2023-06-01T21:28:33,005 Created temporary directory: /tmp/pip-build-tracker-c17xx01u
2023-06-01T21:28:33,006 Initialized build tracking at /tmp/pip-build-tracker-c17xx01u
2023-06-01T21:28:33,006 Created build tracker: /tmp/pip-build-tracker-c17xx01u
2023-06-01T21:28:33,006 Entered build tracker: /tmp/pip-build-tracker-c17xx01u
2023-06-01T21:28:33,007 Created temporary directory: /tmp/pip-wheel-lnmqpkqc
2023-06-01T21:28:33,010 Created temporary directory: /tmp/pip-ephem-wheel-cache-t0dbdsfw
2023-06-01T21:28:33,033 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-01T21:28:33,036 2 location(s) to search for versions of pyvariant:
2023-06-01T21:28:33,036 * https://pypi.org/simple/pyvariant/
2023-06-01T21:28:33,036 * https://www.piwheels.org/simple/pyvariant/
2023-06-01T21:28:33,036 Fetching project page and analyzing links: https://pypi.org/simple/pyvariant/
2023-06-01T21:28:33,037 Getting page https://pypi.org/simple/pyvariant/
2023-06-01T21:28:33,039 Found index url https://pypi.org/simple/
2023-06-01T21:28:33,088 Fetched page https://pypi.org/simple/pyvariant/ as application/vnd.pypi.simple.v1+json
2023-06-01T21:28:33,090   Skipping link: No binaries permitted for pyvariant: https://files.pythonhosted.org/packages/86/a1/ef8223dc7b5bb7e5c61bb366d80b4ab6ec5a24b5cb85796bd09142e86fdc/pyvariant-2.0.0-py3-none-any.whl (from https://pypi.org/simple/pyvariant/) (requires-python:>=3.8)
2023-06-01T21:28:33,091   Found link https://files.pythonhosted.org/packages/2f/52/a01bab09cc4c16f60a8d1eda1611c06f6388a7e809459718a398a49b5310/pyvariant-2.0.0.tar.gz (from https://pypi.org/simple/pyvariant/) (requires-python:>=3.8), version: 2.0.0
2023-06-01T21:28:33,091   Skipping link: No binaries permitted for pyvariant: https://files.pythonhosted.org/packages/f4/d0/7327c069fce0b0b0bf0b192b20c61c74ca05331c283cdf30936d426e0fa2/pyvariant-2.1.0-py3-none-any.whl (from https://pypi.org/simple/pyvariant/) (requires-python:>=3.8)
2023-06-01T21:28:33,092   Found link https://files.pythonhosted.org/packages/8a/85/2218c62f28f922b1c9a736e0f72a5cb2c021c4d600ff9bb71941b6fdce94/pyvariant-2.1.0.tar.gz (from https://pypi.org/simple/pyvariant/) (requires-python:>=3.8), version: 2.1.0
2023-06-01T21:28:33,092   Skipping link: No binaries permitted for pyvariant: https://files.pythonhosted.org/packages/0b/c4/1d9a846f685844d193845583dfa75cfb663ef020feec688fbea54f72d4cc/pyvariant-2.2.0-py3-none-any.whl (from https://pypi.org/simple/pyvariant/) (requires-python:>=3.8)
2023-06-01T21:28:33,093   Found link https://files.pythonhosted.org/packages/b5/02/d9ed8660a2a74e7bd517c0412e901cb399f9f7e268351dc92de605a055fc/pyvariant-2.2.0.tar.gz (from https://pypi.org/simple/pyvariant/) (requires-python:>=3.8), version: 2.2.0
2023-06-01T21:28:33,093 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyvariant/
2023-06-01T21:28:33,093 Getting page https://www.piwheels.org/simple/pyvariant/
2023-06-01T21:28:33,094 Found index url https://www.piwheels.org/simple/
2023-06-01T21:28:33,254 Fetched page https://www.piwheels.org/simple/pyvariant/ as text/html
2023-06-01T21:28:33,256   Skipping link: No binaries permitted for pyvariant: https://www.piwheels.org/simple/pyvariant/pyvariant-2.1.0-py3-none-any.whl#sha256=9c3953fe80a4ca34ec4940e2d73334b5c67bd554661bb66cda8191d41c8cad93 (from https://www.piwheels.org/simple/pyvariant/) (requires-python:>=3.8)
2023-06-01T21:28:33,256   Skipping link: No binaries permitted for pyvariant: https://www.piwheels.org/simple/pyvariant/pyvariant-2.0.0-py3-none-any.whl#sha256=2f66ff56bd859069dd73045700d752ccb92f62dbd01197add3553abb1bc9888c (from https://www.piwheels.org/simple/pyvariant/) (requires-python:>=3.8)
