2023-02-24T17:10:05,266 Created temporary directory: /tmp/pip-ephem-wheel-cache-vv570ubp
2023-02-24T17:10:05,269 Created temporary directory: /tmp/pip-build-tracker-pi157umb
2023-02-24T17:10:05,269 Initialized build tracking at /tmp/pip-build-tracker-pi157umb
2023-02-24T17:10:05,270 Created build tracker: /tmp/pip-build-tracker-pi157umb
2023-02-24T17:10:05,270 Entered build tracker: /tmp/pip-build-tracker-pi157umb
2023-02-24T17:10:05,270 Created temporary directory: /tmp/pip-wheel-ff3s6pc9
2023-02-24T17:10:05,275 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-02-24T17:10:05,278 Created temporary directory: /tmp/pip-ephem-wheel-cache-v8rmdgqk
2023-02-24T17:10:05,306 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-02-24T17:10:05,309 2 location(s) to search for versions of napari-bacseg:
2023-02-24T17:10:05,309 * https://pypi.org/simple/napari-bacseg/
2023-02-24T17:10:05,309 * https://www.piwheels.org/simple/napari-bacseg/
2023-02-24T17:10:05,309 Fetching project page and analyzing links: https://pypi.org/simple/napari-bacseg/
2023-02-24T17:10:05,310 Getting page https://pypi.org/simple/napari-bacseg/
2023-02-24T17:10:05,312 Found index url https://pypi.org/simple
2023-02-24T17:10:05,484 Fetched page https://pypi.org/simple/napari-bacseg/ as application/vnd.pypi.simple.v1+json
2023-02-24T17:10:05,486   Found link https://files.pythonhosted.org/packages/45/85/fc51f80f1a04202590c5f6710e5ad9c2324fb37d6653685fadd3cddbb67c/napari-bacseg-1.0.0.tar.gz (from https://pypi.org/simple/napari-bacseg/) (requires-python:>=3.9), version: 1.0.0
2023-02-24T17:10:05,486   Skipping link: No binaries permitted for napari-bacseg: https://files.pythonhosted.org/packages/0e/5a/6890fc35b8b307abf558d96a14d6ea8a08c518d1d0097f92cb02c789d01f/napari_bacseg-1.0.0-py3-none-any.whl (from https://pypi.org/simple/napari-bacseg/) (requires-python:>=3.9)
2023-02-24T17:10:05,487   Found link https://files.pythonhosted.org/packages/f5/ef/c1e72fb189125312c0de794fc0c0f2bbf0e71139049997577171e1a10ab1/napari-bacseg-1.0.1.tar.gz (from https://pypi.org/simple/napari-bacseg/) (requires-python:>=3.9), version: 1.0.1
2023-02-24T17:10:05,487   Skipping link: No binaries permitted for napari-bacseg: https://files.pythonhosted.org/packages/88/85/92a8f05a2f8a9a06c1fde56d717dd8712b44eb706d8e0cd9f29844576154/napari_bacseg-1.0.1-py3-none-any.whl (from https://pypi.org/simple/napari-bacseg/) (requires-python:>=3.9)
2023-02-24T17:10:05,487 Fetching project page and analyzing links: https://www.piwheels.org/simple/napari-bacseg/
2023-02-24T17:10:05,488 Getting page https://www.piwheels.org/simple/napari-bacseg/
2023-02-24T17:10:05,489 Found index url https://www.piwheels.org/simple
2023-02-24T17:10:05,652 Fetched page https://www.piwheels.org/simple/napari-bacseg/ as text/html
2023-02-24T17:10:05,654 Skipping link: not a file: https://www.piwheels.org/simple/napari-bacseg/
2023-02-24T17:10:05,655 Skipping link: not a file: https://pypi.org/simple/napari-bacseg/
2023-02-24T17:10:05,699 Given no hashes to check 1 links for project 'napari-bacseg': discarding no candidates
2023-02-24T17:10:05,732 Collecting napari-bacseg==1.0.0
2023-02-24T17:10:05,734   Created temporary directory: /tmp/pip-unpack-8g041mq8
2023-02-24T17:10:05,920   Downloading napari-bacseg-1.0.0.tar.gz (201 kB)
2023-02-24T17:10:06,194   Added napari-bacseg==1.0.0 from https://files.pythonhosted.org/packages/45/85/fc51f80f1a04202590c5f6710e5ad9c2324fb37d6653685fadd3cddbb67c/napari-bacseg-1.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-pi157umb'
2023-02-24T17:10:06,201   Created temporary directory: /tmp/pip-build-env-bshi4t52
2023-02-24T17:10:06,212   Installing build dependencies: started
2023-02-24T17:10:06,213   Running command pip subprocess to install build dependencies
2023-02-24T17:10:07,435   Using pip 23.0.1 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-02-24T17:10:08,009   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-02-24T17:10:08,035   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-02-24T17:10:09,726   Collecting setuptools>=42.0.0
2023-02-24T17:10:09,866     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.4.0-py3-none-any.whl (1.1 MB)
2023-02-24T17:10:10,129   Collecting wheel
2023-02-24T17:10:10,147     Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB)
2023-02-24T17:10:10,938   Collecting setuptools_scm
2023-02-24T17:10:10,955     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-7.1.0-py3-none-any.whl (43 kB)
2023-02-24T17:10:11,117   Collecting tomli>=1.0.0
2023-02-24T17:10:11,136     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2023-02-24T17:10:11,310   Collecting packaging>=20.0
2023-02-24T17:10:11,328     Using cached https://www.piwheels.org/simple/packaging/packaging-23.0-py3-none-any.whl (42 kB)
2023-02-24T17:10:11,432   Collecting typing-extensions
2023-02-24T17:10:11,448     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.5.0-py3-none-any.whl (27 kB)
2023-02-24T17:10:13,249   Installing collected packages: wheel, typing-extensions, tomli, setuptools, packaging, setuptools_scm
2023-02-24T17:10:13,392     Creating /tmp/pip-build-env-bshi4t52/overlay/bin
2023-02-24T17:10:13,395     changing mode of /tmp/pip-build-env-bshi4t52/overlay/bin/wheel to 755
2023-02-24T17:10:16,014   Successfully installed packaging-23.0 setuptools-67.4.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.5.0 wheel-0.38.4
2023-02-24T17:10:16,517   Installing build dependencies: finished with status 'done'
2023-02-24T17:10:16,522   Getting requirements to build wheel: started
2023-02-24T17:10:16,523   Running command Getting requirements to build wheel
2023-02-24T17:10:17,131   Getting requirements to build wheel: finished with status 'done'
2023-02-24T17:10:17,146   Created temporary directory: /tmp/pip-modern-metadata-3wxcft7e
2023-02-24T17:10:17,149   Preparing metadata (pyproject.toml): started
2023-02-24T17:10:17,150   Running command Preparing metadata (pyproject.toml)
2023-02-24T17:10:17,784   /tmp/pip-build-env-bshi4t52/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'license' defined outside of `pyproject.toml` would be ignored.
2023-02-24T17:10:17,785       !!


