2021-07-16T02:54:56,989 Created temporary directory: /tmp/pip-ephem-wheel-cache-34anmokd
2021-07-16T02:54:56,991 Created temporary directory: /tmp/pip-req-tracker-h4ssvz__
2021-07-16T02:54:56,992 Initialized build tracking at /tmp/pip-req-tracker-h4ssvz__
2021-07-16T02:54:56,992 Created build tracker: /tmp/pip-req-tracker-h4ssvz__
2021-07-16T02:54:56,992 Entered build tracker: /tmp/pip-req-tracker-h4ssvz__
2021-07-16T02:54:56,993 Created temporary directory: /tmp/pip-wheel-45lzpay3
2021-07-16T02:54:57,019 1 location(s) to search for versions of clustalo:
2021-07-16T02:54:57,019 * https://pypi.org/simple/clustalo/
2021-07-16T02:54:57,020 Fetching project page and analyzing links: https://pypi.org/simple/clustalo/
2021-07-16T02:54:57,020 Getting page https://pypi.org/simple/clustalo/
2021-07-16T02:54:57,022 Found index url https://pypi.org/simple
2021-07-16T02:54:57,185   Found link https://files.pythonhosted.org/packages/e4/ec/57f58e09521cd16cf676c99dc959c4d0d58ed38e966b6dd743a9499cdbf2/clustalo-0.1.macosx-10.9-x86_64.tar.gz#sha256=0e76e1de98a820c21d954d302e6a53d30b5e417d2a182b230044662d1f7f749f (from https://pypi.org/simple/clustalo/), version: 0.1.macosx-10.9-x86_64
2021-07-16T02:54:57,185   Found link https://files.pythonhosted.org/packages/ef/32/5414c43fb3d011a28ee337f7bf201c8fe8b01b2605af7bf9fe6ff32fa84d/clustalo-0.1.tar.gz#sha256=24ace8f7a8eeefca8141fb92c513924e8138207d2d5226e287c4d94b38a27716 (from https://pypi.org/simple/clustalo/), version: 0.1
2021-07-16T02:54:57,185   Found link https://files.pythonhosted.org/packages/33/5b/491d3340dece281bd6d62f617e12a688fee7d26ab45a48de9909cec18b08/clustalo-0.1.1.macosx-10.9-x86_64.tar.gz#sha256=87dc8d80e2e090429f30b096fe0af187a227c26206734b0e39eea2fbf84fc217 (from https://pypi.org/simple/clustalo/), version: 0.1.1.macosx-10.9-x86_64
2021-07-16T02:54:57,186   Found link https://files.pythonhosted.org/packages/88/f6/05689339186b64b7e7671ceac15c73a6e3846f4749077f8eeb29d3df09ff/clustalo-0.1.1.tar.gz#sha256=f67429881c29c7bcb52e0cc6269c82a2e30d1d03e33d0fad843d94380e17c517 (from https://pypi.org/simple/clustalo/), version: 0.1.1
2021-07-16T02:54:57,203   Skipping link: none of the wheel's tags (cp27-cp27m-macosx_10_15_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/e2/6a/f6ef84019b667b10bee110f38587ce893ac3c5ad5a9085e7f7698610170c/clustalo-0.1.2-cp27-cp27m-macosx_10_15_x86_64.whl#sha256=1fdbb98f114cadb0ff9176d84c58b23265051ef5c75b8774f0c38d5423dfed15 (from https://pypi.org/simple/clustalo/)
2021-07-16T02:54:57,203   Skipping link: none of the wheel's tags (cp37-cp37m-macosx_10_15_x86_64) are compatible (run pip debug --verbose to show compatible tags): https://files.pythonhosted.org/packages/66/9e/a0d812ee95b4452bfaaf6ee578c325def6ca35b976527ca9ecd1b86989b6/clustalo-0.1.2-cp37-cp37m-macosx_10_15_x86_64.whl#sha256=fc8605b8d61add70bf9aebc6aa6c39f3a532931e9a391682d1e484645d52ff4c (from https://pypi.org/simple/clustalo/)
2021-07-16T02:54:57,203   Found link https://files.pythonhosted.org/packages/13/57/043f6a470fc22c15d1d1ec1e89c11123a5dc61af9aa04ff16f9e9747a1cc/clustalo-0.1.2.tar.gz#sha256=0024930f8ed7479b758689f37c94f10d3256f6392692f92c928fab2f87321be2 (from https://pypi.org/simple/clustalo/), version: 0.1.2