2023-06-01T21:28:33,256 Skipping link: not a file: https://www.piwheels.org/simple/pyvariant/
2023-06-01T21:28:33,256 Skipping link: not a file: https://pypi.org/simple/pyvariant/
2023-06-01T21:28:33,274 Given no hashes to check 1 links for project 'pyvariant': discarding no candidates
2023-06-01T21:28:33,291 Collecting pyvariant==2.2.0
2023-06-01T21:28:33,293   Created temporary directory: /tmp/pip-unpack-e4lopbk2
2023-06-01T21:28:33,414   Downloading pyvariant-2.2.0.tar.gz (60 kB)
2023-06-01T21:28:33,522   Added pyvariant==2.2.0 from https://files.pythonhosted.org/packages/b5/02/d9ed8660a2a74e7bd517c0412e901cb399f9f7e268351dc92de605a055fc/pyvariant-2.2.0.tar.gz to build tracker '/tmp/pip-build-tracker-c17xx01u'
2023-06-01T21:28:33,525   Created temporary directory: /tmp/pip-build-env-ozed741j
2023-06-01T21:28:33,535   Installing build dependencies: started
2023-06-01T21:28:33,536   Running command pip subprocess to install build dependencies
2023-06-01T21:28:34,698   Using pip 23.1.2 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-06-01T21:28:35,052   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-01T21:28:36,721   Collecting setuptools
2023-06-01T21:28:36,811     Using cached https://www.piwheels.org/simple/setuptools/setuptools-67.8.0-py3-none-any.whl (1.1 MB)
2023-06-01T21:28:38,479   Installing collected packages: setuptools
2023-06-01T21:28:40,627   Successfully installed setuptools-67.8.0
2023-06-01T21:28:40,883   Installing build dependencies: finished with status 'done'
2023-06-01T21:28:40,887   Getting requirements to build wheel: started
2023-06-01T21:28:40,889   Running command Getting requirements to build wheel
2023-06-01T21:28:41,516   running egg_info
2023-06-01T21:28:41,519   writing pyvariant.egg-info/PKG-INFO
2023-06-01T21:28:41,522   writing dependency_links to pyvariant.egg-info/dependency_links.txt
2023-06-01T21:28:41,524   writing entry points to pyvariant.egg-info/entry_points.txt
2023-06-01T21:28:41,526   writing requirements to pyvariant.egg-info/requires.txt
2023-06-01T21:28:41,527   writing top-level names to pyvariant.egg-info/top_level.txt
2023-06-01T21:28:41,545   reading manifest file 'pyvariant.egg-info/SOURCES.txt'
2023-06-01T21:28:41,548   adding license file 'LICENSE'
2023-06-01T21:28:41,551   writing manifest file 'pyvariant.egg-info/SOURCES.txt'
2023-06-01T21:28:41,613   Getting requirements to build wheel: finished with status 'done'
2023-06-01T21:28:41,623   Installing backend dependencies: started
2023-06-01T21:28:41,624   Running command pip subprocess to install backend dependencies
2023-06-01T21:28:42,778   Using pip 23.1.2 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2023-06-01T21:28:43,126   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-01T21:28:43,554   Collecting wheel
2023-06-01T21:28:43,571     Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB)
2023-06-01T21:28:44,862   Installing collected packages: wheel
2023-06-01T21:28:45,081     Creating /tmp/pip-build-env-ozed741j/normal/bin
2023-06-01T21:28:45,083     changing mode of /tmp/pip-build-env-ozed741j/normal/bin/wheel to 755
2023-06-01T21:28:45,096   Successfully installed wheel-0.40.0
2023-06-01T21:28:45,311   Installing backend dependencies: finished with status 'done'
2023-06-01T21:28:45,313   Created temporary directory: /tmp/pip-modern-metadata-nm6p4273
