2022-07-04T20:52:57,379 Created temporary directory: /tmp/pip-ephem-wheel-cache-ic2ra1bh 2022-07-04T20:52:57,384 Created temporary directory: /tmp/pip-build-tracker-k5iu90pg 2022-07-04T20:52:57,385 Initialized build tracking at /tmp/pip-build-tracker-k5iu90pg 2022-07-04T20:52:57,385 Created build tracker: /tmp/pip-build-tracker-k5iu90pg 2022-07-04T20:52:57,386 Entered build tracker: /tmp/pip-build-tracker-k5iu90pg 2022-07-04T20:52:57,387 Created temporary directory: /tmp/pip-wheel-gn9h50d6 2022-07-04T20:52:57,456 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-07-04T20:52:57,465 2 location(s) to search for versions of s4-clarity: 2022-07-04T20:52:57,465 * https://pypi.org/simple/s4-clarity/ 2022-07-04T20:52:57,465 * https://www.piwheels.org/simple/s4-clarity/ 2022-07-04T20:52:57,466 Fetching project page and analyzing links: https://pypi.org/simple/s4-clarity/ 2022-07-04T20:52:57,468 Getting page https://pypi.org/simple/s4-clarity/ 2022-07-04T20:52:57,471 Found index url https://pypi.org/simple 2022-07-04T20:52:58,117 Found link https://files.pythonhosted.org/packages/ca/a6/15811ae2d49be55805eb68370bb82b9f6311d7ca6a782586d73aa2c4b160/s4-clarity-1.0.0.tar.gz#sha256=c503db8bb772a3e0fee8b64d203fe81f892b8abcd38ffd9eda17e02e14e6fbb8 (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7), version: 1.0.0 2022-07-04T20:52:58,118 Skipping link: No binaries permitted for s4-clarity: https://files.pythonhosted.org/packages/40/e7/f35bdd4be47093ab1f121ccd10def5d947e6336cbe0aa4f9dceb6ca64527/s4_clarity-1.0.0-py2.py3-none-any.whl#sha256=a1614f912db7b25405378b6c5813693d1a7db1781d77030370e234890b508800 (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7) 2022-07-04T20:52:58,119 Found link https://files.pythonhosted.org/packages/62/17/7f979ad240a007471c28cb3276afdbf3946c12ac67946475a87d54167359/s4-clarity-1.1.0.tar.gz#sha256=6352f5f2df91a3f7fa2b0997e0729c01342033e36624aa3b5fa3eddcddd55d1f (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7), version: 1.1.0 2022-07-04T20:52:58,120 Skipping link: No binaries permitted for s4-clarity: https://files.pythonhosted.org/packages/66/43/7d2e646026ad872031accae960912aa55c403cf22cc318f1f4c63ec553f6/s4_clarity-1.1.0-py2.py3-none-any.whl#sha256=308bc5fb7a88a7edfc147ebf8481d4e38616db9066133af7c29449bbce79f82d (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7) 2022-07-04T20:52:58,121 Found link https://files.pythonhosted.org/packages/ed/e2/fb8982641b82d85e1c4452c7c23b5d0437f8a74db8fdcca930a36f4d7c8d/s4-clarity-1.1.1.tar.gz#sha256=7ae17064f80aefd6469ccd75c235af61e6bc9a7e6f2dc9d5918edc88907788cd (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7), version: 1.1.1 2022-07-04T20:52:58,122 Skipping link: No binaries permitted for s4-clarity: https://files.pythonhosted.org/packages/79/55/27c006c584837c96b0ca9e92554a136a2fb0a6008f135255974f881dcbc9/s4_clarity-1.1.1-py2.py3-none-any.whl#sha256=bfefccc15c9657c25823896bffc2b82e5300da97f2209b73f5d1a4f197a06a22 (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7) 2022-07-04T20:52:58,124 Found link https://files.pythonhosted.org/packages/49/2e/c096956347d840ec8912fe92b3280d7a4a476f957fff39e89d568a41343b/s4-clarity-1.2.0.tar.gz#sha256=09ef027e11186fc968e239239da0f61225c14203be19c1142195ff65fc1256b5 (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7), version: 1.2.0 2022-07-04T20:52:58,124 Skipping link: No binaries permitted for s4-clarity: https://files.pythonhosted.org/packages/cb/a9/429de0c2b424f4e6aedb691f5ccd48071a28d684e935e5945a79759066cc/s4_clarity-1.2.0-py2.py3-none-any.whl#sha256=c1bb5beb2dcf13b7c05a5a10dfcdb94c12448b72ef7f35b956b7aff61cc7f538 (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7) 2022-07-04T20:52:58,126 Found link