2023-05-21T14:57:07,381 Created temporary directory: /tmp/pip-build-tracker-yupeunb4 2023-05-21T14:57:07,383 Initialized build tracking at /tmp/pip-build-tracker-yupeunb4 2023-05-21T14:57:07,384 Created build tracker: /tmp/pip-build-tracker-yupeunb4 2023-05-21T14:57:07,384 Entered build tracker: /tmp/pip-build-tracker-yupeunb4 2023-05-21T14:57:07,385 Created temporary directory: /tmp/pip-wheel-ssanq7zs 2023-05-21T14:57:07,393 Created temporary directory: /tmp/pip-ephem-wheel-cache-_bng_9rv 2023-05-21T14:57:07,451 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-05-21T14:57:07,459 2 location(s) to search for versions of gb2seq: 2023-05-21T14:57:07,459 * https://pypi.org/simple/gb2seq/ 2023-05-21T14:57:07,459 * https://www.piwheels.org/simple/gb2seq/ 2023-05-21T14:57:07,460 Fetching project page and analyzing links: https://pypi.org/simple/gb2seq/ 2023-05-21T14:57:07,461 Getting page https://pypi.org/simple/gb2seq/ 2023-05-21T14:57:07,465 Found index url https://pypi.org/simple/ 2023-05-21T14:57:07,575 Fetched page https://pypi.org/simple/gb2seq/ as application/vnd.pypi.simple.v1+json 2023-05-21T14:57:07,582 Found link https://files.pythonhosted.org/packages/af/00/8ed22bb0ccd6cc5db4ef127813216547b6bc1e7d0ff89e1ea8b6fb0951a1/gb2seq-0.2.0.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.0 2023-05-21T14:57:07,583 Found link https://files.pythonhosted.org/packages/0c/91/0ece14ef7fdce1ca59bcf98ebd336b4336e47e0235639e16cc74706de645/gb2seq-0.2.1.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.1 2023-05-21T14:57:07,584 Found link https://files.pythonhosted.org/packages/a1/6c/4811dc15fbbf3029deb0e1f4e789c5ccd6e82ef64e6456280cfa1e7b5500/gb2seq-0.2.2.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.2 2023-05-21T14:57:07,584 Found link https://files.pythonhosted.org/packages/c6/40/293f9e79b376f355e63034a45f37799fbdeae47b8f4e61d8734dfa6478f3/gb2seq-0.2.3.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.3 2023-05-21T14:57:07,585 Found link https://files.pythonhosted.org/packages/63/93/cd71b29d455df9373a2970c83e812829bbb3047f9f1f7be17cd8392e83e2/gb2seq-0.2.4.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.4 2023-05-21T14:57:07,586 Found link https://files.pythonhosted.org/packages/ae/e1/74990aa8275bd0b902ca68c955ad0948b5cec820dc08d18714e6ccf3b617/gb2seq-0.2.5.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.5 2023-05-21T14:57:07,587 Found link https://files.pythonhosted.org/packages/fc/63/32e3a10b3b022404edff36b4ebb6a46e93d1e2b9014a2a94938da9fb0111/gb2seq-0.2.6.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.6 2023-05-21T14:57:07,587 Found link https://files.pythonhosted.org/packages/06/22/99e49bd674aff1241f15a7bee8018f4995aa4c69641fdd8db8f6813c127c/gb2seq-0.2.7.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.7 2023-05-21T14:57:07,588 Found link https://files.pythonhosted.org/packages/83/43/34726e200ee167af1a320f6085407c98b8017eddfeee127f9547be240770/gb2seq-0.2.8.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.8 2023-05-21T14:57:07,588 Found link https://files.pythonhosted.org/packages/32/82/5313ebd295f1143f0e053b2d2fbf8cedbe053a6aea99bdf5024020369dab/gb2seq-0.2.9.