2023-03-05T06:29:40,187 Created temporary directory: /tmp/pip-ephem-wheel-cache-c8i515_k
2023-03-05T06:29:40,193 Created temporary directory: /tmp/pip-build-tracker-6ssqljbb
2023-03-05T06:29:40,194 Initialized build tracking at /tmp/pip-build-tracker-6ssqljbb
2023-03-05T06:29:40,194 Created build tracker: /tmp/pip-build-tracker-6ssqljbb
2023-03-05T06:29:40,195 Entered build tracker: /tmp/pip-build-tracker-6ssqljbb
2023-03-05T06:29:40,196 Created temporary directory: /tmp/pip-wheel-5ojibuv8
2023-03-05T06:29:40,206 DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-03-05T06:29:40,212 Created temporary directory: /tmp/pip-ephem-wheel-cache-dtietc8p
2023-03-05T06:29:40,272 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-03-05T06:29:40,279 2 location(s) to search for versions of phased-methylation:
2023-03-05T06:29:40,279 * https://pypi.org/simple/phased-methylation/
2023-03-05T06:29:40,279 * https://www.piwheels.org/simple/phased-methylation/
2023-03-05T06:29:40,280 Fetching project page and analyzing links: https://pypi.org/simple/phased-methylation/
2023-03-05T06:29:40,281 Getting page https://pypi.org/simple/phased-methylation/
2023-03-05T06:29:40,285 Found index url https://pypi.org/simple
2023-03-05T06:29:40,470 Fetched page https://pypi.org/simple/phased-methylation/ as application/vnd.pypi.simple.v1+json
2023-03-05T06:29:40,477   Skipping link: No binaries permitted for phased-methylation: https://files.pythonhosted.org/packages/ab/35/5da5df4f58cc8019ed6d3a53a8fbfcd22b6e55defbe04496766abcf021d7/phased_methylation-0.17.3-py3-none-any.whl (from https://pypi.org/simple/phased-methylation/)
2023-03-05T06:29:40,477   Found link https://files.pythonhosted.org/packages/89/a1/6587c50d7fe4a45e8cf30550c2fb41d6143e35205969e914d61cfee30646/phased_methylation-0.17.3.tar.gz (from https://pypi.org/simple/phased-methylation/), version: 0.17.3
2023-03-05T06:29:40,478   Skipping link: No binaries permitted for phased-methylation: https://files.pythonhosted.org/packages/91/3b/f48111f432f65b0865c3249cb122953f28b17b400f0053220c474f2cd474/phased_methylation-0.17.4-py3-none-any.whl (from https://pypi.org/simple/phased-methylation/)
2023-03-05T06:29:40,479   Found link https://files.pythonhosted.org/packages/79/32/dcad393dd03ff51d9ef0b102d8a832c9e77b12d6e5400d669300c7da7be4/phased_methylation-0.17.4.tar.gz (from https://pypi.org/simple/phased-methylation/), version: 0.17.4
2023-03-05T06:29:40,479   Skipping link: No binaries permitted for phased-methylation: https://files.pythonhosted.org/packages/23/72/53386dba0b7aea73a7db5bc23c6cf29c79c018be209eaf12e749df423c32/phased_methylation-0.17.5-py3-none-any.whl (from https://pypi.org/simple/phased-methylation/)
2023-03-05T06:29:40,480   Found link https://files.pythonhosted.org/packages/7c/e8/b67e7c347e7680ac472a5c5658a8c4aba10e69e5f78dee17cf2bbead4074/phased_methylation-0.17.5.tar.gz (from https://pypi.org/simple/phased-methylation/), version: 0.17.5
2023-03-05T06:29:40,482   Found link https://files.pythonhosted.org/packages/4e/ad/7c7292f34d78be9d1e89ee900568fa9c53d157a8a89f941aa32c2a2e958a/phased-methylation-0.17.6.tar.gz (from https://pypi.org/simple/phased-methylation/) (requires-python:>=3.7), version: 0.17.6
2023-03-05T06:29:40,482   Skipping link: No binaries permitted for phased-methylation: https://files.pythonhosted.org/packages/74/50/c565d0cb81bca75c13fd2f96c97ee4f9f06bc88616bb0b4df5741b041753/phased_methylation-0.17.6-py3-none-any.whl (from https://pypi.org/simple/phased-methylation/) (requires-python:>=3.7)
2023-03-05T06:29:40,484   Found link https://files.pythonhosted.org/packages/81/74/3373efbd3746bd729c217bc52237c02024d1bff2b675393c0ae0b581e758/phased-methylation-0.17.7.tar.gz (from https://pypi.org/simple/phased-methylation/) (requires-python:>=3.7), version: 0.17.7
2023-03-05T06:29:40,484   Skipping link: No binaries permitted for phased-methylation: https://files.pythonhosted.org/packages/22/21/c7673d9769786a71f84bba16ff73fa114a53b4d4ec55644e571ba9f0a154/phased_methylation-0.17.7-py3-none-any.whl (from https://pypi.org/simple/phased-methylation/) (requires-python:>=3.7)
2023-03-05T06:29:40,485 Fetching project page and analyzing links: https://www.piwheels.org/simple/phased-methylation/
2023-03-05T06:29:40,486 Getting page https://www.piwheels.org/simple/phased-methylation/
2023-03-05T06:29:40,488 Found index url https://www.piwheels.org/simple
2023-03-05T06:29:40,718 Fetched page https://www.piwheels.org/simple/phased-methylation/ as text/html
2023-03-05T06:29:40,726   Skipping link: No binaries permitted for phased-methylation: https://www.piwheels.org/simple/phased-methylation/phased_methylation-0.17.5-py3-none-any.whl#sha256=62294a8cc084227b2c3d6a085a55c1ee3872a928f9bd122bb4230c778e9d9930 (from https://www.piwheels.org/simple/phased-methylation/)
2023-03-05T06:29:40,727   Skipping link: No binaries permitted for phased-methylation: https://www.piwheels.org/simple/phased-methylation/phased_methylation-0.17.4-py3-none-any.whl#sha256=45c6cd38cfdf15dfedcc20bdf51b94f6db6c8665ef202f4545cac255284aa384 (from https://www.piwheels.org/simple/phased-methylation/)
2023-03-05T06:29:40,727   Skipping link: No binaries permitted for phased-methylation: https://www.piwheels.org/simple/phased-methylation/phased_methylation-0.17.3-py3-none-any.whl#sha256=08f4e12d17be7773ff46992e456682f95a1cfdee2c4501fdc50c73a9ed00b76a (from https://www.piwheels.org/simple/phased-methylation/)
2023-03-05T06:29:40,728 Skipping link: not a file: https://www.piwheels.org/simple/phased-methylation/
2023-03-05T06:29:40,729 Skipping link: not a file: https://pypi.org/simple/phased-methylation/
2023-03-05T06:29:40,763 Given no hashes to check 1 links for project 'phased-methylation': discarding no candidates
2023-03-05T06:29:40,792 Collecting phased-methylation==0.17.6
2023-03-05T06:29:40,797   Created temporary directory: /tmp/pip-unpack-40wk9eja
2023-03-05T06:29:41,035   Downloading phased-methylation-0.17.6.tar.gz (19.0 MB)
2023-03-05T06:29:51,620   Added phased-methylation==0.17.6 from https://files.pythonhosted.org/packages/4e/ad/7c7292f34d78be9d1e89ee900568fa9c53d157a8a89f941aa32c2a2e958a/phased-methylation-0.17.6.tar.gz to build tracker '/tmp/pip-build-tracker-6ssqljbb'
2023-03-05T06:29:51,628   Created temporary directory: /tmp/pip-build-env-j4slfwnh
2023-03-05T06:29:51,648   Installing build dependencies: started
2023-03-05T06:29:51,650   Running command pip subprocess to install build dependencies
2023-03-05T06:29:54,471   Using pip 23.0.1 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7)
2023-03-05T06:29:55,664   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-03-05T06:29:55,722   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-03-05T06:29:59,657   Collecting setuptools
2023-03-05T06:29:59,898     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.4.0-py3-none-any.whl (1.1 MB)
2023-03-05T06:30:04,654   Installing collected packages: setuptools
2023-03-05T06:30:09,108   Successfully installed setuptools-67.4.0
2023-03-05T06:30:10,031   Installing build dependencies: finished with status 'done'
2023-03-05T06:30:10,042   Getting requirements to build wheel: started
2023-03-05T06:30:10,044   Running command Getting requirements to build wheel
2023-03-05T06:30:11,991   running egg_info
2023-03-05T06:30:12,003   writing phased_methylation.egg-info/PKG-INFO
2023-03-05T06:30:12,008   writing dependency_links to phased_methylation.egg-info/dependency_links.txt
2023-03-05T06:30:12,013   writing entry points to phased_methylation.egg-info/entry_points.txt
2023-03-05T06:30:12,016   writing requirements to phased_methylation.egg-info/requires.txt
2023-03-05T06:30:12,018   writing top-level names to phased_methylation.egg-info/top_level.txt
2023-03-05T06:30:12,060   reading manifest file 'phased_methylation.egg-info/SOURCES.txt'
2023-03-05T06:30:12,074   reading manifest template 'MANIFEST.in'
2023-03-05T06:30:12,092   adding license file 'LICENSE'
2023-03-05T06:30:12,123   writing manifest file 'phased_methylation.egg-info/SOURCES.txt'
2023-03-05T06:30:12,128   /tmp/pip-build-env-j4slfwnh/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:108: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-03-05T06:30:12,129     warnings.warn(msg, _BetaConfiguration)
2023-03-05T06:30:12,295   Getting requirements to build wheel: finished with status 'done'
2023-03-05T06:30:12,321   Installing backend dependencies: started
2023-03-05T06:30:12,323   Running command pip subprocess to install backend dependencies
2023-03-05T06:30:15,049   Using pip 23.0.1 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7)