2023-06-01T21:28:45,316   Preparing metadata (pyproject.toml): started
2023-06-01T21:28:45,317   Running command Preparing metadata (pyproject.toml)
2023-06-01T21:28:45,876   running dist_info
2023-06-01T21:28:45,896   creating /tmp/pip-modern-metadata-nm6p4273/pyvariant.egg-info
2023-06-01T21:28:45,902   writing /tmp/pip-modern-metadata-nm6p4273/pyvariant.egg-info/PKG-INFO
2023-06-01T21:28:45,906   writing dependency_links to /tmp/pip-modern-metadata-nm6p4273/pyvariant.egg-info/dependency_links.txt
2023-06-01T21:28:45,908   writing entry points to /tmp/pip-modern-metadata-nm6p4273/pyvariant.egg-info/entry_points.txt
2023-06-01T21:28:45,909   writing requirements to /tmp/pip-modern-metadata-nm6p4273/pyvariant.egg-info/requires.txt
2023-06-01T21:28:45,910   writing top-level names to /tmp/pip-modern-metadata-nm6p4273/pyvariant.egg-info/top_level.txt
2023-06-01T21:28:45,912   writing manifest file '/tmp/pip-modern-metadata-nm6p4273/pyvariant.egg-info/SOURCES.txt'
2023-06-01T21:28:45,930   reading manifest file '/tmp/pip-modern-metadata-nm6p4273/pyvariant.egg-info/SOURCES.txt'
2023-06-01T21:28:45,932   adding license file 'LICENSE'
2023-06-01T21:28:45,935   writing manifest file '/tmp/pip-modern-metadata-nm6p4273/pyvariant.egg-info/SOURCES.txt'
2023-06-01T21:28:45,936   creating '/tmp/pip-modern-metadata-nm6p4273/pyvariant-2.2.0.dist-info'
2023-06-01T21:28:46,104   Preparing metadata (pyproject.toml): finished with status 'done'
2023-06-01T21:28:46,111   Source in /tmp/pip-wheel-lnmqpkqc/pyvariant_7ee743cdd1884bae8f1a6eba259f8f37 has version 2.2.0, which satisfies requirement pyvariant==2.2.0 from https://files.pythonhosted.org/packages/b5/02/d9ed8660a2a74e7bd517c0412e901cb399f9f7e268351dc92de605a055fc/pyvariant-2.2.0.tar.gz
2023-06-01T21:28:46,112   Removed pyvariant==2.2.0 from https://files.pythonhosted.org/packages/b5/02/d9ed8660a2a74e7bd517c0412e901cb399f9f7e268351dc92de605a055fc/pyvariant-2.2.0.tar.gz from build tracker '/tmp/pip-build-tracker-c17xx01u'
2023-06-01T21:28:46,119 Created temporary directory: /tmp/pip-unpack-9gjnmd_2
2023-06-01T21:28:46,119 Building wheels for collected packages: pyvariant
2023-06-01T21:28:46,124   Created temporary directory: /tmp/pip-wheel-r7ebdprt
2023-06-01T21:28:46,124   Destination directory: /tmp/pip-wheel-r7ebdprt
2023-06-01T21:28:46,126   Building wheel for pyvariant (pyproject.toml): started
2023-06-01T21:28:46,127   Running command Building wheel for pyvariant (pyproject.toml)
2023-06-01T21:28:46,708   running bdist_wheel
2023-06-01T21:28:46,740   running build
2023-06-01T21:28:46,740   running build_py
2023-06-01T21:28:46,748   creating build
2023-06-01T21:28:46,748   creating build/lib
2023-06-01T21:28:46,749   creating build/lib/pyvariant
2023-06-01T21:28:46,750   copying pyvariant/files.py -> build/lib/pyvariant
2023-06-01T21:28:46,752   copying pyvariant/constants.py -> build/lib/pyvariant
2023-06-01T21:28:46,754   copying pyvariant/cli.py -> build/lib/pyvariant
2023-06-01T21:28:46,755   copying pyvariant/sequence.py -> build/lib/pyvariant
2023-06-01T21:28:46,757   copying pyvariant/core.py -> build/lib/pyvariant
2023-06-01T21:28:46,762   copying pyvariant/tables.py -> build/lib/pyvariant
2023-06-01T21:28:46,763   copying pyvariant/ensembl_cache.py -> build/lib/pyvariant
2023-06-01T21:28:46,766   copying pyvariant/utils.py -> build/lib/pyvariant
2023-06-01T21:28:46,768   copying pyvariant/parser.py -> build/lib/pyvariant
2023-06-01T21:28:46,770   copying pyvariant/variants.py -> build/lib/pyvariant
