2023-06-19T23:37:24,243 Created temporary directory: /tmp/pip-build-tracker-6errtal8
2023-06-19T23:37:24,246 Initialized build tracking at /tmp/pip-build-tracker-6errtal8
2023-06-19T23:37:24,247 Created build tracker: /tmp/pip-build-tracker-6errtal8
2023-06-19T23:37:24,247 Entered build tracker: /tmp/pip-build-tracker-6errtal8
2023-06-19T23:37:24,248 Created temporary directory: /tmp/pip-wheel-5kyeojgl
2023-06-19T23:37:24,256 Created temporary directory: /tmp/pip-ephem-wheel-cache-n3n4jyda
2023-06-19T23:37:24,308 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-06-19T23:37:24,316 2 location(s) to search for versions of tmkit:
2023-06-19T23:37:24,316 * https://pypi.org/simple/tmkit/
2023-06-19T23:37:24,316 * https://www.piwheels.org/simple/tmkit/
2023-06-19T23:37:24,317 Fetching project page and analyzing links: https://pypi.org/simple/tmkit/
2023-06-19T23:37:24,318 Getting page https://pypi.org/simple/tmkit/
2023-06-19T23:37:24,323 Found index url https://pypi.org/simple/
2023-06-19T23:37:24,435 Fetched page https://pypi.org/simple/tmkit/ as application/vnd.pypi.simple.v1+json
2023-06-19T23:37:24,438   Found link https://files.pythonhosted.org/packages/8d/e1/852206283668df1fa41bf4b2fde871294fb7f7c0ab96003a2e57c44f2f96/tmkit-0.0.0.1.tar.gz (from https://pypi.org/simple/tmkit/) (requires-python:>3.6), version: 0.0.0.1
2023-06-19T23:37:24,440   Found link https://files.pythonhosted.org/packages/e8/b5/c614baeefa3355b746c9a45dca41220164c7699f2b25e29ef9b8b7974f63/tmkit-0.0.0.2.tar.gz (from https://pypi.org/simple/tmkit/) (requires-python:>3.6), version: 0.0.0.2
2023-06-19T23:37:24,440 Fetching project page and analyzing links: https://www.piwheels.org/simple/tmkit/
2023-06-19T23:37:24,441 Getting page https://www.piwheels.org/simple/tmkit/
2023-06-19T23:37:24,443 Found index url https://www.piwheels.org/simple/
2023-06-19T23:37:24,666 Fetched page https://www.piwheels.org/simple/tmkit/ as text/html
2023-06-19T23:37:24,668 Skipping link: not a file: https://www.piwheels.org/simple/tmkit/
2023-06-19T23:37:24,669 Skipping link: not a file: https://pypi.org/simple/tmkit/
2023-06-19T23:37:24,702 Given no hashes to check 1 links for project 'tmkit': discarding no candidates
2023-06-19T23:37:24,733 Collecting tmkit==0.0.0.2
2023-06-19T23:37:24,738   Created temporary directory: /tmp/pip-unpack-t60snak6
2023-06-19T23:37:24,927   Downloading tmkit-0.0.0.2.tar.gz (103 kB)
2023-06-19T23:37:25,651   Added tmkit==0.0.0.2 from https://files.pythonhosted.org/packages/e8/b5/c614baeefa3355b746c9a45dca41220164c7699f2b25e29ef9b8b7974f63/tmkit-0.0.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-6errtal8'
2023-06-19T23:37:25,657   Running setup.py (path:/tmp/pip-wheel-5kyeojgl/tmkit_b5498e15a1d2453ba06b2a60cd91556d/setup.py) egg_info for package tmkit
2023-06-19T23:37:25,658   Created temporary directory: /tmp/pip-pip-egg-info-wy_sp1w1
2023-06-19T23:37:25,659   Preparing metadata (setup.py): started
2023-06-19T23:37:25,663   Running command python setup.py egg_info
2023-06-19T23:37:27,002   Warning: 'keywords' should be a list, got type 'tuple'
2023-06-19T23:37:27,256   running egg_info
2023-06-19T23:37:27,259   creating /tmp/pip-pip-egg-info-wy_sp1w1/tmkit.egg-info
2023-06-19T23:37:27,323   writing /tmp/pip-pip-egg-info-wy_sp1w1/tmkit.egg-info/PKG-INFO
