w_reweight.py from 644 to 755 2021-07-15T16:52:47,266 changing mode of build/scripts-3.9/w_init.py from 644 to 755 2021-07-15T16:52:47,267 changing mode of build/scripts-3.9/w_direct.py from 644 to 755 2021-07-15T16:52:47,267 changing mode of build/scripts-3.9/w_succ.py from 644 to 755 2021-07-15T16:52:47,268 changing mode of build/scripts-3.9/w_postanalysis_reweight.py from 644 to 755 2021-07-15T16:52:47,268 changing mode of build/scripts-3.9/w_pdist.py from 644 to 755 2021-07-15T16:52:47,269 changing mode of build/scripts-3.9/w_bins.py from 644 to 755 2021-07-15T16:52:47,269 changing mode of build/scripts-3.9/w_fluxanl.py from 644 to 755 2021-07-15T16:52:47,270 changing mode of build/scripts-3.9/w_eddist.py from 644 to 755 2021-07-15T16:52:47,270 changing mode of build/scripts-3.9/w_states.py from 644 to 755 2021-07-15T16:52:47,271 changing mode of build/scripts-3.9/w_truncate.py from 644 to 755 2021-07-15T16:52:47,271 changing mode of build/scripts-3.9/w_run.py from 644 to 755 2021-07-15T16:52:47,272 changing mode of build/scripts-3.9/w_ipa.py from 644 to 755 2021-07-15T16:52:47,272 changing mode of build/scripts-3.9/w_stateprobs.py from 644 to 755 2021-07-15T16:52:47,284 installing to build/bdist.linux-armv7l/wheel 2021-07-15T16:52:47,284 running install 2021-07-15T16:52:47,286 running install_lib 2021-07-15T16:52:47,291 creating build/bdist.linux-armv7l 2021-07-15T16:52:47,292 creating build/bdist.linux-armv7l/wheel 2021-07-15T16:52:47,294 creating build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,295 creating build/bdist.linux-armv7l/wheel/westpa/binning 2021-07-15T16:52:47,296 copying build/lib.linux-armv7l-3.9/westpa/binning/_assign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/binning 2021-07-15T16:52:47,329 copying build/lib.linux-armv7l-3.9/westpa/sim_manager.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,333 copying build/lib.linux-armv7l-3.9/westpa/data_manager.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,339 copying build/lib.linux-armv7l-3.9/westpa/segment.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,341 copying build/lib.linux-armv7l-3.9/westpa/yamlcfg.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,344 copying build/lib.linux-armv7l-3.9/westpa/textio.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,347 creating build/bdist.linux-armv7l/wheel/westpa/fasthist 2021-07-15T16:52:47,348 copying build/lib.linux-armv7l-3.9/westpa/fasthist/_fasthist.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/fasthist 2021-07-15T16:52:47,383 copying build/lib.linux-armv7l-3.9/westpa/we_driver.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,386 copying build/lib.linux-armv7l-3.9/westpa/_rc.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,390 creating build/bdist.linux-armv7l/wheel/westpa/kinetics 2021-07-15T16:52:47,391 copying build/lib.linux-armv7l-3.9/westpa/kinetics/_kinetics.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/kinetics 2021-07-15T16:52:47,442 creating build/bdist.linux-armv7l/wheel/westpa/reweight 2021-07-15T16:52:47,443 copying build/lib.linux-armv7l-3.9/westpa/reweight/_reweight.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/reweight 2021-07-15T16:52:47,483 copying build/lib.linux-armv7l-3.9/westpa/__init__.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,485 copying build/lib.linux-armv7l-3.9/westpa/systems.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,488 creating build/bdist.linux-armv7l/wheel/westpa/mclib 2021-07-15T16:52:47,489 copying build/lib.linux-armv7l-3.9/westpa/mclib/_mclib.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/mclib 2021-07-15T16:52:47,525 copying build/lib.linux-armv7l-3.9/westpa/progress.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,527 copying build/lib.linux-armv7l-3.9/westpa/states.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,530 copying build/lib.linux-armv7l-3.9/westpa/extloader.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,532 copying build/lib.linux-armv7l-3.9/westpa/h5io.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,535 copying build/lib.linux-armv7l-3.9/westpa/wm_ops.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:47,537 running install_egg_info 2021-07-15T16:52:47,562 running egg_info 2021-07-15T16:52:47,563 creating westpa.egg-info 2021-07-15T16:52:47,564 writing westpa.egg-info/PKG-INFO 2021-07-15T16:52:47,567 writing dependency_links to westpa.egg-info/dependency_links.txt 2021-07-15T16:52:47,569 writing requirements to westpa.egg-info/requires.txt 2021-07-15T16:52:47,570 writing top-level names to westpa.egg-info/top_level.txt 2021-07-15T16:52:47,572 writing manifest file 'westpa.egg-info/SOURCES.txt' 2021-07-15T16:52:47,610 reading manifest file 'westpa.egg-info/SOURCES.txt' 2021-07-15T16:52:47,612 reading manifest template 'MANIFEST.in' 2021-07-15T16:52:47,788 writing manifest file 'westpa.egg-info/SOURCES.txt' 2021-07-15T16:52:47,790 Copying westpa.egg-info to build/bdist.linux-armv7l/wheel/westpa-0.0.2-py3.9.egg-info 2021-07-15T16:52:47,802 running install_scripts 2021-07-15T16:52:47,869 creating build/bdist.linux-armv7l/wheel/westpa-0.0.2.data 2021-07-15T16:52:47,869 creating build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,871 copying build/scripts-3.9/w_kinetics.