2023-06-01T21:28:46,773   copying pyvariant/regex.py -> build/lib/pyvariant
2023-06-01T21:28:46,775   copying pyvariant/__init__.py -> build/lib/pyvariant
2023-06-01T21:28:46,776   copying pyvariant/ensembl_release.py -> build/lib/pyvariant
2023-06-01T21:28:46,778   running egg_info
2023-06-01T21:28:46,794   writing pyvariant.egg-info/PKG-INFO
2023-06-01T21:28:46,796   writing dependency_links to pyvariant.egg-info/dependency_links.txt
2023-06-01T21:28:46,798   writing entry points to pyvariant.egg-info/entry_points.txt
2023-06-01T21:28:46,799   writing requirements to pyvariant.egg-info/requires.txt
2023-06-01T21:28:46,800   writing top-level names to pyvariant.egg-info/top_level.txt
2023-06-01T21:28:46,809   reading manifest file 'pyvariant.egg-info/SOURCES.txt'
2023-06-01T21:28:46,811   adding license file 'LICENSE'
2023-06-01T21:28:46,814   writing manifest file 'pyvariant.egg-info/SOURCES.txt'
2023-06-01T21:28:46,816   /tmp/pip-build-env-ozed741j/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:201: _Warning: Package 'pyvariant.data' is absent from the `packages` configuration.
2023-06-01T21:28:46,817   !!

2023-06-01T21:28:46,817           ********************************************************************************
2023-06-01T21:28:46,817           ############################
2023-06-01T21:28:46,817           # Package would be ignored #
2023-06-01T21:28:46,817           ############################
2023-06-01T21:28:46,817           Python recognizes 'pyvariant.data' as an importable package[^1],
2023-06-01T21:28:46,818           but it is absent from setuptools' `packages` configuration.

2023-06-01T21:28:46,818           This leads to an ambiguous overall configuration. If you want to distribute this
2023-06-01T21:28:46,818           package, please make sure that 'pyvariant.data' is explicitly added
2023-06-01T21:28:46,818           to the `packages` configuration field.

2023-06-01T21:28:46,818           Alternatively, you can also rely on setuptools' discovery methods
2023-06-01T21:28:46,819           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-06-01T21:28:46,819           instead of `find_packages(...)`/`find:`).

2023-06-01T21:28:46,819           You can read more about "package discovery" on setuptools documentation page:

2023-06-01T21:28:46,819           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-06-01T21:28:46,819           If you don't want 'pyvariant.data' to be distributed and are
2023-06-01T21:28:46,820           already explicitly excluding 'pyvariant.data' via
2023-06-01T21:28:46,820           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-06-01T21:28:46,820           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-06-01T21:28:46,820           combination with a more fine grained `package-data` configuration.

2023-06-01T21:28:46,820           You can read more about "package data files" on setuptools documentation page:

2023-06-01T21:28:46,820           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-06-01T21:28:46,821           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-06-01T21:28:46,821                 even if it does not contain any `.py` files.
2023-06-01T21:28:46,821                 On the other hand, currently there is no concept of package data
2023-06-01T21:28:46,821                 directory, all directories are treated like packages.
2023-06-01T21:28:46,821           ********************************************************************************

2023-06-01T21:28:46,822   !!
