2021-07-15T16:50:10,798 Created temporary directory: /tmp/pip-ephem-wheel-cache-rjjgd11x 2021-07-15T16:50:10,801 Created temporary directory: /tmp/pip-req-tracker-ovk9go92 2021-07-15T16:50:10,801 Initialized build tracking at /tmp/pip-req-tracker-ovk9go92 2021-07-15T16:50:10,801 Created build tracker: /tmp/pip-req-tracker-ovk9go92 2021-07-15T16:50:10,802 Entered build tracker: /tmp/pip-req-tracker-ovk9go92 2021-07-15T16:50:10,802 Created temporary directory: /tmp/pip-wheel-y8ez252c 2021-07-15T16:50:10,833 1 location(s) to search for versions of westpa: 2021-07-15T16:50:10,833 * https://pypi.org/simple/westpa/ 2021-07-15T16:50:10,833 Fetching project page and analyzing links: https://pypi.org/simple/westpa/ 2021-07-15T16:50:10,834 Getting page https://pypi.org/simple/westpa/ 2021-07-15T16:50:10,835 Found index url https://pypi.org/simple 2021-07-15T16:50:10,926 Found link https://files.pythonhosted.org/packages/a8/57/c4b43d48677bb48b620e3f0cda3c71aa997ab3a039ba4ba0cb05d807df19/westpa-0.0.2.tar.gz#sha256=0e8c0ce2ffe19a92d66528962c6a9e1175208010ad65885e77deee9fcf429d0e (from https://pypi.org/simple/westpa/), version: 0.0.2 2021-07-15T16:50:10,926 Found link https://files.pythonhosted.org/packages/b0/49/26240704f4fcc44e3187b617d080c7b96a1f8b4004a79b19b189bf738a49/westpa-0.0.3.tar.gz#sha256=227f5f9dce782401892d9c38f7336a5ba6b864e964b9a9ec3201bb31935cc083 (from https://pypi.org/simple/westpa/), version: 0.0.3 2021-07-15T16:50:10,927 Skipping link: not a file: https://pypi.org/simple/westpa/ 2021-07-15T16:50:10,945 Given no hashes to check 1 links for project 'westpa': discarding no candidates 2021-07-15T16:50:10,964 Collecting westpa==0.0.3 2021-07-15T16:50:10,965 Created temporary directory: /tmp/pip-unpack-4ewf3nhe 2021-07-15T16:50:11,346 Downloading westpa-0.0.3.tar.gz (987 kB) 2021-07-15T16:50:12,033 Added westpa==0.0.3 from https://files.pythonhosted.org/packages/b0/49/26240704f4fcc44e3187b617d080c7b96a1f8b4004a79b19b189bf738a49/westpa-0.0.3.tar.gz#sha256=227f5f9dce782401892d9c38f7336a5ba6b864e964b9a9ec3201bb31935cc083 to build tracker '/tmp/pip-req-tracker-ovk9go92' 2021-07-15T16:50:12,034 Running setup.py (path:/tmp/pip-wheel-y8ez252c/westpa_d1524700837941bea7fa7595b57f65ea/setup.py) egg_info for package westpa 2021-07-15T16:50:12,034 Created temporary directory: /tmp/pip-pip-egg-info-ddngx1oe 2021-07-15T16:50:12,035 Running command python setup.py egg_info 2021-07-15T16:50:13,957 Regenerating C extension code using Cython: True 2021-07-15T16:50:13,958 running egg_info 2021-07-15T16:50:13,959 creating /tmp/pip-pip-egg-info-ddngx1oe/westpa.egg-info 2021-07-15T16:50:13,961 writing /tmp/pip-pip-egg-info-ddngx1oe/westpa.egg-info/PKG-INFO 2021-07-15T16:50:13,962 writing dependency_links to /tmp/pip-pip-egg-info-ddngx1oe/westpa.egg-info/dependency_links.txt 2021-07-15T16:50:13,964 writing requirements to /tmp/pip-pip-egg-info-ddngx1oe/westpa.egg-info/requires.txt 2021-07-15T16:50:13,965 writing top-level names to /tmp/pip-pip-egg-info-ddngx1oe/westpa.egg-info/top_level.txt 2021-07-15T16:50:13,967 writing manifest file '/tmp/pip-pip-egg-info-ddngx1oe/westpa.egg-info/SOURCES.txt' 2021-07-15T16:50:14,168 reading manifest file '/tmp/pip-pip-egg-info-ddngx1oe/westpa.egg-info/SOURCES.txt' 2021-07-15T16:50:14,170 reading manifest template 'MANIFEST.in' 2021-07-15T16:50:14,367 writing manifest file '/tmp/pip-pip-egg-info-ddngx1oe/westpa.egg-info/SOURCES.txt' 2021-07-15T16:50:14,481 Source in /tmp/pip-wheel-y8ez252c/westpa_d1524700837941bea7fa7595b57f65ea has version 0.0.3, which satisfies requirement westpa==0.0.3 from https://files.pythonhosted.org/packages/b0/49/26240704f4fcc44e3187b617d080c7b96a1f8b4004a79b19b189bf738a49/westpa-0.0.3.tar.gz#sha256=227f5f9dce782401892d9c38f7336a5ba6b864e964b9a9ec3201bb31935cc083 2021-07-15T16:50:14,482 Removed westpa==0.0.3 from https://files.pythonhosted.org/packages/b0/49/26240704f4fcc44e3187b617d080c7b96a1f8b4004a79b19b189bf738a49/westpa-0.0.3.tar.gz#sha256=227f5f9dce782401892d9c38f7336a5ba6b864e964b9a9ec3201bb31935cc083 from build tracker '/tmp/pip-req-tracker-ovk9go92' 2021-07-15T16:50:14,486 Created temporary directory: /tmp/pip-unpack-yxrqd6ga 2021-07-15T16:50:14,486 Building wheels for collected packages: westpa 2021-07-15T16:50:14,490 Created temporary directory: /tmp/pip-wheel-19kgj565 2021-07-15T16:50:14,491 Building wheel for westpa (setup.py): started 2021-07-15T16:50:14,491 Destination directory: /tmp/pip-wheel-19kgj565 2021-07-15T16:50:14,491 Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-y8ez252c/westpa_d1524700837941bea7fa7595b57f65ea/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-y8ez252c/westpa_d1524700837941bea7fa7595b57f65ea/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-19kgj565 2021-07-15T16:50:15,953 Regenerating C extension code using Cython: True 2021-07-15T16:50:16,169 running bdist_wheel 2021-07-15T16:50:16,174 running build 2021-07-15T16:50:16,175 running build_py 2021-07-15T16:50:16,309 creating build 2021-07-15T16:50:16,310 creating build/lib.linux-armv7l-3.9 2021-07-15T16:50:16,310 creating build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,312 copying westpa/__init__.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,314 copying westpa/we_driver.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,317 copying westpa/wm_ops.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,318 copying westpa/progress.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,321 copying westpa/yamlcfg.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,323 copying westpa/extloader.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,325 copying westpa/systems.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,327 copying westpa/segment.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,330 copying westpa/textio.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,332 copying westpa/h5io.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,335 copying westpa/sim_manager.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,338 copying westpa/states.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,341 copying westpa/data_manager.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,346 copying westpa/_rc.py -> build/lib.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,350 running build_ext 2021-07-15T16:50:16,443 skipping 'westpa/fasthist/_fasthist.c' Cython extension (up-to-date) 2021-07-15T16:50:16,443 skipping 'westpa/mclib/_mclib.c' Cython extension (up-to-date) 2021-07-15T16:50:16,444 skipping 'westpa/binning/_assign.c' Cython extension (up-to-date) 2021-07-15T16:50:16,444 skipping 'westpa/kinetics/_kinetics.c' Cython extension (up-to-date) 2021-07-15T16:50:16,445 skipping 'westpa/reweight/_reweight.c' Cython extension (up-to-date) 2021-07-15T16:50:16,445 building 'westpa.fasthist._fasthist' extension 2021-07-15T16:50:16,446 creating build/temp.linux-armv7l-3.9 2021-07-15T16:50:16,446 creating build/temp.linux-armv7l-3.9/westpa 2021-07-15T16:50:16,447 creating build/temp.linux-armv7l-3.9/westpa/fasthist 2021-07-15T16:50:16,447 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/fasthist/_fasthist.c -o build/temp.linux-armv7l-3.9/westpa/fasthist/_fasthist.o -O3 2021-07-15T16:50:16,853 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:50:16,853 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:50:16,853 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:50:16,853 from westpa/fasthist/_fasthist.c:598: 2021-07-15T16:50:16,853 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:50:16,853 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:50:16,854 | ^~~~~~~ 2021-07-15T16:50:17,573 westpa/fasthist/_fasthist.