2022-11-29T14:10:00,205 Created temporary directory: /tmp/pip-ephem-wheel-cache-qotw31vo 2022-11-29T14:10:00,207 Created temporary directory: /tmp/pip-build-tracker-4fs8eskt 2022-11-29T14:10:00,207 Initialized build tracking at /tmp/pip-build-tracker-4fs8eskt 2022-11-29T14:10:00,207 Created build tracker: /tmp/pip-build-tracker-4fs8eskt 2022-11-29T14:10:00,208 Entered build tracker: /tmp/pip-build-tracker-4fs8eskt 2022-11-29T14:10:00,208 Created temporary directory: /tmp/pip-wheel-_jf22wbu 2022-11-29T14:10:00,211 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453 2022-11-29T14:10:00,214 Created temporary directory: /tmp/pip-ephem-wheel-cache-ry0ykw_8 2022-11-29T14:10:00,237 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2022-11-29T14:10:00,241 2 location(s) to search for versions of medspacy: 2022-11-29T14:10:00,241 * https://pypi.org/simple/medspacy/ 2022-11-29T14:10:00,241 * https://www.piwheels.org/simple/medspacy/ 2022-11-29T14:10:00,241 Fetching project page and analyzing links: https://pypi.org/simple/medspacy/ 2022-11-29T14:10:00,241 Getting page https://pypi.org/simple/medspacy/ 2022-11-29T14:10:00,243 Found index url https://pypi.org/simple 2022-11-29T14:10:00,294 Fetched page https://pypi.org/simple/medspacy/ as application/vnd.pypi.simple.v1+json 2022-11-29T14:10:00,297 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ae/77/fe0ce14adc1b5e620ad5e6f975c12691720c4c21815c9ea75a05b963fa96/medspacy-0.0.1-py3.6.egg (from https://pypi.org/simple/medspacy/) 2022-11-29T14:10:00,297 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/3d/77/57eb2cd6315a08a12a6d7b7440c58b1a5990e359d3c22a76ec5fe5a086e1/medspacy-0.0.1-py3.7.egg (from https://pypi.org/simple/medspacy/) 2022-11-29T14:10:00,297 Found link https://files.pythonhosted.org/packages/ab/f7/10af540d31a6b577fef33354d35f79704a14f90fdb54725d3ef6086aa457/medspacy-0.0.1.tar.gz (from https://pypi.org/simple/medspacy/), version: 0.0.1 2022-11-29T14:10:00,298 Found link https://files.pythonhosted.org/packages/f9/21/a18f1f543dc8e0714cc8350cbfc81ba8cfd65c5c49491947f9821e638664/medspacy-0.0.1.1.tar.gz (from https://pypi.org/simple/medspacy/), version: 0.0.1.1 2022-11-29T14:10:00,298 Found link https://files.pythonhosted.org/packages/20/b2/2fac0b741bf5039cd508fbdaf55b879723fd1bd43678bfb3d1491d60f278/medspacy-0.0.1.3.tar.gz (from https://pypi.org/simple/medspacy/), version: 0.0.1.3 2022-11-29T14:10:00,298 Found link https://files.pythonhosted.org/packages/6d/92/2878fea6c830c3e2261248b5d241a55f8ff7d047ce36b7ce1aea3e95a56f/medspacy-0.0.1.4.tar.gz (from https://pypi.org/simple/medspacy/), version: 0.0.1.4 2022-11-29T14:10:00,299 Found link https://files.pythonhosted.org/packages/33/d7/8239fec3c8e11d52c6fa515820c4905f4ec3db5121f0e705e740bcb4f2e9/medspacy-0.1.0.0.tar.gz (from https://pypi.org/simple/medspacy/), version: 0.1.0.0 2022-11-29T14:10:00,299 Found link https://files.pythonhosted.org/packages/fe/30/63b5ac09766140bf215b23b24b735fec507441bd8dbc2191435e1ffa58e4/medspacy-0.1.0.1.tar.gz (from https://pypi.org/simple/medspacy/), version: 0.1.0.1 2022-11-29T14:10:00,299 Found link https://files.pythonhosted.org/packages/07/fe/40e73e62fb7f30e551398b61c83e9d93c6d74e49e4090fb4d94596eae5f5/medspacy-0.1.0.2.tar.gz (from https://pypi.org/simple/medspacy/), version: 0.1.0.2 2022-11-29T14:10:00,300 Found link https://files.pythonhosted.org/packages/ea/b0/29c530b48116b4d311dc585513e342b1a8c7755ff4a7f3486245d47ceb5b/medspacy-0.2.0.0.tar.gz (from https://pypi.org/simple/medspacy/), version: 0.2.0.0 2022-11-29T14:10:00,300 Found link https://files.pythonhosted.org/packages/f7/c9/c8d45af076c67d743e31e3f662b7990cd4df4730e7c6940d7610f7ed53bc/medspacy-0.2.0.1.tar.gz (from https://pypi.org/simple/medspacy/), version: 0.2.0.1 2022-11-29T14:10:00,300 Skipping link: No binaries permitted for medspacy: https://files.pythonhosted.org/packages/ac/23/f379ec8aa33f35428b45df101855d5c4c1b9157113ca7d644c3b1339612f/medspacy-1.0.0-py3-none-any.whl (from https://pypi.org/simple/medspacy/) 2022-11-29T14:10:00,301 Found link https://files.pythonhosted.org/packages/8e/b0/b7ac4a5ef451fdf618afd0554086cf17723f962fc5e810bb3fa539abd81a/medspacy-1.0.0.tar.gz (from https://pypi.org/simple/medspacy/), version: 1.0.0 2022-11-29T14:10:00,301 Skipping link: No binaries permitted for medspacy: https://files.pythonhosted.org/packages/4d/7a/7c87cb81fbb72333110ca4c616f9d2b5239fb2948087e9ad34c3b574c9a0/medspacy-1.0.1-py3-none-any.whl (from https://pypi.org/simple/medspacy/) (requires-python:>=3.8.0) 2022-11-29T14:10:00,301 Found link https://files.pythonhosted.org/packages/49/94/c2ea09038bb46a4ad44e2792450c583c6786ade1b87449ee37fd3b4b509a/medspacy-1.0.1.tar.gz (from https://pypi.org/simple/medspacy/) (requires-python:>=3.8.0), version: 1.0.1 2022-11-29T14:10:00,302 Fetching project page and analyzing links: https://www.piwheels.org/simple/medspacy/ 2022-11-29T14:10:00,302 Getting page https://www.piwheels.org/simple/medspacy/ 2022-11-29T14:10:00,303 Found index url https://www.piwheels.org/simple 2022-11-29T14:10:00,469 Fetched page https://www.piwheels.org/simple/medspacy/ as text/html 2022-11-29T14:10:00,473 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-1.0.0-py3-none-any.whl#sha256=6c165723371eb0f206794cfe8f4f01a996ca57f913767674f90611815fbc3760 (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,473 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-0.2.0.1-py3-none-any.whl#sha256=6e4340c892f7f66a5e802fc6fd42c99e1155dfcf2a99dcd4e7c997e17b230871 (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,473 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-0.2.0.0-py3-none-any.whl#sha256=bd47695dcb2726ac334a6930896dc0d274b154cb1bed95df8e8998af750291c2 (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,473 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-0.1.0.2-py3-none-any.whl#sha256=e9616ca94d4494b66f4b59bf35965465fa58a9c1c09112326c417f1fbad3cbbb (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,474 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-0.1.0.1-py3-none-any.whl#sha256=9e41972461bfcb59a82aa4f28a876c2ceeaadcc5e2bae704137d8faf43b07560 (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,474 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-0.1.0.0-py3-none-any.whl#sha256=2099f6840e4b168b61146214612effbe28d0e7420134ed890a1b85809d3cf93e (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,474 