2023-03-05T06:30:16,246   DEPRECATION: --no-binary currently disables reading from the cache of locally built wheels. In the future --no-binary will not influence the wheel cache. pip 23.1 will enforce this behaviour change. A possible replacement is to use the --no-cache-dir option. You can use the flag --use-feature=no-binary-enable-wheel-cache to test the upcoming behaviour. Discussion can be found at https://github.com/pypa/pip/issues/11453
2023-03-05T06:30:16,305   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-03-05T06:30:17,206   Collecting wheel
2023-03-05T06:30:17,250     Using cached https://www.piwheels.org/simple/wheel/wheel-0.38.4-py3-none-any.whl (36 kB)
2023-03-05T06:30:21,118   Installing collected packages: wheel
2023-03-05T06:30:21,403     Creating /tmp/pip-build-env-j4slfwnh/normal/bin
2023-03-05T06:30:21,408     changing mode of /tmp/pip-build-env-j4slfwnh/normal/bin/wheel to 755
2023-03-05T06:30:21,434   Successfully installed wheel-0.38.4
2023-03-05T06:30:22,286   Installing backend dependencies: finished with status 'done'
2023-03-05T06:30:22,292   Created temporary directory: /tmp/pip-modern-metadata-_yroe6q_
2023-03-05T06:30:22,298   Preparing metadata (pyproject.toml): started
2023-03-05T06:30:22,300   Running command Preparing metadata (pyproject.toml)
2023-03-05T06:30:24,162   running dist_info
2023-03-05T06:30:24,174   creating /tmp/pip-modern-metadata-_yroe6q_/phased_methylation.egg-info
2023-03-05T06:30:24,184   writing /tmp/pip-modern-metadata-_yroe6q_/phased_methylation.egg-info/PKG-INFO
2023-03-05T06:30:24,188   writing dependency_links to /tmp/pip-modern-metadata-_yroe6q_/phased_methylation.egg-info/dependency_links.txt
2023-03-05T06:30:24,193   writing entry points to /tmp/pip-modern-metadata-_yroe6q_/phased_methylation.egg-info/entry_points.txt
2023-03-05T06:30:24,196   writing requirements to /tmp/pip-modern-metadata-_yroe6q_/phased_methylation.egg-info/requires.txt
2023-03-05T06:30:24,198   writing top-level names to /tmp/pip-modern-metadata-_yroe6q_/phased_methylation.egg-info/top_level.txt
2023-03-05T06:30:24,201   writing manifest file '/tmp/pip-modern-metadata-_yroe6q_/phased_methylation.egg-info/SOURCES.txt'
2023-03-05T06:30:24,248   reading manifest file '/tmp/pip-modern-metadata-_yroe6q_/phased_methylation.egg-info/SOURCES.txt'
2023-03-05T06:30:24,253   reading manifest template 'MANIFEST.in'
2023-03-05T06:30:24,304   adding license file 'LICENSE'
2023-03-05T06:30:24,326   writing manifest file '/tmp/pip-modern-metadata-_yroe6q_/phased_methylation.egg-info/SOURCES.txt'
2023-03-05T06:30:24,329   creating '/tmp/pip-modern-metadata-_yroe6q_/phased_methylation-0.17.6.dist-info'
2023-03-05T06:30:24,406   /tmp/pip-build-env-j4slfwnh/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:108: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-03-05T06:30:24,407     warnings.warn(msg, _BetaConfiguration)
2023-03-05T06:30:24,579   Preparing metadata (pyproject.toml): finished with status 'done'
2023-03-05T06:30:24,595   Source in /tmp/pip-wheel-5ojibuv8/phased-methylation_9b4fc9cb9045428884087f2f93006014 has version 0.17.6, which satisfies requirement phased-methylation==0.17.6 from https://files.pythonhosted.org/packages/4e/ad/7c7292f34d78be9d1e89ee900568fa9c53d157a8a89f941aa32c2a2e958a/phased-methylation-0.17.6.tar.gz
2023-03-05T06:30:24,597   Removed phased-methylation==0.17.6 from https://files.pythonhosted.org/packages/4e/ad/7c7292f34d78be9d1e89ee900568fa9c53d157a8a89f941aa32c2a2e958a/phased-methylation-0.17.6.tar.gz from build tracker '/tmp/pip-build-tracker-6ssqljbb'
2023-03-05T06:30:24,611 Created temporary directory: /tmp/pip-unpack-h5w4jo91
2023-03-05T06:30:24,612 Building wheels for collected packages: phased-methylation
2023-03-05T06:30:24,621   Created temporary directory: /tmp/pip-wheel-1l29o7r9
2023-03-05T06:30:24,622   Destination directory: /tmp/pip-wheel-1l29o7r9
2023-03-05T06:30:24,627   Building wheel for phased-methylation (pyproject.toml): started
2023-03-05T06:30:24,629   Running command Building wheel for phased-methylation (pyproject.toml)
2023-03-05T06:30:26,397   running bdist_wheel
2023-03-05T06:30:26,429   running build
2023-03-05T06:30:26,429   running build_py
2023-03-05T06:30:26,443   creating build
2023-03-05T06:30:26,443   creating build/lib
2023-03-05T06:30:26,445   creating build/lib/phased_methylation
2023-03-05T06:30:26,447   copying src/phased_methylation/promoter_methylation.py -> build/lib/phased_methylation
2023-03-05T06:30:26,451   copying src/phased_methylation/map.py -> build/lib/phased_methylation
2023-03-05T06:30:26,455   copying src/phased_methylation/methylation_kde.py -> build/lib/phased_methylation
2023-03-05T06:30:26,459   copying src/phased_methylation/check_gpu_availability.py -> build/lib/phased_methylation
2023-03-05T06:30:26,462   copying src/phased_methylation/env.py -> build/lib/phased_methylation
2023-03-05T06:30:26,465   copying src/phased_methylation/gene_body_methylation.py -> build/lib/phased_methylation
2023-03-05T06:30:26,469   copying src/phased_methylation/run.py -> build/lib/phased_methylation
2023-03-05T06:30:26,473   copying src/phased_methylation/export_bedgraph.py -> build/lib/phased_methylation
2023-03-05T06:30:26,476   copying src/phased_methylation/export_metilene.py -> build/lib/phased_methylation
2023-03-05T06:30:26,480   copying src/phased_methylation/plot_repeats.py -> build/lib/phased_methylation
2023-03-05T06:30:26,484   copying src/phased_methylation/split_methyl_bed.py -> build/lib/phased_methylation
2023-03-05T06:30:26,487   copying src/phased_methylation/__init__.py -> build/lib/phased_methylation
2023-03-05T06:30:26,491   copying src/phased_methylation/phased_methylation.py -> build/lib/phased_methylation
2023-03-05T06:30:26,496   copying src/phased_methylation/parse_gff.py -> build/lib/phased_methylation
2023-03-05T06:30:26,499   copying src/phased_methylation/phase.py -> build/lib/phased_methylation
2023-03-05T06:30:26,503   copying src/phased_methylation/plot_genes.py -> build/lib/phased_methylation
2023-03-05T06:30:26,506   copying src/phased_methylation/plot_bedtools.py -> build/lib/phased_methylation
2023-03-05T06:30:26,510   copying src/phased_methylation/tabulate.py -> build/lib/phased_methylation
2023-03-05T06:30:26,513   copying src/phased_methylation/intersect.py -> build/lib/phased_methylation
2023-03-05T06:30:26,517   copying src/phased_methylation/plot.py -> build/lib/phased_methylation
2023-03-05T06:30:26,521   copying src/phased_methylation/call.py -> build/lib/phased_methylation
2023-03-05T06:30:26,525   copying src/phased_methylation/merge.py -> build/lib/phased_methylation
2023-03-05T06:30:26,529   copying src/phased_methylation/mean.py -> build/lib/phased_methylation
2023-03-05T06:30:26,538   running egg_info
2023-03-05T06:30:26,556   writing phased_methylation.egg-info/PKG-INFO
2023-03-05T06:30:26,560   writing dependency_links to phased_methylation.egg-info/dependency_links.txt
2023-03-05T06:30:26,564   writing entry points to phased_methylation.egg-info/entry_points.txt
2023-03-05T06:30:26,567   writing requirements to phased_methylation.egg-info/requires.txt
2023-03-05T06:30:26,569   writing top-level names to phased_methylation.egg-info/top_level.txt
2023-03-05T06:30:26,594   reading manifest file 'phased_methylation.egg-info/SOURCES.txt'
2023-03-05T06:30:26,607   reading manifest template 'MANIFEST.in'
2023-03-05T06:30:26,625   adding license file 'LICENSE'
2023-03-05T06:30:26,655   writing manifest file 'phased_methylation.egg-info/SOURCES.txt'
2023-03-05T06:30:26,692   creating build/lib/phased_methylation/minimap2_example_data
2023-03-05T06:30:26,694   copying src/phased_methylation/minimap2_example_data/MT-human.fa -> build/lib/phased_methylation/minimap2_example_data
2023-03-05T06:30:26,699   copying src/phased_methylation/minimap2_example_data/MT-orang.fa -> build/lib/phased_methylation/minimap2_example_data
2023-03-05T06:30:26,705   copying src/phased_methylation/minimap2_example_data/test.bam -> build/lib/phased_methylation/minimap2_example_data
2023-03-05T06:30:26,710   copying src/phased_methylation/minimap2_example_data/test.bam.bai -> build/lib/phased_methylation/minimap2_example_data
2023-03-05T06:30:26,714   creating build/lib/phased_methylation/longshot_example_data
2023-03-05T06:30:26,715   copying src/phased_methylation/longshot_example_data/genome.fa -> build/lib/phased_methylation/longshot_example_data
