2022-11-15T04:10:21,651 Created temporary directory: /tmp/pip-ephem-wheel-cache-s44zcs_l
2022-11-15T04:10:21,655 Created temporary directory: /tmp/pip-build-tracker-ct1mq8dr
2022-11-15T04:10:21,656 Initialized build tracking at /tmp/pip-build-tracker-ct1mq8dr
2022-11-15T04:10:21,657 Created build tracker: /tmp/pip-build-tracker-ct1mq8dr
2022-11-15T04:10:21,657 Entered build tracker: /tmp/pip-build-tracker-ct1mq8dr
2022-11-15T04:10:21,658 Created temporary directory: /tmp/pip-wheel-cgeat6bc
2022-11-15T04:10:21,666 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2022-11-15T04:10:21,671 Created temporary directory: /tmp/pip-ephem-wheel-cache-7s4pjkbh
2022-11-15T04:10:21,722 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2022-11-15T04:10:21,730 2 location(s) to search for versions of choppy-pipe:
2022-11-15T04:10:21,730 * https://pypi.org/simple/choppy-pipe/
2022-11-15T04:10:21,730 * https://www.piwheels.org/simple/choppy-pipe/
2022-11-15T04:10:21,731 Fetching project page and analyzing links: https://pypi.org/simple/choppy-pipe/
2022-11-15T04:10:21,732 Getting page https://pypi.org/simple/choppy-pipe/
2022-11-15T04:10:21,735 Found index url https://pypi.org/simple
2022-11-15T04:10:22,048 Fetched page https://pypi.org/simple/choppy-pipe/ as application/vnd.pypi.simple.v1+json
2022-11-15T04:10:22,051   Found link https://files.pythonhosted.org/packages/d2/dd/c751af2dc8974481f9bdd49c014cd54fee2cf40f085d540e661d17b11e8a/choppy-pipe-0.3.8.dev1.tar.gz (from https://pypi.org/simple/choppy-pipe/), version: 0.3.8.dev1
2022-11-15T04:10:22,052   Found link https://files.pythonhosted.org/packages/48/af/c7da3867c17e6b307df79d22049073ccc16d53576438ae07db62aff68a7d/choppy-pipe-0.3.9.dev0.tar.gz (from https://pypi.org/simple/choppy-pipe/), version: 0.3.9.dev0
2022-11-15T04:10:22,053   Found link https://files.pythonhosted.org/packages/34/10/967cacdebf5208faaac1c199de3a7325ebbaf694700d9896d7ed82a0d44c/choppy-pipe-0.3.9.dev1.tar.gz (from https://pypi.org/simple/choppy-pipe/), version: 0.3.9.dev1
2022-11-15T04:10:22,054 Fetching project page and analyzing links: https://www.piwheels.org/simple/choppy-pipe/
2022-11-15T04:10:22,054 Getting page https://www.piwheels.org/simple/choppy-pipe/
2022-11-15T04:10:22,057 Found index url https://www.piwheels.org/simple
2022-11-15T04:10:22,299 Fetched page https://www.piwheels.org/simple/choppy-pipe/ as text/html
2022-11-15T04:10:22,302   Skipping link: No binaries permitted for choppy-pipe: https://www.piwheels.org/simple/choppy-pipe/choppy_pipe-0.3.9.dev0-py3-none-any.whl#sha256=9ba7f0f56abe0da97222c7011e2381906fc8d049e14374975527673323ee737d (from https://www.piwheels.org/simple/choppy-pipe/)
2022-11-15T04:10:22,302 Skipping link: not a file: https://www.piwheels.org/simple/choppy-pipe/
2022-11-15T04:10:22,303 Skipping link: not a file: https://pypi.org/simple/choppy-pipe/
2022-11-15T04:10:22,336 Given no hashes to check 1 links for project 'choppy-pipe': discarding no candidates
2022-11-15T04:10:22,370 Collecting choppy-pipe==0.3.9.dev1
2022-11-15T04:10:22,375   Created temporary directory: /tmp/pip-unpack-rab66osm
2022-11-15T04:10:23,438   Downloading choppy-pipe-0.3.9.dev1.tar.gz (8.3 MB)
2022-11-15T04:10:27,820   Added choppy-pipe==0.3.9.dev1 from https://files.pythonhosted.org/packages/34/10/967cacdebf5208faaac1c199de3a7325ebbaf694700d9896d7ed82a0d44c/choppy-pipe-0.3.9.dev1.tar.gz to build tracker '/tmp/pip-build-tracker-ct1mq8dr'
2022-11-15T04:10:27,824   Running setup.py (path:/tmp/pip-wheel-cgeat6bc/choppy-pipe_0f727b6fcec44adf83386773a4f62a72/setup.py) egg_info for package choppy-pipe
2022-11-15T04:10:27,825   Created temporary directory: /tmp/pip-pip-egg-info-jjnctp9d
2022-11-15T04:10:27,826   Preparing metadata (setup.py): started
2022-11-15T04:10:27,828   Running command python setup.py egg_info
2022-11-15T04:10:30,531   running egg_info
2022-11-15T04:10:30,538   creating /tmp/pip-pip-egg-info-jjnctp9d/choppy_pipe.egg-info
2022-11-15T04:10:30,599   writing /tmp/pip-pip-egg-info-jjnctp9d/choppy_pipe.egg-info/PKG-INFO
2022-11-15T04:10:30,607   writing dependency_links to /tmp/pip-pip-egg-info-jjnctp9d/choppy_pipe.egg-info/dependency_links.txt
2022-11-15T04:10:30,611   writing entry points to /tmp/pip-pip-egg-info-jjnctp9d/choppy_pipe.egg-info/entry_points.txt
2022-11-15T04:10:30,614   writing requirements to /tmp/pip-pip-egg-info-jjnctp9d/choppy_pipe.egg-info/requires.txt
2022-11-15T04:10:30,616   writing top-level names to /tmp/pip-pip-egg-info-jjnctp9d/choppy_pipe.egg-info/top_level.txt
2022-11-15T04:10:30,619   writing manifest file '/tmp/pip-pip-egg-info-jjnctp9d/choppy_pipe.egg-info/SOURCES.txt'
2022-11-15T04:10:30,816   reading manifest file '/tmp/pip-pip-egg-info-jjnctp9d/choppy_pipe.egg-info/SOURCES.txt'
2022-11-15T04:10:30,819   reading manifest template 'MANIFEST.in'
2022-11-15T04:10:30,822   warning: no files found matching 'config.py'
2022-11-15T04:10:30,912   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2022-11-15T04:10:30,913   no previously-included directories found matching 'docs/_build'
2022-11-15T04:10:30,914   adding license file 'LICENSE'
2022-11-15T04:10:30,914   adding license file 'LICENSE.md'
2022-11-15T04:10:30,914   adding license file 'AUTHORS'
