2022-04-27T14:07:52,870 Created temporary directory: /tmp/pip-ephem-wheel-cache-ym_v1o9e
2022-04-27T14:07:52,877 Created temporary directory: /tmp/pip-req-tracker-hec38e0b
2022-04-27T14:07:52,877 Initialized build tracking at /tmp/pip-req-tracker-hec38e0b
2022-04-27T14:07:52,878 Created build tracker: /tmp/pip-req-tracker-hec38e0b
2022-04-27T14:07:52,878 Entered build tracker: /tmp/pip-req-tracker-hec38e0b
2022-04-27T14:07:52,880 Created temporary directory: /tmp/pip-wheel-nqrx6y8v
2022-04-27T14:07:52,935 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-04-27T14:07:52,939 2 location(s) to search for versions of phased-methylation:
2022-04-27T14:07:52,939 * https://pypi.org/simple/phased-methylation/
2022-04-27T14:07:52,939 * https://www.piwheels.org/simple/phased-methylation/
2022-04-27T14:07:52,940 Fetching project page and analyzing links: https://pypi.org/simple/phased-methylation/
2022-04-27T14:07:52,942 Getting page https://pypi.org/simple/phased-methylation/
2022-04-27T14:07:52,946 Found index url https://pypi.org/simple
2022-04-27T14:07:53,263   Skipping link: No binaries permitted for phased-methylation: https://files.pythonhosted.org/packages/ab/35/5da5df4f58cc8019ed6d3a53a8fbfcd22b6e55defbe04496766abcf021d7/phased_methylation-0.17.3-py3-none-any.whl#sha256=d01ff9b7e22f07a64801e50226d22a17e8be5dba92b99d1d08ad44cbae876136 (from https://pypi.org/simple/phased-methylation/)
2022-04-27T14:07:53,264   Found link https://files.pythonhosted.org/packages/89/a1/6587c50d7fe4a45e8cf30550c2fb41d6143e35205969e914d61cfee30646/phased_methylation-0.17.3.tar.gz#sha256=d8e71136bcab8d6c3eed6e8a2d3cb0e61ceee8fd567c6a0de6d1549ad9146fd9 (from https://pypi.org/simple/phased-methylation/), version: 0.17.3
2022-04-27T14:07:53,266   Skipping link: No binaries permitted for phased-methylation: https://files.pythonhosted.org/packages/91/3b/f48111f432f65b0865c3249cb122953f28b17b400f0053220c474f2cd474/phased_methylation-0.17.4-py3-none-any.whl#sha256=03cd03f96869eaa05204d3b73a4fc81e413c1d6197bb15817f1721e1c598d1e4 (from https://pypi.org/simple/phased-methylation/)
2022-04-27T14:07:53,266   Found link https://files.pythonhosted.org/packages/79/32/dcad393dd03ff51d9ef0b102d8a832c9e77b12d6e5400d669300c7da7be4/phased_methylation-0.17.4.tar.gz#sha256=54348b41c685b549bb6c94661f8a4728b78d63bb4bc3a5f9352910fca3387952 (from https://pypi.org/simple/phased-methylation/), version: 0.17.4
2022-04-27T14:07:53,267 Fetching project page and analyzing links: https://www.piwheels.org/simple/phased-methylation/
2022-04-27T14:07:53,268 Getting page https://www.piwheels.org/simple/phased-methylation/
2022-04-27T14:07:53,270 Found index url https://www.piwheels.org/simple
2022-04-27T14:07:53,487   Skipping link: No binaries permitted for phased-methylation: https://www.piwheels.org/simple/phased-methylation/phased_methylation-0.17.3-py3-none-any.whl#sha256=08f4e12d17be7773ff46992e456682f95a1cfdee2c4501fdc50c73a9ed00b76a (from https://www.piwheels.org/simple/phased-methylation/)
2022-04-27T14:07:53,516 Given no hashes to check 1 links for project 'phased-methylation': discarding no candidates
2022-04-27T14:07:53,548 Collecting phased-methylation==0.17.4
2022-04-27T14:07:53,552   Created temporary directory: /tmp/pip-unpack-zmsalzfl
2022-04-27T14:07:55,030   Downloading phased_methylation-0.17.4.tar.gz (19.0 MB)
2022-04-27T14:08:03,480   Added phased-methylation==0.17.4 from https://files.pythonhosted.org/packages/79/32/dcad393dd03ff51d9ef0b102d8a832c9e77b12d6e5400d669300c7da7be4/phased_methylation-0.17.4.tar.gz#sha256=54348b41c685b549bb6c94661f8a4728b78d63bb4bc3a5f9352910fca3387952 to build tracker '/tmp/pip-req-tracker-hec38e0b'
2022-04-27T14:08:03,484     Running setup.py (path:/tmp/pip-wheel-nqrx6y8v/phased-methylation_9712b3640f0a41aa81b2ef258979e180/setup.py) egg_info for package phased-methylation
2022-04-27T14:08:03,486     Created temporary directory: /tmp/pip-pip-egg-info-z3c4bdkj
2022-04-27T14:08:03,488     Running command python setup.py egg_info
2022-04-27T14:08:05,991     running egg_info
2022-04-27T14:08:05,997     creating /tmp/pip-pip-egg-info-z3c4bdkj/phased_methylation.egg-info
2022-04-27T14:08:05,999     writing dependency_links to /tmp/pip-pip-egg-info-z3c4bdkj/phased_methylation.egg-info/dependency_links.txt
2022-04-27T14:08:06,003     writing entry points to /tmp/pip-pip-egg-info-z3c4bdkj/phased_methylation.egg-info/entry_points.txt
2022-04-27T14:08:06,005     writing top-level names to /tmp/pip-pip-egg-info-z3c4bdkj/phased_methylation.egg-info/top_level.txt
2022-04-27T14:08:06,008     writing requirements to /tmp/pip-pip-egg-info-z3c4bdkj/phased_methylation.egg-info/requires.txt
2022-04-27T14:08:06,010     writing /tmp/pip-pip-egg-info-z3c4bdkj/phased_methylation.egg-info/PKG-INFO
2022-04-27T14:08:06,016     writing manifest file '/tmp/pip-pip-egg-info-z3c4bdkj/phased_methylation.egg-info/SOURCES.txt'
2022-04-27T14:08:06,405     reading manifest file '/tmp/pip-pip-egg-info-z3c4bdkj/phased_methylation.egg-info/SOURCES.txt'
2022-04-27T14:08:06,409     reading manifest template 'MANIFEST.in'
2022-04-27T14:08:06,458     writing manifest file '/tmp/pip-pip-egg-info-z3c4bdkj/phased_methylation.egg-info/SOURCES.txt'
2022-04-27T14:08:06,603   Source in /tmp/pip-wheel-nqrx6y8v/phased-methylation_9712b3640f0a41aa81b2ef258979e180 has version 0.17.4, which satisfies requirement phased-methylation==0.17.4 from https://files.pythonhosted.org/packages/79/32/dcad393dd03ff51d9ef0b102d8a832c9e77b12d6e5400d669300c7da7be4/phased_methylation-0.17.4.tar.gz#sha256=54348b41c685b549bb6c94661f8a4728b78d63bb4bc3a5f9352910fca3387952
2022-04-27T14:08:06,604   Removed phased-methylation==0.17.4 from https://files.pythonhosted.org/packages/79/32/dcad393dd03ff51d9ef0b102d8a832c9e77b12d6e5400d669300c7da7be4/phased_methylation-0.17.4.tar.gz#sha256=54348b41c685b549bb6c94661f8a4728b78d63bb4bc3a5f9352910fca3387952 from build tracker '/tmp/pip-req-tracker-hec38e0b'
2022-04-27T14:08:06,614 Created temporary directory: /tmp/pip-unpack-1t393tse
2022-04-27T14:08:06,615 Building wheels for collected packages: phased-methylation
2022-04-27T14:08:06,624   Created temporary directory: /tmp/pip-wheel-i3446tji
2022-04-27T14:08:06,625   Building wheel for phased-methylation (setup.py): started
2022-04-27T14:08:06,626   Destination directory: /tmp/pip-wheel-i3446tji
2022-04-27T14:08:06,626   Running command /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-wheel-nqrx6y8v/phased-methylation_9712b3640f0a41aa81b2ef258979e180/setup.py'"'"'; __file__='"'"'/tmp/pip-wheel-nqrx6y8v/phased-methylation_9712b3640f0a41aa81b2ef258979e180/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-i3446tji
2022-04-27T14:08:09,119   running bdist_wheel
2022-04-27T14:08:09,135   running build
2022-04-27T14:08:09,136   running build_py
2022-04-27T14:08:09,477   creating build
2022-04-27T14:08:09,477   creating build/lib
2022-04-27T14:08:09,479   creating build/lib/phased_methylation
2022-04-27T14:08:09,481   copying phased_methylation/launch.py -> build/lib/phased_methylation
2022-04-27T14:08:09,487   copying phased_methylation/methylation_kde.py -> build/lib/phased_methylation
2022-04-27T14:08:09,491   copying phased_methylation/phased_methylation.py -> build/lib/phased_methylation
2022-04-27T14:08:09,498   copying phased_methylation/plot_genes.py -> build/lib/phased_methylation
2022-04-27T14:08:09,503   copying phased_methylation/check_gpu_availability.py -> build/lib/phased_methylation
2022-04-27T14:08:09,508   copying phased_methylation/plot_repeats.py -> build/lib/phased_methylation
2022-04-27T14:08:09,514   copying phased_methylation/__init__.py -> build/lib/phased_methylation
2022-04-27T14:08:09,519   copying phased_methylation/intersect.py -> build/lib/phased_methylation