2023-03-05T06:30:26,751   copying src/phased_methylation/longshot_example_data/genome.fa.fai -> build/lib/phased_methylation/longshot_example_data
2023-03-05T06:30:26,755   copying src/phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz -> build/lib/phased_methylation/longshot_example_data
2023-03-05T06:30:26,759   copying src/phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz.tbi -> build/lib/phased_methylation/longshot_example_data
2023-03-05T06:30:26,763   copying src/phased_methylation/longshot_example_data/out.vcf.gz -> build/lib/phased_methylation/longshot_example_data
2023-03-05T06:30:26,770   copying src/phased_methylation/longshot_example_data/out.vcf.gz.tbi -> build/lib/phased_methylation/longshot_example_data
2023-03-05T06:30:26,774   copying src/phased_methylation/longshot_example_data/pacbio_reads_30x.bam -> build/lib/phased_methylation/longshot_example_data
2023-03-05T06:30:27,221   copying src/phased_methylation/longshot_example_data/pacbio_reads_30x.bam.bai -> build/lib/phased_methylation/longshot_example_data
2023-03-05T06:30:27,226   creating build/lib/phased_methylation/ecoli_example_data
2023-03-05T06:30:27,228   copying src/phased_methylation/ecoli_example_data/draft.fa -> build/lib/phased_methylation/ecoli_example_data
2023-03-05T06:30:27,476   copying src/phased_methylation/ecoli_example_data/reads.fasta -> build/lib/phased_methylation/ecoli_example_data
2023-03-05T06:30:27,514   creating build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,516   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch107_read4268_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,528   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch109_read2202_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,542   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read2109_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,551   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read5041_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,565   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch118_read886_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,575   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read2477_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,584   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read955_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,592   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch139_read6216_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,604   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch144_read1044_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,615   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch158_read5484_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,623   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch170_read4483_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,630   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch174_read3654_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,638   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch177_read1452_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,646   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch179_read1009_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,658   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch196_read2318_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,668   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch200_read6055_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,677   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch21_read1037_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,686   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch24_read2302_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,696   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch250_read878_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,704   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read2154_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,715   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read913_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,729   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch281_read4019_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,738   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read1687_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,745   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read2189_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,752   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch28_read503_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,761   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read1002_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,771   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read2497_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,778   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch292_read1173_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,784   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch294_read1069_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,793   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read1093_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,805   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read6122_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,815   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch309_read4050_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,822   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read4806_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,833   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read5270_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,840   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch326_read4256_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,848   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch342_read2347_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,858   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch350_read270_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,865   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch353_read1369_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,873   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch355_read2033_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,884   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read1047_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,891   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read4057_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,898   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4280_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,908   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4310_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,916   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4497_strand1.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,925   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read5665_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,938   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read929_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,944   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch381_read3165_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,951   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch383_read6112_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,960   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read2287_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,969   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read3493_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,979   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch403_read4689_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,986   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch407_read2873_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:27,997   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch40_read4532_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,004   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch418_read2596_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,013   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch41_read2892_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,024   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch420_read357_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,037   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch427_read1086_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,047   