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-0.0.1.4-py3-none-any.whl#sha256=6f8aae04cdc239b8293c4c5cb5c27e82abb51160404029f24e3c6abcab19a500 (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,474 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-0.0.1.3-py3-none-any.whl#sha256=212657803b9a4eb996f8eb729753dde2414438dca683887c095d8bf379220a45 (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,474 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-0.0.1.1-py3-none-any.whl#sha256=fd6c5805fc966277f00a495d117726eb1927227e16dea3d2ccab31b42c18c1b9 (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,474 Skipping link: No binaries permitted for medspacy: https://www.piwheels.org/simple/medspacy/medspacy-0.0.1-py3-none-any.whl#sha256=408832da89b0982add3b2c66b2b0ada91ce90d63993a31b8352d10df804c1aa7 (from https://www.piwheels.org/simple/medspacy/) 2022-11-29T14:10:00,475 Skipping link: not a file: https://www.piwheels.org/simple/medspacy/ 2022-11-29T14:10:00,475 Skipping link: not a file: https://pypi.org/simple/medspacy/ 2022-11-29T14:10:00,494 Given no hashes to check 1 links for project 'medspacy': discarding no candidates 2022-11-29T14:10:00,511 Collecting medspacy==1.0.1 2022-11-29T14:10:00,513 Created temporary directory: /tmp/pip-unpack-whzsfuam 2022-11-29T14:10:00,719 Downloading medspacy-1.0.1.tar.gz (110 kB) 2022-11-29T14:10:01,034 Added medspacy==1.0.1 from https://files.pythonhosted.org/packages/49/94/c2ea09038bb46a4ad44e2792450c583c6786ade1b87449ee37fd3b4b509a/medspacy-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-4fs8eskt' 2022-11-29T14:10:01,036 Running setup.py (path:/tmp/pip-wheel-_jf22wbu/medspacy_7a95aa4550a0451dadf98723c2997bce/setup.py) egg_info for package medspacy 2022-11-29T14:10:01,037 Created temporary directory: /tmp/pip-pip-egg-info-qi3icty3 2022-11-29T14:10:01,037 Preparing metadata (setup.py): started 2022-11-29T14:10:01,038 Running command python setup.py egg_info 2022-11-29T14:10:02,121 Attempting to install quickumls package: medspacy_quickumls==2.7 2022-11-29T14:10:02,121 running egg_info 2022-11-29T14:10:02,123 creating /tmp/pip-pip-egg-info-qi3icty3/medspacy.egg-info 2022-11-29T14:10:02,146 writing /tmp/pip-pip-egg-info-qi3icty3/medspacy.egg-info/PKG-INFO 2022-11-29T14:10:02,148 writing dependency_links to /tmp/pip-pip-egg-info-qi3icty3/medspacy.egg-info/dependency_links.txt 2022-11-29T14:10:02,150 writing requirements to /tmp/pip-pip-egg-info-qi3icty3/medspacy.egg-info/requires.txt 2022-11-29T14:10:02,151 writing top-level names to /tmp/pip-pip-egg-info-qi3icty3/medspacy.egg-info/top_level.txt 2022-11-29T14:10:02,153 writing manifest file '/tmp/pip-pip-egg-info-qi3icty3/medspacy.egg-info/SOURCES.txt' 2022-11-29T14:10:02,242 reading manifest file '/tmp/pip-pip-egg-info-qi3icty3/medspacy.egg-info/SOURCES.txt' 2022-11-29T14:10:02,244 adding license file 'LICENSE' 2022-11-29T14:10:02,250 writing manifest file '/tmp/pip-pip-egg-info-qi3icty3/medspacy.egg-info/SOURCES.txt' 2022-11-29T14:10:02,366 Preparing metadata (setup.py): finished with status 'done' 2022-11-29T14:10:02,372 Source in /tmp/pip-wheel-_jf22wbu/medspacy_7a95aa4550a0451dadf98723c2997bce has version 1.0.1, which satisfies requirement medspacy==1.0.1 from https://files.pythonhosted.org/packages/49/94/c2ea09038bb46a4ad44e2792450c583c6786ade1b87449ee37fd3b4b509a/medspacy-1.0.1.tar.gz 2022-11-29T14:10:02,373 Removed medspacy==1.0.1 from https://files.pythonhosted.org/packages/49/94/c2ea09038bb46a4ad44e2792450c583c6786ade1b87449ee37fd3b4b509a/medspacy-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-4fs8eskt' 2022-11-29T14:10:02,380 Created temporary directory: /tmp/pip-unpack-oo_y_nvg 2022-11-29T14:10:02,381 Building wheels for collected packages: medspacy 2022-11-29T14:10:02,385 Created temporary directory: /tmp/pip-wheel-7m1jpbtq 2022-11-29T14:10:02,385 Building wheel for medspacy (setup.py): started 2022-11-29T14:10:02,386 Destination directory: /tmp/pip-wheel-7m1jpbtq 2022-11-29T14:10:02,386 Running command python setup.py bdist_wheel 2022-11-29T14:10:03,260 Attempting to install quickumls package: medspacy_quickumls==2.7 2022-11-29T14:10:03,475 running bdist_wheel 2022-11-29T14:10:03,764 running build 2022-11-29T14:10:03,764 running build_py 2022-11-29T14:10:03,790 creating build 2022-11-29T14:10:03,790 creating build/lib 2022-11-29T14:10:03,791 creating build/lib/medspacy 2022-11-29T14:10:03,792 copying medspacy/_version.py -> build/lib/medspacy 2022-11-29T14:10:03,793 copying medspacy/custom_tokenizer.py -> build/lib/medspacy 2022-11-29T14:10:03,795 copying medspacy/sentence_splitting.py -> build/lib/medspacy 2022-11-29T14:10:03,797 copying medspacy/__init__.py -> build/lib/medspacy 2022-11-29T14:10:03,798 copying medspacy/visualization.py -> build/lib/medspacy 2022-11-29T14:10:03,801 copying medspacy/_extensions.py -> build/lib/medspacy 2022-11-29T14:10:03,803 copying medspacy/util.py -> build/lib/medspacy 2022-11-29T14:10:03,805 copying medspacy/ner.py -> build/lib/medspacy 2022-11-29T14:10:03,807 copying medspacy/components.py -> build/lib/medspacy 2022-11-29T14:10:03,809 creating build/lib/tests 2022-11-29T14:10:03,810 copying tests/test_medspacy.py -> build/lib/tests 2022-11-29T14:10:03,812 copying tests/__init__.py -> build/lib/tests 2022-11-29T14:10:03,813 copying tests/test_extensions.py -> build/lib/tests 2022-11-29T14:10:03,815 copying tests/test_notebooks.py -> build/lib/tests 2022-11-29T14:10:03,817 creating build/lib/medspacy/postprocess 2022-11-29T14:10:03,818 copying medspacy/postprocess/__init__.py -> build/lib/medspacy/postprocess 2022-11-29T14:10:03,819 copying medspacy/postprocess/postprocessor.py -> build/lib/medspacy/postprocess 2022-11-29T14:10:03,821 copying medspacy/postprocess/postprocessing_rule.py -> build/lib/medspacy/postprocess 2022-11-29T14:10:03,823 copying medspacy/postprocess/postprocessing_pattern.py -> build/lib/medspacy/postprocess 2022-11-29T14:10:03,825 copying medspacy/postprocess/postprocessing_functions.py -> build/lib/medspacy/postprocess 2022-11-29T14:10:03,828 creating build/lib/medspacy/target_matcher 2022-11-29T14:10:03,828 copying medspacy/target_matcher/concept_tagger.py -> build/lib/medspacy/target_matcher 2022-11-29T14:10:03,830 copying medspacy/target_matcher/target_rule.py -> build/lib/medspacy/target_matcher 2022-11-29T14:10:03,832 copying medspacy/target_matcher/target_matcher.py -> build/lib/medspacy/target_matcher 