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.9 2023-05-21T14:57:07,589 Found link https://files.pythonhosted.org/packages/8e/42/c6ac0b65a00bbac68744313624e6248fd07ef1d75d0de72c504fcba61bf9/gb2seq-0.2.10.tar.gz (from https://pypi.org/simple/gb2seq/), version: 0.2.10 2023-05-21T14:57:07,590 Fetching project page and analyzing links: https://www.piwheels.org/simple/gb2seq/ 2023-05-21T14:57:07,591 Getting page https://www.piwheels.org/simple/gb2seq/ 2023-05-21T14:57:07,593 Found index url https://www.piwheels.org/simple/ 2023-05-21T14:57:07,819 Fetched page https://www.piwheels.org/simple/gb2seq/ as text/html 2023-05-21T14:57:07,826 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.8-py3-none-any.whl#sha256=d36ccac027663d57fa013430a0c440615ef37361de3a97f75a8a92258629456f (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:57:07,827 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.7-py3-none-any.whl#sha256=cd99209a60507ef01add9e58b0767a0431b4eb7486702d67a24421ea439a86b7 (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:57:07,828 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.5-py3-none-any.whl#sha256=ba29859097ef0c4c03f69e5779955dea2f604d4a4e137117b965976058ed4420 (from https://www.piwheels.org/simple/gb2seq/) (requires-python:>=3.7,<4.0) 2023-05-21T14:57:07,828 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.4-py3-none-any.whl#sha256=493b0d4f3a02acbdd938d7ad53c9ab146f53eb3af0420b1f0cae431cacef7150 (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:57:07,829 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.3-py3-none-any.whl#sha256=990a6513d22978222ab2478878acb0f5713639de08f1dcc4e2a4823289ade38e (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:57:07,829 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.2-py3-none-any.whl#sha256=634652cec9faba6521ea7d2378c41a4d0b83caae8972b63b844e81103b647ce2 (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:57:07,829 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.1-py3-none-any.whl#sha256=03ab29eb09f1f43020c86751aa1a31ff88132e478c0091cb0c78024be843d67f (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:57:07,830 Skipping link: No binaries permitted for gb2seq: https://www.piwheels.org/simple/gb2seq/gb2seq-0.2.0-py3-none-any.whl#sha256=bea2839bcf01cba97d0267c69da6fdc60537d2f4bcf0e776183240de252449fe (from https://www.piwheels.org/simple/gb2seq/) 2023-05-21T14:57:07,830 Skipping link: not a file: https://www.piwheels.org/simple/gb2seq/ 2023-05-21T14:57:07,831 Skipping link: not a file: https://pypi.org/simple/gb2seq/ 2023-05-21T14:57:07,867 Given no hashes to check 1 links for project 'gb2seq': discarding no candidates 2023-05-21T14:57:07,898 Collecting gb2seq==0.2.9 2023-05-21T14:57:07,902 Created temporary directory: /tmp/pip-unpack-6r4er8da 2023-05-21T14:57:08,083 Downloading gb2seq-0.2.9.tar.gz (63 kB) 2023-05-21T14:57:08,310 Added gb2seq==0.2.9 from https://files.pythonhosted.org/packages/32/82/5313ebd295f1143f0e053b2d2fbf8cedbe053a6aea99bdf5024020369dab/gb2seq-0.2.9.tar.gz to build tracker '/tmp/pip-build-tracker-yupeunb4' 2023-05-21T14:57:08,314 Running setup.py (path:/tmp/pip-wheel-ssanq7zs/gb2seq_e98ec05cf77d44ce9bd65ae8b5eb7a1f/setup.py) egg_info for package gb2seq 2023-05-21T14:57:08,316 Created temporary directory: /tmp/pip-pip-egg-info-ues1errr 2023-05-21T14:57:08,316 Preparing metadata (setup.py): started 2023-05-21T14:57:08,318 Running command python setup.py egg_info 2023-05-21T14:57:09,814 running egg_info 2023-05-21T14:57:09,816 creating /tmp/pip-pip-egg-info-ues1errr/gb2seq.egg-info 