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch432_read393_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,056   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch433_read1144_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,065   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1483_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,075   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1894_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,083   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read2386_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,090   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read3275_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,097   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read394_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,103   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read1231_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,110   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read5435_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,118   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch44_read3066_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,124   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2786_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,133   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2860_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,142   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch467_read81_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,150   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch471_read263_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,159   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch477_read112_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,168   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read328_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,177   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read924_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,183   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1028_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,190   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1935_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,199   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read715_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,210   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch482_read758_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,219   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read1308_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,228   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read811_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,237   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch485_read77_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,243   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch486_read3631_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,249   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch490_read814_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,255   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch491_read3080_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,265   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read2488_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,273   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read5399_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,280   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch497_read3630_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,288   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch501_read29_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,296   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read1993_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,305   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read3234_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,314   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch506_read899_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,322   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3215_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,329   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3907_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,341   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read1147_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,353   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3088_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,363   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3412_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,373   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read1905_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,382   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read6087_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,391   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch66_read4851_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,399   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch69_read998_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,408   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch7_read2760_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,419   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch80_read1993_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,427   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read4752_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,439   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read564_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,448   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read2098_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,455   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read498_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,465   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch8_read1768_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,472   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch91_read2127_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,479   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read114_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,488   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read4662_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,497   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2298_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,505   copying src/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2551_strand.fast5 -> build/lib/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:28,543   installing to build/bdist.linux-armv7l/wheel
2023-03-05T06:30:28,543   running install
2023-03-05T06:30:28,603   running install_lib
2023-03-05T06:30:28,613   creating build/bdist.linux-armv7l
2023-03-05T06:30:28,614   creating build/bdist.linux-armv7l/wheel
2023-03-05T06:30:28,619   creating build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,621   copying build/lib/phased_methylation/promoter_methylation.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,625   copying build/lib/phased_methylation/map.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,629   copying build/lib/phased_methylation/methylation_kde.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,632   copying build/lib/phased_methylation/check_gpu_availability.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,636   copying build/lib/phased_methylation/env.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,640   copying build/lib/phased_methylation/gene_body_methylation.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,645   creating build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2023-03-05T06:30:28,647   copying build/lib/phased_methylation/minimap2_example_data/test.bam -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2023-03-05T06:30:28,651   copying build/lib/phased_methylation/minimap2_example_data/MT-human.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2023-03-05T06:30:28,656   copying build/lib/phased_methylation/minimap2_example_data/MT-orang.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2023-03-05T06:30:28,662   copying build/lib/phased_methylation/minimap2_example_data/test.bam.bai -> build/bdist.linux-armv7l/wheel/phased_methylation/minimap2_example_data