2022-11-15T04:10:30,929   writing manifest file '/tmp/pip-pip-egg-info-jjnctp9d/choppy_pipe.egg-info/SOURCES.txt'
2022-11-15T04:10:31,133   Preparing metadata (setup.py): finished with status 'done'
2022-11-15T04:10:31,155   Source in /tmp/pip-wheel-cgeat6bc/choppy-pipe_0f727b6fcec44adf83386773a4f62a72 has version 0.3.9.dev1, which satisfies requirement choppy-pipe==0.3.9.dev1 from https://files.pythonhosted.org/packages/34/10/967cacdebf5208faaac1c199de3a7325ebbaf694700d9896d7ed82a0d44c/choppy-pipe-0.3.9.dev1.tar.gz
2022-11-15T04:10:31,157   Removed choppy-pipe==0.3.9.dev1 from https://files.pythonhosted.org/packages/34/10/967cacdebf5208faaac1c199de3a7325ebbaf694700d9896d7ed82a0d44c/choppy-pipe-0.3.9.dev1.tar.gz from build tracker '/tmp/pip-build-tracker-ct1mq8dr'
2022-11-15T04:10:31,172 Created temporary directory: /tmp/pip-unpack-z1vfytov
2022-11-15T04:10:31,174 Building wheels for collected packages: choppy-pipe
2022-11-15T04:10:31,184   Created temporary directory: /tmp/pip-wheel-_yymqifb
2022-11-15T04:10:31,185   Building wheel for choppy-pipe (setup.py): started
2022-11-15T04:10:31,187   Destination directory: /tmp/pip-wheel-_yymqifb
2022-11-15T04:10:31,188   Running command python setup.py bdist_wheel
2022-11-15T04:10:33,856   running bdist_wheel
2022-11-15T04:10:34,642   running build
2022-11-15T04:10:34,643   running build_py
2022-11-15T04:10:34,712   creating build
2022-11-15T04:10:34,713   creating build/lib
2022-11-15T04:10:34,714   creating build/lib/choppy
2022-11-15T04:10:34,716   copying choppy/__init__.py -> build/lib/choppy
2022-11-15T04:10:34,719   copying choppy/choppy_pipe.py -> build/lib/choppy
2022-11-15T04:10:34,726   copying choppy/utils.py -> build/lib/choppy
2022-11-15T04:10:34,730   copying choppy/check_utils.py -> build/lib/choppy
2022-11-15T04:10:34,734   copying choppy/exit_code.py -> build/lib/choppy
2022-11-15T04:10:34,737   copying choppy/version.py -> build/lib/choppy
2022-11-15T04:10:34,740   copying choppy/exceptions.py -> build/lib/choppy
2022-11-15T04:10:34,744   creating build/lib/choppy/notification
2022-11-15T04:10:34,746   copying choppy/notification/__init__.py -> build/lib/choppy/notification
2022-11-15T04:10:34,749   copying choppy/notification/messenger.py -> build/lib/choppy/notification
2022-11-15T04:10:34,753   copying choppy/notification/email_notification.py -> build/lib/choppy/notification
2022-11-15T04:10:34,758   creating build/lib/choppy/resources
2022-11-15T04:10:34,760   copying choppy/resources/__init__.py -> build/lib/choppy/resources
2022-11-15T04:10:34,765   creating build/lib/choppy/core
2022-11-15T04:10:34,766   copying choppy/core/__init__.py -> build/lib/choppy/core
2022-11-15T04:10:34,770   copying choppy/core/oss.py -> build/lib/choppy/core
2022-11-15T04:10:34,773   copying choppy/core/validator.py -> build/lib/choppy/core
2022-11-15T04:10:34,777   copying choppy/core/cromwell.py -> build/lib/choppy/core
2022-11-15T04:10:34,781   copying choppy/core/choppy_store.py -> build/lib/choppy/core
2022-11-15T04:10:34,785   copying choppy/core/project_revision.py -> build/lib/choppy/core
2022-11-15T04:10:34,789   copying choppy/core/scaffold.py -> build/lib/choppy/core
2022-11-15T04:10:34,793   copying choppy/core/models.py -> build/lib/choppy/core
2022-11-15T04:10:34,796   copying choppy/core/app_utils.py -> build/lib/choppy/core
2022-11-15T04:10:34,800   copying choppy/core/json_checker.py -> build/lib/choppy/core
2022-11-15T04:10:34,804   copying choppy/core/workflow.py -> build/lib/choppy/core
2022-11-15T04:10:34,807   copying choppy/core/monitor.py -> build/lib/choppy/core
2022-11-15T04:10:34,813   creating build/lib/choppy/config
2022-11-15T04:10:34,814   copying choppy/config/__init__.py -> build/lib/choppy/config
2022-11-15T04:10:34,818   copying choppy/config/config.py -> build/lib/choppy/config
2022-11-15T04:10:34,822   copying choppy/config/schema.py -> build/lib/choppy/config
2022-11-15T04:10:34,824   running egg_info
2022-11-15T04:10:34,969   writing choppy_pipe.egg-info/PKG-INFO
2022-11-15T04:10:34,974   writing dependency_links to choppy_pipe.egg-info/dependency_links.txt
2022-11-15T04:10:34,978   writing entry points to choppy_pipe.egg-info/entry_points.txt
2022-11-15T04:10:34,980   writing requirements to choppy_pipe.egg-info/requires.txt
2022-11-15T04:10:34,982   writing top-level names to choppy_pipe.egg-info/top_level.txt
2022-11-15T04:10:35,053   reading manifest file 'choppy_pipe.egg-info/SOURCES.txt'
2022-11-15T04:10:35,069   reading manifest template 'MANIFEST.in'
2022-11-15T04:10:35,071   warning: no files found matching 'config.py'
2022-11-15T04:10:35,151   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2022-11-15T04:10:35,153   no previously-included directories found matching 'docs/_build'
2022-11-15T04:10:35,154   adding license file 'LICENSE'
2022-11-15T04:10:35,154   adding license file 'LICENSE.md'
2022-11-15T04:10:35,155   adding license file 'AUTHORS'
2022-11-15T04:10:35,173   writing manifest file 'choppy_pipe.egg-info/SOURCES.txt'
2022-11-15T04:10:35,178   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/config.schemas' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,178       !!