2023-05-21T14:57:09,878 writing /tmp/pip-pip-egg-info-ues1errr/gb2seq.egg-info/PKG-INFO 2023-05-21T14:57:09,882 writing dependency_links to /tmp/pip-pip-egg-info-ues1errr/gb2seq.egg-info/dependency_links.txt 2023-05-21T14:57:09,887 writing requirements to /tmp/pip-pip-egg-info-ues1errr/gb2seq.egg-info/requires.txt 2023-05-21T14:57:09,889 writing top-level names to /tmp/pip-pip-egg-info-ues1errr/gb2seq.egg-info/top_level.txt 2023-05-21T14:57:09,892 writing manifest file '/tmp/pip-pip-egg-info-ues1errr/gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:57:10,162 reading manifest file '/tmp/pip-pip-egg-info-ues1errr/gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:57:10,165 reading manifest template 'MANIFEST.in' 2023-05-21T14:57:10,167 warning: no files found matching 'data/*.fasta' 2023-05-21T14:57:10,168 warning: no files found matching 'data/*.gb' 2023-05-21T14:57:10,168 adding license file 'AUTHORS' 2023-05-21T14:57:10,174 writing manifest file '/tmp/pip-pip-egg-info-ues1errr/gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:57:10,294 Preparing metadata (setup.py): finished with status 'done' 2023-05-21T14:57:10,307 Source in /tmp/pip-wheel-ssanq7zs/gb2seq_e98ec05cf77d44ce9bd65ae8b5eb7a1f has version 0.2.9, which satisfies requirement gb2seq==0.2.9 from https://files.pythonhosted.org/packages/32/82/5313ebd295f1143f0e053b2d2fbf8cedbe053a6aea99bdf5024020369dab/gb2seq-0.2.9.tar.gz 2023-05-21T14:57:10,309 Removed gb2seq==0.2.9 from https://files.pythonhosted.org/packages/32/82/5313ebd295f1143f0e053b2d2fbf8cedbe053a6aea99bdf5024020369dab/gb2seq-0.2.9.tar.gz from build tracker '/tmp/pip-build-tracker-yupeunb4' 2023-05-21T14:57:10,320 Created temporary directory: /tmp/pip-unpack-yknvk_x0 2023-05-21T14:57:10,321 Building wheels for collected packages: gb2seq 2023-05-21T14:57:10,330 Created temporary directory: /tmp/pip-wheel-s22i1mj9 2023-05-21T14:57:10,331 Building wheel for gb2seq (setup.py): started 2023-05-21T14:57:10,333 Destination directory: /tmp/pip-wheel-s22i1mj9 2023-05-21T14:57:10,333 Running command python setup.py bdist_wheel 2023-05-21T14:57:11,874 running bdist_wheel 2023-05-21T14:57:12,563 running build 2023-05-21T14:57:12,563 running build_py 2023-05-21T14:57:12,635 creating build 2023-05-21T14:57:12,636 creating build/lib 2023-05-21T14:57:12,638 creating build/lib/gb2seq 2023-05-21T14:57:12,641 copying gb2seq/change.py -> build/lib/gb2seq 2023-05-21T14:57:12,646 copying gb2seq/__init__.py -> build/lib/gb2seq 2023-05-21T14:57:12,649 copying gb2seq/translate.py -> build/lib/gb2seq 2023-05-21T14:57:12,655 copying gb2seq/sars2.py -> build/lib/gb2seq 2023-05-21T14:57:12,659 copying gb2seq/features.py -> build/lib/gb2seq 2023-05-21T14:57:12,665 copying gb2seq/alignment.py -> build/lib/gb2seq 2023-05-21T14:57:12,671 copying gb2seq/genome.py -> build/lib/gb2seq 2023-05-21T14:57:12,675 copying gb2seq/variants.py -> build/lib/gb2seq 2023-05-21T14:57:12,679 copying gb2seq/annotate.py -> build/lib/gb2seq 2023-05-21T14:57:12,684 copying gb2seq/checker.py -> build/lib/gb2seq 2023-05-21T14:57:12,688 running egg_info 2023-05-21T14:57:12,853 writing gb2seq.egg-info/PKG-INFO 2023-05-21T14:57:12,857 writing dependency_links to gb2seq.egg-info/dependency_links.txt 2023-05-21T14:57:12,863 writing requirements to gb2seq.egg-info/requires.txt 2023-05-21T14:57:12,867 writing top-level