2023-05-21T14:45:42,572 Created temporary directory: /tmp/pip-build-tracker-n_0btvxi 2023-05-21T14:45:42,575 Initialized build tracking at /tmp/pip-build-tracker-n_0btvxi 2023-05-21T14:45:42,575 Created build tracker: /tmp/pip-build-tracker-n_0btvxi 2023-05-21T14:45:42,575 Entered build tracker: /tmp/pip-build-tracker-n_0btvxi 2023-05-21T14:45:42,576 Created temporary directory: /tmp/pip-wheel-m6u5yi3f 2023-05-21T14:45:42,585 Created temporary directory: /tmp/pip-ephem-wheel-cache-zhfn9jhw 2023-05-21T14:45:42,638 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-21T14:45:42,646 2 location(s) to search for versions of gb2seq: 2023-05-21T14:45:42,646 * https://pypi.org/simple/gb2seq/ 2023-05-21T14:45:42,646 * https://www.piwheels.org/simple/gb2seq/ 2023-05-21T14:45:42,647 Fetching project page and analyzing links: https://pypi.org/simple/gb2seq/ 2023-05-21T14:45:42,648 Getting page https://pypi.org/simple/gb2seq/ 2023-05-21T14:45:42,652 Found index url https://pypi.org/simple/ 2023-05-21T14:45:42,759 Fetched page https://pypi.org/simple/gb2seq/ as application/vnd.pypi.simple.v1+json 2023-05-21T14:45:42,765 Found link https://files.pythonhosted.org/packages/af/00/8ed22bb0ccd6cc5db4ef127813216547b6bc1e7d0ff89e1ea8b6fb0951a1/gb2seq-0.2.0.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.0 2023-05-21T14:45:42,766 Found link https://files.pythonhosted.org/packages/0c/91/0ece14ef7fdce1ca59bcf98ebd336b4336e47e0235639e16cc74706de645/gb2seq-0.2.1.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.1 2023-05-21T14:45:42,767 Found link https://files.pythonhosted.org/packages/a1/6c/4811dc15fbbf3029deb0e1f4e789c5ccd6e82ef64e6456280cfa1e7b5500/gb2seq-0.2.2.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.2 2023-05-21T14:45:42,768 Found link https://files.pythonhosted.org/packages/c6/40/293f9e79b376f355e63034a45f37799fbdeae47b8f4e61d8734dfa6478f3/gb2seq-0.2.3.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.3 2023-05-21T14:45:42,768 Found link https://files.pythonhosted.org/packages/63/93/cd71b29d455df9373a2970c83e812829bbb3047f9f1f7be17cd8392e83e2/gb2seq-0.2.4.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.4 2023-05-21T14:45:42,769 Found link https://files.pythonhosted.org/packages/ae/e1/74990aa8275bd0b902ca68c955ad0948b5cec820dc08d18714e6ccf3b617/gb2seq-0.2.5.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.5 2023-05-21T14:45:42,770 Found link https://files.pythonhosted.org/packages/fc/63/32e3a10b3b022404edff36b4ebb6a46e93d1e2b9014a2a94938da9fb0111/gb2seq-0.2.6.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.6 2023-05-21T14:45:42,770 Found link https://files.pythonhosted.org/packages/06/22/99e49bd674aff1241f15a7bee8018f4995aa4c69641fdd8db8f6813c127c/gb2seq-0.2.7.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.7 2023-05-21T14:45:42,771 Found link https://files.pythonhosted.org/packages/83/43/34726e200ee167af1a320f6085407c98b8017eddfeee127f9547be240770/gb2seq-0.2.8.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.8 2023-05-21T14:45:42,772 Found link https://files.pythonhosted.org/packages/32/82/5313ebd295f1143f0e053b2d2fbf8cedbe053a6aea99bdf5024020369dab/gb2seq-0.2.9.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.9 2023-05-21T14:45:42,773 Fetching project page and analyzing links: https://www.piwheels.org/simple/gb2seq/ 2023-05-21T14:45:42,773 Getting page https://www.piwheels.org/simple/gb2seq/ 2023-05-21T14:45:42,776 Found index url https://www.piwheels.org/simple/ 2023-05-21T14:45:43,008 Fetched page https://www.piwheels.org/simple/gb2seq/ as text/html 2023-05-21T14:45:43,014 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.7-py3-none-any.whl#sha256=cd99209a60507ef01add9e58b0767a0431b4eb7486702d67a24421ea439a86b7 (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:45:43,015 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.5-py3-none-any.whl#sha256=ba29859097ef0c4c03f69e5779955dea2f604d4a4e137117b965976058ed4420 (from https://www.piwheels.org/simple/gb2seq/) (requires-python:>=3.7,<4.0) 2023-05-21T14:45:43,016 