2022-11-15T04:10:35,179       ############################
2022-11-15T04:10:35,179       # Package would be ignored #
2022-11-15T04:10:35,180       ############################
2022-11-15T04:10:35,180       Python recognizes 'choppy/config.schemas' as an importable package,
2022-11-15T04:10:35,180       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,181       'choppy/config.schemas' has been automatically added to the distribution only
2022-11-15T04:10:35,181       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,181       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,182       Please make sure that 'choppy/config.schemas' is included as a package by using
2022-11-15T04:10:35,182       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,183       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,183       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,184       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,184       documentation page.


2022-11-15T04:10:35,185   !!

2022-11-15T04:10:35,185     check.warn(importable)
2022-11-15T04:10:35,186   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.lib' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,186       !!


2022-11-15T04:10:35,187       ############################
2022-11-15T04:10:35,187       # Package would be ignored #
2022-11-15T04:10:35,188       ############################
2022-11-15T04:10:35,188       Python recognizes 'choppy/resources.lib' as an importable package,
2022-11-15T04:10:35,188       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,189       'choppy/resources.lib' has been automatically added to the distribution only
2022-11-15T04:10:35,189       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,190       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,190       Please make sure that 'choppy/resources.lib' is included as a package by using
2022-11-15T04:10:35,190       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,191       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,191       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,192       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,192       documentation page.


2022-11-15T04:10:35,193   !!

2022-11-15T04:10:35,193     check.warn(importable)
2022-11-15T04:10:35,194   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.scaffold_template' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,194       !!


2022-11-15T04:10:35,195       ############################
2022-11-15T04:10:35,195       # Package would be ignored #
2022-11-15T04:10:35,195       ############################
2022-11-15T04:10:35,196       Python recognizes 'choppy/resources.scaffold_template' as an importable package,
2022-11-15T04:10:35,196       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,197       'choppy/resources.scaffold_template' has been automatically added to the distribution only
2022-11-15T04:10:35,197       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,197       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,198       Please make sure that 'choppy/resources.scaffold_template' is included as a package by using
2022-11-15T04:10:35,198       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,198       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,199       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,199       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,199       documentation page.


2022-11-15T04:10:35,200   !!

2022-11-15T04:10:35,201     check.warn(importable)
2022-11-15T04:10:35,201   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.scaffold_template.docker' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,201       !!


2022-11-15T04:10:35,203       ############################
2022-11-15T04:10:35,203       # Package would be ignored #
2022-11-15T04:10:35,204       ############################
2022-11-15T04:10:35,204       Python recognizes 'choppy/resources.scaffold_template.docker' as an importable package,
2022-11-15T04:10:35,205       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,206       'choppy/resources.scaffold_template.docker' has been automatically added to the distribution only
2022-11-15T04:10:35,206       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,206       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,208       Please make sure that 'choppy/resources.scaffold_template.docker' is included as a package by using
2022-11-15T04:10:35,208       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,208       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,209       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,210       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,210       documentation page.


2022-11-15T04:10:35,211   !!

2022-11-15T04:10:35,212     check.warn(importable)
2022-11-15T04:10:35,213   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.scaffold_template.docker.my_program_1' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,213       !!


2022-11-15T04:10:35,215       ############################
2022-11-15T04:10:35,215       # Package would be ignored #
2022-11-15T04:10:35,216       ############################
2022-11-15T04:10:35,216       Python recognizes 'choppy/resources.scaffold_template.docker.my_program_1' as an importable package,
2022-11-15T04:10:35,217       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,217       'choppy/resources.scaffold_template.docker.my_program_1' has been automatically added to the distribution only
2022-11-15T04:10:35,218       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,218       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,219       Please make sure that 'choppy/resources.scaffold_template.docker.my_program_1' is included as a package by using
2022-11-15T04:10:35,220       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,220       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,220       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,221       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,222       documentation page.


2022-11-15T04:10:35,223   !!

2022-11-15T04:10:35,224     check.warn(importable)
2022-11-15T04:10:35,224   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.scaffold_template.docker.my_program_2' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,225       !!


2022-11-15T04:10:35,226       ############################
2022-11-15T04:10:35,227       # Package would be ignored #
2022-11-15T04:10:35,227       ############################
2022-11-15T04:10:35,228       Python recognizes 'choppy/resources.scaffold_template.docker.my_program_2' as an importable package,
2022-11-15T04:10:35,228       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,229       'choppy/resources.scaffold_template.docker.my_program_2' has been automatically added to the distribution only
2022-11-15T04:10:35,229       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,230       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,231       Please make sure that 'choppy/resources.scaffold_template.docker.my_program_2' is included as a package by using
2022-11-15T04:10:35,231       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,232       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,232       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,233       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,233       documentation page.


2022-11-15T04:10:35,235   !!

2022-11-15T04:10:35,236     check.warn(importable)
2022-11-15T04:10:35,236   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.scaffold_template.report' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,237       !!