2023-03-05T06:30:28,665   copying build/lib/phased_methylation/run.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,670   copying build/lib/phased_methylation/export_bedgraph.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,674   copying build/lib/phased_methylation/export_metilene.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,678   copying build/lib/phased_methylation/plot_repeats.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:28,683   creating build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2023-03-05T06:30:28,685   copying build/lib/phased_methylation/longshot_example_data/out.vcf.gz.tbi -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2023-03-05T06:30:28,689   copying build/lib/phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz.tbi -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2023-03-05T06:30:28,692   copying build/lib/phased_methylation/longshot_example_data/pacbio_reads_30x.bam -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2023-03-05T06:30:29,024   copying build/lib/phased_methylation/longshot_example_data/genome.fa.fai -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2023-03-05T06:30:29,028   copying build/lib/phased_methylation/longshot_example_data/genome.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2023-03-05T06:30:29,062   copying build/lib/phased_methylation/longshot_example_data/pacbio_reads_30x.bam.bai -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2023-03-05T06:30:29,066   copying build/lib/phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2023-03-05T06:30:29,070   copying build/lib/phased_methylation/longshot_example_data/out.vcf.gz -> build/bdist.linux-armv7l/wheel/phased_methylation/longshot_example_data
2023-03-05T06:30:29,076   copying build/lib/phased_methylation/split_methyl_bed.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,080   copying build/lib/phased_methylation/__init__.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,083   copying build/lib/phased_methylation/phased_methylation.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,089   copying build/lib/phased_methylation/parse_gff.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,092   copying build/lib/phased_methylation/phase.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,096   copying build/lib/phased_methylation/plot_genes.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,100   copying build/lib/phased_methylation/plot_bedtools.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,104   copying build/lib/phased_methylation/tabulate.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,108   copying build/lib/phased_methylation/intersect.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,112   copying build/lib/phased_methylation/plot.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,116   copying build/lib/phased_methylation/call.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,120   copying build/lib/phased_methylation/merge.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:29,125   creating build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data
2023-03-05T06:30:29,127   copying build/lib/phased_methylation/ecoli_example_data/reads.fasta -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data
2023-03-05T06:30:29,167   copying build/lib/phased_methylation/ecoli_example_data/draft.fa -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data
2023-03-05T06:30:29,413   creating build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,415   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch170_read4483_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,422   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch342_read2347_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,431   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch309_read4050_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,437   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read5665_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,447   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read1905_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,455   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch433_read1144_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,464   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read2098_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,471   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch80_read1993_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,478   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch482_read758_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,484   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read4806_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,494   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch24_read2302_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,504   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch281_read4019_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,514   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read2477_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,523   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch350_read270_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,531   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch353_read1369_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,539   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read929_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,545   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch7_read2760_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,560   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read6122_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,570   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1028_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,576   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch250_read878_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,583   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch179_read1009_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,595   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read114_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,604   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch491_read3080_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,614   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch501_read29_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,622   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read328_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,631   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read1147_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,643   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read913_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,655   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read1231_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,661   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read1993_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,669   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch118_read886_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,679   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read3275_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,685   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch40_read4532_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,692   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4280_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,703   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch158_read5484_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,711   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch485_read77_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,717   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read4752_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,730   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch28_read503_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,739   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch107_read4268_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,750   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read1002_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,761   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read5399_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,769   