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:50:17,587 westpa/fasthist/_fasthist.c:29316:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,587 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,588 | ^ 2021-07-15T16:50:17,588 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,588 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,588 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,588 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:17,588 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:17,588 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,605 westpa/fasthist/_fasthist.c:29316:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,605 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,606 | ^ 2021-07-15T16:50:17,606 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,606 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,606 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,606 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:17,606 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:17,606 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,623 westpa/fasthist/_fasthist.c:29316:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,623 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,623 | ^ 2021-07-15T16:50:17,623 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,623 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,624 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,624 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:17,624 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:17,624 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,641 westpa/fasthist/_fasthist.c:29316:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,641 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,641 | ^ 2021-07-15T16:50:17,641 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,641 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,641 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,641 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:17,642 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:17,642 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,658 westpa/fasthist/_fasthist.c:29316:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,658 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,658 | ^ 2021-07-15T16:50:17,659 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,659 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,659 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,659 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:17,659 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:17,659 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,676 westpa/fasthist/_fasthist.c:29316:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,676 29316 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,676 | ^ 2021-07-15T16:50:17,676 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,676 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,676 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,677 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:17,677 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:17,677 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,697 westpa/fasthist/_fasthist.c:29332:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,697 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,697 | ^ 2021-07-15T16:50:17,697 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,697 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,697 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,698 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:17,698 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:17,698 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,714 westpa/fasthist/_fasthist.c:29332:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,714 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,715 | ^ 2021-07-15T16:50:17,715 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,715 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,715 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,715 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:17,715 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:17,715 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,732 westpa/fasthist/_fasthist.c:29332:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,732 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,732 | ^ 2021-07-15T16:50:17,732 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,732 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,733 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,733 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:17,733 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:17,733 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,749 westpa/fasthist/_fasthist.c:29332:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,750 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,750 | ^ 2021-07-15T16:50:17,750 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,750 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,750 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,750 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:17,750 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:17,751 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,767 westpa/fasthist/_fasthist.c:29332:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,767 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,767 | ^ 2021-07-15T16:50:17,768 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,768 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,768 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,768 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:17,768 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:17,768 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,785 westpa/fasthist/_fasthist.c:29332:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,785 29332 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:17,785 | ^ 2021-07-15T16:50:17,785 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,785 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,785 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,786 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:17,786 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:17,786 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:17,883 westpa/fasthist/_fasthist.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:50:17,898 westpa/fasthist/_fasthist.c:29845:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:17,898 29845 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:50:17,898 | ^~~~~~ 2021-07-15T16:50:17,898 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:17,899 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:17,899 from westpa/fasthist/_fasthist.c:4: 2021-07-15T16:50:17,899 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:50:17,899 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:50:17,899 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:46,123 creating build/lib.linux-armv7l-3.9/westpa/fasthist 2021-07-15T16:50:46,123 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/fasthist/_fasthist.o -o build/lib.linux-armv7l-3.9/westpa/fasthist/_fasthist.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:50:46,327 building 'westpa.mclib._mclib' extension 2021-07-15T16:50:46,328 creating build/temp.linux-armv7l-3.9/westpa/mclib 2021-07-15T16:50:46,328 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/mclib/_mclib.c -o build/temp.linux-armv7l-3.9/westpa/mclib/_mclib.o -O3 2021-07-15T16:50:46,711 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:50:46,711 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:50:46,711 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:50:46,711 from westpa/mclib/_mclib.c:598: 2021-07-15T16:50:46,712 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:50:46,712 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:50:46,712 | ^~~~~~~ 2021-07-15T16:50:47,338 westpa/mclib/_mclib.