2022-11-15T04:10:35,237       ############################
2022-11-15T04:10:35,238       # Package would be ignored #
2022-11-15T04:10:35,238       ############################
2022-11-15T04:10:35,238       Python recognizes 'choppy/resources.scaffold_template.report' as an importable package,
2022-11-15T04:10:35,239       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,239       'choppy/resources.scaffold_template.report' has been automatically added to the distribution only
2022-11-15T04:10:35,240       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,240       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,240       Please make sure that 'choppy/resources.scaffold_template.report' is included as a package by using
2022-11-15T04:10:35,241       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,241       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,241       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,242       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,242       documentation page.


2022-11-15T04:10:35,243   !!

2022-11-15T04:10:35,244     check.warn(importable)
2022-11-15T04:10:35,244   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.scaffold_template.report.about' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,244       !!


2022-11-15T04:10:35,245       ############################
2022-11-15T04:10:35,246       # Package would be ignored #
2022-11-15T04:10:35,246       ############################
2022-11-15T04:10:35,246       Python recognizes 'choppy/resources.scaffold_template.report.about' as an importable package,
2022-11-15T04:10:35,247       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,247       'choppy/resources.scaffold_template.report.about' has been automatically added to the distribution only
2022-11-15T04:10:35,247       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,248       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,248       Please make sure that 'choppy/resources.scaffold_template.report.about' is included as a package by using
2022-11-15T04:10:35,249       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,249       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,249       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,250       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,250       documentation page.


2022-11-15T04:10:35,251   !!

2022-11-15T04:10:35,252     check.warn(importable)
2022-11-15T04:10:35,252   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.scaffold_template.report.project' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,252       !!


2022-11-15T04:10:35,253       ############################
2022-11-15T04:10:35,253       # Package would be ignored #
2022-11-15T04:10:35,254       ############################
2022-11-15T04:10:35,254       Python recognizes 'choppy/resources.scaffold_template.report.project' as an importable package,
2022-11-15T04:10:35,254       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,255       'choppy/resources.scaffold_template.report.project' has been automatically added to the distribution only
2022-11-15T04:10:35,255       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,255       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,256       Please make sure that 'choppy/resources.scaffold_template.report.project' is included as a package by using
2022-11-15T04:10:35,256       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,257       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,257       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,257       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,258       documentation page.


2022-11-15T04:10:35,259   !!

2022-11-15T04:10:35,259     check.warn(importable)
2022-11-15T04:10:35,259   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.scaffold_template.tasks' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,260       !!


2022-11-15T04:10:35,261       ############################
2022-11-15T04:10:35,261       # Package would be ignored #
2022-11-15T04:10:35,261       ############################
2022-11-15T04:10:35,261       Python recognizes 'choppy/resources.scaffold_template.tasks' as an importable package,
2022-11-15T04:10:35,262       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,262       'choppy/resources.scaffold_template.tasks' has been automatically added to the distribution only
2022-11-15T04:10:35,263       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,263       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,264       Please make sure that 'choppy/resources.scaffold_template.tasks' is included as a package by using
2022-11-15T04:10:35,264       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,264       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,264       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,265       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,265       documentation page.


2022-11-15T04:10:35,266   !!

2022-11-15T04:10:35,267     check.warn(importable)
2022-11-15T04:10:35,267   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'choppy/resources.scaffold_template.test' as data is deprecated, please list it in `packages`.
2022-11-15T04:10:35,267       !!


2022-11-15T04:10:35,268       ############################
2022-11-15T04:10:35,268       # Package would be ignored #
2022-11-15T04:10:35,269       ############################
2022-11-15T04:10:35,269       Python recognizes 'choppy/resources.scaffold_template.test' as an importable package,
2022-11-15T04:10:35,269       but it is not listed in the `packages` configuration of setuptools.

2022-11-15T04:10:35,270       'choppy/resources.scaffold_template.test' has been automatically added to the distribution only
2022-11-15T04:10:35,270       because it may contain data files, but this behavior is likely to change
2022-11-15T04:10:35,271       in future versions of setuptools (and therefore is considered deprecated).

2022-11-15T04:10:35,271       Please make sure that 'choppy/resources.scaffold_template.test' is included as a package by using
2022-11-15T04:10:35,271       the `packages` configuration field or the proper discovery methods
2022-11-15T04:10:35,272       (for example by using `find_namespace_packages(...)`/`find_namespace:`
2022-11-15T04:10:35,272       instead of `find_packages(...)`/`find:`).

2022-11-15T04:10:35,273       You can read more about "package discovery" and "data files" on setuptools
2022-11-15T04:10:35,273       documentation page.


2022-11-15T04:10:35,274   !!