2022-11-29T14:10:03,834 copying medspacy/target_matcher/__init__.py -> build/lib/medspacy/target_matcher 2022-11-29T14:10:03,836 creating build/lib/medspacy/preprocess 2022-11-29T14:10:03,837 copying medspacy/preprocess/__init__.py -> build/lib/medspacy/preprocess 2022-11-29T14:10:03,839 copying medspacy/preprocess/preprocessing_rule.py -> build/lib/medspacy/preprocess 2022-11-29T14:10:03,841 copying medspacy/preprocess/preprocessor.py -> build/lib/medspacy/preprocess 2022-11-29T14:10:03,843 creating build/lib/medspacy/context 2022-11-29T14:10:03,844 copying medspacy/context/context_modifier.py -> build/lib/medspacy/context 2022-11-29T14:10:03,847 copying medspacy/context/context.py -> build/lib/medspacy/context 2022-11-29T14:10:03,849 copying medspacy/context/__init__.py -> build/lib/medspacy/context 2022-11-29T14:10:03,851 copying medspacy/context/context_graph.py -> build/lib/medspacy/context 2022-11-29T14:10:03,853 copying medspacy/context/context_rule.py -> build/lib/medspacy/context 2022-11-29T14:10:03,855 copying medspacy/context/util.py -> build/lib/medspacy/context 2022-11-29T14:10:03,857 creating build/lib/medspacy/common 2022-11-29T14:10:03,858 copying medspacy/common/medspacy_matcher.py -> build/lib/medspacy/common 2022-11-29T14:10:03,861 copying medspacy/common/regex_matcher.py -> build/lib/medspacy/common 2022-11-29T14:10:03,863 copying medspacy/common/__init__.py -> build/lib/medspacy/common 2022-11-29T14:10:03,864 copying medspacy/common/base_rule.py -> build/lib/medspacy/common 2022-11-29T14:10:03,866 copying medspacy/common/util.py -> build/lib/medspacy/common 2022-11-29T14:10:03,869 creating build/lib/medspacy/io 2022-11-29T14:10:03,870 copying medspacy/io/db_reader.py -> build/lib/medspacy/io 2022-11-29T14:10:03,872 copying medspacy/io/config_example.py -> build/lib/medspacy/io 2022-11-29T14:10:03,874 copying medspacy/io/pipeline.py -> build/lib/medspacy/io 2022-11-29T14:10:03,875 copying medspacy/io/db_writer.py -> build/lib/medspacy/io 2022-11-29T14:10:03,878 copying medspacy/io/__init__.py -> build/lib/medspacy/io 2022-11-29T14:10:03,879 copying medspacy/io/doc_consumer.py -> build/lib/medspacy/io 2022-11-29T14:10:03,881 copying medspacy/io/db.py -> build/lib/medspacy/io 2022-11-29T14:10:03,883 copying medspacy/io/db_connect.py -> build/lib/medspacy/io 2022-11-29T14:10:03,885 creating build/lib/medspacy/section_detection 2022-11-29T14:10:03,886 copying medspacy/section_detection/sectionizer.py -> build/lib/medspacy/section_detection 2022-11-29T14:10:03,889 copying medspacy/section_detection/__init__.py -> build/lib/medspacy/section_detection 2022-11-29T14:10:03,891 copying medspacy/section_detection/section_rule.py -> build/lib/medspacy/section_detection 2022-11-29T14:10:03,893 copying medspacy/section_detection/util.py -> build/lib/medspacy/section_detection 2022-11-29T14:10:03,905 copying medspacy/section_detection/section.py -> build/lib/medspacy/section_detection 2022-11-29T14:10:03,917 creating build/lib/resources 2022-11-29T14:10:03,918 copying medspacy/../resources/context_rules.json -> build/lib/medspacy/../resources 2022-11-29T14:10:03,921 copying medspacy/../resources/section_patterns.json -> build/lib/medspacy/../resources 2022-11-29T14:10:03,924 copying medspacy/../resources/rush_rules.tsv -> build/lib/medspacy/../resources 2022-11-29T14:10:03,927 creating build/lib/resources/quickumls 2022-11-29T14:10:03,927 creating build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:03,928 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/normalize-unicode.flag -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:03,930 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/database_backend.flag -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:03,932 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/README.md -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:03,934 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/language.flag -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:03,936 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/lowercase.flag -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:03,938 creating build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,938 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.29.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,941 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.14.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,943 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.39.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,945 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.79.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,947 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.21.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,949 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.40.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,952 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.17.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,954 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.20.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,956 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.33.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,958 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.38.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,960 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.43.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,962 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.35.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,964 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.30.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,966 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,969 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.31.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,971 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.32.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,974 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.8.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,976 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.120.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,978 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.37.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,980 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.27.