2022-04-27T14:08:09,524   copying phased_methylation/parse_gff.py -> build/lib/phased_methylation
2022-04-27T14:08:09,529   copying phased_methylation/promoter_methylation.py -> build/lib/phased_methylation
2022-04-27T14:08:09,533   copying phased_methylation/mean.py -> build/lib/phased_methylation
2022-04-27T14:08:09,537   copying phased_methylation/export_metilene.py -> build/lib/phased_methylation
2022-04-27T14:08:09,541   copying phased_methylation/plot_bedtools.py -> build/lib/phased_methylation
2022-04-27T14:08:09,547   copying phased_methylation/tabulate.py -> build/lib/phased_methylation
2022-04-27T14:08:09,552   copying phased_methylation/plot.py -> build/lib/phased_methylation
2022-04-27T14:08:09,558   copying phased_methylation/call.py -> build/lib/phased_methylation
2022-04-27T14:08:09,564   copying phased_methylation/export_bedgraph.py -> build/lib/phased_methylation
2022-04-27T14:08:09,568   copying phased_methylation/map.py -> build/lib/phased_methylation
2022-04-27T14:08:09,573   copying phased_methylation/merge.py -> build/lib/phased_methylation
2022-04-27T14:08:09,577   copying phased_methylation/split_methyl_bed.py -> build/lib/phased_methylation
2022-04-27T14:08:09,581   copying phased_methylation/env.py -> build/lib/phased_methylation
2022-04-27T14:08:09,586   copying phased_methylation/gene_body_methylation.py -> build/lib/phased_methylation
2022-04-27T14:08:09,592   copying phased_methylation/phase.py -> build/lib/phased_methylation
2022-04-27T14:08:09,596   running egg_info
2022-04-27T14:08:09,632   writing top-level names to phased_methylation.egg-info/top_level.txt
2022-04-27T14:08:09,634   writing requirements to phased_methylation.egg-info/requires.txt
2022-04-27T14:08:09,636   writing dependency_links to phased_methylation.egg-info/dependency_links.txt
2022-04-27T14:08:09,639   writing entry points to phased_methylation.egg-info/entry_points.txt
2022-04-27T14:08:09,773   writing phased_methylation.egg-info/PKG-INFO
2022-04-27T14:08:09,836   reading manifest file 'phased_methylation.egg-info/SOURCES.txt'
2022-04-27T14:08:09,848   reading manifest template 'MANIFEST.in'
2022-04-27T14:08:09,893   writing manifest file 'phased_methylation.egg-info/SOURCES.txt'
2022-04-27T14:08:09,932   creating build/lib/phased_methylation/ecoli_example_data
2022-04-27T14:08:09,934   copying phased_methylation/ecoli_example_data/draft.fa -> build/lib/phased_methylation/ecoli_example_data
2022-04-27T14:08:10,370   copying phased_methylation/ecoli_example_data/reads.fasta -> build/lib/phased_methylation/ecoli_example_data
2022-04-27T14:08:10,435   creating build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,437   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch107_read4268_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,455   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch109_read2202_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,478   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read2109_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,494   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read5041_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,511   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch118_read886_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,528   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read2477_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,545   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read955_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,559   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch139_read6216_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,580   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch144_read1044_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,596   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch158_read5484_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,609   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch170_read4483_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,619   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch174_read3654_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,631   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch177_read1452_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,644   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch179_read1009_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,667   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch196_read2318_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,681   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch200_read6055_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,696   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch21_read1037_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,710   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch24_read2302_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,724   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch250_read878_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,737   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read2154_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,754   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read913_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,776   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch281_read4019_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,809   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read1687_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,822   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read2189_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,838   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch28_read503_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,854   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read1002_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,873   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read2497_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,884   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch292_read1173_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,893   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch294_read1069_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,909   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read1093_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,924   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read6122_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,941   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch309_read4050_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,954   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read4806_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,972   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read5270_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,983   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch326_read4256_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:10,998   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch342_read2347_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,014   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch350_read270_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,028   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch353_read1369_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,042   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch355_read2033_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,060   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read1047_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,073   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read4057_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,085   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4280_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,105   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4310_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,121   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4497_strand1.