2023-06-19T23:37:27,327   writing dependency_links to /tmp/pip-pip-egg-info-wy_sp1w1/tmkit.egg-info/dependency_links.txt
2023-06-19T23:37:27,332   writing requirements to /tmp/pip-pip-egg-info-wy_sp1w1/tmkit.egg-info/requires.txt
2023-06-19T23:37:27,334   writing top-level names to /tmp/pip-pip-egg-info-wy_sp1w1/tmkit.egg-info/top_level.txt
2023-06-19T23:37:27,337   writing manifest file '/tmp/pip-pip-egg-info-wy_sp1w1/tmkit.egg-info/SOURCES.txt'
2023-06-19T23:37:27,594   reading manifest file '/tmp/pip-pip-egg-info-wy_sp1w1/tmkit.egg-info/SOURCES.txt'
2023-06-19T23:37:27,597   adding license file 'LICENSE'
2023-06-19T23:37:27,614   writing manifest file '/tmp/pip-pip-egg-info-wy_sp1w1/tmkit.egg-info/SOURCES.txt'
2023-06-19T23:37:27,734   Preparing metadata (setup.py): finished with status 'done'
2023-06-19T23:37:27,747   Source in /tmp/pip-wheel-5kyeojgl/tmkit_b5498e15a1d2453ba06b2a60cd91556d has version 0.0.0.2, which satisfies requirement tmkit==0.0.0.2 from https://files.pythonhosted.org/packages/e8/b5/c614baeefa3355b746c9a45dca41220164c7699f2b25e29ef9b8b7974f63/tmkit-0.0.0.2.tar.gz
2023-06-19T23:37:27,749   Removed tmkit==0.0.0.2 from https://files.pythonhosted.org/packages/e8/b5/c614baeefa3355b746c9a45dca41220164c7699f2b25e29ef9b8b7974f63/tmkit-0.0.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-6errtal8'
2023-06-19T23:37:27,764 Created temporary directory: /tmp/pip-unpack-r5u0supu
2023-06-19T23:37:27,765 Building wheels for collected packages: tmkit
2023-06-19T23:37:27,774   Created temporary directory: /tmp/pip-wheel-9d6wsel9
2023-06-19T23:37:27,775   Building wheel for tmkit (setup.py): started
2023-06-19T23:37:27,777   Destination directory: /tmp/pip-wheel-9d6wsel9
2023-06-19T23:37:27,777   Running command python setup.py bdist_wheel
2023-06-19T23:37:29,061   Warning: 'keywords' should be a list, got type 'tuple'
2023-06-19T23:37:29,399   running bdist_wheel
2023-06-19T23:37:30,125   running build
2023-06-19T23:37:30,126   running build_py
2023-06-19T23:37:30,200   creating build
2023-06-19T23:37:30,202   creating build/lib
2023-06-19T23:37:30,203   creating build/lib/tmkit
2023-06-19T23:37:30,206   copying tmkit/msa.py -> build/lib/tmkit
2023-06-19T23:37:30,211   copying tmkit/mut.py -> build/lib/tmkit
2023-06-19T23:37:30,215   copying tmkit/collate.py -> build/lib/tmkit
2023-06-19T23:37:30,219   copying tmkit/topo.py -> build/lib/tmkit
2023-06-19T23:37:30,223   copying tmkit/vs.py -> build/lib/tmkit
2023-06-19T23:37:30,228   copying tmkit/mapping.py -> build/lib/tmkit
2023-06-19T23:37:30,232   copying tmkit/pl.py -> build/lib/tmkit
2023-06-19T23:37:30,235   copying tmkit/rrc.py -> build/lib/tmkit
2023-06-19T23:37:30,239   copying tmkit/seq.py -> build/lib/tmkit
2023-06-19T23:37:30,243   copying tmkit/cath.py -> build/lib/tmkit
2023-06-19T23:37:30,247   copying tmkit/feature.py -> build/lib/tmkit
2023-06-19T23:37:30,252   copying tmkit/ppi.py -> build/lib/tmkit
2023-06-19T23:37:30,256   copying tmkit/qc.py -> build/lib/tmkit
2023-06-19T23:37:30,260   copying tmkit/__init__.py -> build/lib/tmkit
2023-06-19T23:37:30,263   copying tmkit/SeqNetRR.py -> build/lib/tmkit
2023-06-19T23:37:30,267   copying tmkit/Path.py -> build/lib/tmkit
2023-06-19T23:37:30,271   copying tmkit/edge.py -> build/lib/tmkit