2022-11-15T04:10:35,275     check.warn(importable)
2022-11-15T04:10:35,275   copying choppy/resources/cromwell-configfile.template -> build/lib/choppy/resources
2022-11-15T04:10:35,275   copying choppy/resources/cromwell-systemd.template -> build/lib/choppy/resources
2022-11-15T04:10:35,275   copying choppy/resources/dockerfile-shiny.template -> build/lib/choppy/resources
2022-11-15T04:10:35,276   copying choppy/resources/dockerfile.template -> build/lib/choppy/resources
2022-11-15T04:10:35,276   copying choppy/resources/email.template -> build/lib/choppy/resources
2022-11-15T04:10:35,276   copying choppy/resources/mkdocs.yml.template -> build/lib/choppy/resources
2022-11-15T04:10:35,277   copying choppy/resources/multi_wrapper.template -> build/lib/choppy/resources
2022-11-15T04:10:35,277   copying choppy/resources/wrapper.template -> build/lib/choppy/resources
2022-11-15T04:10:35,277   creating build/lib/choppy/resources/lib
2022-11-15T04:10:35,277   copying choppy/resources/lib/ossutil64 -> build/lib/choppy/resources/lib
2022-11-15T04:10:35,705   copying choppy/resources/lib/ossutilmac64 -> build/lib/choppy/resources/lib
2022-11-15T04:10:36,075   creating build/lib/choppy/resources/scaffold_template
2022-11-15T04:10:36,076   copying choppy/resources/scaffold_template/README.md -> build/lib/choppy/resources/scaffold_template
2022-11-15T04:10:36,081   copying choppy/resources/scaffold_template/defaults -> build/lib/choppy/resources/scaffold_template
2022-11-15T04:10:36,085   copying choppy/resources/scaffold_template/inputs -> build/lib/choppy/resources/scaffold_template
2022-11-15T04:10:36,088   copying choppy/resources/scaffold_template/workflow.wdl -> build/lib/choppy/resources/scaffold_template
2022-11-15T04:10:36,091   creating build/lib/choppy/resources/scaffold_template/docker
2022-11-15T04:10:36,092   copying choppy/resources/scaffold_template/docker/README.md -> build/lib/choppy/resources/scaffold_template/docker
2022-11-15T04:10:36,096   creating build/lib/choppy/resources/scaffold_template/docker/my_program_1
2022-11-15T04:10:36,098   copying choppy/resources/scaffold_template/docker/my_program_1/Dockerfile -> build/lib/choppy/resources/scaffold_template/docker/my_program_1
2022-11-15T04:10:36,101   copying choppy/resources/scaffold_template/docker/my_program_1/README.md -> build/lib/choppy/resources/scaffold_template/docker/my_program_1
2022-11-15T04:10:36,104   creating build/lib/choppy/resources/scaffold_template/docker/my_program_2
2022-11-15T04:10:36,106   copying choppy/resources/scaffold_template/docker/my_program_2/Dockerfile -> build/lib/choppy/resources/scaffold_template/docker/my_program_2
2022-11-15T04:10:36,109   copying choppy/resources/scaffold_template/docker/my_program_2/README.md -> build/lib/choppy/resources/scaffold_template/docker/my_program_2
2022-11-15T04:10:36,112   creating build/lib/choppy/resources/scaffold_template/report
2022-11-15T04:10:36,114   copying choppy/resources/scaffold_template/report/defaults -> build/lib/choppy/resources/scaffold_template/report
2022-11-15T04:10:36,118   copying choppy/resources/scaffold_template/report/index.md -> build/lib/choppy/resources/scaffold_template/report
2022-11-15T04:10:36,121   creating build/lib/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:36,122   copying choppy/resources/scaffold_template/report/about/app.md -> build/lib/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:36,125   copying choppy/resources/scaffold_template/report/about/app_store.md -> build/lib/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:36,129   copying choppy/resources/scaffold_template/report/about/choppy.md -> build/lib/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:36,133   copying choppy/resources/scaffold_template/report/about/license.md -> build/lib/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:36,137   creating build/lib/choppy/resources/scaffold_template/report/project
2022-11-15T04:10:36,138   copying choppy/resources/scaffold_template/report/project/sample.md -> build/lib/choppy/resources/scaffold_template/report/project
2022-11-15T04:10:36,142   creating build/lib/choppy/resources/scaffold_template/tasks
2022-11-15T04:10:36,143   copying choppy/resources/scaffold_template/tasks/task_example.wdl -> build/lib/choppy/resources/scaffold_template/tasks
2022-11-15T04:10:36,146   creating build/lib/choppy/resources/scaffold_template/test
2022-11-15T04:10:36,148   copying choppy/resources/scaffold_template/test/README.md -> build/lib/choppy/resources/scaffold_template/test
2022-11-15T04:10:36,151   copying choppy/resources/scaffold_template/test/samples -> build/lib/choppy/resources/scaffold_template/test
2022-11-15T04:10:36,154   creating build/lib/choppy/resources/shiny-plugin
2022-11-15T04:10:36,156   copying choppy/resources/shiny-plugin/README.md -> build/lib/choppy/resources/shiny-plugin
2022-11-15T04:10:36,160   copying choppy/resources/shiny-plugin/packrat.R -> build/lib/choppy/resources/shiny-plugin
2022-11-15T04:10:36,164   copying choppy/resources/shiny-plugin/shiny-server.sh -> build/lib/choppy/resources/shiny-plugin
2022-11-15T04:10:36,168   copying choppy/config/choppy-server.conf.example -> build/lib/choppy/config
2022-11-15T04:10:36,172   copying choppy/config/choppy.conf.example -> build/lib/choppy/config
2022-11-15T04:10:36,175   creating build/lib/choppy/config/schemas
2022-11-15T04:10:36,177   copying choppy/config/schemas/config_email.json -> build/lib/choppy/config/schemas
2022-11-15T04:10:36,181   copying choppy/config/schemas/config_general.json -> build/lib/choppy/config/schemas
2022-11-15T04:10:36,184   copying choppy/config/schemas/config_local.json -> build/lib/choppy/config/schemas
2022-11-15T04:10:36,188   copying choppy/config/schemas/config_oss.json -> build/lib/choppy/config/schemas
2022-11-15T04:10:36,191   copying choppy/config/schemas/config_remote.json -> build/lib/choppy/config/schemas
2022-11-15T04:10:36,195   copying choppy/config/schemas/config_repo.json -> build/lib/choppy/config/schemas