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:50:47,354 westpa/mclib/_mclib.c:23675:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,354 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,354 | ^ 2021-07-15T16:50:47,354 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,355 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,355 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,355 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:47,355 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:47,355 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,373 westpa/mclib/_mclib.c:23675:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,373 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,373 | ^ 2021-07-15T16:50:47,374 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,374 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,374 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,374 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:47,374 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:47,374 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,392 westpa/mclib/_mclib.c:23675:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,392 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,392 | ^ 2021-07-15T16:50:47,392 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,392 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,392 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,393 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:47,393 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:47,393 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,410 westpa/mclib/_mclib.c:23675:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,411 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,411 | ^ 2021-07-15T16:50:47,411 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,411 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,411 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,411 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:47,411 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:47,412 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,429 westpa/mclib/_mclib.c:23675:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,429 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,429 | ^ 2021-07-15T16:50:47,430 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,430 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,430 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,430 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:47,430 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:47,430 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,448 westpa/mclib/_mclib.c:23675:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,448 23675 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,448 | ^ 2021-07-15T16:50:47,448 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,448 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,449 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,449 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:47,449 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:47,449 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,470 westpa/mclib/_mclib.c:23691:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,470 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,470 | ^ 2021-07-15T16:50:47,471 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,471 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,471 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,471 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:47,471 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:47,471 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,489 westpa/mclib/_mclib.c:23691:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,489 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,489 | ^ 2021-07-15T16:50:47,489 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,490 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,490 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,490 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:47,490 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:47,490 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,508 westpa/mclib/_mclib.c:23691:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,508 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,508 | ^ 2021-07-15T16:50:47,508 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,508 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,508 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,508 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:47,509 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:47,509 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,526 westpa/mclib/_mclib.c:23691:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,526 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,527 | ^ 2021-07-15T16:50:47,527 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,527 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,527 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,527 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:47,527 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:47,527 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,545 westpa/mclib/_mclib.c:23691:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,545 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,545 | ^ 2021-07-15T16:50:47,545 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,545 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,546 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,546 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:50:47,546 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:50:47,546 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,564 westpa/mclib/_mclib.c:23691:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,564 23691 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:50:47,564 | ^ 2021-07-15T16:50:47,564 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,564 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,564 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,565 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:50:47,565 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:50:47,565 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:50:47,831 westpa/mclib/_mclib.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:50:47,848 westpa/mclib/_mclib.c:25372:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:50:47,848 25372 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:50:47,848 | ^~~~~~ 2021-07-15T16:50:47,848 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:50:47,849 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:50:47,849 from westpa/mclib/_mclib.c:4: 2021-07-15T16:50:47,849 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:50:47,849 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:50:47,849 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:13,344 creating build/lib.linux-armv7l-3.9/westpa/mclib 2021-07-15T16:51:13,344 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/mclib/_mclib.o -o build/lib.linux-armv7l-3.9/westpa/mclib/_mclib.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:51:13,533 building 'westpa.binning._assign' extension 2021-07-15T16:51:13,534 creating build/temp.linux-armv7l-3.9/westpa/binning 2021-07-15T16:51:13,534 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/binning/_assign.c -o build/temp.linux-armv7l-3.9/westpa/binning/_assign.o -O3 2021-07-15T16:51:13,919 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:51:13,919 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:51:13,920 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:51:13,920 from westpa/binning/_assign.c:598: 2021-07-15T16:51:13,920 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:51:13,920 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:51:13,920 | ^~~~~~~ 2021-07-15T16:51:14,806 westpa/binning/_assign.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:51:14,824 westpa/binning/_assign.c:26381:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:14,824 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:14,824 | ^ 2021-07-15T16:51:14,825 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:14,825 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:14,825 from westpa/binning/_assign.c:4: 2021-07-15T16:51:14,825 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:14,825 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:14,825 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:14,846 westpa/binning/_assign.c:26381:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:14,846 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:14,846 | ^ 2021-07-15T16:51:14,846 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:14,847 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:14,847 from westpa/binning/_assign.c:4: 2021-07-15T16:51:14,847 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:14,847 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:14,847 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:14,867 westpa/binning/_assign.c:26381:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:14,867 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:14,868 | ^ 2021-07-15T16:51:14,868 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:14,868 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:14,868 from westpa/binning/_assign.c:4: 2021-07-15T16:51:14,868 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:14,868 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:14,868 