https://files.pythonhosted.org/packages/39/0d/5485d7617dd139ad24503782ac60b68b3a028a4c7b8a264be0e8d0a4a003/s4-clarity-1.3.0.tar.gz#sha256=6467dbf492cb8fbc4c3de3999cbeb5a6d9fb0e722c9b9f9b77f7799bf2d31ad1 (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7), version: 1.3.0 2022-07-04T20:52:58,126 Skipping link: No binaries permitted for s4-clarity: https://files.pythonhosted.org/packages/22/95/3c8c96db916cf24fd50d55b8cf077f90f75ad6feaf044ddf728ee6ee4bfe/s4_clarity-1.3.0-py2.py3-none-any.whl#sha256=33d67bff950605cc074a1b04cfd4de4b2d85e654ae12ee77a8025bbdfecd100c (from https://pypi.org/simple/s4-clarity/) (requires-python:>=2.7) 2022-07-04T20:52:58,127 Fetching project page and analyzing links: https://www.piwheels.org/simple/s4-clarity/ 2022-07-04T20:52:58,128 Getting page https://www.piwheels.org/simple/s4-clarity/ 2022-07-04T20:52:58,130 Found index url https://www.piwheels.org/simple 2022-07-04T20:52:58,569 Skipping link: No binaries permitted for s4-clarity: https://www.piwheels.org/simple/s4-clarity/s4_clarity-1.2.0-py2.py3-none-any.whl#sha256=c1bb5beb2dcf13b7c05a5a10dfcdb94c12448b72ef7f35b956b7aff61cc7f538 (from https://www.piwheels.org/simple/s4-clarity/) (requires-python:>=2.7) 2022-07-04T20:52:58,570 Skipping link: No binaries permitted for s4-clarity: https://www.piwheels.org/simple/s4-clarity/s4_clarity-1.1.1-py2.py3-none-any.whl#sha256=bfefccc15c9657c25823896bffc2b82e5300da97f2209b73f5d1a4f197a06a22 (from https://www.piwheels.org/simple/s4-clarity/) (requires-python:>=2.7) 2022-07-04T20:52:58,570 Skipping link: No binaries permitted for s4-clarity: https://www.piwheels.org/simple/s4-clarity/s4_clarity-1.1.0-py2.py3-none-any.whl#sha256=308bc5fb7a88a7edfc147ebf8481d4e38616db9066133af7c29449bbce79f82d (from https://www.piwheels.org/simple/s4-clarity/) (requires-python:>=2.7) 2022-07-04T20:52:58,571 Skipping link: No binaries permitted for s4-clarity: https://www.piwheels.org/simple/s4-clarity/s4_clarity-1.0.0-py2.py3-none-any.whl#sha256=a1614f912db7b25405378b6c5813693d1a7db1781d77030370e234890b508800 (from https://www.piwheels.org/simple/s4-clarity/) (requires-python:>=2.7) 2022-07-04T20:52:58,572 Skipping link: not a file: https://www.piwheels.org/simple/s4-clarity/ 2022-07-04T20:52:58,572 Skipping link: not a file: https://pypi.org/simple/s4-clarity/ 2022-07-04T20:52:58,607 Given no hashes to check 1 links for project 's4-clarity': discarding no candidates 2022-07-04T20:52:58,638 Collecting s4-clarity==1.3.0 2022-07-04T20:52:58,642 Created temporary directory: /tmp/pip-unpack-v_zi3t4k 2022-07-04T20:52:58,921 Downloading s4-clarity-1.3.0.tar.gz (68 kB) 2022-07-04T20:52:59,279 Added s4-clarity==1.3.0 from https://files.pythonhosted.org/packages/39/0d/5485d7617dd139ad24503782ac60b68b3a028a4c7b8a264be0e8d0a4a003/s4-clarity-1.3.0.tar.gz#sha256=6467dbf492cb8fbc4c3de3999cbeb5a6d9fb0e722c9b9f9b77f7799bf2d31ad1 to build tracker '/tmp/pip-build-tracker-k5iu90pg' 2022-07-04T20:52:59,283 Running setup.py (path:/tmp/pip-wheel-gn9h50d6/s4-clarity_ceb769f3abd149e0ba10589f294a8051/setup.py) egg_info for package s4-clarity 2022-07-04T20:52:59,284 Created temporary directory: /tmp/pip-pip-egg-info-2x0c3mij 2022-07-04T20:52:59,285 Preparing metadata (setup.py): started 2022-07-04T20:52:59,287 Running command python setup.py egg_info 2022-07-04T20:53:06,663 running egg_info 2022-07-04T20:53:06,668 creating /tmp/pip-pip-egg-info-2x0c3mij/s4_clarity.egg-info 2022-07-04T20:53:07,316 writing /tmp/pip-pip-egg-info-2x0c3mij/s4_clarity.egg-info/PKG-INFO 2022-07-04T20:53:07,910 writing dependency_links to /tmp/pip-pip-egg-info-2x0c3mij/s4_clarity.egg-info/dependency_links.txt 2022-07-04T20:53:10,866 writing requirements to /tmp/pip-pip-egg-info-2x0c3mij/s4_clarity.egg-info/requires.txt 2022-07-04T20:53:11,460 writing top-level names to /tmp/pip-pip-egg-info-2x0c3mij/s4_clarity.egg-info/top_level.txt 