2022-11-15T04:10:36,199   copying choppy/config/schemas/config_server.json -> build/lib/choppy/config/schemas
2022-11-15T04:10:36,202   copying choppy/config/schemas/samples.py -> build/lib/choppy/config/schemas
2022-11-15T04:10:36,214   /usr/local/lib/python3.7/dist-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-11-15T04:10:36,214     setuptools.SetuptoolsDeprecationWarning,
2022-11-15T04:10:36,277   installing to build/bdist.linux-armv7l/wheel
2022-11-15T04:10:36,278   running install
2022-11-15T04:10:36,340   running install_lib
2022-11-15T04:10:36,406   creating build/bdist.linux-armv7l
2022-11-15T04:10:36,407   creating build/bdist.linux-armv7l/wheel
2022-11-15T04:10:36,410   creating build/bdist.linux-armv7l/wheel/choppy
2022-11-15T04:10:36,411   copying build/lib/choppy/__init__.py -> build/bdist.linux-armv7l/wheel/choppy
2022-11-15T04:10:36,417   creating build/bdist.linux-armv7l/wheel/choppy/notification
2022-11-15T04:10:36,418   copying build/lib/choppy/notification/__init__.py -> build/bdist.linux-armv7l/wheel/choppy/notification
2022-11-15T04:10:36,422   copying build/lib/choppy/notification/messenger.py -> build/bdist.linux-armv7l/wheel/choppy/notification
2022-11-15T04:10:36,425   copying build/lib/choppy/notification/email_notification.py -> build/bdist.linux-armv7l/wheel/choppy/notification
2022-11-15T04:10:36,429   copying build/lib/choppy/choppy_pipe.py -> build/bdist.linux-armv7l/wheel/choppy
2022-11-15T04:10:36,437   creating build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:36,439   copying build/lib/choppy/resources/cromwell-systemd.template -> build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:36,443   creating build/bdist.linux-armv7l/wheel/choppy/resources/lib
2022-11-15T04:10:36,445   copying build/lib/choppy/resources/lib/ossutil64 -> build/bdist.linux-armv7l/wheel/choppy/resources/lib
2022-11-15T04:10:36,770   copying build/lib/choppy/resources/lib/ossutilmac64 -> build/bdist.linux-armv7l/wheel/choppy/resources/lib
2022-11-15T04:10:37,223   copying build/lib/choppy/resources/__init__.py -> build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:37,226   copying build/lib/choppy/resources/mkdocs.yml.template -> build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:37,230   creating build/bdist.linux-armv7l/wheel/choppy/resources/shiny-plugin
2022-11-15T04:10:37,232   copying build/lib/choppy/resources/shiny-plugin/README.md -> build/bdist.linux-armv7l/wheel/choppy/resources/shiny-plugin
2022-11-15T04:10:37,236   copying build/lib/choppy/resources/shiny-plugin/packrat.R -> build/bdist.linux-armv7l/wheel/choppy/resources/shiny-plugin
2022-11-15T04:10:37,239   copying build/lib/choppy/resources/shiny-plugin/shiny-server.sh -> build/bdist.linux-armv7l/wheel/choppy/resources/shiny-plugin
2022-11-15T04:10:37,243   copying build/lib/choppy/resources/dockerfile-shiny.template -> build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:37,248   creating build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template
2022-11-15T04:10:37,250   creating build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report
2022-11-15T04:10:37,253   creating build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:37,254   copying build/lib/choppy/resources/scaffold_template/report/about/choppy.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:37,259   copying build/lib/choppy/resources/scaffold_template/report/about/license.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:37,262   copying build/lib/choppy/resources/scaffold_template/report/about/app_store.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:37,265   copying build/lib/choppy/resources/scaffold_template/report/about/app.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report/about
2022-11-15T04:10:37,268   creating build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report/project
2022-11-15T04:10:37,270   copying build/lib/choppy/resources/scaffold_template/report/project/sample.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report/project
2022-11-15T04:10:37,272   copying build/lib/choppy/resources/scaffold_template/report/index.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report
2022-11-15T04:10:37,275   copying build/lib/choppy/resources/scaffold_template/report/defaults -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/report
2022-11-15T04:10:37,278   copying build/lib/choppy/resources/scaffold_template/README.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template
2022-11-15T04:10:37,282   copying build/lib/choppy/resources/scaffold_template/inputs -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template
2022-11-15T04:10:37,285   copying build/lib/choppy/resources/scaffold_template/workflow.wdl -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template
2022-11-15T04:10:37,287   copying build/lib/choppy/resources/scaffold_template/defaults -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template
2022-11-15T04:10:37,291   creating build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/test
2022-11-15T04:10:37,293   copying build/lib/choppy/resources/scaffold_template/test/README.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/test
2022-11-15T04:10:37,296   copying build/lib/choppy/resources/scaffold_template/test/samples -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/test
2022-11-15T04:10:37,299   creating build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/tasks
2022-11-15T04:10:37,300   copying build/lib/choppy/resources/scaffold_template/tasks/task_example.wdl -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/tasks
2022-11-15T04:10:37,306   creating build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/docker
2022-11-15T04:10:37,308   copying build/lib/choppy/resources/scaffold_template/docker/README.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/docker
2022-11-15T04:10:37,313   creating build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/docker/my_program_1