2023-02-24T17:10:17,786       ##########################################################################
2023-02-24T17:10:17,786       # configuration would be ignored/result in error due to `pyproject.toml` #
2023-02-24T17:10:17,786       ##########################################################################

2023-02-24T17:10:17,786       The following seems to be defined outside of `pyproject.toml`:

2023-02-24T17:10:17,786       `license = 'BSD-3-Clause'`

2023-02-24T17:10:17,787       According to the spec (see the link below), however, setuptools CANNOT
2023-02-24T17:10:17,787       consider this value unless 'license' is listed as `dynamic`.

2023-02-24T17:10:17,787       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2023-02-24T17:10:17,788       For the time being, `setuptools` will still consider the given value (as a
2023-02-24T17:10:17,788       **transitional** measure), but please note that future releases of setuptools will
2023-02-24T17:10:17,788       follow strictly the standard.

2023-02-24T17:10:17,788       To prevent this warning, you can list 'license' under `dynamic` or alternatively
2023-02-24T17:10:17,788       remove the `[project]` table from your file and rely entirely on other means of
2023-02-24T17:10:17,788       configuration.


2023-02-24T17:10:17,789   !!

2023-02-24T17:10:17,789     warnings.warn(msg, _WouldIgnoreField)
2023-02-24T17:10:17,789   /tmp/pip-build-env-bshi4t52/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'entry-points' defined outside of `pyproject.toml` would be ignored.
2023-02-24T17:10:17,789       !!


2023-02-24T17:10:17,790       ##########################################################################
2023-02-24T17:10:17,790       # configuration would be ignored/result in error due to `pyproject.toml` #
2023-02-24T17:10:17,790       ##########################################################################

2023-02-24T17:10:17,790       The following seems to be defined outside of `pyproject.toml`:

2023-02-24T17:10:17,791       `entry-points = {'napari.manifest': ['napari-bacseg = napari_bacseg:napari.yaml']}`

2023-02-24T17:10:17,791       According to the spec (see the link below), however, setuptools CANNOT
2023-02-24T17:10:17,791       consider this value unless 'entry-points' is listed as `dynamic`.

2023-02-24T17:10:17,791       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2023-02-24T17:10:17,791       For the time being, `setuptools` will still consider the given value (as a
2023-02-24T17:10:17,792       **transitional** measure), but please note that future releases of setuptools will
2023-02-24T17:10:17,792       follow strictly the standard.

2023-02-24T17:10:17,792       To prevent this warning, you can list 'entry-points' under `dynamic` or alternatively
2023-02-24T17:10:17,792       remove the `[project]` table from your file and rely entirely on other means of
2023-02-24T17:10:17,792       configuration.


2023-02-24T17:10:17,793   !!