2022-07-04T20:53:11,463 writing manifest file '/tmp/pip-pip-egg-info-2x0c3mij/s4_clarity.egg-info/SOURCES.txt' 2022-07-04T20:53:12,270 reading manifest file '/tmp/pip-pip-egg-info-2x0c3mij/s4_clarity.egg-info/SOURCES.txt' 2022-07-04T20:53:12,273 adding license file 'LICENSE' 2022-07-04T20:53:12,283 writing manifest file '/tmp/pip-pip-egg-info-2x0c3mij/s4_clarity.egg-info/SOURCES.txt' 2022-07-04T20:53:12,285 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-07-04T20:53:12,286 warnings.warn(msg, warning_class) 2022-07-04T20:53:12,499 Preparing metadata (setup.py): finished with status 'done' 2022-07-04T20:53:12,510 Source in /tmp/pip-wheel-gn9h50d6/s4-clarity_ceb769f3abd149e0ba10589f294a8051 has version 1.3.0, which satisfies requirement s4-clarity==1.3.0 from https://files.pythonhosted.org/packages/39/0d/5485d7617dd139ad24503782ac60b68b3a028a4c7b8a264be0e8d0a4a003/s4-clarity-1.3.0.tar.gz#sha256=6467dbf492cb8fbc4c3de3999cbeb5a6d9fb0e722c9b9f9b77f7799bf2d31ad1 2022-07-04T20:53:12,512 Removed s4-clarity==1.3.0 from https://files.pythonhosted.org/packages/39/0d/5485d7617dd139ad24503782ac60b68b3a028a4c7b8a264be0e8d0a4a003/s4-clarity-1.3.0.tar.gz#sha256=6467dbf492cb8fbc4c3de3999cbeb5a6d9fb0e722c9b9f9b77f7799bf2d31ad1 from build tracker '/tmp/pip-build-tracker-k5iu90pg' 2022-07-04T20:53:12,526 Created temporary directory: /tmp/pip-unpack-t45dt85f 2022-07-04T20:53:12,527 Building wheels for collected packages: s4-clarity 2022-07-04T20:53:12,537 Created temporary directory: /tmp/pip-wheel-b15z4tpj 2022-07-04T20:53:12,538 Building wheel for s4-clarity (setup.py): started 2022-07-04T20:53:12,540 Destination directory: /tmp/pip-wheel-b15z4tpj 2022-07-04T20:53:12,540 Running command python setup.py bdist_wheel 2022-07-04T20:53:14,678 /usr/local/lib/python3.7/dist-packages/setuptools/config/setupcfg.py:459: SetuptoolsDeprecationWarning: The license_file parameter is deprecated, use license_files instead. 2022-07-04T20:53:14,680 warnings.warn(msg, warning_class) 2022-07-04T20:53:19,235 running bdist_wheel 2022-07-04T20:53:19,410 running build 2022-07-04T20:53:19,410 running build_py 2022-07-04T20:53:20,072 creating build 2022-07-04T20:53:20,072 creating build/lib 2022-07-04T20:53:20,073 creating build/lib/s4 2022-07-04T20:53:20,075 copying s4/__init__.py -> build/lib/s4 2022-07-04T20:53:20,083 creating build/lib/s4/clarity 2022-07-04T20:53:20,085 copying s4/clarity/reagent_type.py -> build/lib/s4/clarity 2022-07-04T20:53:20,088 copying s4/clarity/step.py -> build/lib/s4/clarity 2022-07-04T20:53:20,093 copying s4/clarity/__init__.py -> build/lib/s4/clarity 2022-07-04T20:53:20,096 copying s4/clarity/file.py -> build/lib/s4/clarity 2022-07-04T20:53:20,101 copying s4/clarity/reagent_kit.py -> build/lib/s4/clarity 2022-07-04T20:53:20,104 copying s4/clarity/artifact.py -> build/lib/s4/clarity 2022-07-04T20:53:20,109 copying s4/clarity/role.py -> build/lib/s4/clarity 2022-07-04T20:53:20,112 copying s4/clarity/exception.py -> build/lib/s4/clarity 2022-07-04T20:53:20,116 copying s4/clarity/researcher.py -> build/lib/s4/clarity 2022-07-04T20:53:20,119 copying s4/clarity/process.py -> build/lib/s4/clarity 2022-07-04T20:53:20,122 copying s4/clarity/console.py -> build/lib/s4/clarity 2022-07-04T20:53:20,126 copying s4/clarity/instrument.py -> build/lib/s4/clarity 2022-07-04T20:53:20,129 copying s4/clarity/version.py -> build/lib/s4/clarity 2022-07-04T20:53:20,132 copying s4/clarity/control_type.py -> build/lib/s4/clarity 2022-07-04T20:53:20,136 copying s4/clarity/routing.py -> build/lib/s4/clarity 2022-07-04T20:53:20,140 copying s4/clarity/reagent_lot.py -> build/lib/s4/clarity 2022-07-04T20:53:20,143 copying s4/clarity/lims.py -> build/lib/s4/clarity 2022-07-04T20:53:20,148 copying s4/clarity/project.py -> build/lib/s4/clarity 2022-07-04T20:53:20,151 copying s4/clarity/permission.py -> build/lib/s4/clarity 2022-07-04T20:53:20,155 copying s4/clarity/lab.py -> build/lib/s4/clarity 2022-07-04T20:53:20,158 copying s4/clarity/queue.py -> build/lib/s4/clarity 2022-07-04T20:53:20,162 copying s4/clarity/types.py -> build/lib/s4/clarity 2022-07-04T20:53:20,165 copying s4/clarity/iomaps.py -> build/lib/s4/clarity 2022-07-04T20:53:20,169 copying s4/clarity/sample.py -> build/lib/s4/clarity 2022-07-04T20:53:20,173 copying s4/clarity/container.py -> build/lib/s4/clarity 2022-07-04T20:53:20,180 creating build/lib/s4/clarity/_internal 2022-07-04T20:53:20,182 copying s4/clarity/_internal/element.py -> build/lib/s4/clarity/_internal 2022-07-04T20:53:20,186 copying s4/clarity/_internal/__init__.py -> build/lib/s4/clarity/_internal 2022-07-04T20:53:20,189 copying s4/clarity/_internal/fields.py -> build/lib/s4/clarity/_internal 2022-07-04T20:53:20,194 copying s4/clarity/_internal/props.py -> build/lib/s4/clarity/_internal 2022-07-04T20:53:20,199 copying s4/clarity/_internal/factory.py -> build/lib/s4/clarity/_internal 2022-07-04T20:53:20,204 copying s4/clarity/_internal/stepfactory.py -> build/lib/s4/clarity/_internal 2022-07-04T20:53:20,207 copying s4/clarity/_internal/udffactory.py -> build/lib/s4/clarity/_internal 2022-07-04T20:53:20,210 copying s4/clarity/_internal/lazy_property.py -> build/lib/s4/clarity/_internal 2022-07-04T20:53:20,213 copying s4/clarity/_internal/fakesession.py -> build/lib/s4/clarity/_internal 2022-07-04T20:53:20,219 creating build/lib/s4/clarity/scripts 2022-07-04T20:53:20,220 copying s4/clarity/scripts/__init__.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,223 copying s4/clarity/scripts/epp_output_formatter.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,227 copying s4/clarity/scripts/stepepp.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,231 copying s4/clarity/scripts/shell.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,234 copying s4/clarity/scripts/workflow_test.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,238 copying s4/clarity/scripts/triggered_step_epp.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,241 copying s4/clarity/scripts/file_argument_script.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,244 copying s4/clarity/scripts/derived_sample_automation.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,247 copying s4/clarity/scripts/htmllogging.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,251 copying s4/clarity/scripts/user_message_exception.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,254 copying s4/clarity/scripts/genericscript.py -> build/lib/s4/clarity/scripts 2022-07-04T20:53:20,260 creating build/lib/s4/clarity/utils 2022-07-04T20:53:20,261 copying s4/clarity/utils/date_util.py -> build/lib/s4/clarity/utils 2022-07-04T20:53:20,265 copying s4/clarity/utils/__init__.py -> build/lib/s4/clarity/utils 2022-07-04T20:53:20,268 copying s4/clarity/utils/artifact_ancestry.py -> build/lib/s4/clarity/utils 2022-07-04T20:53:20,272 copying s4/clarity/utils/ssh.py -> build/lib/s4/clarity/utils 2022-07-04T20:53:20,275 copying s4/clarity/utils/sorting_util.py -> build/lib/s4/clarity/utils 2022-07-04T20:53:20,280 creating build/lib/s4/clarity/configuration 2022-07-04T20:53:20,281 copying s4/clarity/configuration/__init__.py -> build/lib/s4/clarity/configuration 2022-07-04T20:53:20,285 copying s4/clarity/configuration/protocol.py -> build/lib/s4/clarity/configuration 2022-07-04T20:53:20,289 copying s4/clarity/configuration/workflow.py -> build/lib/s4/clarity/configuration 2022-07-04T20:53:20,292 copying s4/clarity/configuration/stage.py -> build/lib/s4/clarity/configuration 2022-07-04T20:53:20,296 copying