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:14,888 westpa/binning/_assign.c:26381:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:14,889 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:14,889 | ^ 2021-07-15T16:51:14,889 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:14,889 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:14,889 from westpa/binning/_assign.c:4: 2021-07-15T16:51:14,889 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:14,889 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:14,890 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:14,910 westpa/binning/_assign.c:26381:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:14,910 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:14,910 | ^ 2021-07-15T16:51:14,910 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:14,910 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:14,910 from westpa/binning/_assign.c:4: 2021-07-15T16:51:14,911 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:14,911 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:14,911 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:14,931 westpa/binning/_assign.c:26381:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:14,931 26381 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:14,931 | ^ 2021-07-15T16:51:14,931 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:14,932 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:14,932 from westpa/binning/_assign.c:4: 2021-07-15T16:51:14,932 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:14,932 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:14,932 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:14,956 westpa/binning/_assign.c:26397:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:14,956 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:14,956 | ^ 2021-07-15T16:51:14,957 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:14,957 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:14,957 from westpa/binning/_assign.c:4: 2021-07-15T16:51:14,957 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:14,957 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:14,957 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:14,977 westpa/binning/_assign.c:26397:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:14,978 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:14,978 | ^ 2021-07-15T16:51:14,978 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:14,978 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:14,978 from westpa/binning/_assign.c:4: 2021-07-15T16:51:14,978 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:14,978 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:14,978 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:14,999 westpa/binning/_assign.c:26397:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:14,999 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:14,999 | ^ 2021-07-15T16:51:14,999 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:14,999 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:14,999 from westpa/binning/_assign.c:4: 2021-07-15T16:51:14,999 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:15,000 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:15,000 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:15,020 westpa/binning/_assign.c:26397:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:15,020 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:15,020 | ^ 2021-07-15T16:51:15,020 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:15,020 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:15,020 from westpa/binning/_assign.c:4: 2021-07-15T16:51:15,021 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:15,021 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:15,021 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:15,041 westpa/binning/_assign.c:26397:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:15,041 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:15,041 | ^ 2021-07-15T16:51:15,041 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:15,042 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:15,042 from westpa/binning/_assign.c:4: 2021-07-15T16:51:15,042 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:15,042 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:15,042 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:15,062 westpa/binning/_assign.c:26397:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:15,062 26397 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:15,063 | ^ 2021-07-15T16:51:15,063 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:15,063 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:15,063 from westpa/binning/_assign.c:4: 2021-07-15T16:51:15,063 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:15,063 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:15,063 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:15,211 westpa/binning/_assign.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:51:15,229 westpa/binning/_assign.c:27049:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:15,230 27049 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:51:15,230 | ^~~~~~ 2021-07-15T16:51:15,230 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:15,230 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:15,230 from westpa/binning/_assign.c:4: 2021-07-15T16:51:15,230 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:51:15,230 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:51:15,230 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:32,475 westpa/binning/_assign.c: In function ‘__pyx_pw_6westpa_7binning_7_assign_1rectilinear_assign’: 2021-07-15T16:51:32,477 westpa/binning/_assign.c:3206:159: warning: ‘__pyx_v_index’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:51:32,477 3206 | *((__pyx_t_6westpa_7binning_7_assign_index_t *) ( /* dim=0 */ (__pyx_v_output.data + __pyx_t_30 * __pyx_v_output.strides[0]) )) += (__pyx_v_index * __pyx_v_stridefac); 2021-07-15T16:51:32,478 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:32,479 westpa/binning/_assign.c:2697:45: note: ‘__pyx_v_index’ was declared here 2021-07-15T16:51:32,479 2697 | __pyx_t_6westpa_7binning_7_assign_index_t __pyx_v_index; 2021-07-15T16:51:32,479 | ^~~~~~~~~~~~~ 2021-07-15T16:51:40,806 creating build/lib.linux-armv7l-3.9/westpa/binning 2021-07-15T16:51:40,806 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/binning/_assign.o -o build/lib.linux-armv7l-3.9/westpa/binning/_assign.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:51:41,003 building 'westpa.kinetics._kinetics' extension 2021-07-15T16:51:41,004 creating build/temp.linux-armv7l-3.9/westpa/kinetics 2021-07-15T16:51:41,004 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/kinetics/_kinetics.c -o build/temp.linux-armv7l-3.9/westpa/kinetics/_kinetics.o -O3 2021-07-15T16:51:41,385 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:51:41,386 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:51:41,386 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:51:41,386 from westpa/kinetics/_kinetics.c:598: 2021-07-15T16:51:41,386 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:51:41,386 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:51:41,386 | ^~~~~~~ 2021-07-15T16:51:42,345 westpa/kinetics/_kinetics.