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,137   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read5665_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,156   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read929_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,166   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch381_read3165_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,177   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch383_read6112_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,191   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read2287_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,205   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read3493_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,223   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch403_read4689_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,233   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch407_read2873_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,252   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch40_read4532_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,263   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch418_read2596_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,279   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch41_read2892_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,296   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch420_read357_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,318   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch427_read1086_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,336   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch432_read393_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,351   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch433_read1144_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,366   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1483_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,384   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1894_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,396   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read2386_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,408   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read3275_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,420   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read394_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,431   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read1231_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,440   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read5435_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,454   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch44_read3066_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,465   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2786_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,480   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2860_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,497   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch467_read81_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,509   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch471_read263_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,524   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch477_read112_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,540   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read328_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,554   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read924_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,566   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1028_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,577   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1935_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,594   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read715_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,613   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch482_read758_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,623   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read1308_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,638   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read811_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,653   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch485_read77_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,662   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch486_read3631_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,673   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch490_read814_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,685   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch491_read3080_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,702   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read2488_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,716   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read5399_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,730   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch497_read3630_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,745   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch501_read29_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,759   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read1993_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,774   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read3234_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,790   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch506_read899_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,801   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3215_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,814   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3907_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,836   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read1147_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,856   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3088_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,870   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3412_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,887   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read1905_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,900   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read6087_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,914   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch66_read4851_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,927   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch69_read998_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,942   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch7_read2760_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,958   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch80_read1993_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,971   