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,982 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.22.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,984 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.15.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,987 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.28.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,989 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.26.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,991 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.24.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:03,993 creating build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db 2022-11-29T14:10:03,994 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db/cui.unqlite -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db 2022-11-29T14:10:03,997 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db/semtypes.unqlite -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db 2022-11-29T14:10:04,000 creating build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,001 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/normalize-unicode.flag -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,003 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/database_backend.flag -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,005 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/README.md -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,007 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/language.flag -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,009 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/lowercase.flag -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,010 creating build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,011 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.29.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,013 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.14.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,015 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.39.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,017 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.79.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,020 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.21.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,022 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.40.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,024 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.17.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,026 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.20.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,028 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.33.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,030 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.38.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,033 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.43.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,035 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.35.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,037 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.30.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,039 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,041 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.31.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,043 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.32.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,045 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.8.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,047 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.120.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,050 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.37.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,052 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.27.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,054 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.22.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,056 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.15.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,058 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.28.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,060 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.26.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,062 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.24.cdb -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,064 creating build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db 2022-11-29T14:10:04,065 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db/cui.unqlite -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db 2022-11-29T14:10:04,068 copying medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db/semtypes.unqlite -> build/lib/medspacy/../resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db 2022-11-29T14:10:04,104 /usr/local/lib/python3.9/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. 2022-11-29T14:10:04,105 warnings.warn( 2022-11-29T14:10:04,129 installing to build/bdist.linux-armv7l/wheel 2022-11-29T14:10:04,129 running install 2022-11-29T14:10:04,154 running install_lib 2022-11-29T14:10:04,179 creating build/bdist.linux-armv7l 2022-11-29T14:10:04,180 creating build/bdist.linux-armv7l/wheel 2022-11-29T14:10:04,181 creating build/bdist.linux-armv7l/wheel/resources 2022-11-29T14:10:04,182 copying build/lib/resources/context_rules.json -> build/bdist.linux-armv7l/wheel/resources 2022-11-29T14:10:04,186 copying build/lib/resources/section_patterns.json -> build/bdist.linux-armv7l/wheel/resources 2022-11-29T14:10:04,189 creating build/bdist.linux-armv7l/wheel/resources/quickumls 2022-11-29T14:10:04,190 creating build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:04,192 creating build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,193 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.29.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,195 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.14.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,197 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.39.