2021-08-13T07:45:12,858 Created temporary directory: /tmp/pip-ephem-wheel-cache-q27gzid2 2021-08-13T07:45:12,864 Created temporary directory: /tmp/pip-req-tracker-3asojndk 2021-08-13T07:45:12,865 Initialized build tracking at /tmp/pip-req-tracker-3asojndk 2021-08-13T07:45:12,865 Created build tracker: /tmp/pip-req-tracker-3asojndk 2021-08-13T07:45:12,866 Entered build tracker: /tmp/pip-req-tracker-3asojndk 2021-08-13T07:45:12,867 Created temporary directory: /tmp/pip-wheel-9zf1qp6l 2021-08-13T07:45:12,935 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2021-08-13T07:45:12,939 2 location(s) to search for versions of genomon-sv: 2021-08-13T07:45:12,939 * https://pypi.org/simple/genomon-sv/ 2021-08-13T07:45:12,939 * https://www.piwheels.org/simple/genomon-sv/ 2021-08-13T07:45:12,939 Fetching project page and analyzing links: https://pypi.org/simple/genomon-sv/ 2021-08-13T07:45:12,942 Getting page https://pypi.org/simple/genomon-sv/ 2021-08-13T07:45:12,946 Found index url https://pypi.org/simple 2021-08-13T07:45:13,288 Found link https://files.pythonhosted.org/packages/4a/e1/ebe46f558dcc53e5c422ab2dd7b64c58aee41cb7e0ee7a6cd46a6f9be338/genomon_sv-0.5.0.tar.gz#sha256=1afdf090c16daa7c52f04f99a4e5cf5decf504364249d72ae5a2076e854a250f (from https://pypi.org/simple/genomon-sv/), version: 0.5.0 2021-08-13T07:45:13,289 Found link https://files.pythonhosted.org/packages/1e/6e/ce197fc61297dd00404aaca5c5bc04545b7b1754f9ff54ca9d4cadc1540a/genomon_sv-0.5.1.tar.gz#sha256=0ea5d7b26f6baf7fd5ad515035fa913ef02bdc412442ca8f9895f276cf02c6ba (from https://pypi.org/simple/genomon-sv/), version: 0.5.1 2021-08-13T07:45:13,290 Found link https://files.pythonhosted.org/packages/1d/48/7572fad347c747dbd40638d33484fa8959cda4f236be2cf1be51caff1674/genomon_sv-0.6.0rc1.tar.gz#sha256=b826812d9b6a94149f64285f32a909bd1149ddb85bef0e7a80168b7cda836128 (from https://pypi.org/simple/genomon-sv/), version: 0.6.0rc1 2021-08-13T07:45:13,291 Found link https://files.pythonhosted.org/packages/c3/11/fea9bfc568329cc8120b035ca17e321de8b4372875caa4456af3f0116e11/genomon_sv-0.6.0.tar.gz#sha256=0d02888d923f2b2bd07aaae941d3874e5cdf68d4d699e3b9247fe94cd0e84992 (from https://pypi.org/simple/genomon-sv/), version: 0.6.0 2021-08-13T07:45:13,292 Found link https://files.pythonhosted.org/packages/96/50/4bb65fbaafbe426bbd8d5259aad58b888a8522a8be8597dba7261e8b1453/genomon_sv-0.7.0.tar.gz#sha256=d4f45e30ff56ca4cd6ee2f7e836abab5e397e334f5e04f7f704d5aa1d382a4b7 (from https://pypi.org/simple/genomon-sv/), version: 0.7.0 2021-08-13T07:45:13,293 Found link https://files.pythonhosted.org/packages/9b/9e/1db5eeab076d1e749ef6c3652d011123d0025ae343f232eda2c89e275c6a/genomon_sv-0.7.1.tar.gz#sha256=fd1a122064b7dd1e730f5d7c7d0595365f4482a68324b8981ab80e6c7f42468e (from https://pypi.org/simple/genomon-sv/), version: 0.7.1 2021-08-13T07:45:13,294 Found link https://files.pythonhosted.org/packages/36/17/8d64de29c2f158d3efa7fa346f94339bc72fad02684100cc8c840b716324/genomon_sv-0.7.2.tar.gz#sha256=179c717417a7d7c41bdc18916f8dc24aa1fa4d6a0d70a0080320c718725def15 (from https://pypi.org/simple/genomon-sv/), version: 0.7.2 2021-08-13T07:45:13,295 Skipping link: No binaries permitted for genomon-sv: https://files.pythonhosted.org/packages/05/cf/919c58c0f2335aa76efd01d06d6d103480f8f2e3f93ea32b21b76d4179b9/genomon_sv-0.8.0-py3-none-any.whl#sha256=c2c30d7c97e1699d356420f18040ede194585d29f5bfb3299c88baf901281444 (from https://pypi.org/simple/genomon-sv/) 2021-08-13T07:45:13,295 Found link