2022-04-27T07:22:21,427 Created temporary directory: /tmp/pip-ephem-wheel-cache-ak06w8qg
2022-04-27T07:22:21,433 Created temporary directory: /tmp/pip-req-tracker-4jd3wrbu
2022-04-27T07:22:21,434 Initialized build tracking at /tmp/pip-req-tracker-4jd3wrbu
2022-04-27T07:22:21,435 Created build tracker: /tmp/pip-req-tracker-4jd3wrbu
2022-04-27T07:22:21,435 Entered build tracker: /tmp/pip-req-tracker-4jd3wrbu
2022-04-27T07:22:21,436 Created temporary directory: /tmp/pip-wheel-4u8hz915
2022-04-27T07:22:21,507 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-04-27T07:22:21,511 2 location(s) to search for versions of phased-methylation:
2022-04-27T07:22:21,511 * https://pypi.org/simple/phased-methylation/
2022-04-27T07:22:21,511 * https://www.piwheels.org/simple/phased-methylation/
2022-04-27T07:22:21,512 Fetching project page and analyzing links: https://pypi.org/simple/phased-methylation/
2022-04-27T07:22:21,514 Getting page https://pypi.org/simple/phased-methylation/
2022-04-27T07:22:21,518 Found index url https://pypi.org/simple
2022-04-27T07:22:21,830   Skipping link: No binaries permitted for phased-methylation: https://files.pythonhosted.org/packages/ab/35/5da5df4f58cc8019ed6d3a53a8fbfcd22b6e55defbe04496766abcf021d7/phased_methylation-0.17.3-py3-none-any.whl#sha256=d01ff9b7e22f07a64801e50226d22a17e8be5dba92b99d1d08ad44cbae876136 (from https://pypi.org/simple/phased-methylation/)
2022-04-27T07:22:21,831   Found link https://files.pythonhosted.org/packages/89/a1/6587c50d7fe4a45e8cf30550c2fb41d6143e35205969e914d61cfee30646/phased_methylation-0.17.3.tar.gz#sha256=d8e71136bcab8d6c3eed6e8a2d3cb0e61ceee8fd567c6a0de6d1549ad9146fd9 (from https://pypi.org/simple/phased-methylation/), version: 0.17.3
2022-04-27T07:22:21,832 Fetching project page and analyzing links: https://www.piwheels.org/simple/phased-methylation/
2022-04-27T07:22:21,833 Getting page https://www.piwheels.org/simple/phased-methylation/
2022-04-27T07:22:21,835 Found index url https://www.piwheels.org/simple
2022-04-27T07:22:22,080 Given no hashes to check 1 links for project 'phased-methylation': discarding no candidates
2022-04-27T07:22:22,113 Collecting phased-methylation==0.17.3
2022-04-27T07:22:22,116   Created temporary directory: /tmp/pip-unpack-xyk0xuas
2022-04-27T07:22:24,195   Downloading phased_methylation-0.17.3.tar.gz (19.0 MB)
2022-04-27T07:22:32,414   Added phased-methylation==0.17.3 from https://files.pythonhosted.org/packages/89/a1/6587c50d7fe4a45e8cf30550c2fb41d6143e35205969e914d61cfee30646/phased_methylation-0.17.3.tar.gz#sha256=d8e71136bcab8d6c3eed6e8a2d3cb0e61ceee8fd567c6a0de6d1549ad9146fd9 to build tracker '/tmp/pip-req-tracker-4jd3wrbu'
2022-04-27T07:22:32,417     Running setup.py (path:/tmp/pip-wheel-4u8hz915/phased-methylation_ba585e7305ce49a0809f6fbe11ec85c0/setup.py) egg_info for package phased-methylation
2022-04-27T07:22:32,418     Created temporary directory: /tmp/pip-pip-egg-info-_8dmonzw
2022-04-27T07:22:32,419     Running command python setup.py egg_info
2022-04-27T07:22:34,564     running egg_info
2022-04-27T07:22:34,570     creating /tmp/pip-pip-egg-info-_8dmonzw/phased_methylation.egg-info
2022-04-27T07:22:34,572     writing entry points to /tmp/pip-pip-egg-info-_8dmonzw/phased_methylation.egg-info/entry_points.txt
2022-04-27T07:22:34,576     writing top-level names to /tmp/pip-pip-egg-info-_8dmonzw/phased_methylation.egg-info/top_level.txt
2022-04-27T07:22:34,579     writing dependency_links to /tmp/pip-pip-egg-info-_8dmonzw/phased_methylation.egg-info/dependency_links.txt
2022-04-27T07:22:34,581     writing requirements to /tmp/pip-pip-egg-info-_8dmonzw/phased_methylation.egg-info/requires.txt
2022-04-27T07:22:34,583     writing /tmp/pip-pip-egg-info-_8dmonzw/phased_methylation.egg-info/PKG-INFO
2022-04-27T07:22:34,589     writing manifest file '/tmp/pip-pip-egg-info-_8dmonzw/phased_methylation.egg-info/SOURCES.txt'
2022-04-27T07:22:34,957     reading manifest file '/tmp/pip-pip-egg-info-_8dmonzw/phased_methylation.egg-info/SOURCES.txt'
2022-04-27T07:22:34,961     reading manifest template 'MANIFEST.in'
2022-04-27T07:22:35,026     writing manifest file '/tmp/pip-pip-egg-info-_8dmonzw/phased_methylation.egg-info/SOURCES.txt'
2022-04-27T07:22:35,165   Source in /tmp/pip-wheel-4u8hz915/phased-methylation_ba585e7305ce49a0809f6fbe11ec85c0 has version 0.17.3, which satisfies requirement phased-methylation==0.17.3 from https://files.pythonhosted.org/packages/89/a1/6587c50d7fe4a45e8cf30550c2fb41d6143e35205969e914d61cfee30646/phased_methylation-0.17.3.tar.gz#sha256=d8e71136bcab8d6c3eed6e8a2d3cb0e61ceee8fd567c6a0de6d1549ad9146fd9
2022-04-27T07:22:35,166   Removed phased-methylation==0.17.3 from https://files.pythonhosted.org/packages/89/a1/6587c50d7fe4a45e8cf30550c2fb41d6143e35205969e914d61cfee30646/phased_methylation-0.17.3.tar.gz#sha256=d8e71136bcab8d6c3eed6e8a2d3cb0e61ceee8fd567c6a0de6d1549ad9146fd9 from build tracker '/tmp/pip-req-tracker-4jd3wrbu'
2022-04-27T07:22:35,176 Created temporary directory: /tmp/pip-unpack-6ysez45p
2022-04-27T07:22:35,177 Building wheels for collected packages: phased-methylation
2022-04-27T07:22:35,186   Created temporary directory: /tmp/pip-wheel-8_54h7ki
2022-04-27T07:22:35,187   Building wheel for phased-methylation (setup.py): started
2022-04-27T07:22:35,188   Destination directory: /tmp/pip-wheel-8_54h7ki
2022-04-27T07:22:35,189   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-4u8hz915/phased-methylation_ba585e7305ce49a0809f6fbe11ec85c0/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-4u8hz915/phased-methylation_ba585e7305ce49a0809f6fbe11ec85c0/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-8_54h7ki
2022-04-27T07:22:37,382   running bdist_wheel
2022-04-27T07:22:37,397   running build
2022-04-27T07:22:37,398   running build_py
2022-04-27T07:22:37,738   creating build
2022-04-27T07:22:37,739   creating build/lib
2022-04-27T07:22:37,741   creating build/lib/phased_methylation
2022-04-27T07:22:37,743   copying phased_methylation/launch.py -> build/lib/phased_methylation
2022-04-27T07:22:37,749   copying phased_methylation/phase.py -> build/lib/phased_methylation
2022-04-27T07:22:37,752   copying phased_methylation/export_metilene.py -> build/lib/phased_methylation
2022-04-27T07:22:37,756   copying phased_methylation/map.py -> build/lib/phased_methylation
2022-04-27T07:22:37,762   copying phased_methylation/tabulate.py -> build/lib/phased_methylation
2022-04-27T07:22:37,767   copying phased_methylation/plot_repeats.py -> build/lib/phased_methylation
2022-04-27T07:22:37,774   copying phased_methylation/plot_genes.py -> build/lib/phased_methylation
2022-04-27T07:22:37,780   copying phased_methylation/env.py -> build/lib/phased_methylation
2022-04-27T07:22:37,784   copying phased_methylation/check_gpu_availability.py -> build/lib/phased_methylation
2022-04-27T07:22:37,789   copying phased_methylation/split_methyl_bed.py -> build/lib/phased_methylation
2022-04-27T07:22:37,793   copying phased_methylation/parse_gff.py -> build/lib/phased_methylation
2022-04-27T07:22:37,797   copying phased_methylation/gene_body_methylation.py -> build/lib/phased_methylation
2022-04-27T07:22:37,802   copying phased_methylation/promoter_methylation.py -> build/lib/phased_methylation
2022-04-27T07:22:37,806   copying phased_methylation/plot_bedtools.py -> build/lib/phased_methylation
2022-04-27T07:22:37,810   copying phased_methylation/__init__.py -> build/lib/phased_methylation
2022-04-27T07:22:37,814   copying phased_methylation/phased_methylation.py -> build/lib/phased_methylation