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,198 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.79.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,201 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.21.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,202 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.40.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,205 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.17.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,206 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.20.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,208 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.33.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,210 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.38.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,212 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.43.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,213 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.35.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,215 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.30.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,217 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,220 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.31.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,222 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.32.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,224 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.8.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,226 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.120.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,228 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.37.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,230 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.27.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,232 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.22.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,234 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.15.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,236 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.28.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,238 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.26.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,240 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.24.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db 2022-11-29T14:10:04,242 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/normalize-unicode.flag -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:04,243 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/database_backend.flag -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:04,245 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/README.md -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:04,247 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/language.flag -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:04,249 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/lowercase.flag -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite 2022-11-29T14:10:04,251 creating build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db 2022-11-29T14:10:04,251 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db/cui.unqlite -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db 2022-11-29T14:10:04,254 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db/semtypes.unqlite -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db 2022-11-29T14:10:04,257 creating build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,258 creating build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,260 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.29.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,262 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.14.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,263 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.39.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,265 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.79.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,267 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.21.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,269 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.40.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,271 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.17.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,273 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.20.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,275 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.33.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,277 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.38.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,279 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.43.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,281 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.35.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,283 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.30.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,286 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,288 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.31.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,291 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.32.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,295 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.8.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,296 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.120.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,299 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.37.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,301 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.27.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,303 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.22.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,304 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.15.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,306 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.28.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,308 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.26.