2023-06-19T23:37:30,276   creating build/lib/tmkit/contact
2023-06-19T23:37:30,278   copying tmkit/contact/__init__.py -> build/lib/tmkit/contact
2023-06-19T23:37:30,281   copying tmkit/contact/Evaluator.py -> build/lib/tmkit/contact
2023-06-19T23:37:30,286   copying tmkit/contact/Reader.py -> build/lib/tmkit/contact
2023-06-19T23:37:30,293   creating build/lib/tmkit/channel
2023-06-19T23:37:30,295   copying tmkit/channel/Workbench.py -> build/lib/tmkit/channel
2023-06-19T23:37:30,299   copying tmkit/channel/__init__.py -> build/lib/tmkit/channel
2023-06-19T23:37:30,304   creating build/lib/tmkit/base
2023-06-19T23:37:30,306   copying tmkit/base/Position.py -> build/lib/tmkit/base
2023-06-19T23:37:30,310   copying tmkit/base/PDB.py -> build/lib/tmkit/base
2023-06-19T23:37:30,314   copying tmkit/base/__init__.py -> build/lib/tmkit/base
2023-06-19T23:37:30,319   creating build/lib/tmkit/util
2023-06-19T23:37:30,321   copying tmkit/util/Kit.py -> build/lib/tmkit/util
2023-06-19T23:37:30,326   copying tmkit/util/Writer.py -> build/lib/tmkit/util
2023-06-19T23:37:30,330   copying tmkit/util/__init__.py -> build/lib/tmkit/util
2023-06-19T23:37:30,334   copying tmkit/util/Console.py -> build/lib/tmkit/util
2023-06-19T23:37:30,338   copying tmkit/util/Reader.py -> build/lib/tmkit/util
2023-06-19T23:37:30,344   creating build/lib/tmkit/name
2023-06-19T23:37:30,346   copying tmkit/name/Mapping.py -> build/lib/tmkit/name
2023-06-19T23:37:30,352   copying tmkit/name/__init__.py -> build/lib/tmkit/name
2023-06-19T23:37:30,357   creating build/lib/tmkit/chain
2023-06-19T23:37:30,359   copying tmkit/chain/Collate.py -> build/lib/tmkit/chain
2023-06-19T23:37:30,365   copying tmkit/chain/CollateBatch.py -> build/lib/tmkit/chain
2023-06-19T23:37:30,372   copying tmkit/chain/PDB.py -> build/lib/tmkit/chain
2023-06-19T23:37:30,376   copying tmkit/chain/__init__.py -> build/lib/tmkit/chain
2023-06-19T23:37:30,381   creating build/lib/tmkit/position
2023-06-19T23:37:30,384   copying tmkit/position/__init__.py -> build/lib/tmkit/position
2023-06-19T23:37:30,390   creating build/lib/tmkit/id
2023-06-19T23:37:30,393   copying tmkit/id/Fasta.py -> build/lib/tmkit/id
2023-06-19T23:37:30,398   copying tmkit/id/Mapping.py -> build/lib/tmkit/id
2023-06-19T23:37:30,402   copying tmkit/id/PDB.py -> build/lib/tmkit/id
2023-06-19T23:37:30,407   copying tmkit/id/__init__.py -> build/lib/tmkit/id
2023-06-19T23:37:30,414   creating build/lib/tmkit/structure
2023-06-19T23:37:30,417   copying tmkit/structure/PDB.py -> build/lib/tmkit/structure
2023-06-19T23:37:30,422   copying tmkit/structure/__init__.py -> build/lib/tmkit/structure
2023-06-19T23:37:30,427   creating build/lib/tmkit/topology
2023-06-19T23:37:30,430   copying tmkit/topology/Phobius.py -> build/lib/tmkit/topology
2023-06-19T23:37:30,435   copying tmkit/topology/TMHMM.py -> build/lib/tmkit/topology
2023-06-19T23:37:30,440   copying tmkit/topology/__init__.py -> build/lib/tmkit/topology
2023-06-19T23:37:30,446   creating build/lib/tmkit/interface
2023-06-19T23:37:30,448   copying tmkit/interface/Topology.py -> build/lib/tmkit/interface
2023-06-19T23:37:30,454   copying tmkit/interface/Tool.py -> build/lib/tmkit/interface
2023-06-19T23:37:30,459   copying tmkit/interface/__init__.py -> build/lib/tmkit/interface