2022-04-27T07:22:37,821   copying phased_methylation/merge.py -> build/lib/phased_methylation
2022-04-27T07:22:37,826   copying phased_methylation/plot.py -> build/lib/phased_methylation
2022-04-27T07:22:37,832   copying phased_methylation/methylation_kde.py -> build/lib/phased_methylation
2022-04-27T07:22:37,838   copying phased_methylation/mean.py -> build/lib/phased_methylation
2022-04-27T07:22:37,843   copying phased_methylation/call.py -> build/lib/phased_methylation
2022-04-27T07:22:37,847   copying phased_methylation/export_bedgraph.py -> build/lib/phased_methylation
2022-04-27T07:22:37,850   running egg_info
2022-04-27T07:22:37,881   writing entry points to phased_methylation.egg-info/entry_points.txt
2022-04-27T07:22:37,883   writing top-level names to phased_methylation.egg-info/top_level.txt
2022-04-27T07:22:37,884   writing phased_methylation.egg-info/PKG-INFO
2022-04-27T07:22:37,889   writing dependency_links to phased_methylation.egg-info/dependency_links.txt
2022-04-27T07:22:37,891   writing requirements to phased_methylation.egg-info/requires.txt
2022-04-27T07:22:37,907   reading manifest file 'phased_methylation.egg-info/SOURCES.txt'
2022-04-27T07:22:37,921   reading manifest template 'MANIFEST.in'
2022-04-27T07:22:37,967   writing manifest file 'phased_methylation.egg-info/SOURCES.txt'
2022-04-27T07:22:38,006   creating build/lib/phased_methylation/ecoli_example_data
2022-04-27T07:22:38,008   copying phased_methylation/ecoli_example_data/draft.fa -> build/lib/phased_methylation/ecoli_example_data
2022-04-27T07:22:38,441   copying phased_methylation/ecoli_example_data/reads.fasta -> build/lib/phased_methylation/ecoli_example_data
2022-04-27T07:22:38,506   creating build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,508   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch107_read4268_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,525   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch109_read2202_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,547   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read2109_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,562   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read5041_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,578   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch118_read886_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,594   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read2477_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,609   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read955_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,622   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch139_read6216_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,644   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch144_read1044_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,660   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch158_read5484_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,672   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch170_read4483_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,683   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch174_read3654_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,696   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch177_read1452_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,707   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch179_read1009_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,729   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch196_read2318_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,743   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch200_read6055_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,757   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch21_read1037_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,771   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch24_read2302_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,787   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch250_read878_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,802   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read2154_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,819   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read913_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,841   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch281_read4019_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,858   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read1687_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,867   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read2189_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,880   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch28_read503_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,895   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read1002_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,912   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read2497_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,922   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch292_read1173_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,930   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch294_read1069_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,945   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read1093_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,959   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read6122_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,976   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch309_read4050_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:38,986   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read4806_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,004   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read5270_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,015   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch326_read4256_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,029   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch342_read2347_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,046   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch350_read270_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,060   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch353_read1369_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,075   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch355_read2033_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,093   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read1047_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,106   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read4057_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,118   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4280_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,139   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4310_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,153   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4497_strand1.