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,873 copying build/scripts-3.9/w_assign.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,876 copying build/scripts-3.9/w_ntop.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,879 copying build/scripts-3.9/w_kinavg.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,881 copying build/scripts-3.9/ploterr.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,884 copying build/scripts-3.9/w_trace.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,888 copying build/scripts-3.9/plothist.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,891 copying build/scripts-3.9/w_select.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,893 copying build/scripts-3.9/w_fork.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,896 copying build/scripts-3.9/w_postanalysis_matrix.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,898 copying build/scripts-3.9/w_crawl.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,901 copying build/scripts-3.9/w_dumpsegs.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,903 copying build/scripts-3.9/w_reweight.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,907 copying build/scripts-3.9/w_init.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,910 copying build/scripts-3.9/w_direct.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,913 copying build/scripts-3.9/w_succ.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,915 copying build/scripts-3.9/w_postanalysis_reweight.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,917 copying build/scripts-3.9/w_pdist.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,921 copying build/scripts-3.9/w_bins.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,924 copying build/scripts-3.9/w_fluxanl.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,927 copying build/scripts-3.9/w_eddist.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,930 copying build/scripts-3.9/w_states.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,933 copying build/scripts-3.9/w_truncate.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,935 copying build/scripts-3.9/w_run.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,937 copying build/scripts-3.9/w_ipa.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,941 copying build/scripts-3.9/w_stateprobs.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts 2021-07-15T16:52:47,944 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_kinetics.py to 755 2021-07-15T16:52:47,944 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_assign.py to 755 2021-07-15T16:52:47,945 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_ntop.py to 755 2021-07-15T16:52:47,945 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_kinavg.py to 755 2021-07-15T16:52:47,946 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/ploterr.py to 755 2021-07-15T16:52:47,947 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_trace.py to 755 2021-07-15T16:52:47,947 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/plothist.py to 755 2021-07-15T16:52:47,948 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_select.py to 755 2021-07-15T16:52:47,948 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_fork.py to 755 2021-07-15T16:52:47,949 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_postanalysis_matrix.py to 755 2021-07-15T16:52:47,949 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_crawl.py to 755 2021-07-15T16:52:47,950 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_dumpsegs.py to 755 2021-07-15T16:52:47,950 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_reweight.py to 755 2021-07-15T16:52:47,951 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_init.py to 755 2021-07-15T16:52:47,951 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_direct.py to 755 2021-07-15T16:52:47,952 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_succ.py to 755 2021-07-15T16:52:47,952 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_postanalysis_reweight.py to 755 2021-07-15T16:52:47,953 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_pdist.py to 755 2021-07-15T16:52:47,953 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_bins.py to 755 2021-07-15T16:52:47,954 