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.4-py3-none-any.whl#sha256=493b0d4f3a02acbdd938d7ad53c9ab146f53eb3af0420b1f0cae431cacef7150 (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:45:43,016 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.3-py3-none-any.whl#sha256=990a6513d22978222ab2478878acb0f5713639de08f1dcc4e2a4823289ade38e (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:45:43,017 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.2-py3-none-any.whl#sha256=634652cec9faba6521ea7d2378c41a4d0b83caae8972b63b844e81103b647ce2 (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:45:43,017 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.1-py3-none-any.whl#sha256=03ab29eb09f1f43020c86751aa1a31ff88132e478c0091cb0c78024be843d67f (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:45:43,017 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.0-py3-none-any.whl#sha256=bea2839bcf01cba97d0267c69da6fdc60537d2f4bcf0e776183240de252449fe (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:45:43,018 Skipping link: not a file: https://www.piwheels.org/simple/gb2seq/ 2023-05-21T14:45:43,019 Skipping link: not a file: https://pypi.org/simple/gb2seq/ 2023-05-21T14:45:43,055 Given no hashes to check 1 links for project 'gb2seq': discarding no candidates 2023-05-21T14:45:43,085 Collecting gb2seq==0.2.8 2023-05-21T14:45:43,090 Created temporary directory: /tmp/pip-unpack-cw_g3xmk 2023-05-21T14:45:43,267 Downloading gb2seq-0.2.8.tar.gz (63 kB) 2023-05-21T14:45:43,489 Added gb2seq==0.2.8 from https://files.pythonhosted.org/packages/83/43/34726e200ee167af1a320f6085407c98b8017eddfeee127f9547be240770/gb2seq-0.2.8.tar.gz to build tracker '/tmp/pip-build-tracker-n_0btvxi' 2023-05-21T14:45:43,494 Running setup.py (path:/tmp/pip-wheel-m6u5yi3f/gb2seq_9808f6bf213840c99c04703f01e98438/setup.py) egg_info for package gb2seq 2023-05-21T14:45:43,495 Created temporary directory: /tmp/pip-pip-egg-info-rg5it__n 2023-05-21T14:45:43,496 Preparing metadata (setup.py): started 2023-05-21T14:45:43,498 Running command python setup.py egg_info 2023-05-21T14:45:44,982 running egg_info 2023-05-21T14:45:44,984 creating /tmp/pip-pip-egg-info-rg5it__n/gb2seq.egg-info 2023-05-21T14:45:45,041 writing /tmp/pip-pip-egg-info-rg5it__n/gb2seq.egg-info/PKG-INFO 2023-05-21T14:45:45,046 writing dependency_links to /tmp/pip-pip-egg-info-rg5it__n/gb2seq.egg-info/dependency_links.txt 2023-05-21T14:45:45,050 writing requirements to /tmp/pip-pip-egg-info-rg5it__n/gb2seq.egg-info/requires.txt 2023-05-21T14:45:45,052 writing top-level names to /tmp/pip-pip-egg-info-rg5it__n/gb2seq.egg-info/top_level.txt 2023-05-21T14:45:45,055 writing manifest file '/tmp/pip-pip-egg-info-rg5it__n/gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:45:45,308 reading manifest file '/tmp/pip-pip-egg-info-rg5it__n/gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:45:45,312 reading manifest template 'MANIFEST.in' 2023-05-21T14:45:45,314 warning: no files found matching 'data/*.fasta' 2023-05-21T14:45:45,314 warning: no files found matching 'data/*.gb' 2023-05-21T14:45:45,315 adding license file 'AUTHORS' 2023-05-21T14:45:45,321 writing manifest file '/tmp/pip-pip-egg-info-rg5it__n/gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:45:45,442 Preparing metadata (setup.py): finished with status 'done' 2023-05-21T14:45:45,455 Source in /tmp/pip-wheel-m6u5yi3f/gb2seq_9808f6bf213840c99c04703f01e98438 has version 0.2.8, which satisfies requirement gb2seq==0.2.8 from https://files.pythonhosted.org/packages/83/43/34726e200ee167af1a320f6085407c98b8017eddfeee127f9547be240770/gb2seq-0.2.8.tar.gz 2023-05-21T14:45:45,457 Removed gb2seq==0.2.8 from https://files.pythonhosted.org/packages/83/43/34726e200ee167af1a320f6085407c98b8017eddfeee127f9547be240770/gb2seq-0.2.8.tar.gz from build tracker '/tmp/pip-build-tracker-n_0btvxi' 2023-05-21T14:45:45,467 Created temporary directory: /tmp/pip-unpack-p3crg_l0 2023-05-21T14:45:45,468 Building wheels for collected packages: gb2seq 2023-05-21T14:45:45,477 Created temporary directory: /tmp/pip-wheel-3d5ld09n 2023-05-21T14:45:45,478 Building wheel for gb2seq (setup.py): started 2023-05-21T14:45:45,480 