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read4752_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:11,992   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read564_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:12,006   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read2098_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:12,018   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read498_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:12,036   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch8_read1768_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:12,047   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch91_read2127_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:12,057   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read114_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:12,073   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read4662_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:12,090   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2298_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:12,102   copying phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2551_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:12,119   creating build/lib/phased_methylation/longshot_example_data
2022-04-27T14:08:12,121   copying phased_methylation/longshot_example_data/genome.fa -> build/lib/phased_methylation/longshot_example_data
2022-04-27T14:08:12,185   copying phased_methylation/longshot_example_data/genome.fa.fai -> build/lib/phased_methylation/longshot_example_data
2022-04-27T14:08:12,190   copying phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz -> build/lib/phased_methylation/longshot_example_data
2022-04-27T14:08:12,197   copying phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz.tbi -> build/lib/phased_methylation/longshot_example_data
2022-04-27T14:08:12,205   copying phased_methylation/longshot_example_data/out.vcf.gz -> build/lib/phased_methylation/longshot_example_data
2022-04-27T14:08:12,217   copying phased_methylation/longshot_example_data/out.vcf.gz.tbi -> build/lib/phased_methylation/longshot_example_data
2022-04-27T14:08:12,222   copying phased_methylation/longshot_example_data/pacbio_reads_30x.bam -> build/lib/phased_methylation/longshot_example_data
2022-04-27T14:08:13,128   copying phased_methylation/longshot_example_data/pacbio_reads_30x.bam.bai -> build/lib/phased_methylation/longshot_example_data
2022-04-27T14:08:13,137   creating build/lib/phased_methylation/minimap2_example_data
2022-04-27T14:08:13,141   copying phased_methylation/minimap2_example_data/MT-human.fa -> build/lib/phased_methylation/minimap2_example_data
2022-04-27T14:08:13,152   copying phased_methylation/minimap2_example_data/MT-orang.fa -> build/lib/phased_methylation/minimap2_example_data
2022-04-27T14:08:13,159   copying phased_methylation/minimap2_example_data/test.bam -> build/lib/phased_methylation/minimap2_example_data
2022-04-27T14:08:13,166   copying phased_methylation/minimap2_example_data/test.bam.bai -> build/lib/phased_methylation/minimap2_example_data
2022-04-27T14:08:13,194   installing to build/bdist.linux-armv7l/wheel
2022-04-27T14:08:13,195   running install
2022-04-27T14:08:13,198   running install_lib
2022-04-27T14:08:13,207   creating build/bdist.linux-armv7l
2022-04-27T14:08:13,208   creating build/bdist.linux-armv7l/wheel
2022-04-27T14:08:13,214   creating build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:13,217   copying build/lib/phased_methylation/launch.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:13,224   copying build/lib/phased_methylation/methylation_kde.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:13,230   creating build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data
2022-04-27T14:08:13,233   copying build/lib/phased_methylation/ecoli_example_data/reads.fasta -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data
2022-04-27T14:08:13,310   creating build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,312   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch107_read4268_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,327   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch24_read2302_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,342   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read913_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,362   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3088_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,375   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch486_read3631_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,385   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch467_read81_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,396   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch501_read29_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,408   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read564_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,420   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch44_read3066_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,428   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch497_read3630_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,439   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read5399_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,451   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read2497_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,460   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read5270_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,469   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch292_read1173_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,477   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read1687_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,487   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch471_read263_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,500   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read5665_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,516   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch482_read758_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,524   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read5041_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,538   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch158_read5484_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,549   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1028_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,558   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1935_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,572   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read811_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,585   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch485_read77_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,594   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2298_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,603   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read715_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,622   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch200_read6055_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,636   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read1231_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,645   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch353_read1369_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,656   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read328_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,669   