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:51:42,361 westpa/kinetics/_kinetics.c:33317:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,362 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,362 | ^ 2021-07-15T16:51:42,362 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,362 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,362 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,362 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:42,363 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:42,363 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,382 westpa/kinetics/_kinetics.c:33317:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,383 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,383 | ^ 2021-07-15T16:51:42,383 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,383 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,383 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,383 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:42,383 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:42,384 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,403 westpa/kinetics/_kinetics.c:33317:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,403 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,403 | ^ 2021-07-15T16:51:42,403 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,403 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,403 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,404 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:42,404 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:42,404 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,423 westpa/kinetics/_kinetics.c:33317:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,423 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,423 | ^ 2021-07-15T16:51:42,424 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,424 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,424 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,424 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:42,424 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:42,424 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,443 westpa/kinetics/_kinetics.c:33317:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,444 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,444 | ^ 2021-07-15T16:51:42,444 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,444 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,444 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,444 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:42,444 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:42,444 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,463 westpa/kinetics/_kinetics.c:33317:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,464 33317 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,464 | ^ 2021-07-15T16:51:42,464 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,464 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,464 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,464 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:42,465 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:42,465 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,488 westpa/kinetics/_kinetics.c:33333:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,488 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,488 | ^ 2021-07-15T16:51:42,488 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,488 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,488 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,489 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:42,489 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:42,489 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,508 westpa/kinetics/_kinetics.c:33333:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,508 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,508 | ^ 2021-07-15T16:51:42,508 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,509 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,509 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,509 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:42,509 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:42,509 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,528 westpa/kinetics/_kinetics.c:33333:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,529 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,529 | ^ 2021-07-15T16:51:42,529 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,529 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,529 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,529 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:42,529 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:42,529 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,549 westpa/kinetics/_kinetics.c:33333:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,549 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,549 | ^ 2021-07-15T16:51:42,549 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,549 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,549 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,549 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:42,550 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:42,550 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,569 westpa/kinetics/_kinetics.c:33333:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,569 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,569 | ^ 2021-07-15T16:51:42,569 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,569 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,570 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,570 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:51:42,570 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:51:42,570 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,589 westpa/kinetics/_kinetics.c:33333:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,589 33333 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:51:42,590 | ^ 2021-07-15T16:51:42,590 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,590 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,590 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,590 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:51:42,590 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:51:42,590 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:51:42,908 westpa/kinetics/_kinetics.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:51:42,926 westpa/kinetics/_kinetics.c:34863:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:51:42,926 34863 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:51:42,926 | ^~~~~~ 2021-07-15T16:51:42,927 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:51:42,927 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:51:42,927 from westpa/kinetics/_kinetics.c:4: 2021-07-15T16:51:42,927 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:51:42,927 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:51:42,927 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:02,963 westpa/kinetics/_kinetics.c: In function ‘__pyx_pw_6westpa_8kinetics_9_kinetics_27find_macrostate_transitions’: 2021-07-15T16:52:02,969 westpa/kinetics/_kinetics.c:9998:106: warning: ‘__pyx_v_tm’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:52:02,970 9998 | *((double *) ( /* dim=0 */ (__pyx_v__last_time.data + __pyx_t_54 * __pyx_v__last_time.strides[0]) )) = __pyx_v_tm; 2021-07-15T16:52:02,970 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2021-07-15T16:52:02,975 westpa/kinetics/_kinetics.c:9501:10: note: ‘__pyx_v_tm’ was declared here 2021-07-15T16:52:02,975 9501 | double __pyx_v_tm; 2021-07-15T16:52:02,976 | ^~~~~~~~~~ 2021-07-15T16:52:10,928 westpa/kinetics/_kinetics.c: In function ‘__pyx_pw_6westpa_8kinetics_9_kinetics_23sequence_macro_flux_to_rate’: 2021-07-15T16:52:10,928 westpa/kinetics/_kinetics.c:1617:79: warning: ‘__pyx_v_iiter’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2021-07-15T16:52:10,929 1617 | __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ 2021-07-15T16:52:10,929 | ^~ 2021-07-15T16:52:10,929 1618 | (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\ 2021-07-15T16:52:10,929 | 2021-07-15T16:52:10,933 westpa/kinetics/_kinetics.c:7507:14: note: ‘__pyx_v_iiter’ was declared here 2021-07-15T16:52:10,933 7507 | Py_ssize_t __pyx_v_iiter; 2021-07-15T16:52:10,933 | ^~~~~~~~~~~~~ 2021-07-15T16:52:18,730 creating build/lib.linux-armv7l-3.9/westpa/kinetics 2021-07-15T16:52:18,730 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/kinetics/_kinetics.o -o build/lib.linux-armv7l-3.9/westpa/kinetics/_kinetics.