2023-02-24T17:10:17,793     warnings.warn(msg, _WouldIgnoreField)
2023-02-24T17:10:18,100   running dist_info
2023-02-24T17:10:18,107   creating /tmp/pip-modern-metadata-3wxcft7e/napari_bacseg.egg-info
2023-02-24T17:10:18,113   writing /tmp/pip-modern-metadata-3wxcft7e/napari_bacseg.egg-info/PKG-INFO
2023-02-24T17:10:18,116   writing dependency_links to /tmp/pip-modern-metadata-3wxcft7e/napari_bacseg.egg-info/dependency_links.txt
2023-02-24T17:10:18,118   writing entry points to /tmp/pip-modern-metadata-3wxcft7e/napari_bacseg.egg-info/entry_points.txt
2023-02-24T17:10:18,120   writing requirements to /tmp/pip-modern-metadata-3wxcft7e/napari_bacseg.egg-info/requires.txt
2023-02-24T17:10:18,121   writing top-level names to /tmp/pip-modern-metadata-3wxcft7e/napari_bacseg.egg-info/top_level.txt
2023-02-24T17:10:18,123   writing manifest file '/tmp/pip-modern-metadata-3wxcft7e/napari_bacseg.egg-info/SOURCES.txt'
2023-02-24T17:10:18,173   listing git files failed - pretending there aren't any
2023-02-24T17:10:18,183   reading manifest file '/tmp/pip-modern-metadata-3wxcft7e/napari_bacseg.egg-info/SOURCES.txt'
2023-02-24T17:10:18,186   reading manifest template 'MANIFEST.in'
2023-02-24T17:10:18,188   warning: no previously-included files matching '__pycache__' found under directory '*'
2023-02-24T17:10:18,189   warning: no previously-included files matching '*.py[co]' found under directory '*'
2023-02-24T17:10:18,189   adding license file 'LICENSE'
2023-02-24T17:10:18,194   writing manifest file '/tmp/pip-modern-metadata-3wxcft7e/napari_bacseg.egg-info/SOURCES.txt'
2023-02-24T17:10:18,195   creating '/tmp/pip-modern-metadata-3wxcft7e/napari_bacseg-1.0.0.dist-info'
2023-02-24T17:10:18,359   Preparing metadata (pyproject.toml): finished with status 'done'
2023-02-24T17:10:18,366   Source in /tmp/pip-wheel-ff3s6pc9/napari-bacseg_263835cd07b8414c8605585a5708e102 has version 1.0.0, which satisfies requirement napari-bacseg==1.0.0 from https://files.pythonhosted.org/packages/45/85/fc51f80f1a04202590c5f6710e5ad9c2324fb37d6653685fadd3cddbb67c/napari-bacseg-1.0.0.tar.gz
2023-02-24T17:10:18,367   Removed napari-bacseg==1.0.0 from https://files.pythonhosted.org/packages/45/85/fc51f80f1a04202590c5f6710e5ad9c2324fb37d6653685fadd3cddbb67c/napari-bacseg-1.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-pi157umb'
2023-02-24T17:10:18,374 Created temporary directory: /tmp/pip-unpack-cjjmo2kx
2023-02-24T17:10:18,375 Building wheels for collected packages: napari-bacseg
2023-02-24T17:10:18,379   Created temporary directory: /tmp/pip-wheel-y7hb2qcf
2023-02-24T17:10:18,380   Destination directory: /tmp/pip-wheel-y7hb2qcf
2023-02-24T17:10:18,382   Building wheel for napari-bacseg (pyproject.toml): started
2023-02-24T17:10:18,383   Running command Building wheel for napari-bacseg (pyproject.toml)
2023-02-24T17:10:19,028   /tmp/pip-build-env-bshi4t52/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'license' defined outside of `pyproject.toml` would be ignored.
2023-02-24T17:10:19,029       !!


2023-02-24T17:10:19,030       ##########################################################################
2023-02-24T17:10:19,030       # configuration would be ignored/result in error due to `pyproject.toml` #
2023-02-24T17:10:19,030       ##########################################################################

2023-02-24T17:10:19,030       The following seems to be defined outside of `pyproject.toml`:

2023-02-24T17:10:19,030       `license = 'BSD-3-Clause'`

2023-02-24T17:10:19,031       According to the spec (see the link below), however, setuptools CANNOT
2023-02-24T17:10:19,031       consider this value unless 'license' is listed as `dynamic`.

2023-02-24T17:10:19,031       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2023-02-24T17:10:19,032       For the time being, `setuptools` will still consider the given value (as a
2023-02-24T17:10:19,032       **transitional** measure), but please note that future releases of setuptools will
2023-02-24T17:10:19,032       follow strictly the standard.

2023-02-24T17:10:19,032       To prevent this warning, you can list 'license' under `dynamic` or alternatively
2023-02-24T17:10:19,032       remove the `[project]` table from your file and rely entirely on other means of
2023-02-24T17:10:19,032       configuration.


2023-02-24T17:10:19,033   !!