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,310 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.24.cdb -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db 2022-11-29T14:10:04,312 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/normalize-unicode.flag -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,314 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/database_backend.flag -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,315 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/README.md -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,317 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/language.flag -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,319 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/lowercase.flag -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite 2022-11-29T14:10:04,321 creating build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db 2022-11-29T14:10:04,321 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db/cui.unqlite -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db 2022-11-29T14:10:04,324 copying build/lib/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db/semtypes.unqlite -> build/bdist.linux-armv7l/wheel/resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db 2022-11-29T14:10:04,327 copying build/lib/resources/rush_rules.tsv -> build/bdist.linux-armv7l/wheel/resources 2022-11-29T14:10:04,330 creating build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,331 copying build/lib/medspacy/_version.py -> build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,333 copying build/lib/medspacy/custom_tokenizer.py -> build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,335 creating build/bdist.linux-armv7l/wheel/medspacy/postprocess 2022-11-29T14:10:04,336 copying build/lib/medspacy/postprocess/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy/postprocess 2022-11-29T14:10:04,338 copying build/lib/medspacy/postprocess/postprocessor.py -> build/bdist.linux-armv7l/wheel/medspacy/postprocess 2022-11-29T14:10:04,340 copying build/lib/medspacy/postprocess/postprocessing_rule.py -> build/bdist.linux-armv7l/wheel/medspacy/postprocess 2022-11-29T14:10:04,341 copying build/lib/medspacy/postprocess/postprocessing_pattern.py -> build/bdist.linux-armv7l/wheel/medspacy/postprocess 2022-11-29T14:10:04,343 copying build/lib/medspacy/postprocess/postprocessing_functions.py -> build/bdist.linux-armv7l/wheel/medspacy/postprocess 2022-11-29T14:10:04,345 copying build/lib/medspacy/sentence_splitting.py -> build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,347 copying build/lib/medspacy/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,349 creating build/bdist.linux-armv7l/wheel/medspacy/target_matcher 2022-11-29T14:10:04,350 copying build/lib/medspacy/target_matcher/concept_tagger.py -> build/bdist.linux-armv7l/wheel/medspacy/target_matcher 2022-11-29T14:10:04,352 copying build/lib/medspacy/target_matcher/target_rule.py -> build/bdist.linux-armv7l/wheel/medspacy/target_matcher 2022-11-29T14:10:04,354 copying build/lib/medspacy/target_matcher/target_matcher.py -> build/bdist.linux-armv7l/wheel/medspacy/target_matcher 2022-11-29T14:10:04,356 copying build/lib/medspacy/target_matcher/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy/target_matcher 2022-11-29T14:10:04,358 creating build/bdist.linux-armv7l/wheel/medspacy/preprocess 2022-11-29T14:10:04,359 copying build/lib/medspacy/preprocess/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy/preprocess 2022-11-29T14:10:04,361 copying build/lib/medspacy/preprocess/preprocessing_rule.py -> build/bdist.linux-armv7l/wheel/medspacy/preprocess 2022-11-29T14:10:04,363 copying build/lib/medspacy/preprocess/preprocessor.py -> build/bdist.linux-armv7l/wheel/medspacy/preprocess 2022-11-29T14:10:04,365 creating build/bdist.linux-armv7l/wheel/medspacy/context 2022-11-29T14:10:04,366 copying build/lib/medspacy/context/context_modifier.py -> build/bdist.linux-armv7l/wheel/medspacy/context 2022-11-29T14:10:04,369 copying build/lib/medspacy/context/context.py -> build/bdist.linux-armv7l/wheel/medspacy/context 2022-11-29T14:10:04,371 copying build/lib/medspacy/context/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy/context 2022-11-29T14:10:04,373 copying build/lib/medspacy/context/context_graph.py -> build/bdist.linux-armv7l/wheel/medspacy/context 2022-11-29T14:10:04,375 copying build/lib/medspacy/context/context_rule.py -> build/bdist.linux-armv7l/wheel/medspacy/context 2022-11-29T14:10:04,377 copying build/lib/medspacy/context/util.py -> build/bdist.linux-armv7l/wheel/medspacy/context 2022-11-29T14:10:04,380 creating build/bdist.linux-armv7l/wheel/medspacy/common 2022-11-29T14:10:04,381 copying build/lib/medspacy/common/medspacy_matcher.py -> build/bdist.linux-armv7l/wheel/medspacy/common 2022-11-29T14:10:04,383 copying build/lib/medspacy/common/regex_matcher.py -> build/bdist.linux-armv7l/wheel/medspacy/common 2022-11-29T14:10:04,386 copying build/lib/medspacy/common/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy/common 2022-11-29T14:10:04,387 copying build/lib/medspacy/common/base_rule.py -> build/bdist.linux-armv7l/wheel/medspacy/common 2022-11-29T14:10:04,390 copying build/lib/medspacy/common/util.py -> build/bdist.linux-armv7l/wheel/medspacy/common 2022-11-29T14:10:04,392 copying build/lib/medspacy/visualization.py -> build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,394 copying build/lib/medspacy/_extensions.py -> build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,398 creating build/bdist.linux-armv7l/wheel/medspacy/io 2022-11-29T14:10:04,399 copying build/lib/medspacy/io/db_reader.py -> build/bdist.linux-armv7l/wheel/medspacy/io 2022-11-29T14:10:04,401 copying build/lib/medspacy/io/config_example.py -> build/bdist.linux-armv7l/wheel/medspacy/io 2022-11-29T14:10:04,403 copying build/lib/medspacy/io/pipeline.py -> build/bdist.linux-armv7l/wheel/medspacy/io 2022-11-29T14:10:04,404 copying build/lib/medspacy/io/db_writer.py -> build/bdist.linux-armv7l/wheel/medspacy/io 2022-11-29T14:10:04,406 copying build/lib/medspacy/io/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy/io 2022-11-29T14:10:04,408 copying build/lib/medspacy/io/doc_consumer.py -> build/bdist.linux-armv7l/wheel/medspacy/io 2022-11-29T14:10:04,410 copying build/lib/medspacy/io/db.py -> build/bdist.linux-armv7l/wheel/medspacy/io 