Destination directory: /tmp/pip-wheel-3d5ld09n 2023-05-21T14:45:45,480 Running command python setup.py bdist_wheel 2023-05-21T14:45:47,426 running bdist_wheel 2023-05-21T14:45:47,603 running build 2023-05-21T14:45:47,603 running build_py 2023-05-21T14:45:47,668 creating build 2023-05-21T14:45:47,669 creating build/lib 2023-05-21T14:45:47,670 creating build/lib/gb2seq 2023-05-21T14:45:47,672 copying gb2seq/annotate.py -> build/lib/gb2seq 2023-05-21T14:45:47,677 copying gb2seq/checker.py -> build/lib/gb2seq 2023-05-21T14:45:47,680 copying gb2seq/translate.py -> build/lib/gb2seq 2023-05-21T14:45:47,685 copying gb2seq/genome.py -> build/lib/gb2seq 2023-05-21T14:45:47,688 copying gb2seq/change.py -> build/lib/gb2seq 2023-05-21T14:45:47,691 copying gb2seq/alignment.py -> build/lib/gb2seq 2023-05-21T14:45:47,697 copying gb2seq/sars2.py -> build/lib/gb2seq 2023-05-21T14:45:47,700 copying gb2seq/variants.py -> build/lib/gb2seq 2023-05-21T14:45:47,704 copying gb2seq/__init__.py -> build/lib/gb2seq 2023-05-21T14:45:47,707 copying gb2seq/features.py -> build/lib/gb2seq 2023-05-21T14:45:47,712 running egg_info 2023-05-21T14:45:47,847 writing gb2seq.egg-info/PKG-INFO 2023-05-21T14:45:47,850 writing dependency_links to gb2seq.egg-info/dependency_links.txt 2023-05-21T14:45:47,854 writing requirements to gb2seq.egg-info/requires.txt 2023-05-21T14:45:47,857 writing top-level names to gb2seq.egg-info/top_level.txt 2023-05-21T14:45:47,923 reading manifest file 'gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:45:47,928 reading manifest template 'MANIFEST.in' 2023-05-21T14:45:47,929 warning: no files found matching 'data/*.fasta' 2023-05-21T14:45:47,930 warning: no files found matching 'data/*.gb' 2023-05-21T14:45:47,930 adding license file 'AUTHORS' 2023-05-21T14:45:47,938 writing manifest file 'gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:45:47,944 running build_scripts 2023-05-21T14:45:47,946 creating build/scripts-3.7 2023-05-21T14:45:47,948 copying and adjusting bin/annotate-genome.py -> build/scripts-3.7 2023-05-21T14:45:47,951 copying and adjusting bin/describe-feature.py -> build/scripts-3.7 2023-05-21T14:45:47,955 copying and adjusting bin/describe-genome.py -> build/scripts-3.7 2023-05-21T14:45:47,961 copying and adjusting bin/describe-site.py -> build/scripts-3.7 2023-05-21T14:45:47,964 changing mode of build/scripts-3.7/annotate-genome.py from 644 to 755 2023-05-21T14:45:47,964 changing mode of build/scripts-3.7/describe-feature.py from 644 to 755 2023-05-21T14:45:47,965 changing mode of build/scripts-3.7/describe-genome.py from 644 to 755 2023-05-21T14:45:47,966 changing mode of build/scripts-3.7/describe-site.py from 644 to 755 2023-05-21T14:45:48,032 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-05-21T14:45:48,033 !! 2023-05-21T14:45:48,033 ******************************************************************************** 2023-05-21T14:45:48,034 Please avoid running ``setup.py`` directly. 2023-05-21T14:45:48,034 Instead, use pypa/build, pypa/installer, pypa/build or 2023-05-21T14:45:48,034 other standards-based tools. 2023-05-21T14:45:48,035 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-05-21T14:45:48,035 ******************************************************************************** 2023-05-21T14:45:48,036 !! 2023-05-21T14:45:48,036 self.initialize_options() 2023-05-21T14:45:48,092 installing to build/bdist.linux-armv7l/wheel 2023-05-21T14:45:48,093 running install 2023-05-21T14:45:48,153 running install_lib 2023-05-21T14:45:48,221 creating build/bdist.linux-armv7l 2023-05-21T14:45:48,221 creating build/bdist.linux-armv7l/wheel 2023-05-21T14:45:48,225 creating build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,227 copying build/lib/gb2seq/annotate.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,232 copying build/lib/gb2seq/checker.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,236 copying build/lib/gb2seq/translate.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,241 copying build/lib/gb2seq/genome.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,245 copying build/lib/gb2seq/change.