2021-07-16T02:54:57,204 Skipping link: not a file: https://pypi.org/simple/clustalo/
2021-07-16T02:54:57,205 Given no hashes to check 1 links for project 'clustalo': discarding no candidates
2021-07-16T02:54:57,224 Collecting clustalo==0.1.2
2021-07-16T02:54:57,226   Created temporary directory: /tmp/pip-unpack-stwlm3jm
2021-07-16T02:54:57,393   Downloading clustalo-0.1.2.tar.gz (3.6 kB)
2021-07-16T02:54:57,418   Added clustalo==0.1.2 from https://files.pythonhosted.org/packages/13/57/043f6a470fc22c15d1d1ec1e89c11123a5dc61af9aa04ff16f9e9747a1cc/clustalo-0.1.2.tar.gz#sha256=0024930f8ed7479b758689f37c94f10d3256f6392692f92c928fab2f87321be2 to build tracker '/tmp/pip-req-tracker-h4ssvz__'
2021-07-16T02:54:57,419     Running setup.py (path:/tmp/pip-wheel-45lzpay3/clustalo_4dc0fda192ba45f09cdc211be436e68d/setup.py) egg_info for package clustalo
2021-07-16T02:54:57,420     Created temporary directory: /tmp/pip-pip-egg-info-9xdkgtt4
2021-07-16T02:54:57,420     Running command python setup.py egg_info
2021-07-16T02:54:58,372     running egg_info
2021-07-16T02:54:58,374     creating /tmp/pip-pip-egg-info-9xdkgtt4/clustalo.egg-info
2021-07-16T02:54:58,375     writing /tmp/pip-pip-egg-info-9xdkgtt4/clustalo.egg-info/PKG-INFO
2021-07-16T02:54:58,377     writing dependency_links to /tmp/pip-pip-egg-info-9xdkgtt4/clustalo.egg-info/dependency_links.txt
2021-07-16T02:54:58,380     writing top-level names to /tmp/pip-pip-egg-info-9xdkgtt4/clustalo.egg-info/top_level.txt
2021-07-16T02:54:58,381     writing manifest file '/tmp/pip-pip-egg-info-9xdkgtt4/clustalo.egg-info/SOURCES.txt'
2021-07-16T02:54:58,576     reading manifest file '/tmp/pip-pip-egg-info-9xdkgtt4/clustalo.egg-info/SOURCES.txt'
2021-07-16T02:54:58,578     reading manifest template 'MANIFEST.in'
2021-07-16T02:54:58,581     writing manifest file '/tmp/pip-pip-egg-info-9xdkgtt4/clustalo.egg-info/SOURCES.txt'
2021-07-16T02:54:58,658   Source in /tmp/pip-wheel-45lzpay3/clustalo_4dc0fda192ba45f09cdc211be436e68d has version 0.1.2, which satisfies requirement clustalo==0.1.2 from https://files.pythonhosted.org/packages/13/57/043f6a470fc22c15d1d1ec1e89c11123a5dc61af9aa04ff16f9e9747a1cc/clustalo-0.1.2.tar.gz#sha256=0024930f8ed7479b758689f37c94f10d3256f6392692f92c928fab2f87321be2
2021-07-16T02:54:58,659   Removed clustalo==0.1.2 from https://files.pythonhosted.org/packages/13/57/043f6a470fc22c15d1d1ec1e89c11123a5dc61af9aa04ff16f9e9747a1cc/clustalo-0.1.2.tar.gz#sha256=0024930f8ed7479b758689f37c94f10d3256f6392692f92c928fab2f87321be2 from build tracker '/tmp/pip-req-tracker-h4ssvz__'
2021-07-16T02:54:58,663 Created temporary directory: /tmp/pip-unpack-gnz2_ks8
2021-07-16T02:54:58,663 Building wheels for collected packages: clustalo
2021-07-16T02:54:58,667   Created temporary directory: /tmp/pip-wheel-z0jw4flr
2021-07-16T02:54:58,668   Building wheel for clustalo (setup.py): started
2021-07-16T02:54:58,668   Destination directory: /tmp/pip-wheel-z0jw4flr