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,168   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read5665_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,187   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read929_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,195   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch381_read3165_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,205   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch383_read6112_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,216   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read2287_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,229   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read3493_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,246   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch403_read4689_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,256   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch407_read2873_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,276   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch40_read4532_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,286   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch418_read2596_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,299   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch41_read2892_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,316   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch420_read357_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,336   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch427_read1086_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,352   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch432_read393_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,368   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch433_read1144_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,384   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1483_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,403   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1894_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,414   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read2386_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,427   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read3275_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,438   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read394_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,450   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read1231_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,461   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read5435_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,476   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch44_read3066_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,486   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2786_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,502   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2860_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,520   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch467_read81_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,532   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch471_read263_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,545   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch477_read112_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,561   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read328_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,573   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read924_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,583   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1028_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,593   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1935_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,610   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read715_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,631   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch482_read758_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,644   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read1308_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,659   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read811_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,674   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch485_read77_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,683   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch486_read3631_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,692   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch490_read814_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,701   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch491_read3080_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,717   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read2488_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,732   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read5399_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,745   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch497_read3630_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,758   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch501_read29_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,772   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read1993_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,787   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read3234_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,801   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch506_read899_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,812   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3215_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,825   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3907_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,843   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read1147_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,863   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3088_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,879   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3412_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,896   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read1905_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,911   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read6087_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,926   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch66_read4851_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,939   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch69_read998_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,953   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch7_read2760_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,970   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch80_read1993_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:39,982   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read4752_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,003   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read564_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,019   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read2098_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,032   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read498_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,050   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch8_read1768_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,060   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch91_read2127_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,071   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read114_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,086   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read4662_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,102   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2298_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,111   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2551_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:40,127   creating build/lib/phased_methylation/longshot_example_data