https://files.pythonhosted.org/packages/f7/1c/af866ed9563e0af17e41f3ad481fefc750a46ea6b1aac1b733c8f1c3d9e0/genomon_sv-0.8.0.tar.gz#sha256=8c84ea08b955c37c91fbd6cb7a6f3f857ceddaac43c7a9d78c284ba52569bc21 (from https://pypi.org/simple/genomon-sv/), version: 0.8.0 2021-08-13T07:45:13,296 Skipping link: No binaries permitted for genomon-sv: https://files.pythonhosted.org/packages/68/a6/013ee940312c2d1d873b85888ab2202743d6f20eef2938d80488358d6820/genomon_sv-0.8.1-py3-none-any.whl#sha256=e1f985debb596111fd00ae9c28ca10f20f5f263a9671ded819f6de1160437e5a (from https://pypi.org/simple/genomon-sv/) 2021-08-13T07:45:13,297 Found link https://files.pythonhosted.org/packages/bc/20/80bf727415214947e57a8171a8ef4c8fdf5157984202612a1919dfd77637/genomon_sv-0.8.1.tar.gz#sha256=968ee798c2296a66fda5a31f0eadb379478d31f3a040ec8e74dca2181450c0fa (from https://pypi.org/simple/genomon-sv/), version: 0.8.1 2021-08-13T07:45:13,297 Fetching project page and analyzing links: https://www.piwheels.org/simple/genomon-sv/ 2021-08-13T07:45:13,298 Getting page https://www.piwheels.org/simple/genomon-sv/ 2021-08-13T07:45:13,301 Found index url https://www.piwheels.org/simple 2021-08-13T07:45:13,480 Skipping link: No binaries permitted for genomon-sv: https://www.piwheels.org/simple/genomon-sv/genomon_sv-0.5.0-py3-none-any.whl#sha256=7636b467ac94d6255118196a240df02cac59802ea28b969d5c451895aec985e6 (from https://www.piwheels.org/simple/genomon-sv/) 2021-08-13T07:45:13,481 Skipping link: No binaries permitted for genomon-sv: https://www.piwheels.org/simple/genomon-sv/genomon_sv-0.5.1-py3-none-any.whl#sha256=554e5872800ac82483248c85357b78f64c4d190e909dfac3fb62a7605f34155a (from https://www.piwheels.org/simple/genomon-sv/) 2021-08-13T07:45:13,482 Skipping link: No binaries permitted for genomon-sv: https://www.piwheels.org/simple/genomon-sv/genomon_sv-0.6.0-py3-none-any.whl#sha256=93560b67871f0f17304519bd091e4301f7fdb6919ec202464298f9e01e5ade4f (from https://www.piwheels.org/simple/genomon-sv/) 2021-08-13T07:45:13,482 Skipping link: No binaries permitted for genomon-sv: https://www.piwheels.org/simple/genomon-sv/genomon_sv-0.6.0rc1-py3-none-any.whl#sha256=a785ed1868f1e74cf35fc9d9c1ae5cbc2659b1b79e7118a6d7ac902deb05fc85 (from https://www.piwheels.org/simple/genomon-sv/) 2021-08-13T07:45:13,483 Skipping link: No binaries permitted for genomon-sv: https://www.piwheels.org/simple/genomon-sv/genomon_sv-0.7.0-py3-none-any.whl#sha256=f37650a17384cfed6045f6c7b8e04c84b10b96e6c3cbe836ebfb08fd91ef09c1 (from https://www.piwheels.org/simple/genomon-sv/) 2021-08-13T07:45:13,484 Skipping link: No binaries permitted for genomon-sv: https://www.piwheels.org/simple/genomon-sv/genomon_sv-0.7.1-py3-none-any.whl#sha256=7579b6e547fd7e7ceb1ef3fe8cdcd86e801e54927a892998d5f20dec24a5c2cb (from https://www.piwheels.org/simple/genomon-sv/) 2021-08-13T07:45:13,484 Skipping link: No binaries permitted for genomon-sv: https://www.piwheels.org/simple/genomon-sv/genomon_sv-0.7.2-py3-none-any.whl#sha256=31266c7304d1863ab692bcf4d91acf08ba1fda1985765d2ccc3d666c3d9f1b7e (from https://www.piwheels.org/simple/genomon-sv/) 2021-08-13T07:45:13,485 Skipping link: No binaries permitted for genomon-sv: https://www.piwheels.org/simple/genomon-sv/genomon_sv-0.8.0-py3-none-any.whl#sha256=c2c30d7c97e1699d356420f18040ede194585d29f5bfb3299c88baf901281444 (from https://www.piwheels.org/simple/genomon-sv/) 2021-08-13T07:45:13,515 Given no hashes to check 1 links for project 'genomon-sv': discarding no candidates 2021-08-13T07:45:13,545 Collecting genomon-sv==0.8.1 2021-08-13T07:45:13,549 