s4/clarity/configuration/process_type.py -> build/lib/s4/clarity/configuration 2022-07-04T20:53:20,299 copying s4/clarity/configuration/udf.py -> build/lib/s4/clarity/configuration 2022-07-04T20:53:20,305 creating build/lib/s4/clarity/steputils 2022-07-04T20:53:20,306 copying s4/clarity/steputils/__init__.py -> build/lib/s4/clarity/steputils 2022-07-04T20:53:20,309 copying s4/clarity/steputils/actions.py -> build/lib/s4/clarity/steputils 2022-07-04T20:53:20,313 copying s4/clarity/steputils/step_average_utils.py -> build/lib/s4/clarity/steputils 2022-07-04T20:53:20,317 copying s4/clarity/steputils/step_runner.py -> build/lib/s4/clarity/steputils 2022-07-04T20:53:20,321 copying s4/clarity/steputils/placement_utils.py -> build/lib/s4/clarity/steputils 2022-07-04T20:53:20,325 copying s4/clarity/steputils/file_utils.py -> build/lib/s4/clarity/steputils 2022-07-04T20:53:20,328 copying s4/clarity/steputils/copyudfs.py -> build/lib/s4/clarity/steputils 2022-07-04T20:53:21,008 /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-07-04T20:53:21,008 setuptools.SetuptoolsDeprecationWarning, 2022-07-04T20:53:21,664 installing to build/bdist.linux-armv7l/wheel 2022-07-04T20:53:21,664 running install 2022-07-04T20:53:21,727 running install_lib 2022-07-04T20:53:22,386 creating build/bdist.linux-armv7l 2022-07-04T20:53:22,386 creating build/bdist.linux-armv7l/wheel 2022-07-04T20:53:22,390 creating build/bdist.linux-armv7l/wheel/s4 2022-07-04T20:53:22,391 copying build/lib/s4/__init__.py -> build/bdist.linux-armv7l/wheel/s4 2022-07-04T20:53:22,397 creating build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,400 creating build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,402 copying build/lib/s4/clarity/_internal/element.py -> build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,406 copying build/lib/s4/clarity/_internal/__init__.py -> build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,410 copying build/lib/s4/clarity/_internal/fields.py -> build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,414 copying build/lib/s4/clarity/_internal/props.py -> build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,419 copying build/lib/s4/clarity/_internal/factory.py -> build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,424 copying build/lib/s4/clarity/_internal/stepfactory.py -> build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,427 copying build/lib/s4/clarity/_internal/udffactory.py -> build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,431 copying build/lib/s4/clarity/_internal/lazy_property.py -> build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,434 copying build/lib/s4/clarity/_internal/fakesession.py -> build/bdist.linux-armv7l/wheel/s4/clarity/_internal 2022-07-04T20:53:22,438 copying build/lib/s4/clarity/reagent_type.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,441 copying build/lib/s4/clarity/step.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,446 copying build/lib/s4/clarity/__init__.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,450 copying build/lib/s4/clarity/file.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,454 copying build/lib/s4/clarity/reagent_kit.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,457 copying build/lib/s4/clarity/artifact.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,463 creating build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,465 copying build/lib/s4/clarity/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,468 copying build/lib/s4/clarity/scripts/epp_output_formatter.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,472 copying build/lib/s4/clarity/scripts/stepepp.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,476 copying build/lib/s4/clarity/scripts/shell.