2022-04-27T07:22:40,130   copying phased_methylation/longshot_example_data/genome.fa -> build/lib/phased_methylation/longshot_example_data
2022-04-27T07:22:40,195   copying phased_methylation/longshot_example_data/genome.fa.fai -> build/lib/phased_methylation/longshot_example_data
2022-04-27T07:22:40,201   copying phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz -> build/lib/phased_methylation/longshot_example_data
2022-04-27T07:22:40,208   copying phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz.tbi -> build/lib/phased_methylation/longshot_example_data
2022-04-27T07:22:40,215   copying phased_methylation/longshot_example_data/out.vcf.gz -> build/lib/phased_methylation/longshot_example_data
2022-04-27T07:22:40,225   copying phased_methylation/longshot_example_data/out.vcf.gz.tbi -> build/lib/phased_methylation/longshot_example_data
2022-04-27T07:22:40,231   copying phased_methylation/longshot_example_data/pacbio_reads_30x.bam -> build/lib/phased_methylation/longshot_example_data
2022-04-27T07:22:41,135   copying phased_methylation/longshot_example_data/pacbio_reads_30x.bam.bai -> build/lib/phased_methylation/longshot_example_data
2022-04-27T07:22:41,143   creating build/lib/phased_methylation/minimap2_example_data
2022-04-27T07:22:41,145   copying phased_methylation/minimap2_example_data/MT-human.fa -> build/lib/phased_methylation/minimap2_example_data
2022-04-27T07:22:41,154   copying phased_methylation/minimap2_example_data/MT-orang.fa -> build/lib/phased_methylation/minimap2_example_data
2022-04-27T07:22:41,162   copying phased_methylation/minimap2_example_data/test.bam -> build/lib/phased_methylation/minimap2_example_data
2022-04-27T07:22:41,169   copying phased_methylation/minimap2_example_data/test.bam.bai -> build/lib/phased_methylation/minimap2_example_data
2022-04-27T07:22:41,190   installing to build/bdist.linux-armv7l/wheel
2022-04-27T07:22:41,191   running install
2022-04-27T07:22:41,193   running install_lib
2022-04-27T07:22:41,201   creating build/bdist.linux-armv7l
2022-04-27T07:22:41,202   creating build/bdist.linux-armv7l/wheel
2022-04-27T07:22:41,206   creating build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:41,208   copying build/lib/phased_methylation/launch.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:41,214   creating build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T07:22:41,216   copying build/lib/phased_methylation/longshot_example_data/pacbio_reads_30x.bam -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T07:22:42,121   copying build/lib/phased_methylation/longshot_example_data/out.vcf.gz -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T07:22:42,132   copying build/lib/phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T07:22:42,140   copying build/lib/phased_methylation/longshot_example_data/genome.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T07:22:42,206   copying build/lib/phased_methylation/longshot_example_data/out.vcf.gz.tbi -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T07:22:42,213   copying build/lib/phased_methylation/longshot_example_data/pacbio_reads_30x.bam.bai -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T07:22:42,221   copying build/lib/phased_methylation/longshot_example_data/genome.fa.fai -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T07:22:42,227   copying build/lib/phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz.tbi -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T07:22:42,231   copying build/lib/phased_methylation/phase.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,236   copying build/lib/phased_methylation/export_metilene.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,242   copying build/lib/phased_methylation/map.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,247   copying build/lib/phased_methylation/tabulate.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,252   copying build/lib/phased_methylation/plot_repeats.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,258   copying build/lib/phased_methylation/plot_genes.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,264   copying build/lib/phased_methylation/env.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,271   copying build/lib/phased_methylation/check_gpu_availability.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,277   copying build/lib/phased_methylation/split_methyl_bed.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,285   copying build/lib/phased_methylation/parse_gff.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:42,292   creating build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data
2022-04-27T07:22:42,295   copying build/lib/phased_methylation/ecoli_example_data/draft.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data
2022-04-27T07:22:42,725   copying build/lib/phased_methylation/ecoli_example_data/reads.fasta -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data
2022-04-27T07:22:42,798   creating build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,800   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read2189_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,813   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch179_read1009_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,835   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch40_read4532_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,845   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read3493_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,862   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read715_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,881   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read114_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,896   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read498_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,912   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read811_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,925   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch91_read2127_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,933   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read2386_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,945   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read3275_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,955   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read4752_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,975   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch28_read503_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:42,990   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read328_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,003   