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:52:18,964 building 'westpa.reweight._reweight' extension 2021-07-15T16:52:18,965 creating build/temp.linux-armv7l-3.9/westpa/reweight 2021-07-15T16:52:18,965 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I. -I/home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c westpa/reweight/_reweight.c -o build/temp.linux-armv7l-3.9/westpa/reweight/_reweight.o -O3 2021-07-15T16:52:19,353 In file included from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1969, 2021-07-15T16:52:19,353 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2021-07-15T16:52:19,354 from /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:4, 2021-07-15T16:52:19,354 from westpa/reweight/_reweight.c:598: 2021-07-15T16:52:19,354 /home/piwheels/.local/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2021-07-15T16:52:19,354 17 | #warning "Using deprecated NumPy API, disable it with " \ 2021-07-15T16:52:19,354 | ^~~~~~~ 2021-07-15T16:52:20,073 westpa/reweight/_reweight.c: In function ‘__Pyx_ParseOptionalKeywords’: 2021-07-15T16:52:20,086 westpa/reweight/_reweight.c:26899:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,086 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,087 | ^ 2021-07-15T16:52:20,087 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,087 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,087 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,087 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:20,087 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:20,087 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,103 westpa/reweight/_reweight.c:26899:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,103 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,103 | ^ 2021-07-15T16:52:20,104 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,104 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,104 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,104 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:52:20,104 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:52:20,104 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,120 westpa/reweight/_reweight.c:26899:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,120 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,120 | ^ 2021-07-15T16:52:20,120 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,120 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,120 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,120 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:20,121 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:20,121 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,136 westpa/reweight/_reweight.c:26899:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,136 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,136 | ^ 2021-07-15T16:52:20,136 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,137 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,137 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,137 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:20,137 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:20,137 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,152 westpa/reweight/_reweight.c:26899:21: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,153 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,153 | ^ 2021-07-15T16:52:20,153 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,153 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,153 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,153 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:52:20,153 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:52:20,153 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,169 westpa/reweight/_reweight.c:26899:21: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,169 26899 | (PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,169 | ^ 2021-07-15T16:52:20,169 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,169 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,170 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,170 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:20,170 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:20,170 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,188 westpa/reweight/_reweight.c:26915:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,188 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,188 | ^ 2021-07-15T16:52:20,189 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,189 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,189 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,189 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:20,189 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:20,189 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,204 westpa/reweight/_reweight.c:26915:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,205 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,205 | ^ 2021-07-15T16:52:20,205 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,205 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,205 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,205 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:52:20,205 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:52:20,206 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,221 westpa/reweight/_reweight.c:26915:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,221 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,221 | ^ 2021-07-15T16:52:20,221 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,221 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,222 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,222 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:20,222 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:20,222 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,237 westpa/reweight/_reweight.c:26915:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,237 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,238 | ^ 2021-07-15T16:52:20,238 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,238 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,238 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,238 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:20,238 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:20,238 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,254 westpa/reweight/_reweight.c:26915:25: warning: ‘PyUnicode_AsUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,254 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,254 | ^ 2021-07-15T16:52:20,254 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,254 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,254 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,254 /usr/include/python3.9/cpython/unicodeobject.h:580:45: note: declared here 2021-07-15T16:52:20,255 580 | Py_DEPRECATED(3.3) PyAPI_FUNC(Py_UNICODE *) PyUnicode_AsUnicode( 2021-07-15T16:52:20,255 | ^~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,270 westpa/reweight/_reweight.c:26915:25: warning: ‘_PyUnicode_get_wstr_length’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,270 26915 | (PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 : 2021-07-15T16:52:20,270 | ^ 2021-07-15T16:52:20,271 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,271 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,271 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,271 /usr/include/python3.9/cpython/unicodeobject.h:446:26: note: declared here 2021-07-15T16:52:20,271 446 | static inline Py_ssize_t _PyUnicode_get_wstr_length(PyObject *op) { 2021-07-15T16:52:20,271 | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:20,461 westpa/reweight/_reweight.c: In function ‘__Pyx_decode_c_string’: 2021-07-15T16:52:20,475 westpa/reweight/_reweight.c:28078:9: warning: ‘PyUnicode_FromUnicode’ is deprecated [-Wdeprecated-declarations] 2021-07-15T16:52:20,475 28078 | return PyUnicode_FromUnicode(NULL, 0); 2021-07-15T16:52:20,475 | ^~~~~~ 2021-07-15T16:52:20,475 In file included from /usr/include/python3.9/unicodeobject.h:1026, 2021-07-15T16:52:20,475 from /usr/include/python3.9/Python.h:97, 2021-07-15T16:52:20,475 from westpa/reweight/_reweight.c:4: 2021-07-15T16:52:20,475 /usr/include/python3.9/cpython/unicodeobject.h:551:42: note: declared here 2021-07-15T16:52:20,476 551 | Py_DEPRECATED(3.3) PyAPI_FUNC(PyObject*) PyUnicode_FromUnicode( 2021-07-15T16:52:20,476 | ^~~~~~~~~~~~~~~~~~~~~ 2021-07-15T16:52:50,017 creating build/lib.linux-armv7l-3.9/westpa/reweight 2021-07-15T16:52:50,018 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-3.9/westpa/reweight/_reweight.o -o build/lib.linux-armv7l-3.9/westpa/reweight/_reweight.cpython-39-arm-linux-gnueabihf.so 2021-07-15T16:52:50,216 running build_scripts 2021-07-15T16:52:50,217 creating build/scripts-3.9 2021-07-15T16:52:50,219 copying westpa/scripts/w_assign.py -> build/scripts-3.9 2021-07-15T16:52:50,223 copying westpa/scripts/w_pdist.py -> build/scripts-3.9 2021-07-15T16:52:50,226 copying westpa/scripts/w_fork.py -> build/scripts-3.9 2021-07-15T16:52:50,228 copying westpa/scripts/w_ipa.py -> build/scripts-3.9 2021-07-15T16:52:50,232 copying westpa/scripts/w_run.py -> build/scripts-3.9 2021-07-15T16:52:50,235 copying westpa/scripts/w_fluxanl.py -> build/scripts-3.9 