2023-06-19T23:37:30,466   creating build/lib/tmkit/visualize
2023-06-19T23:37:30,468   copying tmkit/visualize/__init__.py -> build/lib/tmkit/visualize
2023-06-19T23:37:30,473   creating build/lib/tmkit/feature
2023-06-19T23:37:30,476   copying tmkit/feature/HelixSurface.py -> build/lib/tmkit/feature
2023-06-19T23:37:30,481   copying tmkit/feature/__init__.py -> build/lib/tmkit/feature
2023-06-19T23:37:30,487   creating build/lib/tmkit/seqnetrr
2023-06-19T23:37:30,490   copying tmkit/seqnetrr/Controller.py -> build/lib/tmkit/seqnetrr
2023-06-19T23:37:30,495   copying tmkit/seqnetrr/Plot.py -> build/lib/tmkit/seqnetrr
2023-06-19T23:37:30,500   copying tmkit/seqnetrr/__init__.py -> build/lib/tmkit/seqnetrr
2023-06-19T23:37:30,503   copying tmkit/seqnetrr/Compare.py -> build/lib/tmkit/seqnetrr
2023-06-19T23:37:30,508   copying tmkit/seqnetrr/Path.py -> build/lib/tmkit/seqnetrr
2023-06-19T23:37:30,513   creating build/lib/tmkit/sequence
2023-06-19T23:37:30,515   copying tmkit/sequence/Index.py -> build/lib/tmkit/sequence
2023-06-19T23:37:30,519   copying tmkit/sequence/XML.py -> build/lib/tmkit/sequence
2023-06-19T23:37:30,522   copying tmkit/sequence/Fasta.py -> build/lib/tmkit/sequence
2023-06-19T23:37:30,526   copying tmkit/sequence/PDB.py -> build/lib/tmkit/sequence
2023-06-19T23:37:30,529   copying tmkit/sequence/__init__.py -> build/lib/tmkit/sequence
2023-06-19T23:37:30,534   creating build/lib/tmkit/db
2023-06-19T23:37:30,536   copying tmkit/db/Connectivity.py -> build/lib/tmkit/db
2023-06-19T23:37:30,540   copying tmkit/db/__init__.py -> build/lib/tmkit/db
2023-06-19T23:37:30,543   copying tmkit/db/Reader.py -> build/lib/tmkit/db
2023-06-19T23:37:30,549   creating build/lib/tmkit/retrieve
2023-06-19T23:37:30,551   copying tmkit/retrieve/XML.py -> build/lib/tmkit/retrieve
2023-06-19T23:37:30,555   copying tmkit/retrieve/PDB.py -> build/lib/tmkit/retrieve
2023-06-19T23:37:30,559   copying tmkit/retrieve/__init__.py -> build/lib/tmkit/retrieve
2023-06-19T23:37:30,562   copying tmkit/retrieve/MSA.py -> build/lib/tmkit/retrieve
2023-06-19T23:37:30,568   creating build/lib/tmkit/position/scenario
2023-06-19T23:37:30,570   copying tmkit/position/scenario/Separation.py -> build/lib/tmkit/position/scenario
2023-06-19T23:37:30,574   copying tmkit/position/scenario/Segment.py -> build/lib/tmkit/position/scenario
2023-06-19T23:37:30,577   copying tmkit/position/scenario/__init__.py -> build/lib/tmkit/position/scenario
2023-06-19T23:37:30,582   creating build/lib/tmkit/structure/rrc
2023-06-19T23:37:30,583   copying tmkit/structure/rrc/__init__.py -> build/lib/tmkit/structure/rrc
2023-06-19T23:37:30,587   copying tmkit/structure/rrc/Label.py -> build/lib/tmkit/structure/rrc
2023-06-19T23:37:30,592   creating build/lib/tmkit/structure/ppi
2023-06-19T23:37:30,593   copying tmkit/structure/ppi/__init__.py -> build/lib/tmkit/structure/ppi
2023-06-19T23:37:30,597   copying tmkit/structure/ppi/Label.py -> build/lib/tmkit/structure/ppi
2023-06-19T23:37:30,602   creating build/lib/tmkit/topology/pdbtm
2023-06-19T23:37:30,604   copying tmkit/topology/pdbtm/Determine.py -> build/lib/tmkit/topology/pdbtm
2023-06-19T23:37:30,608   copying tmkit/topology/pdbtm/TMH.py -> build/lib/tmkit/topology/pdbtm