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch21_read1037_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,777   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2298_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,783   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch471_read263_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,792   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch420_read357_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,803   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch109_read2202_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,815   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read715_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,825   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch403_read4689_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,831   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch91_read2127_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,837   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read394_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,843   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch69_read998_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,851   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read6087_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,860   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch432_read393_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,870   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read2109_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,878   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch326_read4256_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,886   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch407_read2873_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,896   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch497_read3630_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,905   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3412_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,917   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch8_read1768_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,925   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch418_read2596_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,937   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read955_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,946   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2860_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,961   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1483_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,972   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read2488_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,981   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read924_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,988   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read2386_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:29,997   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1894_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,005   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch294_read1069_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,013   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch292_read1173_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,019   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read3493_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,029   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch41_read2892_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,038   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read564_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,046   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch383_read6112_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,054   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch355_read2033_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,064   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3088_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,074   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1935_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,083   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch66_read4851_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,090   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2786_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,098   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read1687_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,105   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read4057_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,111   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read5041_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,120   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch477_read112_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,129   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read2154_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,138   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch200_read6055_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,147   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read1093_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,156   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch506_read899_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,164   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch139_read6216_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,177   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read2497_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,184   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch486_read3631_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,191   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch467_read81_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,198   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch174_read3654_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,205   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3907_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,215   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2551_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,229   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch490_read814_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,236   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch381_read3165_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,244   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch196_read2318_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,254   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read4662_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,263   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read1308_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,272   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read2189_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,281   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read498_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,291   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3215_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,299   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read1047_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,346   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch427_read1086_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,357   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch177_read1452_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,364   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4497_strand1.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,373   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read5435_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,381   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read811_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,389   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read3234_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,400   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4310_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,407   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read2287_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,414   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch44_read3066_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,421   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read5270_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,427   copying build/lib/phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch144_read1044_strand.fast5 -> build/bdist.linux-armv7l/wheel/phased_methylation/ecoli_example_data/fast5_files