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch309_read4050_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,013   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch66_read4851_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,025   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch170_read4483_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,036   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read394_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,047   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read2098_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,059   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch350_read270_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,071   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch80_read1993_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,082   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch420_read357_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,103   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch109_read2202_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,123   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch432_read393_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,137   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1894_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,148   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4497_strand1.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,161   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read1687_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,171   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1935_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,186   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3215_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,198   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read2154_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,213   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4310_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,226   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch177_read1452_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,237   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read3234_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,251   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read4057_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,261   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3088_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,275   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch294_read1069_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,288   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch433_read1144_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,304   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch491_read3080_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,319   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2298_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,329   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read929_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,337   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch174_read3654_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,349   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch139_read6216_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,367   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch21_read1037_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,380   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch144_read1044_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,394   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1028_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,404   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch69_read998_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,417   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch355_read2033_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,434   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read2287_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,447   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch44_read3066_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,457   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch8_read1768_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,466   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch200_read6055_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,479   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read4806_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,495   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3412_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,511   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch467_read81_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,523   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch342_read2347_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,539   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch497_read3630_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,551   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read1147_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,571   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read4662_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,586   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch281_read4019_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,603   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch292_read1173_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,611   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read2488_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,635   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch381_read3165_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,646   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch471_read263_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,660   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch24_read2302_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,675   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch158_read5484_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,686   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read5665_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,704   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch506_read899_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,715   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read1002_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,731   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read6087_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,745   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read1993_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,759   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch41_read2892_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,775   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read6122_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,789   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read1308_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,802   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch490_read814_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,811   