2023-02-24T17:10:19,033     warnings.warn(msg, _WouldIgnoreField)
2023-02-24T17:10:19,033   /tmp/pip-build-env-bshi4t52/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:103: _WouldIgnoreField: 'entry-points' defined outside of `pyproject.toml` would be ignored.
2023-02-24T17:10:19,033       !!


2023-02-24T17:10:19,034       ##########################################################################
2023-02-24T17:10:19,034       # configuration would be ignored/result in error due to `pyproject.toml` #
2023-02-24T17:10:19,034       ##########################################################################

2023-02-24T17:10:19,034       The following seems to be defined outside of `pyproject.toml`:

2023-02-24T17:10:19,034       `entry-points = {'napari.manifest': ['napari-bacseg = napari_bacseg:napari.yaml']}`

2023-02-24T17:10:19,035       According to the spec (see the link below), however, setuptools CANNOT
2023-02-24T17:10:19,035       consider this value unless 'entry-points' is listed as `dynamic`.

2023-02-24T17:10:19,035       https://packaging.python.org/en/latest/specifications/declaring-project-metadata/

2023-02-24T17:10:19,035       For the time being, `setuptools` will still consider the given value (as a
2023-02-24T17:10:19,035       **transitional** measure), but please note that future releases of setuptools will
2023-02-24T17:10:19,035       follow strictly the standard.

2023-02-24T17:10:19,036       To prevent this warning, you can list 'entry-points' under `dynamic` or alternatively
2023-02-24T17:10:19,036       remove the `[project]` table from your file and rely entirely on other means of
2023-02-24T17:10:19,036       configuration.


2023-02-24T17:10:19,036   !!