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_fluxanl.py to 755 2021-07-15T16:52:47,954 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_eddist.py to 755 2021-07-15T16:52:47,955 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_states.py to 755 2021-07-15T16:52:47,955 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_truncate.py to 755 2021-07-15T16:52:47,956 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_run.py to 755 2021-07-15T16:52:47,956 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_ipa.py to 755 2021-07-15T16:52:47,957 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.2.data/scripts/w_stateprobs.py to 755 2021-07-15T16:52:47,980 creating build/bdist.linux-armv7l/wheel/westpa-0.0.2.dist-info/WHEEL 2021-07-15T16:52:47,983 creating '/tmp/pip-wheel-rlr9c9as/westpa-0.0.2-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-15T16:52:47,985 adding 'westpa/__init__.py' 2021-07-15T16:52:47,989 adding 'westpa/_rc.py' 2021-07-15T16:52:47,999 adding 'westpa/data_manager.py' 2021-07-15T16:52:48,001 adding 'westpa/extloader.py' 2021-07-15T16:52:48,005 adding 'westpa/h5io.py' 2021-07-15T16:52:48,007 adding 'westpa/progress.py' 2021-07-15T16:52:48,009 adding 'westpa/segment.py' 2021-07-15T16:52:48,014 adding 'westpa/sim_manager.py' 2021-07-15T16:52:48,016 adding 'westpa/states.py' 2021-07-15T16:52:48,018 adding 'westpa/systems.py' 2021-07-15T16:52:48,020 adding 'westpa/textio.py' 2021-07-15T16:52:48,024 adding 'westpa/we_driver.py' 2021-07-15T16:52:48,026 adding 'westpa/wm_ops.py' 2021-07-15T16:52:48,029 adding 'westpa/yamlcfg.py' 2021-07-15T16:52:48,315 adding 'westpa/binning/_assign.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:48,611 adding 'westpa/fasthist/_fasthist.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:49,011 adding 'westpa/kinetics/_kinetics.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:49,306 adding 'westpa/mclib/_mclib.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:49,604 adding 'westpa/reweight/_reweight.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:49,620 adding 'westpa-0.0.2.data/scripts/ploterr.py' 2021-07-15T16:52:49,623 adding 'westpa-0.0.2.data/scripts/plothist.py' 2021-07-15T16:52:49,628 adding 'westpa-0.0.2.data/scripts/w_assign.py' 2021-07-15T16:52:49,630 adding 'westpa-0.0.2.data/scripts/w_bins.py' 2021-07-15T16:52:49,632 adding 'westpa-0.0.2.data/scripts/w_crawl.py' 2021-07-15T16:52:49,635 adding 'westpa-0.0.2.data/scripts/w_direct.py' 2021-07-15T16:52:49,637 adding 'westpa-0.0.2.data/scripts/w_dumpsegs.py' 2021-07-15T16:52:49,640 adding 'westpa-0.0.2.data/scripts/w_eddist.py' 2021-07-15T16:52:49,643 adding 'westpa-0.0.2.data/scripts/w_fluxanl.py' 2021-07-15T16:52:49,645 adding 'westpa-0.0.2.data/scripts/w_fork.py' 2021-07-15T16:52:49,647 adding 'westpa-0.0.2.data/scripts/w_init.py' 2021-07-15T16:52:49,652 adding 'westpa-0.0.2.data/scripts/w_ipa.py' 2021-07-15T16:52:49,655 adding 'westpa-0.0.2.data/scripts/w_kinavg.py' 2021-07-15T16:52:49,657 adding 'westpa-0.0.2.data/scripts/w_kinetics.py' 2021-07-15T16:52:49,659 adding 'westpa-0.0.2.data/scripts/w_ntop.py' 2021-07-15T16:52:49,662 adding 'westpa-0.0.2.data/scripts/w_pdist.py' 2021-07-15T16:52:49,664 adding 'westpa-0.0.2.data/scripts/w_postanalysis_matrix.py' 2021-07-15T16:52:49,666 adding 'westpa-0.0.2.data/scripts/w_postanalysis_reweight.py' 2021-07-15T16:52:49,670 adding 'westpa-0.0.2.data/scripts/w_reweight.py' 2021-07-15T16:52:49,672 adding 'westpa-0.0.2.data/scripts/w_run.py' 2021-07-15T16:52:49,674 adding 'westpa-0.0.2.data/scripts/w_select.py' 2021-07-15T16:52:49,676 adding 'westpa-0.0.2.data/scripts/w_stateprobs.py' 2021-07-15T16:52:49,678 adding 'westpa-0.0.2.data/scripts/w_states.py' 2021-07-15T16:52:49,680 adding 'westpa-0.0.2.data/scripts/w_succ.py' 2021-07-15T16:52:49,684 adding 'westpa-0.0.2.data/scripts/w_trace.py' 2021-07-15T16:52:49,685 adding 'westpa-0.0.2.data/scripts/w_truncate.py' 2021-07-15T16:52:49,688 adding 'westpa-0.0.2.dist-info/METADATA' 2021-07-15T16:52:49,689 adding 'westpa-0.0.2.dist-info/WHEEL' 2021-07-15T16:52:49,690 adding 'westpa-0.0.2.dist-info/top_level.txt' 2021-07-15T16:52:49,692 adding 'westpa-0.0.2.dist-info/RECORD' 2021-07-15T16:52:49,745 removing build/bdist.linux-armv7l/wheel 2021-07-15T16:52:49,893 Building wheel for westpa (setup.py): finished with status 'done' 2021-07-15T16:52:49,932 Created wheel for westpa: filename=westpa-0.0.2-cp39-cp39-linux_armv7l.whl size=2984955 sha256=8509f9b39ad64419d29b6f438ddb27216474513474b4f93982348610125b3bb8 2021-07-15T16:52:49,933 Stored in directory: /tmp/pip-ephem-wheel-cache-8w9gp8wm/wheels/99/c7/4a/586c1bfab1967aaed9dddee2cb6c82ca92d748f52dd23ed5ee 2021-07-15T16:52:49,944 Successfully built westpa 2021-07-15T16:52:50,052 Removed build tracker: '/tmp/pip-req-tracker-qhitxs41'