2023-06-19T23:37:30,612   copying tmkit/topology/pdbtm/Segment.py -> build/lib/tmkit/topology/pdbtm
2023-06-19T23:37:30,616   copying tmkit/topology/pdbtm/__init__.py -> build/lib/tmkit/topology/pdbtm
2023-06-19T23:37:30,619   copying tmkit/topology/pdbtm/Component.py -> build/lib/tmkit/topology/pdbtm
2023-06-19T23:37:30,623   copying tmkit/topology/pdbtm/ToFastaId.py -> build/lib/tmkit/topology/pdbtm
2023-06-19T23:37:30,628   creating build/lib/tmkit/topology/lib
2023-06-19T23:37:30,630   copying tmkit/topology/lib/Phobius.py -> build/lib/tmkit/topology/lib
2023-06-19T23:37:30,636   copying tmkit/topology/lib/__init__.py -> build/lib/tmkit/topology/lib
2023-06-19T23:37:30,640   creating build/lib/tmkit/visualize/func
2023-06-19T23:37:30,642   copying tmkit/visualize/func/Coloring.py -> build/lib/tmkit/visualize/func
2023-06-19T23:37:30,646   copying tmkit/visualize/func/__init__.py -> build/lib/tmkit/visualize/func
2023-06-19T23:37:30,651   creating build/lib/tmkit/visualize/small
2023-06-19T23:37:30,653   copying tmkit/visualize/small/Select.py -> build/lib/tmkit/visualize/small
2023-06-19T23:37:30,657   copying tmkit/visualize/small/Local.py -> build/lib/tmkit/visualize/small
2023-06-19T23:37:30,660   copying tmkit/visualize/small/__init__.py -> build/lib/tmkit/visualize/small
2023-06-19T23:37:30,664   copying tmkit/visualize/small/Label.py -> build/lib/tmkit/visualize/small
2023-06-19T23:37:30,667   copying tmkit/visualize/small/Style.py -> build/lib/tmkit/visualize/small
2023-06-19T23:37:30,671   copying tmkit/visualize/small/Palette.py -> build/lib/tmkit/visualize/small
2023-06-19T23:37:30,676   creating build/lib/tmkit/visualize/lib
2023-06-19T23:37:30,678   copying tmkit/visualize/lib/show_contacts.py -> build/lib/tmkit/visualize/lib
2023-06-19T23:37:30,684   copying tmkit/visualize/lib/Select.py -> build/lib/tmkit/visualize/lib
2023-06-19T23:37:30,687   copying tmkit/visualize/lib/focal_blur.py -> build/lib/tmkit/visualize/lib
2023-06-19T23:37:30,691   copying tmkit/visualize/lib/Color.py -> build/lib/tmkit/visualize/lib
2023-06-19T23:37:30,695   copying tmkit/visualize/lib/InterfaceResidues.py -> build/lib/tmkit/visualize/lib
2023-06-19T23:37:30,698   copying tmkit/visualize/lib/__init__.py -> build/lib/tmkit/visualize/lib
2023-06-19T23:37:30,703   creating build/lib/tmkit/visualize/isite
2023-06-19T23:37:30,705   copying tmkit/visualize/isite/Labelling.py -> build/lib/tmkit/visualize/isite
2023-06-19T23:37:30,709   copying tmkit/visualize/isite/ProtocolDeepTMInter.py -> build/lib/tmkit/visualize/isite
2023-06-19T23:37:30,713   copying tmkit/visualize/isite/__init__.py -> build/lib/tmkit/visualize/isite
2023-06-19T23:37:30,718   creating build/lib/tmkit/visualize/lib/palette
2023-06-19T23:37:30,720   copying tmkit/visualize/lib/palette/data2bfactor.py -> build/lib/tmkit/visualize/lib/palette
2023-06-19T23:37:30,724   copying tmkit/visualize/lib/palette/__init__.py -> build/lib/tmkit/visualize/lib/palette
2023-06-19T23:37:30,727   copying tmkit/visualize/lib/palette/spectrumany.py -> build/lib/tmkit/visualize/lib/palette
2023-06-19T23:37:30,732   creating build/lib/tmkit/feature/lips
2023-06-19T23:37:30,734   copying tmkit/feature/lips/__init__.py -> build/lib/tmkit/feature/lips
2023-06-19T23:37:30,739   creating build/lib/tmkit/seqnetrr/window