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,479 copying build/lib/s4/clarity/scripts/workflow_test.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,483 copying build/lib/s4/clarity/scripts/triggered_step_epp.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,487 copying build/lib/s4/clarity/scripts/file_argument_script.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,499 copying build/lib/s4/clarity/scripts/derived_sample_automation.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,503 copying build/lib/s4/clarity/scripts/htmllogging.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,506 copying build/lib/s4/clarity/scripts/user_message_exception.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,509 copying build/lib/s4/clarity/scripts/genericscript.py -> build/bdist.linux-armv7l/wheel/s4/clarity/scripts 2022-07-04T20:53:22,513 copying build/lib/s4/clarity/role.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,516 copying build/lib/s4/clarity/exception.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,519 copying build/lib/s4/clarity/researcher.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,522 copying build/lib/s4/clarity/process.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,526 copying build/lib/s4/clarity/console.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,530 creating build/bdist.linux-armv7l/wheel/s4/clarity/utils 2022-07-04T20:53:22,531 copying build/lib/s4/clarity/utils/date_util.py -> build/bdist.linux-armv7l/wheel/s4/clarity/utils 2022-07-04T20:53:22,534 copying build/lib/s4/clarity/utils/__init__.py -> build/bdist.linux-armv7l/wheel/s4/clarity/utils 2022-07-04T20:53:22,538 copying build/lib/s4/clarity/utils/artifact_ancestry.py -> build/bdist.linux-armv7l/wheel/s4/clarity/utils 2022-07-04T20:53:22,541 copying build/lib/s4/clarity/utils/ssh.py -> build/bdist.linux-armv7l/wheel/s4/clarity/utils 2022-07-04T20:53:22,545 copying build/lib/s4/clarity/utils/sorting_util.py -> build/bdist.linux-armv7l/wheel/s4/clarity/utils 2022-07-04T20:53:22,549 creating build/bdist.linux-armv7l/wheel/s4/clarity/configuration 2022-07-04T20:53:22,551 copying build/lib/s4/clarity/configuration/__init__.py -> build/bdist.linux-armv7l/wheel/s4/clarity/configuration 2022-07-04T20:53:22,554 copying build/lib/s4/clarity/configuration/protocol.py -> build/bdist.linux-armv7l/wheel/s4/clarity/configuration 2022-07-04T20:53:22,558 copying build/lib/s4/clarity/configuration/workflow.py -> build/bdist.linux-armv7l/wheel/s4/clarity/configuration 2022-07-04T20:53:22,562 copying build/lib/s4/clarity/configuration/stage.py -> build/bdist.linux-armv7l/wheel/s4/clarity/configuration 2022-07-04T20:53:22,565 copying build/lib/s4/clarity/configuration/process_type.py -> build/bdist.linux-armv7l/wheel/s4/clarity/configuration 2022-07-04T20:53:22,569 copying build/lib/s4/clarity/configuration/udf.py -> build/bdist.linux-armv7l/wheel/s4/clarity/configuration 2022-07-04T20:53:22,572 copying build/lib/s4/clarity/instrument.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,576 copying build/lib/s4/clarity/version.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,579 copying build/lib/s4/clarity/control_type.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,582 copying build/lib/s4/clarity/routing.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,586 copying build/lib/s4/clarity/reagent_lot.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,589 copying build/lib/s4/clarity/lims.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,594 copying build/lib/s4/clarity/project.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,597 copying build/lib/s4/clarity/permission.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,600 copying build/lib/s4/clarity/lab.