2022-05-14T19:01:10,389 Created temporary directory: /tmp/pip-ephem-wheel-cache-8al6js92 2022-05-14T19:01:10,395 Created temporary directory: /tmp/pip-req-tracker-w97hbp3p 2022-05-14T19:01:10,395 Initialized build tracking at /tmp/pip-req-tracker-w97hbp3p 2022-05-14T19:01:10,396 Created build tracker: /tmp/pip-req-tracker-w97hbp3p 2022-05-14T19:01:10,396 Entered build tracker: /tmp/pip-req-tracker-w97hbp3p 2022-05-14T19:01:10,397 Created temporary directory: /tmp/pip-wheel-cqtkb8cf 2022-05-14T19:01:10,465 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-05-14T19:01:10,473 2 location(s) to search for versions of squidpy: 2022-05-14T19:01:10,473 * https://pypi.org/simple/squidpy/ 2022-05-14T19:01:10,473 * https://www.piwheels.org/simple/squidpy/ 2022-05-14T19:01:10,475 Fetching project page and analyzing links: https://pypi.org/simple/squidpy/ 2022-05-14T19:01:10,476 Getting page https://pypi.org/simple/squidpy/ 2022-05-14T19:01:10,479 Found index url https://pypi.org/simple 2022-05-14T19:01:10,600 Skipping link: No binaries permitted for squidpy: https://files.pythonhosted.org/packages/33/ed/1eecd8a6cfe9f6d64fac873fcad49bac34a03fcde727f3e271da4302f9ae/squidpy-1.0.0-py3-none-any.whl#sha256=33e0ab571a843f5b9239a8173d0f945dc33993a558a52fb9a1f311d3b69fce84 (from https://pypi.org/simple/squidpy/) 2022-05-14T19:01:10,601 Found link https://files.pythonhosted.org/packages/e6/e7/64a893722ebf2f7826d11dde21ee9f265589559c4122de96d41a63de8f0e/squidpy-1.0.0.tar.gz#sha256=07a20c48a50956a2f8612f7c330a1e6ddbf44dc00e9291f62de134bd747a36ed (from https://pypi.org/simple/squidpy/), version: 1.0.0 2022-05-14T19:01:10,601 Skipping link: No binaries permitted for squidpy: https://files.pythonhosted.org/packages/98/7c/8fe1df5fc4df36ff92018c48ea382e6da83aba3c33692e82c5de35866b78/squidpy-1.0.1-py3-none-any.whl#sha256=5b2139258d5f5355b92659d25a5de47920c99a4df332a5b190fbb2b6ee218bb3 (from https://pypi.org/simple/squidpy/) 2022-05-14T19:01:10,602 Found link https://files.pythonhosted.org/packages/3d/17/a56f7489fd9d59f63ec4f86b8ad8b53fa89538a6c589e997a7885224cc13/squidpy-1.0.1.tar.gz#sha256=b08e02b274d519cb489b3886a81c94d9802ccc92b2c8ae521301904837cc25cd (from https://pypi.org/simple/squidpy/), version: 1.0.1 2022-05-14T19:01:10,603 Skipping link: No binaries permitted for squidpy: https://files.pythonhosted.org/packages/dc/ee/15c1b43c4b2d8572ae5d61cee7fdc9c527e2ffee12dbe35dddc894a1576d/squidpy-1.1.0-py3-none-any.whl#sha256=2dfdb72430ec83a6878a8a1574e3e905224a079a34183605d7be26ad56245ed3 (from https://pypi.org/simple/squidpy/) 2022-05-14T19:01:10,603 Found link https://files.pythonhosted.org/packages/b7/d8/683cc8249442a2fc1a690d50ddab19e87f128ae708617b7d646d6e828e5a/squidpy-1.1.0.tar.gz#sha256=5c35580f76e6a467799af87dc70635eef0461af50a6ede17918848cb22237b11 (from https://pypi.org/simple/squidpy/), version: 1.1.0 2022-05-14T19:01:10,604 Skipping link: No binaries permitted for squidpy: https://files.pythonhosted.org/packages/22/a8/e0e9e06200974bd13db00f5b13166692b2494d3601d322ccd8907fadeea3/squidpy-1.1.1-py3-none-any.whl#sha256=6a05faba565ac81d345fd3c5b0b8be58cdb9f71496c41199a52a53ba98563495 (from https://pypi.org/simple/squidpy/) 2022-05-14T19:01:10,605 Found link https://files.pythonhosted.org/packages/54/f0/528059156fa3d8b02babcf10bfed7f17b90f5a5280f61752eb5e339f8cf1/squidpy-1.1.1.tar.gz#sha256=ed4cd0de0d314ce37b7fd89d908ee0435a3f420ea9930e4533ef733b99d59105 (from https://pypi.org/simple/squidpy/), version: 1.1.1 2022-05-14T19:01:10,605 Skipping link: No binaries permitted for squidpy: https://files.pythonhosted.org/packages/b8/56/5402de970f1294e436eb211f494aa65ca2c82c60ea6780c788b67df170c3/squidpy-1.1.2-py3-none-any.whl#sha256=0875bb4b5f9dfa8b2e3cabad80343df9a9d7022bdaa621c23d9c2c06e9f9d7ef (from https://pypi.org/simple/squidpy/) 2022-05-14T19:01:10,606 Found link https://files.pythonhosted.org/packages/fe/99/cb4f463ab818f6b6267247c70dc94bf333baf116548a953e1d3526514f1b/squidpy-1.1.2.tar.gz#sha256=287763f16d12e56f429aef4da5c5614bf75e8107c547a0fc401340d029cc563b (from https://pypi.org/simple/squidpy/), version: 1.1.2 2022-05-14T19:01:10,607 Skipping link: No binaries permitted for squidpy: https://files.pythonhosted.org/packages/c1/b3/6d95bc0fd9f207f9c285a3efedef400de5d4c73bc75c1ed7a6808bb92dc2/squidpy-1.2.0-py3-none-any.whl#sha256=22b4331c01baa45dcb0f86ad5746c0f3923ffa8012fcf5a64209f1085089952e (from https://pypi.org/simple/squidpy/) 2022-05-14T19:01:10,607 Found link https://files.pythonhosted.org/packages/7c/d3/27871c80bba82641e61b8d5d4d5796776a742a55ddee62dc79c62ed88dba/squidpy-1.2.0.tar.gz#sha256=4889290c81200dbfcd67a3f72e487cdab2c27f67fdaf0e0c83602ab9dd5b19f1 (from https://pypi.org/simple/squidpy/), version: 1.2.0 2022-05-14T19:01:10,608 Skipping link: No binaries permitted for squidpy: https://files.pythonhosted.org/packages/e7/de/5cd79b0ce125b607b2786e8838854aba206b98d1cc6414cd29de756e484f/squidpy-1.2.1-py3-none-any.whl#sha256=3bddfa32ea1a94e226176f5ebb0383cb04fca1f666faf70a596eab32ccf6dfd0 (from https://pypi.org/simple/squidpy/) 2022-05-14T19:01:10,608 Found link https://files.pythonhosted.org/packages/15/c0/5ec55824f9fa5cf662bbd8b99cc5422afc9331d7147f27896fb782227968/squidpy-1.2.1.tar.gz#sha256=a32609afb16e7f7d1675e3ed4b10bab5c9509a9ab5dae7732fc28b399aaece7b (from https://pypi.org/simple/squidpy/), version: 1.2.1 2022-05-14T19:01:10,609 Fetching project page and analyzing links: https://www.piwheels.org/simple/squidpy/ 2022-05-14T19:01:10,610 Getting page https://www.piwheels.org/simple/squidpy/ 2022-05-14T19:01:10,612 Found index url https://www.piwheels.org/simple 2022-05-14T19:01:10,859 Skipping link: No binaries permitted for squidpy: https://www.piwheels.org/simple/squidpy/squidpy-1.1.0-py3-none-any.whl#sha256=2dfdb72430ec83a6878a8a1574e3e905224a079a34183605d7be26ad56245ed3 (from https://www.piwheels.org/simple/squidpy/) 2022-05-14T19:01:10,860 Skipping link: No binaries permitted for squidpy: https://www.piwheels.org/simple/squidpy/squidpy-1.0.1-py3-none-any.whl#sha256=5b2139258d5f5355b92659d25a5de47920c99a4df332a5b190fbb2b6ee218bb3 (from https://www.piwheels.org/simple/squidpy/) 2022-05-14T19:01:10,860 Skipping link: No binaries permitted for squidpy: https://www.piwheels.org/simple/squidpy/squidpy-1.0.0-py3-none-any.whl#sha256=33e0ab571a843f5b9239a8173d0f945dc33993a558a52fb9a1f311d3b69fce84 (from https://www.piwheels.org/simple/squidpy/) 2022-05-14T19:01:10,861 Skipping link: not a file: https://www.piwheels.org/simple/squidpy/ 2022-05-14T19:01:10,861 Skipping link: not a file: https://pypi.org/simple/squidpy/ 2022-05-14T19:01:10,908 Given no hashes to check 1 links for project 'squidpy': discarding no candidates 2022-05-14T19:01:10,950 Collecting squidpy==1.2.1 2022-05-14T19:01:10,955 Created temporary directory: /tmp/pip-unpack-2hbncsar 2022-05-14T19:01:11,049 Downloading squidpy-1.2.1.tar.gz (159 kB) 2022-05-14T19:01:11,566 Added squidpy==1.2.1 from https://files.pythonhosted.org/packages/15/c0/5ec55824f9fa5cf662bbd8b99cc5422afc9331d7147f27896fb782227968/squidpy-1.2.1.tar.gz#sha256=a32609afb16e7f7d1675e3ed4b10bab5c9509a9ab5dae7732fc28b399aaece7b to build tracker '/tmp/pip-req-tracker-w97hbp3p' 2022-05-14T19:01:11,580 Created temporary directory: /tmp/pip-build-env-3x3r_xg8 2022-05-14T19:01:11,600 Created temporary directory: /tmp/pip-standalone-pip-_dh79qqv 2022-05-14T19:01:13,735 Installing build dependencies: started 2022-05-14T19:01:13,737 Running command pip subprocess to install build dependencies 2022-05-14T19:01:25,519 Using pip 22.0.4 from /tmp/pip-standalone-pip-_dh79qqv/__env_pip__.zip/pip (python 3.9) 2022-05-14T19:01:27,131 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-05-14T19:01:31,292 Collecting setuptools 2022-05-14T19:01:31,553 Using cached https://www.piwheels.org/simple/setuptools/setuptools-62.2.0-py3-none-any.whl (1.1 MB) 2022-05-14T19:01:32,515 Collecting setuptools_scm 2022-05-14T19:01:32,557 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-6.4.2-py3-none-any.whl (37 kB) 2022-05-14T19:01:33,037 Collecting packaging>=20.0 2022-05-14T19:01:33,072 Using cached https://www.piwheels.org/simple/packaging/packaging-21.3-py3-none-any.whl (40 kB) 2022-05-14T19:01:33,356 Collecting tomli>=1.0.0 2022-05-14T19:01:33,386 Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB) 2022-05-14T19:01:34,072 Collecting pyparsing!