2023-06-19T23:37:30,740   copying tmkit/seqnetrr/window/Single.py -> build/lib/tmkit/seqnetrr/window
2023-06-19T23:37:30,745   copying tmkit/seqnetrr/window/Pair.py -> build/lib/tmkit/seqnetrr/window
2023-06-19T23:37:30,749   copying tmkit/seqnetrr/window/__init__.py -> build/lib/tmkit/seqnetrr/window
2023-06-19T23:37:30,754   creating build/lib/tmkit/seqnetrr/util
2023-06-19T23:37:30,756   copying tmkit/seqnetrr/util/ComputLib.py -> build/lib/tmkit/seqnetrr/util
2023-06-19T23:37:30,760   copying tmkit/seqnetrr/util/Writer.py -> build/lib/tmkit/seqnetrr/util
2023-06-19T23:37:30,764   copying tmkit/seqnetrr/util/__init__.py -> build/lib/tmkit/seqnetrr/util
2023-06-19T23:37:30,767   copying tmkit/seqnetrr/util/Console.py -> build/lib/tmkit/seqnetrr/util
2023-06-19T23:37:30,771   copying tmkit/seqnetrr/util/Reader.py -> build/lib/tmkit/seqnetrr/util
2023-06-19T23:37:30,776   creating build/lib/tmkit/seqnetrr/net
2023-06-19T23:37:30,778   copying tmkit/seqnetrr/net/__init__.py -> build/lib/tmkit/seqnetrr/net
2023-06-19T23:37:30,781   copying tmkit/seqnetrr/net/Reader.py -> build/lib/tmkit/seqnetrr/net
2023-06-19T23:37:30,788   creating build/lib/tmkit/seqnetrr/graph
2023-06-19T23:37:30,790   copying tmkit/seqnetrr/graph/Unipartite.py -> build/lib/tmkit/seqnetrr/graph
2023-06-19T23:37:30,796   copying tmkit/seqnetrr/graph/Bipartite.py -> build/lib/tmkit/seqnetrr/graph
2023-06-19T23:37:30,800   copying tmkit/seqnetrr/graph/__init__.py -> build/lib/tmkit/seqnetrr/graph
2023-06-19T23:37:30,803   copying tmkit/seqnetrr/graph/Cumulative.py -> build/lib/tmkit/seqnetrr/graph
2023-06-19T23:37:30,809   creating build/lib/tmkit/seqnetrr/sequence
2023-06-19T23:37:30,811   copying tmkit/seqnetrr/sequence/Fasta.py -> build/lib/tmkit/seqnetrr/sequence
2023-06-19T23:37:30,814   copying tmkit/seqnetrr/sequence/__init__.py -> build/lib/tmkit/seqnetrr/sequence
2023-06-19T23:37:30,819   creating build/lib/tmkit/seqnetrr/combo
2023-06-19T23:37:30,821   copying tmkit/seqnetrr/combo/Position.py -> build/lib/tmkit/seqnetrr/combo
2023-06-19T23:37:30,825   copying tmkit/seqnetrr/combo/Separation.py -> build/lib/tmkit/seqnetrr/combo
2023-06-19T23:37:30,829   copying tmkit/seqnetrr/combo/Param.py -> build/lib/tmkit/seqnetrr/combo
2023-06-19T23:37:30,833   copying tmkit/seqnetrr/combo/Length.py -> build/lib/tmkit/seqnetrr/combo
2023-06-19T23:37:30,836   copying tmkit/seqnetrr/combo/__init__.py -> build/lib/tmkit/seqnetrr/combo
2023-06-19T23:37:30,840   creating build/lib/tmkit/seqnetrr/window/base
2023-06-19T23:37:30,843   copying tmkit/seqnetrr/window/base/Single.py -> build/lib/tmkit/seqnetrr/window/base
2023-06-19T23:37:30,847   copying tmkit/seqnetrr/window/base/Pair.py -> build/lib/tmkit/seqnetrr/window/base
2023-06-19T23:37:30,850   copying tmkit/seqnetrr/window/base/__init__.py -> build/lib/tmkit/seqnetrr/window/base
2023-06-19T23:37:30,854   creating build/lib/tmkit/db/biogrid
2023-06-19T23:37:30,856   copying tmkit/db/biogrid/__init__.py -> build/lib/tmkit/db/biogrid
2023-06-19T23:37:30,859   copying tmkit/db/biogrid/Reader.py -> build/lib/tmkit/db/biogrid
2023-06-19T23:37:30,865   creating build/lib/tmkit/db/muthtp
2023-06-19T23:37:30,866   copying tmkit/db/muthtp/__init__.py -> build/lib/tmkit/db/muthtp