2023-02-24T17:10:19,037     warnings.warn(msg, _WouldIgnoreField)
2023-02-24T17:10:19,323   running bdist_wheel
2023-02-24T17:10:19,344   running build
2023-02-24T17:10:19,344   running build_py
2023-02-24T17:10:19,352   creating build
2023-02-24T17:10:19,352   creating build/lib
2023-02-24T17:10:19,353   creating build/lib/napari_bacseg
2023-02-24T17:10:19,355   copying src/napari_bacseg/_utils_database.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,357   copying src/napari_bacseg/_utils_cellpose.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,360   copying src/napari_bacseg/gapseq_ui.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,362   copying src/napari_bacseg/_utils_refine.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,363   copying src/napari_bacseg/_utils_colicoords.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,366   copying src/napari_bacseg/_utils_interface_events.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,369   copying src/napari_bacseg/_widget.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,373   copying src/napari_bacseg/_version.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,375   copying src/napari_bacseg/_utils_statistics.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,378   copying src/napari_bacseg/_utils.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,381   copying src/napari_bacseg/napari_ui.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,383   copying src/napari_bacseg/_utils_tiler.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,385   copying src/napari_bacseg/bacseg_ui.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,390   copying src/napari_bacseg/_utils_json.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,392   copying src/napari_bacseg/_utils_oufti.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,395   copying src/napari_bacseg/_utils_imagej.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,397   copying src/napari_bacseg/_utils_database_IO.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,400   copying src/napari_bacseg/__init__.py -> build/lib/napari_bacseg
2023-02-24T17:10:19,404   creating build/lib/_dev
2023-02-24T17:10:19,406   copying src/_dev/akseg_dev2.py -> build/lib/_dev
2023-02-24T17:10:19,408   copying src/_dev/rebuild_usermeta.py -> build/lib/_dev
2023-02-24T17:10:19,410   copying src/_dev/cellposeshapely.py -> build/lib/_dev
2023-02-24T17:10:19,412   copying src/_dev/fix_alison_missing_file_list.py -> build/lib/_dev
2023-02-24T17:10:19,414   copying src/_dev/updade_akseg_metadata.py -> build/lib/_dev
2023-02-24T17:10:19,416   copying src/_dev/oufti_dilate.py -> build/lib/_dev
2023-02-24T17:10:19,419   copying src/_dev/get_species_info.py -> build/lib/_dev
2023-02-24T17:10:19,420   copying src/_dev/read_non_tif.py -> build/lib/_dev
2023-02-24T17:10:19,422   copying src/_dev/zooniverse_move.py -> build/lib/_dev
2023-02-24T17:10:19,424   copying src/_dev/generate_scanr_movie.py -> build/lib/_dev
2023-02-24T17:10:19,426   copying src/_dev/move_pillar_zstack_data.py -> build/lib/_dev
2023-02-24T17:10:19,429   copying src/_dev/omnipose_midlines.py -> build/lib/_dev
2023-02-24T17:10:19,431   copying src/_dev/video_iamges.py -> build/lib/_dev
2023-02-24T17:10:19,433   copying src/_dev/stelios_stats.py -> build/lib/_dev
2023-02-24T17:10:19,435   copying src/_dev/nim_dev.py -> build/lib/_dev
2023-02-24T17:10:19,437   copying src/_dev/database_dev.py -> build/lib/_dev
2023-02-24T17:10:19,440   copying src/_dev/rebuild_usermeta_2.py -> build/lib/_dev
2023-02-24T17:10:19,442   copying src/_dev/colicoords_ldist_dev.py -> build/lib/_dev
2023-02-24T17:10:19,444   copying src/_dev/align_alex_datadump.py -> build/lib/_dev
2023-02-24T17:10:19,446   copying src/_dev/zooniverse.py -> build/lib/_dev
2023-02-24T17:10:19,449   copying src/_dev/sort_midlines.py -> build/lib/_dev
2023-02-24T17:10:19,451   copying src/_dev/process_alex_datadump_clinical.py -> build/lib/_dev
2023-02-24T17:10:19,454   copying src/_dev/update_img_metadata.py -> build/lib/_dev
2023-02-24T17:10:19,456   copying src/_dev/oufti_dilate_with_midlines.py -> build/lib/_dev
2023-02-24T17:10:19,459   copying src/_dev/process_conor_datadump.py -> build/lib/_dev
2023-02-24T17:10:19,462   copying src/_dev/luke__script.py -> build/lib/_dev
2023-02-24T17:10:19,464   copying src/_dev/omnipose_dev.py -> build/lib/_dev
2023-02-24T17:10:19,465   copying src/_dev/get_akseg_stats.py -> build/lib/_dev
2023-02-24T17:10:19,468   copying src/_dev/Troodos dev.py -> build/lib/_dev
2023-02-24T17:10:19,470   copying src/_dev/tiler_dev.py -> build/lib/_dev
2023-02-24T17:10:19,472   copying src/_dev/alison_datadump.py -> build/lib/_dev
2023-02-24T17:10:19,475   copying src/_dev/Export Masks to AKSEG v5 dev.py -> build/lib/_dev
2023-02-24T17:10:19,476   copying src/_dev/akseg_dev.py -> build/lib/_dev
2023-02-24T17:10:19,478   copying src/_dev/move_pillar_data.py -> build/lib/_dev
2023-02-24T17:10:19,482   copying src/_dev/ScanR dev.py -> build/lib/_dev
2023-02-24T17:10:19,484   copying src/_dev/new_metadata2.pickle.py -> build/lib/_dev
2023-02-24T17:10:19,486   copying src/_dev/process_gramstain_datadump.py -> build/lib/_dev
2023-02-24T17:10:19,489   copying src/_dev/akseg_db_stats.py -> build/lib/_dev
2023-02-24T17:10:19,491   copying src/_dev/move_unlearning_files.py -> build/lib/_dev
2023-02-24T17:10:19,495   copying src/_dev/check_metadata.py -> build/lib/_dev
2023-02-24T17:10:19,497   copying src/_dev/autocontast_dev.py -> build/lib/_dev