2021-07-16T02:54:58,668   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-45lzpay3/clustalo_4dc0fda192ba45f09cdc211be436e68d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-45lzpay3/clustalo_4dc0fda192ba45f09cdc211be436e68d/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-z0jw4flr
2021-07-16T02:55:00,402   running bdist_wheel
2021-07-16T02:55:00,559   running build
2021-07-16T02:55:00,559   running build_ext
2021-07-16T02:55:00,564   building 'clustalo' extension
2021-07-16T02:55:00,564   creating build
2021-07-16T02:55:00,565   creating build/temp.linux-armv7l-3.9
2021-07-16T02:55:00,565   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/clustalo -I/usr/local/include/clustalo -I/usr/include/python3.9 -c clustalo.c -o build/temp.linux-armv7l-3.9/clustalo.o -fopenmp
2021-07-16T02:55:00,919   clustalo.c:2:10: fatal error: clustal-omega.h: No such file or directory
2021-07-16T02:55:00,919       2 | #include <clustal-omega.h>
2021-07-16T02:55:00,919         |          ^~~~~~~~~~~~~~~~~
2021-07-16T02:55:00,919   compilation terminated.
2021-07-16T02:55:00,924   error: command '/usr/bin/arm-linux-gnueabihf-gcc' failed with exit code 1
2021-07-16T02:55:00,999   Building wheel for clustalo (setup.py): finished with status 'error'
2021-07-16T02:55:00,999   ERROR: Failed building wheel for clustalo
2021-07-16T02:55:01,000   Running setup.py clean for clustalo
2021-07-16T02:55:01,000   Running command /usr/bin/python3 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-45lzpay3/clustalo_4dc0fda192ba45f09cdc211be436e68d/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-45lzpay3/clustalo_4dc0fda192ba45f09cdc211be436e68d/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
2021-07-16T02:55:02,041   running clean
2021-07-16T02:55:02,043   removing 'build/temp.linux-armv7l-3.9' (and everything under it)
2021-07-16T02:55:02,044   'build/lib.linux-armv7l-3.9' does not exist -- can't clean it
2021-07-16T02:55:02,045   'build/bdist.linux-armv7l' does not exist -- can't clean it
2021-07-16T02:55:02,045   'build/scripts-3.9' does not exist -- can't clean it
2021-07-16T02:55:02,045   removing 'build'
2021-07-16T02:55:02,100 Failed to build clustalo
2021-07-16T02:55:02,100 ERROR: Failed to build one or more wheels
2021-07-16T02:55:02,101 Exception information:
2021-07-16T02:55:02,101 Traceback (most recent call last):
2021-07-16T02:55:02,101   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/base_command.py", line 180, in _main
2021-07-16T02:55:02,101     status = self.run(options, args)
2021-07-16T02:55:02,101   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/cli/req_command.py", line 205, in wrapper
2021-07-16T02:55:02,101     return func(self, options, args)
2021-07-16T02:55:02,101   File "/home/piwheels/.local/lib/python3.9/site-packages/pip/_internal/commands/wheel.py", line 174, in run
2021-07-16T02:55:02,101     raise CommandError(
2021-07-16T02:55:02,101 pip._internal.exceptions.CommandError: Failed to build one or more wheels
2021-07-16T02:55:02,104 Removed build tracker: '/tmp/pip-req-tracker-h4ssvz__'