names to gb2seq.egg-info/top_level.txt 2023-05-21T14:57:12,942 reading manifest file 'gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:57:12,949 reading manifest template 'MANIFEST.in' 2023-05-21T14:57:12,951 warning: no files found matching 'data/*.fasta' 2023-05-21T14:57:12,952 warning: no files found matching 'data/*.gb' 2023-05-21T14:57:12,953 adding license file 'AUTHORS' 2023-05-21T14:57:12,961 writing manifest file 'gb2seq.egg-info/SOURCES.txt' 2023-05-21T14:57:12,969 running build_scripts 2023-05-21T14:57:12,970 creating build/scripts-3.7 2023-05-21T14:57:12,973 copying and adjusting bin/annotate-genome.py -> build/scripts-3.7 2023-05-21T14:57:12,977 copying and adjusting bin/describe-feature.py -> build/scripts-3.7 2023-05-21T14:57:12,982 copying and adjusting bin/describe-genome.py -> build/scripts-3.7 2023-05-21T14:57:12,988 copying and adjusting bin/describe-site.py -> build/scripts-3.7 2023-05-21T14:57:12,991 changing mode of build/scripts-3.7/annotate-genome.py from 644 to 755 2023-05-21T14:57:12,993 changing mode of build/scripts-3.7/describe-feature.py from 644 to 755 2023-05-21T14:57:12,994 changing mode of build/scripts-3.7/describe-genome.py from 644 to 755 2023-05-21T14:57:12,996 changing mode of build/scripts-3.7/describe-site.py from 644 to 755 2023-05-21T14:57:13,065 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-05-21T14:57:13,066 !! 2023-05-21T14:57:13,067 ******************************************************************************** 2023-05-21T14:57:13,067 Please avoid running ``setup.py`` directly. 2023-05-21T14:57:13,068 Instead, use pypa/build, pypa/installer, pypa/build or 2023-05-21T14:57:13,068 other standards-based tools. 2023-05-21T14:57:13,069 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-05-21T14:57:13,069 ******************************************************************************** 2023-05-21T14:57:13,070 !! 2023-05-21T14:57:13,070 self.initialize_options() 2023-05-21T14:57:13,129 installing to build/bdist.linux-armv7l/wheel 2023-05-21T14:57:13,129 running install 2023-05-21T14:57:13,189 running install_lib 2023-05-21T14:57:13,256 creating build/bdist.linux-armv7l 2023-05-21T14:57:13,257 creating build/bdist.linux-armv7l/wheel 2023-05-21T14:57:13,261 creating build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,263 copying build/lib/gb2seq/change.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,267 copying build/lib/gb2seq/__init__.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,271 copying build/lib/gb2seq/translate.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,277 copying build/lib/gb2seq/sars2.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,281 copying build/lib/gb2seq/features.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,286 copying build/lib/gb2seq/alignment.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,293 copying build/lib/gb2seq/genome.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,297 copying build/lib/gb2seq/variants.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,300 copying build/lib/gb2seq/annotate.