2023-02-24T17:10:19,499   copying src/_dev/matplotlib_Events.py -> build/lib/_dev
2023-02-24T17:10:19,501   copying src/_dev/fits_dev.py -> build/lib/_dev
2023-02-24T17:10:19,503   copying src/_dev/akseg_txt_metadata.py -> build/lib/_dev
2023-02-24T17:10:19,506   copying src/_dev/colicoords_cellldist_dev.py -> build/lib/_dev
2023-02-24T17:10:19,507   copying src/_dev/__init__.py -> build/lib/_dev
2023-02-24T17:10:19,509   copying src/_dev/process_alex_datadump.py -> build/lib/_dev
2023-02-24T17:10:19,512   copying src/_dev/new_read_akseg_directory.py -> build/lib/_dev
2023-02-24T17:10:19,514   copying src/_dev/cellposedev.py -> build/lib/_dev
2023-02-24T17:10:19,516   copying src/_dev/tile_meta_check.py -> build/lib/_dev
2023-02-24T17:10:19,517   copying src/_dev/omnipose_train.py -> build/lib/_dev
2023-02-24T17:10:19,520   creating build/lib/napari_bacseg/_tests
2023-02-24T17:10:19,521   copying src/napari_bacseg/_tests/test_widget.py -> build/lib/napari_bacseg/_tests
2023-02-24T17:10:19,522   copying src/napari_bacseg/_tests/__init__.py -> build/lib/napari_bacseg/_tests
2023-02-24T17:10:19,523   running egg_info
2023-02-24T17:10:19,536   writing src/napari_bacseg.egg-info/PKG-INFO
2023-02-24T17:10:19,538   writing dependency_links to src/napari_bacseg.egg-info/dependency_links.txt
2023-02-24T17:10:19,540   writing entry points to src/napari_bacseg.egg-info/entry_points.txt
2023-02-24T17:10:19,542   writing requirements to src/napari_bacseg.egg-info/requires.txt
2023-02-24T17:10:19,543   writing top-level names to src/napari_bacseg.egg-info/top_level.txt
2023-02-24T17:10:19,580   listing git files failed - pretending there aren't any
2023-02-24T17:10:19,589   reading manifest file 'src/napari_bacseg.egg-info/SOURCES.txt'
2023-02-24T17:10:19,594   reading manifest template 'MANIFEST.in'
2023-02-24T17:10:19,596   warning: no previously-included files matching '__pycache__' found under directory '*'
2023-02-24T17:10:19,597   warning: no previously-included files matching '*.py[co]' found under directory '*'
2023-02-24T17:10:19,598   adding license file 'LICENSE'
2023-02-24T17:10:19,604   writing manifest file 'src/napari_bacseg.egg-info/SOURCES.txt'
2023-02-24T17:10:19,610   copying src/napari_bacseg/bacseg_ui.ui -> build/lib/napari_bacseg
2023-02-24T17:10:19,615   copying src/napari_bacseg/napari.yaml -> build/lib/napari_bacseg
2023-02-24T17:10:19,635   installing to build/bdist.linux-armv7l/wheel
2023-02-24T17:10:19,635   running install
2023-02-24T17:10:19,660   running install_lib
2023-02-24T17:10:19,667   creating build/bdist.linux-armv7l
2023-02-24T17:10:19,667   creating build/bdist.linux-armv7l/wheel
2023-02-24T17:10:19,669   creating build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,670   copying build/lib/napari_bacseg/_utils_database.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,673   creating build/bdist.linux-armv7l/wheel/napari_bacseg/_tests
2023-02-24T17:10:19,674   copying build/lib/napari_bacseg/_tests/test_widget.py -> build/bdist.linux-armv7l/wheel/napari_bacseg/_tests
2023-02-24T17:10:19,676   copying build/lib/napari_bacseg/_tests/__init__.py -> build/bdist.linux-armv7l/wheel/napari_bacseg/_tests
2023-02-24T17:10:19,678   copying build/lib/napari_bacseg/_utils_cellpose.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,680   copying build/lib/napari_bacseg/gapseq_ui.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,682   copying build/lib/napari_bacseg/_utils_refine.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,684   copying build/lib/napari_bacseg/_utils_colicoords.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,687   copying build/lib/napari_bacseg/_utils_interface_events.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,690   copying build/lib/napari_bacseg/_widget.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,694   copying build/lib/napari_bacseg/_version.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,695   copying build/lib/napari_bacseg/_utils_statistics.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,698   copying build/lib/napari_bacseg/_utils.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,702   copying build/lib/napari_bacseg/napari_ui.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,704   copying build/lib/napari_bacseg/bacseg_ui.ui -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,709   copying build/lib/napari_bacseg/_utils_tiler.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,712   copying build/lib/napari_bacseg/bacseg_ui.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,717   copying build/lib/napari_bacseg/_utils_json.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,719   copying build/lib/napari_bacseg/_utils_oufti.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,722   copying build/lib/napari_bacseg/_utils_imagej.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,724   copying build/lib/napari_bacseg/napari.yaml -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,725   copying build/lib/napari_bacseg/_utils_database_IO.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,728   copying build/lib/napari_bacseg/__init__.py -> build/bdist.linux-armv7l/wheel/napari_bacseg