2022-11-15T04:10:37,315   copying build/lib/choppy/resources/scaffold_template/docker/my_program_1/README.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/docker/my_program_1
2022-11-15T04:10:37,319   copying build/lib/choppy/resources/scaffold_template/docker/my_program_1/Dockerfile -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/docker/my_program_1
2022-11-15T04:10:37,323   creating build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/docker/my_program_2
2022-11-15T04:10:37,325   copying build/lib/choppy/resources/scaffold_template/docker/my_program_2/README.md -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/docker/my_program_2
2022-11-15T04:10:37,327   copying build/lib/choppy/resources/scaffold_template/docker/my_program_2/Dockerfile -> build/bdist.linux-armv7l/wheel/choppy/resources/scaffold_template/docker/my_program_2
2022-11-15T04:10:37,330   copying build/lib/choppy/resources/multi_wrapper.template -> build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:37,333   copying build/lib/choppy/resources/wrapper.template -> build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:37,336   copying build/lib/choppy/resources/email.template -> build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:37,339   copying build/lib/choppy/resources/dockerfile.template -> build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:37,342   copying build/lib/choppy/resources/cromwell-configfile.template -> build/bdist.linux-armv7l/wheel/choppy/resources
2022-11-15T04:10:37,345   copying build/lib/choppy/utils.py -> build/bdist.linux-armv7l/wheel/choppy
2022-11-15T04:10:37,349   copying build/lib/choppy/check_utils.py -> build/bdist.linux-armv7l/wheel/choppy
2022-11-15T04:10:37,353   copying build/lib/choppy/exit_code.py -> build/bdist.linux-armv7l/wheel/choppy
2022-11-15T04:10:37,357   creating build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,359   copying build/lib/choppy/core/__init__.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,362   copying build/lib/choppy/core/oss.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,366   copying build/lib/choppy/core/validator.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,370   copying build/lib/choppy/core/cromwell.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,374   copying build/lib/choppy/core/choppy_store.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,378   copying build/lib/choppy/core/project_revision.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,381   copying build/lib/choppy/core/scaffold.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,385   copying build/lib/choppy/core/models.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,388   copying build/lib/choppy/core/app_utils.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,393   copying build/lib/choppy/core/json_checker.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,396   copying build/lib/choppy/core/workflow.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,399   copying build/lib/choppy/core/monitor.py -> build/bdist.linux-armv7l/wheel/choppy/core
2022-11-15T04:10:37,404   copying build/lib/choppy/version.py -> build/bdist.linux-armv7l/wheel/choppy
2022-11-15T04:10:37,407   copying build/lib/choppy/exceptions.py -> build/bdist.linux-armv7l/wheel/choppy
2022-11-15T04:10:37,411   creating build/bdist.linux-armv7l/wheel/choppy/config
2022-11-15T04:10:37,412   copying build/lib/choppy/config/__init__.py -> build/bdist.linux-armv7l/wheel/choppy/config
2022-11-15T04:10:37,415   copying build/lib/choppy/config/config.py -> build/bdist.linux-armv7l/wheel/choppy/config
2022-11-15T04:10:37,419   copying build/lib/choppy/config/choppy.conf.example -> build/bdist.linux-armv7l/wheel/choppy/config
2022-11-15T04:10:37,424   creating build/bdist.linux-armv7l/wheel/choppy/config/schemas
2022-11-15T04:10:37,425   copying build/lib/choppy/config/schemas/config_repo.json -> build/bdist.linux-armv7l/wheel/choppy/config/schemas
2022-11-15T04:10:37,429   copying build/lib/choppy/config/schemas/config_general.json -> build/bdist.linux-armv7l/wheel/choppy/config/schemas
2022-11-15T04:10:37,432   copying build/lib/choppy/config/schemas/config_oss.json -> build/bdist.linux-armv7l/wheel/choppy/config/schemas
2022-11-15T04:10:37,435   copying build/lib/choppy/config/schemas/config_remote.json -> build/bdist.linux-armv7l/wheel/choppy/config/schemas
2022-11-15T04:10:37,438   copying build/lib/choppy/config/schemas/samples.py -> build/bdist.linux-armv7l/wheel/choppy/config/schemas
2022-11-15T04:10:37,441   copying build/lib/choppy/config/schemas/config_email.json -> build/bdist.linux-armv7l/wheel/choppy/config/schemas
2022-11-15T04:10:37,444   copying build/lib/choppy/config/schemas/config_server.json -> build/bdist.linux-armv7l/wheel/choppy/config/schemas
2022-11-15T04:10:37,447   copying build/lib/choppy/config/schemas/config_local.json -> build/bdist.linux-armv7l/wheel/choppy/config/schemas
2022-11-15T04:10:37,450   copying build/lib/choppy/config/schema.py -> build/bdist.linux-armv7l/wheel/choppy/config
2022-11-15T04:10:37,454   copying build/lib/choppy/config/choppy-server.conf.example -> build/bdist.linux-armv7l/wheel/choppy/config
2022-11-15T04:10:37,456   running install_egg_info
2022-11-15T04:10:37,529   Copying choppy_pipe.egg-info to build/bdist.linux-armv7l/wheel/choppy_pipe-0.3.9.dev1-py3.7.egg-info
2022-11-15T04:10:37,557   running install_scripts
2022-11-15T04:10:37,813   adding license file "LICENSE" (matched pattern "LICEN[CS]E*")
2022-11-15T04:10:37,814   adding license file "LICENSE.md" (matched pattern "LICEN[CS]E*")
2022-11-15T04:10:37,816   adding license file "AUTHORS" (matched pattern "AUTHORS*")
2022-11-15T04:10:37,832   creating build/bdist.linux-armv7l/wheel/choppy_pipe-0.3.9.dev1.dist-info/WHEEL
2022-11-15T04:10:37,837   creating '/tmp/pip-wheel-_yymqifb/choppy_pipe-0.3.9.dev1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2022-11-15T04:10:37,842   adding 'choppy/__init__.py'
2022-11-15T04:10:37,845   adding 'choppy/check_utils.py'
2022-11-15T04:10:37,860   adding 'choppy/choppy_pipe.py'