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2860_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,828   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch326_read4256_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,841   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1483_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,858   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch407_read2873_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,877   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read5435_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,890   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch107_read4268_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,906   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read2497_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,917   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4280_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,935   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch353_read1369_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,948   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3907_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,968   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch7_read2760_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,984   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch418_read2596_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:43,998   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch118_read886_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,013   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch250_read878_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,026   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read2477_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,040   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch485_read77_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,049   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read955_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,061   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch427_read1086_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,078   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read1093_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,092   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read1905_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,106   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read1231_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,116   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2786_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,131   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch383_read6112_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,143   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read924_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,154   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read5399_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,166   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch501_read29_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,179   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read5041_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,193   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch482_read758_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,203   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read1047_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,213   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read2109_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,225   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch477_read112_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,240   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch403_read4689_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,249   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2551_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,265   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read913_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,285   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read5270_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,294   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read564_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,308   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch486_read3631_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,317   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch196_read2318_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T07:22:44,331   creating build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T07:22:44,333   copying build/lib/phased_methylation/minimap2_example_data/test.bam.bai -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T07:22:44,337   copying build/lib/phased_methylation/minimap2_example_data/MT-orang.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T07:22:44,343   copying build/lib/phased_methylation/minimap2_example_data/test.bam -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T07:22:44,349   copying build/lib/phased_methylation/minimap2_example_data/MT-human.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T07:22:44,356   copying build/lib/phased_methylation/gene_body_methylation.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,362   copying build/lib/phased_methylation/promoter_methylation.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,367   copying build/lib/phased_methylation/plot_bedtools.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,373   copying build/lib/phased_methylation/__init__.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,378   copying build/lib/phased_methylation/phased_methylation.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,386   copying build/lib/phased_methylation/merge.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,390   copying build/lib/phased_methylation/plot.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,395   copying build/lib/phased_methylation/methylation_kde.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,399   copying build/lib/phased_methylation/mean.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,403   copying build/lib/phased_methylation/call.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,408   copying build/lib/phased_methylation/export_bedgraph.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T07:22:44,411   running install_egg_info
2022-04-27T07:22:44,428   Copying phased_methylation.egg-info to build/bdist.linux-armv7l/wheel/phased_methylation-0.17.3-py3.5.egg-info
2022-04-27T07:22:44,463   running install_scripts
2022-04-27T07:22:44,680   creating build/bdist.linux-armv7l/wheel/phased_methylation-0.17.3.dist-info/WHEEL
2022-04-27T07:22:55,358   Building wheel for phased-methylation (setup.py): finished with status 'done'
2022-04-27T07:22:55,675   Created wheel for phased-methylation: filename=phased_methylation-0.17.3-py3-none-any.whl size=19115552 sha256=08f4e12d17be7773ff46992e456682f95a1cfdee2c4501fdc50c73a9ed00b76a
2022-04-27T07:22:55,676   Stored in directory: /tmp/pip-ephem-wheel-cache-ak06w8qg/wheels/02/0b/78/17cc4653db79a6bd0f6c7a1f508475d52ed0229b79d3757d58
2022-04-27T07:22:55,718 Successfully built phased-methylation
2022-04-27T07:22:59,032 Removed build tracker: '/tmp/pip-req-tracker-4jd3wrbu'