2023-02-24T17:10:19,731   creating build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,732   copying build/lib/_dev/akseg_dev2.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,735   copying build/lib/_dev/rebuild_usermeta.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,737   copying build/lib/_dev/cellposeshapely.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,739   copying build/lib/_dev/fix_alison_missing_file_list.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,741   copying build/lib/_dev/updade_akseg_metadata.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,743   copying build/lib/_dev/oufti_dilate.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,746   copying build/lib/_dev/get_species_info.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,748   copying build/lib/_dev/read_non_tif.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,750   copying build/lib/_dev/zooniverse_move.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,752   copying build/lib/_dev/generate_scanr_movie.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,754   copying build/lib/_dev/move_pillar_zstack_data.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,757   copying build/lib/_dev/omnipose_midlines.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,759   copying build/lib/_dev/video_iamges.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,761   copying build/lib/_dev/stelios_stats.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,763   copying build/lib/_dev/nim_dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,766   copying build/lib/_dev/database_dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,768   copying build/lib/_dev/rebuild_usermeta_2.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,770   copying build/lib/_dev/colicoords_ldist_dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,772   copying build/lib/_dev/align_alex_datadump.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,774   copying build/lib/_dev/zooniverse.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,777   copying build/lib/_dev/sort_midlines.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,780   copying build/lib/_dev/process_alex_datadump_clinical.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,782   copying build/lib/_dev/update_img_metadata.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,784   copying build/lib/_dev/oufti_dilate_with_midlines.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,787   copying build/lib/_dev/process_conor_datadump.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,790   copying build/lib/_dev/luke__script.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,792   copying build/lib/_dev/omnipose_dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,794   copying build/lib/_dev/get_akseg_stats.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,797   copying build/lib/_dev/Troodos dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,799   copying build/lib/_dev/tiler_dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,801   copying build/lib/_dev/alison_datadump.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,803   copying build/lib/_dev/Export Masks to AKSEG v5 dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,805   copying build/lib/_dev/akseg_dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,807   copying build/lib/_dev/move_pillar_data.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,810   copying build/lib/_dev/ScanR dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,813   copying build/lib/_dev/new_metadata2.pickle.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,814   copying build/lib/_dev/process_gramstain_datadump.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,817   copying build/lib/_dev/akseg_db_stats.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,819   copying build/lib/_dev/move_unlearning_files.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,823   copying build/lib/_dev/check_metadata.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,825   copying build/lib/_dev/autocontast_dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,827   copying build/lib/_dev/matplotlib_Events.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,829   copying build/lib/_dev/fits_dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,831   copying build/lib/_dev/akseg_txt_metadata.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,834   copying build/lib/_dev/colicoords_cellldist_dev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,835   copying build/lib/_dev/__init__.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,837   copying build/lib/_dev/process_alex_datadump.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,840   copying build/lib/_dev/new_read_akseg_directory.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,842   copying build/lib/_dev/cellposedev.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,844   copying build/lib/_dev/tile_meta_check.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,845   copying build/lib/_dev/omnipose_train.py -> build/bdist.linux-armv7l/wheel/_dev
2023-02-24T17:10:19,847   running install_egg_info
2023-02-24T17:10:19,853   Copying src/napari_bacseg.egg-info to build/bdist.linux-armv7l/wheel/napari_bacseg-1.0.0-py3.9.egg-info
2023-02-24T17:10:19,865   running install_scripts
2023-02-24T17:10:19,892   creating build/bdist.linux-armv7l/wheel/napari_bacseg-1.0.0.dist-info/WHEEL
2023-02-24T17:10:19,894   creating '/tmp/pip-wheel-y7hb2qcf/.tmp-mvvwkzgm/napari_bacseg-1.0.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-02-24T17:10:19,898   adding '_dev/Export Masks to AKSEG v5 dev.py'
2023-02-24T17:10:19,899   adding '_dev/ScanR dev.py'