2022-11-29T14:10:04,412 copying build/lib/medspacy/io/db_connect.py -> build/bdist.linux-armv7l/wheel/medspacy/io 2022-11-29T14:10:04,414 copying build/lib/medspacy/util.py -> build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,416 copying build/lib/medspacy/ner.py -> build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,418 creating build/bdist.linux-armv7l/wheel/medspacy/section_detection 2022-11-29T14:10:04,419 copying build/lib/medspacy/section_detection/sectionizer.py -> build/bdist.linux-armv7l/wheel/medspacy/section_detection 2022-11-29T14:10:04,422 copying build/lib/medspacy/section_detection/__init__.py -> build/bdist.linux-armv7l/wheel/medspacy/section_detection 2022-11-29T14:10:04,423 copying build/lib/medspacy/section_detection/section_rule.py -> build/bdist.linux-armv7l/wheel/medspacy/section_detection 2022-11-29T14:10:04,425 copying build/lib/medspacy/section_detection/util.py -> build/bdist.linux-armv7l/wheel/medspacy/section_detection 2022-11-29T14:10:04,427 copying build/lib/medspacy/section_detection/section.py -> build/bdist.linux-armv7l/wheel/medspacy/section_detection 2022-11-29T14:10:04,429 copying build/lib/medspacy/components.py -> build/bdist.linux-armv7l/wheel/medspacy 2022-11-29T14:10:04,431 creating build/bdist.linux-armv7l/wheel/tests 2022-11-29T14:10:04,432 copying build/lib/tests/test_medspacy.py -> build/bdist.linux-armv7l/wheel/tests 2022-11-29T14:10:04,434 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2022-11-29T14:10:04,436 copying build/lib/tests/test_extensions.py -> build/bdist.linux-armv7l/wheel/tests 2022-11-29T14:10:04,438 copying build/lib/tests/test_notebooks.py -> build/bdist.linux-armv7l/wheel/tests 2022-11-29T14:10:04,439 running install_egg_info 2022-11-29T14:10:04,501 running egg_info 2022-11-29T14:10:04,526 writing medspacy.egg-info/PKG-INFO 2022-11-29T14:10:04,528 writing dependency_links to medspacy.egg-info/dependency_links.txt 2022-11-29T14:10:04,530 writing requirements to medspacy.egg-info/requires.txt 2022-11-29T14:10:04,531 writing top-level names to medspacy.egg-info/top_level.txt 2022-11-29T14:10:04,573 reading manifest file 'medspacy.egg-info/SOURCES.txt' 2022-11-29T14:10:04,578 adding license file 'LICENSE' 2022-11-29T14:10:04,586 writing manifest file 'medspacy.egg-info/SOURCES.txt' 2022-11-29T14:10:04,589 Copying medspacy.egg-info to build/bdist.linux-armv7l/wheel/medspacy-1.0.1-py3.9.egg-info 2022-11-29T14:10:04,599 running install_scripts 2022-11-29T14:10:04,675 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2022-11-29T14:10:04,679 creating build/bdist.linux-armv7l/wheel/medspacy-1.0.1.dist-info/WHEEL 2022-11-29T14:10:04,682 creating '/tmp/pip-wheel-7m1jpbtq/medspacy-1.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2022-11-29T14:10:04,684 adding 'medspacy/__init__.py' 2022-11-29T14:10:04,686 adding 'medspacy/_extensions.py' 2022-11-29T14:10:04,687 adding 'medspacy/_version.py' 2022-11-29T14:10:04,688 adding 'medspacy/components.py' 2022-11-29T14:10:04,689 adding 'medspacy/custom_tokenizer.py' 2022-11-29T14:10:04,690 adding 'medspacy/ner.py' 2022-11-29T14:10:04,691 adding 'medspacy/sentence_splitting.py' 2022-11-29T14:10:04,693 adding 'medspacy/util.py' 2022-11-29T14:10:04,695 adding 'medspacy/visualization.py' 2022-11-29T14:10:04,696 adding 'medspacy/common/__init__.py' 2022-11-29T14:10:04,698 adding 'medspacy/common/base_rule.py' 2022-11-29T14:10:04,699 adding 'medspacy/common/medspacy_matcher.py' 2022-11-29T14:10:04,701 adding 'medspacy/common/regex_matcher.py' 2022-11-29T14:10:04,702 adding 'medspacy/common/util.py' 2022-11-29T14:10:04,704 adding 'medspacy/context/__init__.py' 2022-11-29T14:10:04,706 adding 'medspacy/context/context.py' 2022-11-29T14:10:04,707 adding 'medspacy/context/context_graph.py' 2022-11-29T14:10:04,710 adding 'medspacy/context/context_modifier.py' 2022-11-29T14:10:04,711 adding 'medspacy/context/context_rule.py' 2022-11-29T14:10:04,713 adding 'medspacy/context/util.py' 2022-11-29T14:10:04,714 adding 'medspacy/io/__init__.py' 2022-11-29T14:10:04,716 adding 'medspacy/io/config_example.py' 2022-11-29T14:10:04,717 adding 'medspacy/io/db.py' 2022-11-29T14:10:04,718 adding 'medspacy/io/db_connect.py' 2022-11-29T14:10:04,719 adding 'medspacy/io/db_reader.py' 2022-11-29T14:10:04,721 adding 'medspacy/io/db_writer.py' 2022-11-29T14:10:04,722 adding 'medspacy/io/doc_consumer.py' 2022-11-29T14:10:04,724 adding 'medspacy/io/pipeline.py' 2022-11-29T14:10:04,725 adding 'medspacy/postprocess/__init__.py' 2022-11-29T14:10:04,727 adding 'medspacy/postprocess/postprocessing_functions.py' 2022-11-29T14:10:04,728 adding 'medspacy/postprocess/postprocessing_pattern.py' 2022-11-29T14:10:04,730 adding 'medspacy/postprocess/postprocessing_rule.py' 2022-11-29T14:10:04,731 adding 'medspacy/postprocess/postprocessor.py' 2022-11-29T14:10:04,733 adding 'medspacy/preprocess/__init__.py' 2022-11-29T14:10:04,734 adding 'medspacy/preprocess/preprocessing_rule.py' 2022-11-29T14:10:04,735 adding 'medspacy/preprocess/preprocessor.py' 2022-11-29T14:10:04,737 adding 'medspacy/section_detection/__init__.py' 2022-11-29T14:10:04,738 adding 'medspacy/section_detection/section.py' 2022-11-29T14:10:04,740 adding 'medspacy/section_detection/section_rule.py' 2022-11-29T14:10:04,743 adding 'medspacy/section_detection/sectionizer.py' 2022-11-29T14:10:04,744 adding 'medspacy/section_detection/util.py' 2022-11-29T14:10:04,746 adding 'medspacy/target_matcher/__init__.py' 2022-11-29T14:10:04,747 adding 'medspacy/target_matcher/concept_tagger.py' 2022-11-29T14:10:04,748 adding 'medspacy/target_matcher/target_matcher.py' 2022-11-29T14:10:04,750 adding 'medspacy/target_matcher/target_rule.py' 2022-11-29T14:10:04,754 adding 'resources/context_rules.json' 2022-11-29T14:10:04,757 adding 'resources/rush_rules.tsv' 2022-11-29T14:10:04,758 adding 'resources/section_patterns.json' 2022-11-29T14:10:04,761 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/README.md' 2022-11-29T14:10:04,762 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/database_backend.flag' 2022-11-29T14:10:04,763 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/language.flag' 2022-11-29T14:10:04,764 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/lowercase.flag' 2022-11-29T14:10:04,765 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/normalize-unicode.flag' 2022-11-29T14:10:04,767 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db/cui.unqlite' 