=3.0.5,>=2.0.2 2022-05-14T19:01:34,110 Using cached https://www.piwheels.org/simple/pyparsing/pyparsing-3.0.9-py3-none-any.whl (98 kB) 2022-05-14T19:01:40,844 Installing collected packages: tomli, setuptools, pyparsing, packaging, setuptools_scm 2022-05-14T19:01:46,758 Successfully installed packaging-21.3 pyparsing-3.0.9 setuptools-62.2.0 setuptools_scm-6.4.2 tomli-2.0.1 2022-05-14T19:01:47,482 Installing build dependencies: finished with status 'done' 2022-05-14T19:01:47,508 Getting requirements to build wheel: started 2022-05-14T19:01:47,510 Running command Getting requirements to build wheel 2022-05-14T19:01:48,839 Traceback (most recent call last): 2022-05-14T19:01:48,841 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 363, in 2022-05-14T19:01:48,841 main() 2022-05-14T19:01:48,842 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 345, in main 2022-05-14T19:01:48,842 json_out['return_val'] = hook(**hook_input['kwargs']) 2022-05-14T19:01:48,842 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py", line 130, in get_requires_for_build_wheel 2022-05-14T19:01:48,843 return hook(config_settings) 2022-05-14T19:01:48,843 File "/usr/local/lib/python3.9/dist-packages/setuptools/build_meta.py", line 162, in get_requires_for_build_wheel 2022-05-14T19:01:48,844 return self._get_build_requires( 2022-05-14T19:01:48,844 File "/usr/local/lib/python3.9/dist-packages/setuptools/build_meta.py", line 143, in _get_build_requires 2022-05-14T19:01:48,844 self.run_setup() 2022-05-14T19:01:48,845 File "/usr/local/lib/python3.9/dist-packages/setuptools/build_meta.py", line 158, in run_setup 2022-05-14T19:01:48,845 exec(compile(code, __file__, 'exec'), locals()) 2022-05-14T19:01:48,846 File "setup.py", line 44, in 2022-05-14T19:01:48,846 for l in (Path("docs") / "requirements.txt").read_text("utf-8").splitlines() 2022-05-14T19:01:48,847 File "/usr/lib/python3.9/pathlib.py", line 1255, in read_text 2022-05-14T19:01:48,848 with self.open(mode='r', encoding=encoding, errors=errors) as f: 2022-05-14T19:01:48,849 File "/usr/lib/python3.9/pathlib.py", line 1241, in open 2022-05-14T19:01:48,851 return io.open(self, mode, buffering, encoding, errors, newline, 2022-05-14T19:01:48,851 File "/usr/lib/python3.9/pathlib.py", line 1109, in _opener 2022-05-14T19:01:48,853 return self._accessor.open(self, flags, mode) 2022-05-14T19:01:48,853 FileNotFoundError: [Errno 2] No such file or directory: 'docs/requirements.txt' 2022-05-14T19:01:48,945 ERROR: [present-diagnostic] Getting requirements to build wheel exited with 1 2022-05-14T19:01:48,986 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/in_process/_in_process.py get_requires_for_build_wheel /tmp/tmp233ntpqc[/] 2022-05-14T19:01:48,986 [bold magenta]cwd[/]: /tmp/pip-wheel-cqtkb8cf/squidpy_940fac3d0ad342a5aab50ead76488e3a 2022-05-14T19:01:48,987 Getting requirements to build wheel: finished with status 'error' 2022-05-14T19:01:48,992 ERROR: [present-diagnostic] Getting requirements to build wheel exited with 1 2022-05-14T19:01:49,007 Exception information: 2022-05-14T19:01:49,007 Traceback (most recent call last): 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/base_command.py", line 167, in exc_logging_wrapper 2022-05-14T19:01:49,007 status = run_func(*args) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/cli/req_command.py", line 205, in wrapper 2022-05-14T19:01:49,007 return func(self, options, args) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/commands/wheel.py", line 145, in run 2022-05-14T19:01:49,007 