Created temporary directory: /tmp/pip-unpack-puvypeb2 2021-08-13T07:45:13,766 Downloading genomon_sv-0.8.1.tar.gz (40 kB) 2021-08-13T07:45:13,924 Added genomon-sv==0.8.1 from https://files.pythonhosted.org/packages/bc/20/80bf727415214947e57a8171a8ef4c8fdf5157984202612a1919dfd77637/genomon_sv-0.8.1.tar.gz#sha256=968ee798c2296a66fda5a31f0eadb379478d31f3a040ec8e74dca2181450c0fa to build tracker '/tmp/pip-req-tracker-3asojndk' 2021-08-13T07:45:13,926 Running setup.py (path:/tmp/pip-wheel-9zf1qp6l/genomon-sv_a4d47fb9208245fa8edd4f22cbd27cf7/setup.py) egg_info for package genomon-sv 2021-08-13T07:45:13,928 Created temporary directory: /tmp/pip-pip-egg-info-k7gwg4r3 2021-08-13T07:45:13,929 Running command python setup.py egg_info 2021-08-13T07:45:15,784 running egg_info 2021-08-13T07:45:15,790 creating /tmp/pip-pip-egg-info-k7gwg4r3/genomon_sv.egg-info 2021-08-13T07:45:15,792 writing dependency_links to /tmp/pip-pip-egg-info-k7gwg4r3/genomon_sv.egg-info/dependency_links.txt 2021-08-13T07:45:15,794 writing /tmp/pip-pip-egg-info-k7gwg4r3/genomon_sv.egg-info/PKG-INFO 2021-08-13T07:45:15,798 writing top-level names to /tmp/pip-pip-egg-info-k7gwg4r3/genomon_sv.egg-info/top_level.txt 2021-08-13T07:45:15,800 writing entry points to /tmp/pip-pip-egg-info-k7gwg4r3/genomon_sv.egg-info/entry_points.txt 2021-08-13T07:45:15,806 writing manifest file '/tmp/pip-pip-egg-info-k7gwg4r3/genomon_sv.egg-info/SOURCES.txt' 2021-08-13T07:45:16,169 reading manifest file '/tmp/pip-pip-egg-info-k7gwg4r3/genomon_sv.egg-info/SOURCES.txt' 2021-08-13T07:45:16,177 writing manifest file '/tmp/pip-pip-egg-info-k7gwg4r3/genomon_sv.egg-info/SOURCES.txt' 2021-08-13T07:45:16,308 Source in /tmp/pip-wheel-9zf1qp6l/genomon-sv_a4d47fb9208245fa8edd4f22cbd27cf7 has version 0.8.1, which satisfies requirement genomon-sv==0.8.1 from https://files.pythonhosted.org/packages/bc/20/80bf727415214947e57a8171a8ef4c8fdf5157984202612a1919dfd77637/genomon_sv-0.8.1.tar.gz#sha256=968ee798c2296a66fda5a31f0eadb379478d31f3a040ec8e74dca2181450c0fa 2021-08-13T07:45:16,310 Removed genomon-sv==0.8.1 from https://files.pythonhosted.org/packages/bc/20/80bf727415214947e57a8171a8ef4c8fdf5157984202612a1919dfd77637/genomon_sv-0.8.1.tar.gz#sha256=968ee798c2296a66fda5a31f0eadb379478d31f3a040ec8e74dca2181450c0fa from build tracker '/tmp/pip-req-tracker-3asojndk' 2021-08-13T07:45:16,318 Created temporary directory: /tmp/pip-unpack-8ig53byq 2021-08-13T07:45:16,319 Building wheels for collected packages: genomon-sv 2021-08-13T07:45:16,328 Created temporary directory: /tmp/pip-wheel-hwc3qtih 2021-08-13T07:45:16,329 Building wheel for genomon-sv (setup.py): started 2021-08-13T07:45:16,330 Destination directory: /tmp/pip-wheel-hwc3qtih 2021-08-13T07:45:16,331 Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-9zf1qp6l/genomon-sv_a4d47fb9208245fa8edd4f22cbd27cf7/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-9zf1qp6l/genomon-sv_a4d47fb9208245fa8edd4f22cbd27cf7/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hwc3qtih 2021-08-13T07:45:18,174 running bdist_wheel 2021-08-13T07:45:18,188 running build 2021-08-13T07:45:18,189 running build_py 2021-08-13T07:45:18,529 creating build 2021-08-13T07:45:18,530 creating build/lib 2021-08-13T07:45:18,532 creating build/lib/genomon_sv 2021-08-13T07:45:18,535 copying genomon_sv/mergeFunction.py -> build/lib/genomon_sv 2021-08-13T07:45:18,540 copying genomon_sv/utils.py -> build/lib/genomon_sv 2021-08-13T07:45:18,545 copying genomon_sv/filterFunction.py -> build/lib/genomon_sv 