2023-03-05T06:30:30,435   copying build/lib/phased_methylation/mean.py -> build/bdist.linux-armv7l/wheel/phased_methylation
2023-03-05T06:30:30,438   running install_egg_info
2023-03-05T06:30:30,448   Copying phased_methylation.egg-info to build/bdist.linux-armv7l/wheel/phased_methylation-0.17.6-py3.7.egg-info
2023-03-05T06:30:30,471   running install_scripts
2023-03-05T06:30:30,509   creating build/bdist.linux-armv7l/wheel/phased_methylation-0.17.6.dist-info/WHEEL
2023-03-05T06:30:30,514   creating '/tmp/pip-wheel-1l29o7r9/.tmp-0fo5rolc/phased_methylation-0.17.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-03-05T06:30:30,519   adding 'phased_methylation/__init__.py'
2023-03-05T06:30:30,522   adding 'phased_methylation/call.py'
2023-03-05T06:30:30,525   adding 'phased_methylation/check_gpu_availability.py'
2023-03-05T06:30:30,528   adding 'phased_methylation/env.py'
2023-03-05T06:30:30,531   adding 'phased_methylation/export_bedgraph.py'
2023-03-05T06:30:30,533   adding 'phased_methylation/export_metilene.py'
2023-03-05T06:30:30,536   adding 'phased_methylation/gene_body_methylation.py'
2023-03-05T06:30:30,539   adding 'phased_methylation/intersect.py'
2023-03-05T06:30:30,542   adding 'phased_methylation/map.py'
2023-03-05T06:30:30,545   adding 'phased_methylation/mean.py'
2023-03-05T06:30:30,548   adding 'phased_methylation/merge.py'
2023-03-05T06:30:30,550   adding 'phased_methylation/methylation_kde.py'
2023-03-05T06:30:30,553   adding 'phased_methylation/parse_gff.py'
2023-03-05T06:30:30,555   adding 'phased_methylation/phase.py'
2023-03-05T06:30:30,562   adding 'phased_methylation/phased_methylation.py'
2023-03-05T06:30:30,566   adding 'phased_methylation/plot.py'
2023-03-05T06:30:30,569   adding 'phased_methylation/plot_bedtools.py'
2023-03-05T06:30:30,572   adding 'phased_methylation/plot_genes.py'
2023-03-05T06:30:30,575   adding 'phased_methylation/plot_repeats.py'
2023-03-05T06:30:30,578   adding 'phased_methylation/promoter_methylation.py'
2023-03-05T06:30:30,582   adding 'phased_methylation/run.py'
2023-03-05T06:30:30,585   adding 'phased_methylation/split_methyl_bed.py'
2023-03-05T06:30:30,588   adding 'phased_methylation/tabulate.py'
2023-03-05T06:30:36,994   adding 'phased_methylation/ecoli_example_data/draft.fa'
2023-03-05T06:30:37,851   adding 'phased_methylation/ecoli_example_data/reads.fasta'
2023-03-05T06:30:37,897   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch107_read4268_strand.fast5'
2023-03-05T06:30:37,940   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch109_read2202_strand.fast5'
2023-03-05T06:30:37,961   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read2109_strand.fast5'
2023-03-05T06:30:37,985   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch111_read5041_strand.fast5'
2023-03-05T06:30:38,009   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch118_read886_strand.fast5'
2023-03-05T06:30:38,030   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read2477_strand.fast5'
2023-03-05T06:30:38,045   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch123_read955_strand.fast5'
2023-03-05T06:30:38,085   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch139_read6216_strand.fast5'
2023-03-05T06:30:38,110   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch144_read1044_strand.fast5'
2023-03-05T06:30:38,123   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch158_read5484_strand.fast5'
2023-03-05T06:30:38,137   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch170_read4483_strand.fast5'
2023-03-05T06:30:38,149   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch174_read3654_strand.fast5'
2023-03-05T06:30:38,162   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch177_read1452_strand.fast5'
2023-03-05T06:30:38,203   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch179_read1009_strand.fast5'
2023-03-05T06:30:38,226   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch196_read2318_strand.fast5'
2023-03-05T06:30:38,247   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch200_read6055_strand.fast5'
2023-03-05T06:30:38,264   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch21_read1037_strand.fast5'
2023-03-05T06:30:38,289   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch24_read2302_strand.fast5'
2023-03-05T06:30:38,307   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch250_read878_strand.fast5'
2023-03-05T06:30:38,334   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read2154_strand.fast5'
2023-03-05T06:30:38,375   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch280_read913_strand.fast5'
2023-03-05T06:30:38,407   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch281_read4019_strand.fast5'
2023-03-05T06:30:38,419   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read1687_strand.fast5'
2023-03-05T06:30:38,436   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch289_read2189_strand.fast5'
2023-03-05T06:30:38,458   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch28_read503_strand.fast5'
2023-03-05T06:30:38,486   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read1002_strand.fast5'
2023-03-05T06:30:38,498   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch290_read2497_strand.fast5'
2023-03-05T06:30:38,507   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch292_read1173_strand.fast5'
2023-03-05T06:30:38,529   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch294_read1069_strand.fast5'
2023-03-05T06:30:38,550   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read1093_strand.fast5'
2023-03-05T06:30:38,577   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch302_read6122_strand.fast5'
2023-03-05T06:30:38,591   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch309_read4050_strand.fast5'
2023-03-05T06:30:38,621   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read4806_strand.fast5'
2023-03-05T06:30:38,633   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch316_read5270_strand.fast5'
2023-03-05T06:30:38,653   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch326_read4256_strand.fast5'
2023-03-05T06:30:38,680   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch342_read2347_strand.fast5'
2023-03-05T06:30:38,699   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch350_read270_strand.fast5'
2023-03-05T06:30:38,719   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch353_read1369_strand.fast5'
2023-03-05T06:30:38,748   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch355_read2033_strand.fast5'
2023-03-05T06:30:38,764   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read1047_strand.fast5'
2023-03-05T06:30:38,774   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch361_read4057_strand.fast5'
2023-03-05T06:30:38,806   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4280_strand.fast5'
2023-03-05T06:30:38,826   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4310_strand.fast5'
2023-03-05T06:30:38,849   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read4497_strand1.fast5'
2023-03-05T06:30:38,881   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read5665_strand.fast5'
2023-03-05T06:30:38,890   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch378_read929_strand.fast5'
2023-03-05T06:30:38,901   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch381_read3165_strand.fast5'
2023-03-05T06:30:38,917   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch383_read6112_strand.fast5'
2023-03-05T06:30:38,934   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read2287_strand.fast5'
2023-03-05T06:30:38,964   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch391_read3493_strand.fast5'
2023-03-05T06:30:38,973   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch403_read4689_strand.fast5'
2023-03-05T06:30:39,008   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch407_read2873_strand.fast5'
2023-03-05T06:30:39,022   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch40_read4532_strand.fast5'
2023-03-05T06:30:39,045   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch418_read2596_strand.fast5'
2023-03-05T06:30:39,072   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch41_read2892_strand.fast5'