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,249 copying build/lib/gb2seq/alignment.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,257 copying build/lib/gb2seq/sars2.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,261 copying build/lib/gb2seq/variants.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,265 copying build/lib/gb2seq/__init__.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,270 copying build/lib/gb2seq/features.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:45:48,276 running install_egg_info 2023-05-21T14:45:48,348 Copying gb2seq.egg-info to build/bdist.linux-armv7l/wheel/gb2seq-0.2.8-py3.7.egg-info 2023-05-21T14:45:48,369 running install_scripts 2023-05-21T14:45:48,372 creating build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data 2023-05-21T14:45:48,373 creating build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data/scripts 2023-05-21T14:45:48,376 copying build/scripts-3.7/annotate-genome.py -> build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data/scripts 2023-05-21T14:45:48,381 copying build/scripts-3.7/describe-feature.py -> build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data/scripts 2023-05-21T14:45:48,386 copying build/scripts-3.7/describe-site.py -> build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data/scripts 2023-05-21T14:45:48,390 copying build/scripts-3.7/describe-genome.py -> build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data/scripts 2023-05-21T14:45:48,395 changing mode of build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data/scripts/annotate-genome.py to 755 2023-05-21T14:45:48,396 changing mode of build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data/scripts/describe-feature.py to 755 2023-05-21T14:45:48,397 changing mode of build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data/scripts/describe-site.py to 755 2023-05-21T14:45:48,397 changing mode of build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.data/scripts/describe-genome.py to 755 2023-05-21T14:45:48,431 adding license file "AUTHORS" (matched pattern "AUTHORS*") 2023-05-21T14:45:48,438 creating build/bdist.linux-armv7l/wheel/gb2seq-0.2.8.dist-info/WHEEL 2023-05-21T14:45:48,443 creating '/tmp/pip-wheel-3d5ld09n/gb2seq-0.2.8-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-21T14:45:48,448 adding 'gb2seq/__init__.py' 2023-05-21T14:45:48,462 adding 'gb2seq/alignment.py' 2023-05-21T14:45:48,466 adding 'gb2seq/annotate.py' 2023-05-21T14:45:48,469 adding 'gb2seq/change.py' 2023-05-21T14:45:48,472 adding 'gb2seq/checker.py' 2023-05-21T14:45:48,479 adding 'gb2seq/features.py' 2023-05-21T14:45:48,483 adding 'gb2seq/genome.py' 2023-05-21T14:45:48,485 adding 'gb2seq/sars2.py' 2023-05-21T14:45:48,492 adding 'gb2seq/translate.py' 2023-05-21T14:45:48,495 adding 'gb2seq/variants.py' 2023-05-21T14:45:48,500 adding 'gb2seq-0.2.8.data/scripts/annotate-genome.py' 2023-05-21T14:45:48,504 adding 'gb2seq-0.2.8.data/scripts/describe-feature.py' 2023-05-21T14:45:48,509 adding 'gb2seq-0.2.8.data/scripts/describe-genome.py' 2023-05-21T14:45:48,513 adding 'gb2seq-0.2.8.data/scripts/describe-site.py' 2023-05-21T14:45:48,518 adding 'gb2seq-0.2.8.dist-info/AUTHORS' 2023-05-21T14:45:48,520 adding 'gb2seq-0.2.8.dist-info/METADATA' 2023-05-21T14:45:48,522 adding 'gb2seq-0.2.8.dist-info/WHEEL' 2023-05-21T14:45:48,524 adding 'gb2seq-0.2.8.dist-info/top_level.txt' 2023-05-21T14:45:48,525 adding 'gb2seq-0.2.8.dist-info/RECORD' 2023-05-21T14:45:48,530 removing build/bdist.linux-armv7l/wheel 2023-05-21T14:45:48,690 Building wheel for gb2seq (setup.py): finished with status 'done' 2023-05-21T14:45:48,699 Created wheel for gb2seq: filename=gb2seq-0.2.8-py3-none-any.whl size=41526 sha256=d36ccac027663d57fa013430a0c440615ef37361de3a97f75a8a92258629456f 2023-05-21T14:45:48,701 Stored in directory: /tmp/pip-ephem-wheel-cache-zhfn9jhw/wheels/5d/f4/b9/85d22eb2435414ac8f338202deb70a8ebe29ebf2388be028d7 2023-05-21T14:45:48,727 Successfully built gb2seq 2023-05-21T14:45:48,738 Removed build tracker: '/tmp/pip-build-tracker-n_0btvxi'