2022-11-15T04:10:37,864   adding 'choppy/exceptions.py'
2022-11-15T04:10:37,866   adding 'choppy/exit_code.py'
2022-11-15T04:10:37,869   adding 'choppy/utils.py'
2022-11-15T04:10:37,872   adding 'choppy/version.py'
2022-11-15T04:10:37,875   adding 'choppy/config/__init__.py'
2022-11-15T04:10:37,877   adding 'choppy/config/choppy-server.conf.example'
2022-11-15T04:10:37,879   adding 'choppy/config/choppy.conf.example'
2022-11-15T04:10:37,884   adding 'choppy/config/config.py'
2022-11-15T04:10:37,886   adding 'choppy/config/schema.py'
2022-11-15T04:10:37,890   adding 'choppy/config/schemas/config_email.json'
2022-11-15T04:10:37,892   adding 'choppy/config/schemas/config_general.json'
2022-11-15T04:10:37,894   adding 'choppy/config/schemas/config_local.json'
2022-11-15T04:10:37,896   adding 'choppy/config/schemas/config_oss.json'
2022-11-15T04:10:37,898   adding 'choppy/config/schemas/config_remote.json'
2022-11-15T04:10:37,900   adding 'choppy/config/schemas/config_repo.json'
2022-11-15T04:10:37,903   adding 'choppy/config/schemas/config_server.json'
2022-11-15T04:10:37,905   adding 'choppy/config/schemas/samples.py'
2022-11-15T04:10:37,908   adding 'choppy/core/__init__.py'
2022-11-15T04:10:37,914   adding 'choppy/core/app_utils.py'
2022-11-15T04:10:37,918   adding 'choppy/core/choppy_store.py'
2022-11-15T04:10:37,923   adding 'choppy/core/cromwell.py'
2022-11-15T04:10:37,926   adding 'choppy/core/json_checker.py'
2022-11-15T04:10:37,929   adding 'choppy/core/models.py'
2022-11-15T04:10:37,934   adding 'choppy/core/monitor.py'
2022-11-15T04:10:37,937   adding 'choppy/core/oss.py'
2022-11-15T04:10:37,939   adding 'choppy/core/project_revision.py'
2022-11-15T04:10:37,942   adding 'choppy/core/scaffold.py'
2022-11-15T04:10:37,946   adding 'choppy/core/validator.py'
2022-11-15T04:10:37,949   adding 'choppy/core/workflow.py'
2022-11-15T04:10:37,952   adding 'choppy/notification/__init__.py'
2022-11-15T04:10:37,955   adding 'choppy/notification/email_notification.py'
2022-11-15T04:10:37,957   adding 'choppy/notification/messenger.py'
2022-11-15T04:10:37,961   adding 'choppy/resources/__init__.py'
2022-11-15T04:10:37,963   adding 'choppy/resources/cromwell-configfile.template'
2022-11-15T04:10:37,966   adding 'choppy/resources/cromwell-systemd.template'
2022-11-15T04:10:37,968   adding 'choppy/resources/dockerfile-shiny.template'
2022-11-15T04:10:37,970   adding 'choppy/resources/dockerfile.template'
2022-11-15T04:10:37,973   adding 'choppy/resources/email.template'
2022-11-15T04:10:37,975   adding 'choppy/resources/mkdocs.yml.template'
2022-11-15T04:10:37,978   adding 'choppy/resources/multi_wrapper.template'
2022-11-15T04:10:37,980   adding 'choppy/resources/wrapper.template'
2022-11-15T04:10:41,949   adding 'choppy/resources/lib/ossutil64'
2022-11-15T04:10:46,021   adding 'choppy/resources/lib/ossutilmac64'
2022-11-15T04:10:46,212   adding 'choppy/resources/scaffold_template/README.md'
2022-11-15T04:10:46,215   adding 'choppy/resources/scaffold_template/defaults'
2022-11-15T04:10:46,217   adding 'choppy/resources/scaffold_template/inputs'
2022-11-15T04:10:46,219   adding 'choppy/resources/scaffold_template/workflow.wdl'
2022-11-15T04:10:46,222   adding 'choppy/resources/scaffold_template/docker/README.md'
2022-11-15T04:10:46,225   adding 'choppy/resources/scaffold_template/docker/my_program_1/Dockerfile'
2022-11-15T04:10:46,227   adding 'choppy/resources/scaffold_template/docker/my_program_1/README.md'
2022-11-15T04:10:46,230   adding 'choppy/resources/scaffold_template/docker/my_program_2/Dockerfile'
2022-11-15T04:10:46,232   adding 'choppy/resources/scaffold_template/docker/my_program_2/README.md'
2022-11-15T04:10:46,235   adding 'choppy/resources/scaffold_template/report/defaults'
2022-11-15T04:10:46,237   adding 'choppy/resources/scaffold_template/report/index.md'
2022-11-15T04:10:46,240   adding 'choppy/resources/scaffold_template/report/about/app.md'
2022-11-15T04:10:46,242   adding 'choppy/resources/scaffold_template/report/about/app_store.md'
2022-11-15T04:10:46,247   adding 'choppy/resources/scaffold_template/report/about/choppy.md'
2022-11-15T04:10:46,250   adding 'choppy/resources/scaffold_template/report/about/license.md'
2022-11-15T04:10:46,253   adding 'choppy/resources/scaffold_template/report/project/sample.md'
2022-11-15T04:10:46,256   adding 'choppy/resources/scaffold_template/tasks/task_example.wdl'
2022-11-15T04:10:46,259   adding 'choppy/resources/scaffold_template/test/README.md'
2022-11-15T04:10:46,261   adding 'choppy/resources/scaffold_template/test/samples'
2022-11-15T04:10:46,265   adding 'choppy/resources/shiny-plugin/README.md'
2022-11-15T04:10:46,268   adding 'choppy/resources/shiny-plugin/packrat.R'
2022-11-15T04:10:46,270   adding 'choppy/resources/shiny-plugin/shiny-server.sh'
2022-11-15T04:10:46,275   adding 'choppy_pipe-0.3.9.dev1.dist-info/AUTHORS'
2022-11-15T04:10:46,288   adding 'choppy_pipe-0.3.9.dev1.dist-info/LICENSE'
2022-11-15T04:10:46,302   adding 'choppy_pipe-0.3.9.dev1.dist-info/LICENSE.md'
2022-11-15T04:10:46,309   adding 'choppy_pipe-0.3.9.dev1.dist-info/METADATA'
2022-11-15T04:10:46,311   adding 'choppy_pipe-0.3.9.dev1.dist-info/WHEEL'
2022-11-15T04:10:46,312   adding 'choppy_pipe-0.3.9.dev1.dist-info/entry_points.txt'
2022-11-15T04:10:46,314   adding 'choppy_pipe-0.3.9.dev1.dist-info/top_level.txt'
2022-11-15T04:10:46,318   adding 'choppy_pipe-0.3.9.dev1.dist-info/RECORD'
2022-11-15T04:10:46,591   removing build/bdist.linux-armv7l/wheel
2022-11-15T04:10:46,899   Building wheel for choppy-pipe (setup.py): finished with status 'done'
2022-11-15T04:10:47,136   Created wheel for choppy-pipe: filename=choppy_pipe-0.3.9.dev1-py3-none-any.whl size=7818282 sha256=1a1a92c1c9343b69e6399f2acab2fe3b70d66c1de819da1b89245e8084d9cbd3
2022-11-15T04:10:47,139   Stored in directory: /tmp/pip-ephem-wheel-cache-7s4pjkbh/wheels/1d/e9/6a/79734f5b2f1ab6a59807f951507a7c2d3ace977f9037ba90c7
2022-11-15T04:10:47,251 Successfully built choppy-pipe
2022-11-15T04:10:47,826 Removed build tracker: '/tmp/pip-build-tracker-ct1mq8dr'