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,305 copying build/lib/gb2seq/checker.py -> build/bdist.linux-armv7l/wheel/gb2seq 2023-05-21T14:57:13,309 running install_egg_info 2023-05-21T14:57:13,382 Copying gb2seq.egg-info to build/bdist.linux-armv7l/wheel/gb2seq-0.2.9-py3.7.egg-info 2023-05-21T14:57:13,402 running install_scripts 2023-05-21T14:57:13,405 creating build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data 2023-05-21T14:57:13,406 creating build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data/scripts 2023-05-21T14:57:13,408 copying build/scripts-3.7/describe-feature.py -> build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data/scripts 2023-05-21T14:57:13,413 copying build/scripts-3.7/describe-site.py -> build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data/scripts 2023-05-21T14:57:13,417 copying build/scripts-3.7/annotate-genome.py -> build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data/scripts 2023-05-21T14:57:13,420 copying build/scripts-3.7/describe-genome.py -> build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data/scripts 2023-05-21T14:57:13,424 changing mode of build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data/scripts/describe-feature.py to 755 2023-05-21T14:57:13,425 changing mode of build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data/scripts/describe-site.py to 755 2023-05-21T14:57:13,426 changing mode of build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data/scripts/annotate-genome.py to 755 2023-05-21T14:57:13,427 changing mode of build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.data/scripts/describe-genome.py to 755 2023-05-21T14:57:13,454 creating build/bdist.linux-armv7l/wheel/gb2seq-0.2.9.dist-info/WHEEL 2023-05-21T14:57:13,458 creating '/tmp/pip-wheel-s22i1mj9/gb2seq-0.2.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-05-21T14:57:13,463 adding 'gb2seq/__init__.py' 2023-05-21T14:57:13,477 adding 'gb2seq/alignment.py' 2023-05-21T14:57:13,481 adding 'gb2seq/annotate.py' 2023-05-21T14:57:13,485 adding 'gb2seq/change.py' 2023-05-21T14:57:13,488 adding 'gb2seq/checker.py' 2023-05-21T14:57:13,497 adding 'gb2seq/features.py' 2023-05-21T14:57:13,500 adding 'gb2seq/genome.py' 2023-05-21T14:57:13,503 adding 'gb2seq/sars2.py' 2023-05-21T14:57:13,510 adding 'gb2seq/translate.py' 2023-05-21T14:57:13,513 adding 'gb2seq/variants.py' 2023-05-21T14:57:13,518 adding 'gb2seq-0.2.9.data/scripts/annotate-genome.py' 2023-05-21T14:57:13,521 adding 'gb2seq-0.2.9.data/scripts/describe-feature.py' 2023-05-21T14:57:13,527 adding 'gb2seq-0.2.9.data/scripts/describe-genome.py' 2023-05-21T14:57:13,531 adding 'gb2seq-0.2.9.data/scripts/describe-site.py' 2023-05-21T14:57:13,535 adding 'gb2seq-0.2.9.dist-info/AUTHORS' 2023-05-21T14:57:13,537 adding 'gb2seq-0.2.9.dist-info/METADATA' 2023-05-21T14:57:13,539 adding 'gb2seq-0.2.9.dist-info/WHEEL' 2023-05-21T14:57:13,541 adding 'gb2seq-0.2.9.dist-info/top_level.txt' 2023-05-21T14:57:13,543 adding 'gb2seq-0.2.9.dist-info/RECORD' 2023-05-21T14:57:13,547 removing build/bdist.linux-armv7l/wheel 2023-05-21T14:57:13,711 Building wheel for gb2seq (setup.py): finished with status 'done' 2023-05-21T14:57:13,719 Created wheel for gb2seq: filename=gb2seq-0.2.9-py3-none-any.whl size=41527 sha256=3a1258f370e4afcf9a6488cb5946b4434c46a5b8ba430cdb04a40a6f57ff4bd1 2023-05-21T14:57:13,722 Stored in directory: /tmp/pip-ephem-wheel-cache-_bng_9rv/wheels/c1/1d/a8/05cc6f8a982e727cd1b3b634f62692cb361c5c4bae393d2026 2023-05-21T14:57:13,748 Successfully built gb2seq 2023-05-21T14:57:13,758 Removed build tracker: '/tmp/pip-build-tracker-yupeunb4'