2023-06-01T21:28:46,822     check.warn(importable)
2023-06-01T21:28:46,822   creating build/lib/pyvariant/data
2023-06-01T21:28:46,822   copying pyvariant/data/empty.fa -> build/lib/pyvariant/data
2023-06-01T21:28:46,822   copying pyvariant/data/empty.fa.fai -> build/lib/pyvariant/data
2023-06-01T21:28:46,838   installing to build/bdist.linux-armv7l/wheel
2023-06-01T21:28:46,838   running install
2023-06-01T21:28:46,864   running install_lib
2023-06-01T21:28:46,870   creating build/bdist.linux-armv7l
2023-06-01T21:28:46,871   creating build/bdist.linux-armv7l/wheel
2023-06-01T21:28:46,872   creating build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,873   copying build/lib/pyvariant/files.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,875   copying build/lib/pyvariant/constants.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,877   copying build/lib/pyvariant/cli.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,879   creating build/bdist.linux-armv7l/wheel/pyvariant/data
2023-06-01T21:28:46,880   copying build/lib/pyvariant/data/empty.fa -> build/bdist.linux-armv7l/wheel/pyvariant/data
2023-06-01T21:28:46,882   copying build/lib/pyvariant/data/empty.fa.fai -> build/bdist.linux-armv7l/wheel/pyvariant/data
2023-06-01T21:28:46,884   copying build/lib/pyvariant/sequence.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,886   copying build/lib/pyvariant/core.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,890   copying build/lib/pyvariant/tables.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,892   copying build/lib/pyvariant/ensembl_cache.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,894   copying build/lib/pyvariant/utils.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,896   copying build/lib/pyvariant/parser.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,898   copying build/lib/pyvariant/variants.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,901   copying build/lib/pyvariant/regex.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,904   copying build/lib/pyvariant/__init__.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,905   copying build/lib/pyvariant/ensembl_release.py -> build/bdist.linux-armv7l/wheel/pyvariant
2023-06-01T21:28:46,907   running install_egg_info
2023-06-01T21:28:46,917   Copying pyvariant.egg-info to build/bdist.linux-armv7l/wheel/pyvariant-2.2.0-py3.9.egg-info
2023-06-01T21:28:46,930   running install_scripts
2023-06-01T21:28:46,952   creating build/bdist.linux-armv7l/wheel/pyvariant-2.2.0.dist-info/WHEEL
2023-06-01T21:28:46,954   creating '/tmp/pip-wheel-r7ebdprt/.tmp-pla125o3/pyvariant-2.2.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-06-01T21:28:46,957   adding 'pyvariant/__init__.py'
2023-06-01T21:28:46,958   adding 'pyvariant/cli.py'
2023-06-01T21:28:46,959   adding 'pyvariant/constants.py'
2023-06-01T21:28:46,970   adding 'pyvariant/core.py'
2023-06-01T21:28:46,973   adding 'pyvariant/ensembl_cache.py'
2023-06-01T21:28:46,975   adding 'pyvariant/ensembl_release.py'
2023-06-01T21:28:46,977   adding 'pyvariant/files.py'
2023-06-01T21:28:46,978   adding 'pyvariant/parser.py'
2023-06-01T21:28:46,980   adding 'pyvariant/regex.py'
2023-06-01T21:28:46,982   adding 'pyvariant/sequence.py'
2023-06-01T21:28:46,983   adding 'pyvariant/tables.py'
2023-06-01T21:28:46,985   adding 'pyvariant/utils.py'
2023-06-01T21:28:46,988   adding 'pyvariant/variants.py'
2023-06-01T21:28:46,990   adding 'pyvariant/data/empty.fa'
2023-06-01T21:28:46,991   adding 'pyvariant/data/empty.fa.fai'
2023-06-01T21:28:46,993   adding 'pyvariant-2.2.0.dist-info/LICENSE'
2023-06-01T21:28:46,995   adding 'pyvariant-2.2.0.dist-info/METADATA'
2023-06-01T21:28:46,996   adding 'pyvariant-2.2.0.dist-info/WHEEL'
2023-06-01T21:28:46,997   adding 'pyvariant-2.2.0.dist-info/entry_points.txt'
2023-06-01T21:28:46,998   adding 'pyvariant-2.2.0.dist-info/top_level.txt'
2023-06-01T21:28:46,999   adding 'pyvariant-2.2.0.dist-info/zip-safe'
2023-06-01T21:28:47,000   adding 'pyvariant-2.2.0.dist-info/RECORD'
2023-06-01T21:28:47,002   removing build/bdist.linux-armv7l/wheel
2023-06-01T21:28:47,082   Building wheel for pyvariant (pyproject.toml): finished with status 'done'
2023-06-01T21:28:47,088   Created wheel for pyvariant: filename=pyvariant-2.2.0-py3-none-any.whl size=47559 sha256=4cc53f7f62b215c1a08f782de50b9d1da9900b360922d4b5fd92de76f0a6c06d
2023-06-01T21:28:47,089   Stored in directory: /tmp/pip-ephem-wheel-cache-t0dbdsfw/wheels/18/ac/b0/60732024911f935fb0fc8e7c2d70859345819ecf90df44d8a8
2023-06-01T21:28:47,102 Successfully built pyvariant
2023-06-01T21:28:47,106 Removed build tracker: '/tmp/pip-build-tracker-c17xx01u'