2023-03-05T06:30:39,114   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch420_read357_strand.fast5'
2023-03-05T06:30:39,145   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch427_read1086_strand.fast5'
2023-03-05T06:30:39,168   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch432_read393_strand.fast5'
2023-03-05T06:30:39,193   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch433_read1144_strand.fast5'
2023-03-05T06:30:39,224   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1483_strand.fast5'
2023-03-05T06:30:39,243   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read1894_strand.fast5'
2023-03-05T06:30:39,261   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read2386_strand.fast5'
2023-03-05T06:30:39,272   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read3275_strand.fast5'
2023-03-05T06:30:39,284   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch43_read394_strand.fast5'
2023-03-05T06:30:39,296   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read1231_strand.fast5'
2023-03-05T06:30:39,315   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch442_read5435_strand.fast5'
2023-03-05T06:30:39,325   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch44_read3066_strand.fast5'
2023-03-05T06:30:39,347   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2786_strand.fast5'
2023-03-05T06:30:39,377   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch460_read2860_strand.fast5'
2023-03-05T06:30:39,394   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch467_read81_strand.fast5'
2023-03-05T06:30:39,415   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch471_read263_strand.fast5'
2023-03-05T06:30:39,439   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch477_read112_strand.fast5'
2023-03-05T06:30:39,458   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read328_strand.fast5'
2023-03-05T06:30:39,472   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch47_read924_strand.fast5'
2023-03-05T06:30:39,481   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1028_strand.fast5'
2023-03-05T06:30:39,507   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read1935_strand.fast5'
2023-03-05T06:30:39,544   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch481_read715_strand.fast5'
2023-03-05T06:30:39,556   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch482_read758_strand.fast5'
2023-03-05T06:30:39,575   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read1308_strand.fast5'
2023-03-05T06:30:39,597   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch483_read811_strand.fast5'
2023-03-05T06:30:39,605   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch485_read77_strand.fast5'
2023-03-05T06:30:39,614   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch486_read3631_strand.fast5'
2023-03-05T06:30:39,623   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch490_read814_strand.fast5'
2023-03-05T06:30:39,650   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch491_read3080_strand.fast5'
2023-03-05T06:30:39,672   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read2488_strand.fast5'
2023-03-05T06:30:39,687   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch493_read5399_strand.fast5'
2023-03-05T06:30:39,701   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch497_read3630_strand.fast5'
2023-03-05T06:30:39,720   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch501_read29_strand.fast5'
2023-03-05T06:30:39,742   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read1993_strand.fast5'
2023-03-05T06:30:39,764   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch505_read3234_strand.fast5'
2023-03-05T06:30:39,778   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch506_read899_strand.fast5'
2023-03-05T06:30:39,793   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3215_strand.fast5'
2023-03-05T06:30:39,828   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch54_read3907_strand.fast5'
2023-03-05T06:30:39,867   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read1147_strand.fast5'
2023-03-05T06:30:39,893   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3088_strand.fast5'
2023-03-05T06:30:39,921   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch57_read3412_strand.fast5'
2023-03-05T06:30:39,943   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read1905_strand.fast5'
2023-03-05T06:30:39,964   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch64_read6087_strand.fast5'
2023-03-05T06:30:39,980   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch66_read4851_strand.fast5'
2023-03-05T06:30:39,999   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch69_read998_strand.fast5'
2023-03-05T06:30:40,026   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch7_read2760_strand.fast5'
2023-03-05T06:30:40,040   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch80_read1993_strand.fast5'
2023-03-05T06:30:40,078   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read4752_strand.fast5'
2023-03-05T06:30:40,105   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch84_read564_strand.fast5'
2023-03-05T06:30:40,122   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read2098_strand.fast5'
2023-03-05T06:30:40,151   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch85_read498_strand.fast5'
2023-03-05T06:30:40,162   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch8_read1768_strand.fast5'
2023-03-05T06:30:40,171   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch91_read2127_strand.fast5'
2023-03-05T06:30:40,193   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read114_strand.fast5'
2023-03-05T06:30:40,220   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch95_read4662_strand.fast5'
2023-03-05T06:30:40,233   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2298_strand.fast5'
2023-03-05T06:30:40,260   adding 'phased_methylation/ecoli_example_data/fast5_files/odw_genlab4209_20161213_FN_MN16303_sequencing_run_sample_id_32395_ch98_read2551_strand.fast5'
2023-03-05T06:30:41,090   adding 'phased_methylation/longshot_example_data/genome.fa'
2023-03-05T06:30:41,105   adding 'phased_methylation/longshot_example_data/genome.fa.fai'
2023-03-05T06:30:41,109   adding 'phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz'
2023-03-05T06:30:41,111   adding 'phased_methylation/longshot_example_data/ground_truth_variants.vcf.gz.tbi'
2023-03-05T06:30:41,121   adding 'phased_methylation/longshot_example_data/out.vcf.gz'
2023-03-05T06:30:41,124   adding 'phased_methylation/longshot_example_data/out.vcf.gz.tbi'
2023-03-05T06:30:44,024   adding 'phased_methylation/longshot_example_data/pacbio_reads_30x.bam'
2023-03-05T06:30:44,225   adding 'phased_methylation/longshot_example_data/pacbio_reads_30x.bam.bai'
2023-03-05T06:30:44,246   adding 'phased_methylation/minimap2_example_data/MT-human.fa'
2023-03-05T06:30:44,266   adding 'phased_methylation/minimap2_example_data/MT-orang.fa'
2023-03-05T06:30:44,269   adding 'phased_methylation/minimap2_example_data/test.bam'
2023-03-05T06:30:44,272   adding 'phased_methylation/minimap2_example_data/test.bam.bai'
2023-03-05T06:30:44,277   adding 'phased_methylation-0.17.6.dist-info/LICENSE'
2023-03-05T06:30:44,280   adding 'phased_methylation-0.17.6.dist-info/METADATA'
2023-03-05T06:30:44,282   adding 'phased_methylation-0.17.6.dist-info/WHEEL'
2023-03-05T06:30:44,284   adding 'phased_methylation-0.17.6.dist-info/entry_points.txt'
2023-03-05T06:30:44,286   adding 'phased_methylation-0.17.6.dist-info/top_level.txt'
2023-03-05T06:30:44,294   adding 'phased_methylation-0.17.6.dist-info/RECORD'
2023-03-05T06:30:45,005   removing build/bdist.linux-armv7l/wheel
2023-03-05T06:30:45,103   /tmp/pip-build-env-j4slfwnh/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:108: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2023-03-05T06:30:45,104     warnings.warn(msg, _BetaConfiguration)
2023-03-05T06:30:45,289   Building wheel for phased-methylation (pyproject.toml): finished with status 'done'
2023-03-05T06:30:46,407   Created wheel for phased-methylation: filename=phased_methylation-0.17.6-py3-none-any.whl size=19114209 sha256=d20b094bedcfb1f9e36e67bea3c0b3b7c8e339867731fa06f47875d7fc2f7fa0
2023-03-05T06:30:46,409   Stored in directory: /tmp/pip-ephem-wheel-cache-dtietc8p/wheels/97/92/2b/ff9e0f7a42bf29cddb17038627c845f132ede64f3641d25a46
2023-03-05T06:30:46,474 Successfully built phased-methylation
2023-03-05T06:30:47,916 Removed build tracker: '/tmp/pip-build-tracker-6ssqljbb'