2023-02-24T17:10:19,901   adding '_dev/Troodos dev.py'
2023-02-24T17:10:19,902   adding '_dev/__init__.py'
2023-02-24T17:10:19,903   adding '_dev/akseg_db_stats.py'
2023-02-24T17:10:19,905   adding '_dev/akseg_dev.py'
2023-02-24T17:10:19,907   adding '_dev/akseg_dev2.py'
2023-02-24T17:10:19,909   adding '_dev/akseg_txt_metadata.py'
2023-02-24T17:10:19,911   adding '_dev/align_alex_datadump.py'
2023-02-24T17:10:19,914   adding '_dev/alison_datadump.py'
2023-02-24T17:10:19,916   adding '_dev/autocontast_dev.py'
2023-02-24T17:10:19,917   adding '_dev/cellposedev.py'
2023-02-24T17:10:19,919   adding '_dev/cellposeshapely.py'
2023-02-24T17:10:19,920   adding '_dev/check_metadata.py'
2023-02-24T17:10:19,921   adding '_dev/colicoords_cellldist_dev.py'
2023-02-24T17:10:19,923   adding '_dev/colicoords_ldist_dev.py'
2023-02-24T17:10:19,925   adding '_dev/database_dev.py'
2023-02-24T17:10:19,926   adding '_dev/fits_dev.py'
2023-02-24T17:10:19,928   adding '_dev/fix_alison_missing_file_list.py'
2023-02-24T17:10:19,929   adding '_dev/generate_scanr_movie.py'
2023-02-24T17:10:19,933   adding '_dev/get_akseg_stats.py'
2023-02-24T17:10:19,934   adding '_dev/get_species_info.py'
2023-02-24T17:10:19,936   adding '_dev/luke__script.py'
2023-02-24T17:10:19,937   adding '_dev/matplotlib_Events.py'
2023-02-24T17:10:19,941   adding '_dev/move_pillar_data.py'
2023-02-24T17:10:19,945   adding '_dev/move_pillar_zstack_data.py'
2023-02-24T17:10:19,951   adding '_dev/move_unlearning_files.py'
2023-02-24T17:10:19,953   adding '_dev/new_metadata2.pickle.py'
2023-02-24T17:10:19,954   adding '_dev/new_read_akseg_directory.py'
2023-02-24T17:10:19,956   adding '_dev/nim_dev.py'
2023-02-24T17:10:19,957   adding '_dev/omnipose_dev.py'
2023-02-24T17:10:19,959   adding '_dev/omnipose_midlines.py'
2023-02-24T17:10:19,960   adding '_dev/omnipose_train.py'
2023-02-24T17:10:19,964   adding '_dev/oufti_dilate.py'
2023-02-24T17:10:19,969   adding '_dev/oufti_dilate_with_midlines.py'
2023-02-24T17:10:19,973   adding '_dev/process_alex_datadump.py'
2023-02-24T17:10:19,976   adding '_dev/process_alex_datadump_clinical.py'
2023-02-24T17:10:19,980   adding '_dev/process_conor_datadump.py'
2023-02-24T17:10:19,983   adding '_dev/process_gramstain_datadump.py'
2023-02-24T17:10:19,985   adding '_dev/read_non_tif.py'
2023-02-24T17:10:19,986   adding '_dev/rebuild_usermeta.py'
2023-02-24T17:10:19,988   adding '_dev/rebuild_usermeta_2.py'
2023-02-24T17:10:19,993   adding '_dev/sort_midlines.py'
2023-02-24T17:10:19,995   adding '_dev/stelios_stats.py'
2023-02-24T17:10:19,996   adding '_dev/tile_meta_check.py'
2023-02-24T17:10:19,998   adding '_dev/tiler_dev.py'
2023-02-24T17:10:19,999   adding '_dev/updade_akseg_metadata.py'
2023-02-24T17:10:20,001   adding '_dev/update_img_metadata.py'
2023-02-24T17:10:20,002   adding '_dev/video_iamges.py'
2023-02-24T17:10:20,004   adding '_dev/zooniverse.py'
2023-02-24T17:10:20,006   adding '_dev/zooniverse_move.py'
2023-02-24T17:10:20,008   adding 'napari_bacseg/__init__.py'
2023-02-24T17:10:20,016   adding 'napari_bacseg/_utils.py'
2023-02-24T17:10:20,018   adding 'napari_bacseg/_utils_cellpose.py'
2023-02-24T17:10:20,021   adding 'napari_bacseg/_utils_colicoords.py'
2023-02-24T17:10:20,023   adding 'napari_bacseg/_utils_database.py'
2023-02-24T17:10:20,027   adding 'napari_bacseg/_utils_database_IO.py'
2023-02-24T17:10:20,029   adding 'napari_bacseg/_utils_imagej.py'
2023-02-24T17:10:20,033   adding 'napari_bacseg/_utils_interface_events.py'
2023-02-24T17:10:20,034   adding 'napari_bacseg/_utils_json.py'
2023-02-24T17:10:20,039   adding 'napari_bacseg/_utils_oufti.py'
2023-02-24T17:10:20,040   adding 'napari_bacseg/_utils_refine.py'
2023-02-24T17:10:20,043   adding 'napari_bacseg/_utils_statistics.py'
2023-02-24T17:10:20,045   adding 'napari_bacseg/_utils_tiler.py'
2023-02-24T17:10:20,046   adding 'napari_bacseg/_version.py'
2023-02-24T17:10:20,052   adding 'napari_bacseg/_widget.py'
2023-02-24T17:10:20,062   adding 'napari_bacseg/bacseg_ui.py'
2023-02-24T17:10:20,069   adding 'napari_bacseg/bacseg_ui.ui'
2023-02-24T17:10:20,071   adding 'napari_bacseg/gapseq_ui.py'
2023-02-24T17:10:20,072   adding 'napari_bacseg/napari.yaml'
2023-02-24T17:10:20,074   adding 'napari_bacseg/napari_ui.py'
2023-02-24T17:10:20,075   adding 'napari_bacseg/_tests/__init__.py'
2023-02-24T17:10:20,077   adding 'napari_bacseg/_tests/test_widget.py'
2023-02-24T17:10:20,079   adding 'napari_bacseg-1.0.0.dist-info/LICENSE'
2023-02-24T17:10:20,081   adding 'napari_bacseg-1.0.0.dist-info/METADATA'
2023-02-24T17:10:20,082   adding 'napari_bacseg-1.0.0.dist-info/WHEEL'
2023-02-24T17:10:20,083   adding 'napari_bacseg-1.0.0.dist-info/entry_points.txt'
2023-02-24T17:10:20,084   adding 'napari_bacseg-1.0.0.dist-info/top_level.txt'
2023-02-24T17:10:20,085   adding 'napari_bacseg-1.0.0.dist-info/RECORD'
2023-02-24T17:10:20,091   removing build/bdist.linux-armv7l/wheel
2023-02-24T17:10:20,223   Building wheel for napari-bacseg (pyproject.toml): finished with status 'done'
2023-02-24T17:10:20,238   Created wheel for napari-bacseg: filename=napari_bacseg-1.0.0-py3-none-any.whl size=239590 sha256=4372a3b7570dbfa2640afaf4582ef6a24ebe7a94f3e01d57c87d7b0d1f3058e8
2023-02-24T17:10:20,239   Stored in directory: /tmp/pip-ephem-wheel-cache-v8rmdgqk/wheels/1e/e8/3a/7f58b546454d079b1e8ff8fc6231c8c73dbe3ff90eb230de79
2023-02-24T17:10:20,254 Successfully built napari-bacseg
2023-02-24T17:10:20,267 Removed build tracker: '/tmp/pip-build-tracker-pi157umb'