2021-08-13T07:45:18,552 copying genomon_sv/realignmentFunction.py -> build/lib/genomon_sv 2021-08-13T07:45:18,558 copying genomon_sv/__init__.py -> build/lib/genomon_sv 2021-08-13T07:45:18,563 copying genomon_sv/annotationFunction.py -> build/lib/genomon_sv 2021-08-13T07:45:18,570 copying genomon_sv/coveredRegions.py -> build/lib/genomon_sv 2021-08-13T07:45:18,576 copying genomon_sv/run.py -> build/lib/genomon_sv 2021-08-13T07:45:18,583 copying genomon_sv/edlibFunction.py -> build/lib/genomon_sv 2021-08-13T07:45:18,589 copying genomon_sv/parseFunction.py -> build/lib/genomon_sv 2021-08-13T07:45:18,597 copying genomon_sv/arg_parser.py -> build/lib/genomon_sv 2021-08-13T07:45:18,612 installing to build/bdist.linux-armv7l/wheel 2021-08-13T07:45:18,612 running install 2021-08-13T07:45:18,616 running install_lib 2021-08-13T07:45:18,625 creating build/bdist.linux-armv7l 2021-08-13T07:45:18,626 creating build/bdist.linux-armv7l/wheel 2021-08-13T07:45:18,631 creating build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,634 copying build/lib/genomon_sv/mergeFunction.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,640 copying build/lib/genomon_sv/utils.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,645 copying build/lib/genomon_sv/filterFunction.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,653 copying build/lib/genomon_sv/realignmentFunction.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,660 copying build/lib/genomon_sv/__init__.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,665 copying build/lib/genomon_sv/annotationFunction.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,671 copying build/lib/genomon_sv/coveredRegions.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,676 copying build/lib/genomon_sv/run.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,683 copying build/lib/genomon_sv/edlibFunction.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,689 copying build/lib/genomon_sv/parseFunction.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,697 copying build/lib/genomon_sv/arg_parser.py -> build/bdist.linux-armv7l/wheel/genomon_sv 2021-08-13T07:45:18,704 running install_egg_info 2021-08-13T07:45:18,757 running egg_info 2021-08-13T07:45:18,759 writing genomon_sv.egg-info/PKG-INFO 2021-08-13T07:45:18,763 writing dependency_links to genomon_sv.egg-info/dependency_links.txt 2021-08-13T07:45:18,766 writing entry points to genomon_sv.egg-info/entry_points.txt 2021-08-13T07:45:18,769 writing top-level names to genomon_sv.egg-info/top_level.txt 2021-08-13T07:45:18,778 reading manifest file 'genomon_sv.egg-info/SOURCES.txt' 2021-08-13T07:45:18,788 writing manifest file 'genomon_sv.egg-info/SOURCES.txt' 2021-08-13T07:45:18,791 Copying genomon_sv.egg-info to build/bdist.linux-armv7l/wheel/genomon_sv-0.8.1-py3.5.egg-info 2021-08-13T07:45:23,863 running install_scripts 2021-08-13T07:45:24,048 creating build/bdist.linux-armv7l/wheel/genomon_sv-0.8.1.dist-info/WHEEL 2021-08-13T07:45:24,294 Building wheel for genomon-sv (setup.py): finished with status 'done' 2021-08-13T07:45:24,298 Created wheel for genomon-sv: filename=genomon_sv-0.8.1-py3-none-any.whl size=31298 sha256=4dca3c37c87eb2fd32e5196d6e53203b41172e08b8c0022484395e5a9f71721f 2021-08-13T07:45:24,299 Stored in directory: /tmp/pip-ephem-wheel-cache-q27gzid2/wheels/e7/bb/fd/c889694a0d95b48a9bacac5720253cf6b14637dd3d58f9cfc4 2021-08-13T07:45:24,317 Successfully built genomon-sv 2021-08-13T07:45:24,327 Removed build tracker: '/tmp/pip-req-tracker-3asojndk'