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read2189_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,681   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2551_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,695   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch118_read886_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,708   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read2109_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,720   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch139_read6216_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,741   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch381_read3165_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,750   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read5435_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,763   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read2287_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,776   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch91_read2127_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,785   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1894_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,796   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch40_read4532_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,806   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1483_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,823   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read3493_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,838   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read498_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,853   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4310_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,865   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch8_read1768_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,875   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch350_read270_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,887   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read1905_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,899   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read924_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,910   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read1993_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,924   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read1047_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,934   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4497_strand1.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,947   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch506_read899_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,956   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read2154_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,975   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch342_read2347_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:13,991   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch407_read2873_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,009   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3412_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,024   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch490_read814_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,033   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch418_read2596_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,047   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch294_read1069_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,060   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch21_read1037_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,072   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch477_read112_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,086   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read2477_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,098   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch326_read4256_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,110   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read394_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,119   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch174_read3654_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,130   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch170_read4483_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,141   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3907_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,159   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read955_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,171   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch420_read357_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,191   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read1308_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,203   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read1002_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,218   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch309_read4050_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,228   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2860_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,243   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch179_read1009_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,264   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch383_read6112_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,276   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch41_read2892_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,291   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch196_read2318_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,305   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read2488_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,318   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch28_read503_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,332   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read3234_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,346   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read4057_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,355   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read2386_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,366   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch427_read1086_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,383   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read6122_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,398   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read1093_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,411   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read3275_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,422   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch177_read1452_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,432   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch144_read1044_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,444   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch432_read393_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,459   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read929_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,467   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch355_read2033_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,483   