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,603 copying build/lib/s4/clarity/queue.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,606 copying build/lib/s4/clarity/types.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,611 creating build/bdist.linux-armv7l/wheel/s4/clarity/steputils 2022-07-04T20:53:22,612 copying build/lib/s4/clarity/steputils/__init__.py -> build/bdist.linux-armv7l/wheel/s4/clarity/steputils 2022-07-04T20:53:22,616 copying build/lib/s4/clarity/steputils/actions.py -> build/bdist.linux-armv7l/wheel/s4/clarity/steputils 2022-07-04T20:53:22,620 copying build/lib/s4/clarity/steputils/step_average_utils.py -> build/bdist.linux-armv7l/wheel/s4/clarity/steputils 2022-07-04T20:53:22,623 copying build/lib/s4/clarity/steputils/step_runner.py -> build/bdist.linux-armv7l/wheel/s4/clarity/steputils 2022-07-04T20:53:22,628 copying build/lib/s4/clarity/steputils/placement_utils.py -> build/bdist.linux-armv7l/wheel/s4/clarity/steputils 2022-07-04T20:53:22,631 copying build/lib/s4/clarity/steputils/file_utils.py -> build/bdist.linux-armv7l/wheel/s4/clarity/steputils 2022-07-04T20:53:22,634 copying build/lib/s4/clarity/steputils/copyudfs.py -> build/bdist.linux-armv7l/wheel/s4/clarity/steputils 2022-07-04T20:53:22,638 copying build/lib/s4/clarity/iomaps.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,642 copying build/lib/s4/clarity/sample.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,645 copying build/lib/s4/clarity/container.py -> build/bdist.linux-armv7l/wheel/s4/clarity 2022-07-04T20:53:22,648 running install_egg_info 2022-07-04T20:53:23,991 running egg_info 2022-07-04T20:53:24,641 writing s4_clarity.egg-info/PKG-INFO 2022-07-04T20:53:25,234 writing dependency_links to s4_clarity.egg-info/dependency_links.txt 2022-07-04T20:53:28,253 writing requirements to s4_clarity.egg-info/requires.txt 2022-07-04T20:53:28,848 writing top-level names to s4_clarity.egg-info/top_level.txt 2022-07-04T20:53:28,928 reading manifest file 's4_clarity.egg-info/SOURCES.txt' 2022-07-04T20:53:28,935 adding license file 'LICENSE' 2022-07-04T20:53:28,947 writing manifest file 's4_clarity.egg-info/SOURCES.txt' 2022-07-04T20:53:28,950 Copying s4_clarity.egg-info to build/bdist.linux-armv7l/wheel/s4_clarity-1.3.0-py3.7.egg-info 2022-07-04T20:53:28,970 running install_scripts 2022-07-04T20:53:29,124 creating build/bdist.linux-armv7l/wheel/s4_clarity-1.3.0.dist-info/WHEEL 2022-07-04T20:53:29,129 creating '/tmp/pip-wheel-b15z4tpj/s4_clarity-1.3.0-py2.py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-07-04T20:53:29,133 adding 's4/__init__.py' 2022-07-04T20:53:29,138 adding 's4/clarity/__init__.py' 2022-07-04T20:53:29,142 adding 's4/clarity/artifact.py' 2022-07-04T20:53:29,145 adding 's4/clarity/console.py' 2022-07-04T20:53:29,148 adding 's4/clarity/container.py' 2022-07-04T20:53:29,150 adding 's4/clarity/control_type.py' 2022-07-04T20:53:29,152 adding 's4/clarity/exception.py' 2022-07-04T20:53:29,156 adding 's4/clarity/file.py' 2022-07-04T20:53:29,158 adding 's4/clarity/instrument.py' 2022-07-04T20:53:29,161 adding 's4/clarity/iomaps.py' 2022-07-04T20:53:29,164 adding 's4/clarity/lab.py' 2022-07-04T20:53:29,167 adding 's4/clarity/lims.py' 2022-07-04T20:53:29,170 adding 's4/clarity/permission.py' 2022-07-04T20:53:29,172 adding 's4/clarity/process.py' 2022-07-04T20:53:29,175 adding 's4/clarity/project.py' 2022-07-04T20:53:29,177 adding 's4/clarity/queue.py' 2022-07-04T20:53:29,179 adding 's4/clarity/reagent_kit.py' 2022-07-04T20:53:29,181 adding 's4/clarity/reagent_lot.py' 2022-07-04T20:53:29,184 adding 's4/clarity/reagent_type.py' 2022-07-04T20:53:29,186 adding 's4/clarity/researcher.py' 2022-07-04T20:53:29,188 adding 's4/clarity/role.py' 2022-07-04T20:53:29,191 adding 's4/clarity/routing.py' 