requirement_set = resolver.resolve(reqs, check_supported_wheels=True) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 94, in resolve 2022-05-14T19:01:49,007 result = self._result = resolver.resolve( 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 481, in resolve 2022-05-14T19:01:49,007 state = resolution.resolve(requirements, max_rounds=max_rounds) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 348, in resolve 2022-05-14T19:01:49,007 self._add_to_criteria(self.state.criteria, r, parent=None) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 172, in _add_to_criteria 2022-05-14T19:01:49,007 if not criterion.candidates: 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/resolvelib/structs.py", line 151, in __bool__ 2022-05-14T19:01:49,007 return bool(self._sequence) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__ 2022-05-14T19:01:49,007 return any(self) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in 2022-05-14T19:01:49,007 return (c for c in iterator if id(c) not in self._incompatible_ids) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built 2022-05-14T19:01:49,007 candidate = func() 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 215, in _make_candidate_from_link 2022-05-14T19:01:49,007 self._link_candidate_cache[link] = LinkCandidate( 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 288, in __init__ 2022-05-14T19:01:49,007 super().__init__( 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 158, in __init__ 2022-05-14T19:01:49,007 self.dist = self._prepare() 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 227, in _prepare 2022-05-14T19:01:49,007 dist = self._prepare_distribution() 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 299, in _prepare_distribution 2022-05-14T19:01:49,007 return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 487, in prepare_linked_requirement 2022-05-14T19:01:49,007 return self._prepare_linked_requirement(req, parallel_builds) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 556, in _prepare_linked_requirement 2022-05-14T19:01:49,007 dist = _get_prepared_distribution( 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/operations/prepare.py", line 58, in _get_prepared_distribution 2022-05-14T19:01:49,007 abstract_dist.prepare_distribution_metadata(finder, build_isolation) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 45, in prepare_distribution_metadata 2022-05-14T19:01:49,007 self._install_build_reqs(finder) 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 104, in _install_build_reqs 2022-05-14T19:01:49,007 build_reqs = self._get_build_requires_wheel() 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/distributions/sdist.py", line 81, in _get_build_requires_wheel 2022-05-14T19:01:49,007 return backend.get_requires_for_build_wheel() 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/wrappers.py", line 172, in get_requires_for_build_wheel 2022-05-14T19:01:49,007 return self._call_hook('get_requires_for_build_wheel', { 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_vendor/pep517/wrappers.py", line 322, in _call_hook 2022-05-14T19:01:49,007 self._subprocess_runner( 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/subprocess.py", line 252, in runner 2022-05-14T19:01:49,007 call_subprocess( 2022-05-14T19:01:49,007 File "/usr/local/lib/python3.9/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess 2022-05-14T19:01:49,007 raise error 2022-05-14T19:01:49,007 pip._internal.exceptions.InstallationSubprocessError: Getting requirements to build wheel exited with 1 2022-05-14T19:01:49,027 Removed squidpy==1.2.1 from https://files.pythonhosted.org/packages/15/c0/5ec55824f9fa5cf662bbd8b99cc5422afc9331d7147f27896fb782227968/squidpy-1.2.1.tar.gz#sha256=a32609afb16e7f7d1675e3ed4b10bab5c9509a9ab5dae7732fc28b399aaece7b from build tracker '/tmp/pip-req-tracker-w97hbp3p' 2022-05-14T19:01:49,029 Removed build tracker: '/tmp/pip-req-tracker-w97hbp3p'