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch69_read998_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,496   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read4752_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,515   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read4806_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,530   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2786_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,545   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read6087_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,558   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch7_read2760_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,573   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch403_read4689_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,582   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch80_read1993_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,593   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch491_read3080_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,608   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch281_read4019_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,624   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read2098_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,636   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3215_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,646   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4280_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,663   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch433_read1144_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,678   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch250_read878_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,689   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch66_read4851_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,700   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch109_read2202_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,720   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read114_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,734   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read1147_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,754   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read4662_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2022-04-27T14:08:14,769   copying build/lib/phased_methylation/ecoli_example_data/draft.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data
2022-04-27T14:08:15,399   copying build/lib/phased_methylation/phased_methylation.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:15,407   copying build/lib/phased_methylation/plot_genes.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:15,412   copying build/lib/phased_methylation/check_gpu_availability.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:15,416   copying build/lib/phased_methylation/plot_repeats.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:15,422   creating build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T14:08:15,424   copying build/lib/phased_methylation/longshot_example_data/genome.fa.fai -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T14:08:15,430   copying build/lib/phased_methylation/longshot_example_data/genome.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T14:08:15,494   copying build/lib/phased_methylation/longshot_example_data/pacbio_reads_30x.bam.bai -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T14:08:15,501   copying build/lib/phased_methylation/longshot_example_data/out.vcf.gz.tbi -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T14:08:15,506   copying build/lib/phased_methylation/longshot_example_data/pacbio_reads_30x.bam -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T14:08:16,420   copying build/lib/phased_methylation/longshot_example_data/out.vcf.gz -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T14:08:16,428   copying build/lib/phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T14:08:16,432   copying build/lib/phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz.tbi -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2022-04-27T14:08:16,436   copying build/lib/phased_methylation/__init__.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,443   creating build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T14:08:16,445   copying build/lib/phased_methylation/minimap2_example_data/test.bam -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T14:08:16,452   copying build/lib/phased_methylation/minimap2_example_data/MT-human.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T14:08:16,460   copying build/lib/phased_methylation/minimap2_example_data/MT-orang.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T14:08:16,468   copying build/lib/phased_methylation/minimap2_example_data/test.bam.bai -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2022-04-27T14:08:16,473   copying build/lib/phased_methylation/intersect.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,478   copying build/lib/phased_methylation/parse_gff.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,484   copying build/lib/phased_methylation/promoter_methylation.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,488   copying build/lib/phased_methylation/mean.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,492   copying build/lib/phased_methylation/export_metilene.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,496   copying build/lib/phased_methylation/plot_bedtools.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,500   copying build/lib/phased_methylation/tabulate.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,505   copying build/lib/phased_methylation/plot.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,512   copying build/lib/phased_methylation/call.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,518   copying build/lib/phased_methylation/export_bedgraph.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,524   copying build/lib/phased_methylation/map.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,530   copying build/lib/phased_methylation/merge.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,535   copying build/lib/phased_methylation/split_methyl_bed.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,541   copying build/lib/phased_methylation/env.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,545   copying build/lib/phased_methylation/gene_body_methylation.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,549   copying build/lib/phased_methylation/phase.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2022-04-27T14:08:16,553   running install_egg_info
2022-04-27T14:08:16,562   Copying phased_methylation.egg-info to build/bdist.linux-armv7l/wheel/phased_methylation-0.17.4-py3.5.egg-info
2022-04-27T14:08:16,596   running install_scripts
2022-04-27T14:08:16,808   creating build/bdist.linux-armv7l/wheel/phased_methylation-0.17.4.dist-info/WHEEL
2022-04-27T14:08:27,450   Building wheel for phased-methylation (setup.py): finished with status 'done'
2022-04-27T14:08:27,766   Created wheel for phased-methylation: filename=phased_methylation-0.17.4-py3-none-any.whl size=19116202 sha256=45c6cd38cfdf15dfedcc20bdf51b94f6db6c8665ef202f4545cac255284aa384
2022-04-27T14:08:27,767   Stored in directory: /tmp/pip-ephem-wheel-cache-ym_v1o9e/wheels/7f/ff/20/ab72e2634bc56bb8e8140d96b425c435a71d641d9fcf7649d2
2022-04-27T14:08:27,810 Successfully built phased-methylation
2022-04-27T14:08:31,139 Removed build tracker: '/tmp/pip-req-tracker-hec38e0b'