2022-11-29T14:10:04,768 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/cui-semtypes.db/semtypes.unqlite' 2022-11-29T14:10:04,771 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring' 2022-11-29T14:10:04,772 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.120.cdb' 2022-11-29T14:10:04,774 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.14.cdb' 2022-11-29T14:10:04,775 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.15.cdb' 2022-11-29T14:10:04,776 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.17.cdb' 2022-11-29T14:10:04,777 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.20.cdb' 2022-11-29T14:10:04,779 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.21.cdb' 2022-11-29T14:10:04,780 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.22.cdb' 2022-11-29T14:10:04,781 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.24.cdb' 2022-11-29T14:10:04,782 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.26.cdb' 2022-11-29T14:10:04,784 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.27.cdb' 2022-11-29T14:10:04,785 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.28.cdb' 2022-11-29T14:10:04,787 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.29.cdb' 2022-11-29T14:10:04,788 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.30.cdb' 2022-11-29T14:10:04,790 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.31.cdb' 2022-11-29T14:10:04,791 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.32.cdb' 2022-11-29T14:10:04,792 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.33.cdb' 2022-11-29T14:10:04,794 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.35.cdb' 2022-11-29T14:10:04,795 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.37.cdb' 2022-11-29T14:10:04,796 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.38.cdb' 2022-11-29T14:10:04,798 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.39.cdb' 2022-11-29T14:10:04,799 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.40.cdb' 2022-11-29T14:10:04,801 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.43.cdb' 2022-11-29T14:10:04,802 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.79.cdb' 2022-11-29T14:10:04,803 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_POSIX_unqlite/umls-simstring.db/umls-terms.simstring.8.cdb' 2022-11-29T14:10:04,805 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/README.md' 2022-11-29T14:10:04,806 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/database_backend.flag' 2022-11-29T14:10:04,807 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/language.flag' 2022-11-29T14:10:04,808 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/lowercase.flag' 2022-11-29T14:10:04,809 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/normalize-unicode.flag' 2022-11-29T14:10:04,811 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db/cui.unqlite' 2022-11-29T14:10:04,813 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/cui-semtypes.db/semtypes.unqlite' 2022-11-29T14:10:04,815 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring' 2022-11-29T14:10:04,816 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.120.cdb' 2022-11-29T14:10:04,818 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.14.cdb' 2022-11-29T14:10:04,819 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.15.cdb' 2022-11-29T14:10:04,820 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.17.cdb' 2022-11-29T14:10:04,821 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.20.cdb' 2022-11-29T14:10:04,823 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.21.cdb' 2022-11-29T14:10:04,824 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.22.cdb' 2022-11-29T14:10:04,825 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.24.cdb' 2022-11-29T14:10:04,826 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.26.cdb' 2022-11-29T14:10:04,828 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.27.cdb' 2022-11-29T14:10:04,829 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.28.cdb' 2022-11-29T14:10:04,830 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.29.cdb' 2022-11-29T14:10:04,832 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.30.cdb' 2022-11-29T14:10:04,833 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.31.cdb' 2022-11-29T14:10:04,835 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.32.cdb' 2022-11-29T14:10:04,836 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.33.cdb' 2022-11-29T14:10:04,837 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.35.cdb' 2022-11-29T14:10:04,839 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.37.cdb' 2022-11-29T14:10:04,840 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.38.cdb' 2022-11-29T14:10:04,841 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.39.cdb' 2022-11-29T14:10:04,843 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.40.cdb' 2022-11-29T14:10:04,844 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.43.cdb' 2022-11-29T14:10:04,845 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.79.cdb' 2022-11-29T14:10:04,846 adding 'resources/quickumls/QuickUMLS_SAMPLE_lowercase_Windows_unqlite/umls-simstring.db/umls-terms.simstring.8.cdb' 2022-11-29T14:10:04,848 adding 'tests/__init__.py' 2022-11-29T14:10:04,850 adding 'tests/test_extensions.py' 2022-11-29T14:10:04,851 adding 'tests/test_medspacy.py' 2022-11-29T14:10:04,852 adding 'tests/test_notebooks.py' 2022-11-29T14:10:04,854 adding 'medspacy-1.0.1.dist-info/LICENSE' 2022-11-29T14:10:04,855 adding 'medspacy-1.0.1.dist-info/METADATA' 2022-11-29T14:10:04,856 adding 'medspacy-1.0.1.dist-info/WHEEL' 2022-11-29T14:10:04,857 adding 'medspacy-1.0.1.dist-info/top_level.txt' 2022-11-29T14:10:04,859 adding 'medspacy-1.0.1.dist-info/RECORD' 2022-11-29T14:10:04,864 removing build/bdist.linux-armv7l/wheel 2022-11-29T14:10:05,040 Building wheel for medspacy (setup.py): finished with status 'done' 2022-11-29T14:10:05,044 Created wheel for medspacy: filename=medspacy-1.0.1-py3-none-any.whl size=146947 sha256=7c939e3d64a56e90e8678b95e451254569396111e99aef0af6d4df43ca222a76 2022-11-29T14:10:05,045 Stored in directory: /tmp/pip-ephem-wheel-cache-ry0ykw_8/wheels/22/2f/3b/fe59404017e3bb509f7e4b255bf4b11590a809ce6e63331d88 2022-11-29T14:10:05,078 Successfully built medspacy 2022-11-29T14:10:05,087 Removed build tracker: '/tmp/pip-build-tracker-4fs8eskt'