2021-07-15T16:52:50,238 copying westpa/scripts/w_truncate.py -> build/scripts-3.9 2021-07-15T16:52:50,240 copying westpa/scripts/w_crawl.py -> build/scripts-3.9 2021-07-15T16:52:50,243 copying westpa/scripts/w_bins.py -> build/scripts-3.9 2021-07-15T16:52:50,246 copying westpa/scripts/w_direct.py -> build/scripts-3.9 2021-07-15T16:52:50,249 copying westpa/scripts/w_trace.py -> build/scripts-3.9 2021-07-15T16:52:50,253 copying westpa/scripts/w_reweight.py -> build/scripts-3.9 2021-07-15T16:52:50,256 copying westpa/scripts/w_select.py -> build/scripts-3.9 2021-07-15T16:52:50,259 copying westpa/scripts/w_postanalysis_matrix.py -> build/scripts-3.9 2021-07-15T16:52:50,262 copying westpa/scripts/w_eddist.py -> build/scripts-3.9 2021-07-15T16:52:50,265 copying westpa/scripts/w_kinavg.py -> build/scripts-3.9 2021-07-15T16:52:50,268 copying westpa/scripts/w_ntop.py -> build/scripts-3.9 2021-07-15T16:52:50,271 copying westpa/scripts/w_kinetics.py -> build/scripts-3.9 2021-07-15T16:52:50,273 copying westpa/scripts/w_stateprobs.py -> build/scripts-3.9 2021-07-15T16:52:50,275 copying westpa/scripts/plothist.py -> build/scripts-3.9 2021-07-15T16:52:50,279 copying westpa/scripts/ploterr.py -> build/scripts-3.9 2021-07-15T16:52:50,282 copying westpa/scripts/w_init.py -> build/scripts-3.9 2021-07-15T16:52:50,284 copying westpa/scripts/w_dumpsegs.py -> build/scripts-3.9 2021-07-15T16:52:50,287 copying westpa/scripts/w_postanalysis_reweight.py -> build/scripts-3.9 2021-07-15T16:52:50,289 copying westpa/scripts/w_states.py -> build/scripts-3.9 2021-07-15T16:52:50,292 copying westpa/scripts/w_succ.py -> build/scripts-3.9 2021-07-15T16:52:50,294 changing mode of build/scripts-3.9/w_assign.py from 644 to 755 2021-07-15T16:52:50,294 changing mode of build/scripts-3.9/w_pdist.py from 644 to 755 2021-07-15T16:52:50,294 changing mode of build/scripts-3.9/w_fork.py from 644 to 755 2021-07-15T16:52:50,294 changing mode of build/scripts-3.9/w_ipa.py from 644 to 755 2021-07-15T16:52:50,295 changing mode of build/scripts-3.9/w_run.py from 644 to 755 2021-07-15T16:52:50,295 changing mode of build/scripts-3.9/w_fluxanl.py from 644 to 755 2021-07-15T16:52:50,295 changing mode of build/scripts-3.9/w_truncate.py from 644 to 755 2021-07-15T16:52:50,295 changing mode of build/scripts-3.9/w_crawl.py from 644 to 755 2021-07-15T16:52:50,296 changing mode of build/scripts-3.9/w_bins.py from 644 to 755 2021-07-15T16:52:50,296 changing mode of build/scripts-3.9/w_direct.py from 644 to 755 2021-07-15T16:52:50,296 changing mode of build/scripts-3.9/w_trace.py from 644 to 755 2021-07-15T16:52:50,297 changing mode of build/scripts-3.9/w_reweight.py from 644 to 755 2021-07-15T16:52:50,297 changing mode of build/scripts-3.9/w_select.py from 644 to 755 2021-07-15T16:52:50,297 changing mode of build/scripts-3.9/w_postanalysis_matrix.py from 644 to 755 2021-07-15T16:52:50,297 changing mode of build/scripts-3.9/w_eddist.py from 644 to 755 2021-07-15T16:52:50,298 changing mode of build/scripts-3.9/w_kinavg.py from 644 to 755 2021-07-15T16:52:50,298 changing mode of build/scripts-3.9/w_ntop.py from 644 to 755 2021-07-15T16:52:50,298 changing mode of build/scripts-3.9/w_kinetics.py from 644 to 755 2021-07-15T16:52:50,298 changing mode of build/scripts-3.9/w_stateprobs.py from 644 to 755 2021-07-15T16:52:50,299 changing mode of build/scripts-3.9/plothist.py from 644 to 755 2021-07-15T16:52:50,299 changing mode of build/scripts-3.9/ploterr.py from 644 to 755 2021-07-15T16:52:50,299 changing mode of build/scripts-3.9/w_init.py from 644 to 755 2021-07-15T16:52:50,300 changing mode of build/scripts-3.9/w_dumpsegs.py from 644 to 755 2021-07-15T16:52:50,300 changing mode of build/scripts-3.9/w_postanalysis_reweight.py from 644 to 755 2021-07-15T16:52:50,300 changing mode of build/scripts-3.9/w_states.py from 644 to 755 2021-07-15T16:52:50,300 changing mode of build/scripts-3.9/w_succ.py from 644 to 755 2021-07-15T16:52:50,311 installing to build/bdist.linux-armv7l/wheel 2021-07-15T16:52:50,312 running install 2021-07-15T16:52:50,313 running install_lib 2021-07-15T16:52:50,318 creating build/bdist.linux-armv7l 2021-07-15T16:52:50,318 creating build/bdist.linux-armv7l/wheel 2021-07-15T16:52:50,320 creating build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,321 copying build/lib.linux-armv7l-3.9/westpa/__init__.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,323 copying build/lib.linux-armv7l-3.9/westpa/we_driver.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,326 creating build/bdist.linux-armv7l/wheel/westpa/mclib 2021-07-15T16:52:50,327 copying build/lib.linux-armv7l-3.9/westpa/mclib/_mclib.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/mclib 2021-07-15T16:52:50,359 creating build/bdist.linux-armv7l/wheel/westpa/reweight 2021-07-15T16:52:50,360 copying build/lib.linux-armv7l-3.9/westpa/reweight/_reweight.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/reweight 2021-07-15T16:52:50,391 creating build/bdist.linux-armv7l/wheel/westpa/kinetics 2021-07-15T16:52:50,391 copying build/lib.linux-armv7l-3.9/westpa/kinetics/_kinetics.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/kinetics 2021-07-15T16:52:50,438 copying build/lib.linux-armv7l-3.9/westpa/wm_ops.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,439 copying build/lib.linux-armv7l-3.9/westpa/progress.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,442 copying build/lib.linux-armv7l-3.9/westpa/yamlcfg.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,444 copying build/lib.linux-armv7l-3.9/westpa/extloader.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,446 copying build/lib.linux-armv7l-3.9/westpa/systems.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,448 copying build/lib.linux-armv7l-3.9/westpa/segment.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,450 copying build/lib.linux-armv7l-3.9/westpa/textio.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,453 copying build/lib.linux-armv7l-3.9/westpa/h5io.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,455 copying build/lib.linux-armv7l-3.9/westpa/sim_manager.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,458 copying build/lib.linux-armv7l-3.9/westpa/states.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,461 copying build/lib.linux-armv7l-3.9/westpa/data_manager.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,465 creating build/bdist.linux-armv7l/wheel/westpa/fasthist 2021-07-15T16:52:50,466 copying build/lib.linux-armv7l-3.9/westpa/fasthist/_fasthist.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/fasthist 2021-07-15T16:52:50,508 creating build/bdist.linux-armv7l/wheel/westpa/binning 2021-07-15T16:52:50,509 copying build/lib.linux-armv7l-3.9/westpa/binning/_assign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/binning 2021-07-15T16:52:50,542 copying build/lib.linux-armv7l-3.9/westpa/_rc.py -> build/bdist.linux-armv7l/wheel/westpa 2021-07-15T16:52:50,545 running install_egg_info 2021-07-15T16:52:50,568 running egg_info 2021-07-15T16:52:50,569 writing westpa.egg-info/PKG-INFO 2021-07-15T16:52:50,571 writing dependency_links to westpa.egg-info/dependency_links.txt 2021-07-15T16:52:50,573 writing requirements to westpa.egg-info/requires.txt 2021-07-15T16:52:50,574 writing top-level names to westpa.egg-info/top_level.txt 2021-07-15T16:52:50,615 reading manifest file 'westpa.egg-info/SOURCES.txt' 2021-07-15T16:52:50,635 reading manifest template 'MANIFEST.in' 2021-07-15T16:52:50,819 writing manifest file 'westpa.egg-info/SOURCES.txt' 2021-07-15T16:52:50,821 Copying westpa.egg-info to build/bdist.linux-armv7l/wheel/westpa-0.0.3-py3.9.egg-info 2021-07-15T16:52:50,832 running install_scripts 2021-07-15T16:52:50,899 creating build/bdist.linux-armv7l/wheel/westpa-0.0.3.data 2021-07-15T16:52:50,899 creating build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,900 copying build/scripts-3.9/w_assign.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,903 copying build/scripts-3.9/w_pdist.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,906 copying build/scripts-3.9/w_fork.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,908 copying build/scripts-3.9/w_ipa.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,911 copying build/scripts-3.9/w_run.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,912 copying build/scripts-3.9/w_fluxanl.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,915 copying build/scripts-3.9/w_truncate.