2022-07-04T20:53:29,193 adding 's4/clarity/sample.py' 2022-07-04T20:53:29,200 adding 's4/clarity/step.py' 2022-07-04T20:53:29,203 adding 's4/clarity/types.py' 2022-07-04T20:53:29,205 adding 's4/clarity/version.py' 2022-07-04T20:53:29,208 adding 's4/clarity/_internal/__init__.py' 2022-07-04T20:53:29,212 adding 's4/clarity/_internal/element.py' 2022-07-04T20:53:29,217 adding 's4/clarity/_internal/factory.py' 2022-07-04T20:53:29,220 adding 's4/clarity/_internal/fakesession.py' 2022-07-04T20:53:29,223 adding 's4/clarity/_internal/fields.py' 2022-07-04T20:53:29,226 adding 's4/clarity/_internal/lazy_property.py' 2022-07-04T20:53:29,233 adding 's4/clarity/_internal/props.py' 2022-07-04T20:53:29,236 adding 's4/clarity/_internal/stepfactory.py' 2022-07-04T20:53:29,238 adding 's4/clarity/_internal/udffactory.py' 2022-07-04T20:53:29,242 adding 's4/clarity/configuration/__init__.py' 2022-07-04T20:53:29,244 adding 's4/clarity/configuration/process_type.py' 2022-07-04T20:53:29,247 adding 's4/clarity/configuration/protocol.py' 2022-07-04T20:53:29,249 adding 's4/clarity/configuration/stage.py' 2022-07-04T20:53:29,252 adding 's4/clarity/configuration/udf.py' 2022-07-04T20:53:29,255 adding 's4/clarity/configuration/workflow.py' 2022-07-04T20:53:29,258 adding 's4/clarity/scripts/__init__.py' 2022-07-04T20:53:29,261 adding 's4/clarity/scripts/derived_sample_automation.py' 2022-07-04T20:53:29,268 adding 's4/clarity/scripts/epp_output_formatter.py' 2022-07-04T20:53:29,271 adding 's4/clarity/scripts/file_argument_script.py' 2022-07-04T20:53:29,275 adding 's4/clarity/scripts/genericscript.py' 2022-07-04T20:53:29,278 adding 's4/clarity/scripts/htmllogging.py' 2022-07-04T20:53:29,281 adding 's4/clarity/scripts/shell.py' 2022-07-04T20:53:29,284 adding 's4/clarity/scripts/stepepp.py' 2022-07-04T20:53:29,287 adding 's4/clarity/scripts/triggered_step_epp.py' 2022-07-04T20:53:29,289 adding 's4/clarity/scripts/user_message_exception.py' 2022-07-04T20:53:29,291 adding 's4/clarity/scripts/workflow_test.py' 2022-07-04T20:53:29,294 adding 's4/clarity/steputils/__init__.py' 2022-07-04T20:53:29,298 adding 's4/clarity/steputils/actions.py' 2022-07-04T20:53:29,301 adding 's4/clarity/steputils/copyudfs.py' 2022-07-04T20:53:29,303 adding 's4/clarity/steputils/file_utils.py' 2022-07-04T20:53:29,306 adding 's4/clarity/steputils/placement_utils.py' 2022-07-04T20:53:29,308 adding 's4/clarity/steputils/step_average_utils.py' 2022-07-04T20:53:29,315 adding 's4/clarity/steputils/step_runner.py' 2022-07-04T20:53:29,319 adding 's4/clarity/utils/__init__.py' 2022-07-04T20:53:29,322 adding 's4/clarity/utils/artifact_ancestry.py' 2022-07-04T20:53:29,325 adding 's4/clarity/utils/date_util.py' 2022-07-04T20:53:29,327 adding 's4/clarity/utils/sorting_util.py' 2022-07-04T20:53:29,329 adding 's4/clarity/utils/ssh.py' 2022-07-04T20:53:29,333 adding 's4_clarity-1.3.0.dist-info/LICENSE' 2022-07-04T20:53:29,336 adding 's4_clarity-1.3.0.dist-info/METADATA' 2022-07-04T20:53:29,337 adding 's4_clarity-1.3.0.dist-info/WHEEL' 2022-07-04T20:53:29,339 adding 's4_clarity-1.3.0.dist-info/top_level.txt' 2022-07-04T20:53:29,341 adding 's4_clarity-1.3.0.dist-info/RECORD' 2022-07-04T20:53:29,348 removing build/bdist.linux-armv7l/wheel 2022-07-04T20:53:29,619 Building wheel for s4-clarity (setup.py): finished with status 'done' 2022-07-04T20:53:29,629 Created wheel for s4-clarity: filename=s4_clarity-1.3.0-py2.py3-none-any.whl size=91410 sha256=1ce964f77b2d82c8da3fddd2e912a9a9fd55dede16dbd54a3cf5e64526876325 2022-07-04T20:53:29,631 Stored in directory: /tmp/pip-ephem-wheel-cache-ic2ra1bh/wheels/d5/21/75/1d93e964e51b442fc7aa68d8fc03ba22c8885c0472898ad217 2022-07-04T20:53:29,659 Successfully built s4-clarity 2022-07-04T20:53:29,673 Removed build tracker: '/tmp/pip-build-tracker-k5iu90pg'