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,917 copying build/scripts-3.9/w_crawl.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,919 copying build/scripts-3.9/w_bins.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,922 copying build/scripts-3.9/w_direct.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,924 copying build/scripts-3.9/w_trace.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,927 copying build/scripts-3.9/w_reweight.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,930 copying build/scripts-3.9/w_select.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,932 copying build/scripts-3.9/w_postanalysis_matrix.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,934 copying build/scripts-3.9/w_eddist.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,937 copying build/scripts-3.9/w_kinavg.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,940 copying build/scripts-3.9/w_ntop.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,942 copying build/scripts-3.9/w_kinetics.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,944 copying build/scripts-3.9/w_stateprobs.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,947 copying build/scripts-3.9/plothist.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,950 copying build/scripts-3.9/ploterr.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,952 copying build/scripts-3.9/w_init.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,955 copying build/scripts-3.9/w_dumpsegs.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,957 copying build/scripts-3.9/w_postanalysis_reweight.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,959 copying build/scripts-3.9/w_states.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,961 copying build/scripts-3.9/w_succ.py -> build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts 2021-07-15T16:52:50,963 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_assign.py to 755 2021-07-15T16:52:50,963 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_pdist.py to 755 2021-07-15T16:52:50,964 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_fork.py to 755 2021-07-15T16:52:50,964 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_ipa.py to 755 2021-07-15T16:52:50,964 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_run.py to 755 2021-07-15T16:52:50,964 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_fluxanl.py to 755 2021-07-15T16:52:50,965 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_truncate.py to 755 2021-07-15T16:52:50,965 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_crawl.py to 755 2021-07-15T16:52:50,965 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_bins.py to 755 2021-07-15T16:52:50,965 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_direct.py to 755 2021-07-15T16:52:50,966 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_trace.py to 755 2021-07-15T16:52:50,966 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_reweight.py to 755 2021-07-15T16:52:50,966 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_select.py to 755 2021-07-15T16:52:50,966 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_postanalysis_matrix.py to 755 2021-07-15T16:52:50,967 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_eddist.py to 755 2021-07-15T16:52:50,967 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_kinavg.py to 755 2021-07-15T16:52:50,967 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_ntop.py to 755 2021-07-15T16:52:50,968 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_kinetics.py to 755 2021-07-15T16:52:50,968 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_stateprobs.py to 755 2021-07-15T16:52:50,968 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/plothist.py to 755 2021-07-15T16:52:50,968 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/ploterr.py to 755 2021-07-15T16:52:50,969 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_init.py to 755 2021-07-15T16:52:50,969 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_dumpsegs.py to 755 2021-07-15T16:52:50,969 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_postanalysis_reweight.py to 755 2021-07-15T16:52:50,970 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_states.py to 755 2021-07-15T16:52:50,970 changing mode of build/bdist.linux-armv7l/wheel/westpa-0.0.3.data/scripts/w_succ.py to 755 2021-07-15T16:52:50,994 creating build/bdist.linux-armv7l/wheel/westpa-0.0.3.dist-info/WHEEL 2021-07-15T16:52:50,997 creating '/tmp/pip-wheel-19kgj565/westpa-0.0.3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2021-07-15T16:52:50,999 adding 'westpa/__init__.py' 2021-07-15T16:52:51,002 adding 'westpa/_rc.py' 2021-07-15T16:52:51,011 adding 'westpa/data_manager.py' 2021-07-15T16:52:51,013 adding 'westpa/extloader.py' 2021-07-15T16:52:51,016 adding 'westpa/h5io.py' 2021-07-15T16:52:51,018 adding 'westpa/progress.py' 2021-07-15T16:52:51,019 adding 'westpa/segment.py' 2021-07-15T16:52:51,024 adding 'westpa/sim_manager.py' 2021-07-15T16:52:51,026 adding 'westpa/states.py' 2021-07-15T16:52:51,028 adding 'westpa/systems.py' 2021-07-15T16:52:51,029 adding 'westpa/textio.py' 2021-07-15T16:52:51,034 adding 'westpa/we_driver.py' 2021-07-15T16:52:51,035 adding 'westpa/wm_ops.py' 2021-07-15T16:52:51,037 adding 'westpa/yamlcfg.py' 2021-07-15T16:52:51,323 adding 'westpa/binning/_assign.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:51,618 adding 'westpa/fasthist/_fasthist.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:52,019 adding 'westpa/kinetics/_kinetics.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:52,314 adding 'westpa/mclib/_mclib.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:52,612 adding 'westpa/reweight/_reweight.cpython-39-arm-linux-gnueabihf.so' 2021-07-15T16:52:52,628 adding 'westpa-0.0.3.data/scripts/ploterr.py' 2021-07-15T16:52:52,632 adding 'westpa-0.0.3.data/scripts/plothist.py' 2021-07-15T16:52:52,635 adding 'westpa-0.0.3.data/scripts/w_assign.py' 2021-07-15T16:52:52,637 adding 'westpa-0.0.3.data/scripts/w_bins.py' 2021-07-15T16:52:52,639 adding 'westpa-0.0.3.data/scripts/w_crawl.py' 2021-07-15T16:52:52,641 adding 'westpa-0.0.3.data/scripts/w_direct.py' 2021-07-15T16:52:52,643 adding 'westpa-0.0.3.data/scripts/w_dumpsegs.py' 2021-07-15T16:52:52,646 adding 'westpa-0.0.3.data/scripts/w_eddist.py' 2021-07-15T16:52:52,648 adding 'westpa-0.0.3.data/scripts/w_fluxanl.py' 2021-07-15T16:52:52,650 adding 'westpa-0.0.3.data/scripts/w_fork.py' 2021-07-15T16:52:52,651 adding 'westpa-0.0.3.data/scripts/w_init.py' 2021-07-15T16:52:52,656 adding 'westpa-0.0.3.data/scripts/w_ipa.py' 2021-07-15T16:52:52,658 adding 'westpa-0.0.3.data/scripts/w_kinavg.py' 2021-07-15T16:52:52,659 adding 'westpa-0.0.3.data/scripts/w_kinetics.py' 2021-07-15T16:52:52,661 adding 'westpa-0.0.3.data/scripts/w_ntop.py' 2021-07-15T16:52:52,664 adding 'westpa-0.0.3.data/scripts/w_pdist.py' 2021-07-15T16:52:52,665 adding 'westpa-0.0.3.data/scripts/w_postanalysis_matrix.py' 2021-07-15T16:52:52,667 adding 'westpa-0.0.3.data/scripts/w_postanalysis_reweight.py' 2021-07-15T16:52:52,670 adding 'westpa-0.0.3.data/scripts/w_reweight.py' 2021-07-15T16:52:52,672 adding 'westpa-0.0.3.data/scripts/w_run.py' 2021-07-15T16:52:52,674 adding 'westpa-0.0.3.data/scripts/w_select.py' 2021-07-15T16:52:52,675 adding 'westpa-0.0.3.data/scripts/w_stateprobs.py' 2021-07-15T16:52:52,677 adding 'westpa-0.0.3.data/scripts/w_states.py' 2021-07-15T16:52:52,678 adding 'westpa-0.0.3.data/scripts/w_succ.py' 2021-07-15T16:52:52,682 adding 'westpa-0.0.3.data/scripts/w_trace.py' 2021-07-15T16:52:52,683 adding 'westpa-0.0.3.data/scripts/w_truncate.py' 2021-07-15T16:52:52,685 adding 'westpa-0.0.3.dist-info/METADATA' 2021-07-15T16:52:52,686 adding 'westpa-0.0.3.dist-info/WHEEL' 2021-07-15T16:52:52,687 adding 'westpa-0.0.3.dist-info/top_level.txt' 2021-07-15T16:52:52,688 adding 'westpa-0.0.3.dist-info/RECORD' 2021-07-15T16:52:52,730 removing build/bdist.linux-armv7l/wheel 2021-07-15T16:52:52,873 Building wheel for westpa (setup.py): finished with status 'done' 2021-07-15T16:52:52,914 Created wheel for westpa: filename=westpa-0.0.3-cp39-cp39-linux_armv7l.whl size=2984902 sha256=ab08db8aa33ca1961dfe69ed87059da32ce65f1aa29d6bb022b7cab651f39766 2021-07-15T16:52:52,914 Stored in directory: /tmp/pip-ephem-wheel-cache-rjjgd11x/wheels/28/6f/db/13fea4658299c1cddd333ae0fb28cc2ab30edca5638ea937fb 2021-07-15T16:52:52,925 Successfully built westpa 2021-07-15T16:52:53,041 Removed build tracker: '/tmp/pip-req-tracker-ovk9go92'