2023-06-19T23:37:30,870   copying tmkit/db/muthtp/Reader.py -> build/lib/tmkit/db/muthtp
2023-06-19T23:37:30,875   creating build/lib/tmkit/db/predmuthtp
2023-06-19T23:37:30,877   copying tmkit/db/predmuthtp/__init__.py -> build/lib/tmkit/db/predmuthtp
2023-06-19T23:37:30,880   copying tmkit/db/predmuthtp/Reader.py -> build/lib/tmkit/db/predmuthtp
2023-06-19T23:37:30,885   creating build/lib/tmkit/db/cath
2023-06-19T23:37:30,887   copying tmkit/db/cath/__init__.py -> build/lib/tmkit/db/cath
2023-06-19T23:37:30,890   copying tmkit/db/cath/Reader.py -> build/lib/tmkit/db/cath
2023-06-19T23:37:30,896   creating build/lib/tmkit/db/intact
2023-06-19T23:37:30,897   copying tmkit/db/intact/__init__.py -> build/lib/tmkit/db/intact
2023-06-19T23:37:30,901   copying tmkit/db/intact/Reader.py -> build/lib/tmkit/db/intact
2023-06-19T23:37:30,906   creating build/lib/tmkit/db/construct
2023-06-19T23:37:30,908   copying tmkit/db/construct/Network.py -> build/lib/tmkit/db/construct
2023-06-19T23:37:30,912   copying tmkit/db/construct/__init__.py -> build/lib/tmkit/db/construct
2023-06-19T23:37:30,915   running egg_info
2023-06-19T23:37:31,065   writing tmkit.egg-info/PKG-INFO
2023-06-19T23:37:31,069   writing dependency_links to tmkit.egg-info/dependency_links.txt
2023-06-19T23:37:31,074   writing requirements to tmkit.egg-info/requires.txt
2023-06-19T23:37:31,077   writing top-level names to tmkit.egg-info/top_level.txt
2023-06-19T23:37:31,201   reading manifest file 'tmkit.egg-info/SOURCES.txt'
2023-06-19T23:37:31,213   adding license file 'LICENSE'
2023-06-19T23:37:31,235   writing manifest file 'tmkit.egg-info/SOURCES.txt'
2023-06-19T23:37:31,371   /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-06-19T23:37:31,371   !!

2023-06-19T23:37:31,372           ********************************************************************************
2023-06-19T23:37:31,372           Please avoid running ``setup.py`` directly.
2023-06-19T23:37:31,373           Instead, use pypa/build, pypa/installer, pypa/build or
2023-06-19T23:37:31,373           other standards-based tools.

2023-06-19T23:37:31,374           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-06-19T23:37:31,374           ********************************************************************************

2023-06-19T23:37:31,375   !!
2023-06-19T23:37:31,375     self.initialize_options()
2023-06-19T23:37:31,439   installing to build/bdist.linux-armv7l/wheel
2023-06-19T23:37:31,440   running install
2023-06-19T23:37:31,501   running install_lib
2023-06-19T23:37:31,571   creating build/bdist.linux-armv7l
2023-06-19T23:37:31,573   creating build/bdist.linux-armv7l/wheel
2023-06-19T23:37:31,576   creating build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,579   creating build/bdist.linux-armv7l/wheel/tmkit/contact
2023-06-19T23:37:31,581   copying build/lib/tmkit/contact/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/contact
2023-06-19T23:37:31,585   copying build/lib/tmkit/contact/Evaluator.py -> build/bdist.linux-armv7l/wheel/tmkit/contact
2023-06-19T23:37:31,589   copying build/lib/tmkit/contact/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/contact
2023-06-19T23:37:31,595   creating build/bdist.linux-armv7l/wheel/tmkit/channel
2023-06-19T23:37:31,597   copying build/lib/tmkit/channel/Workbench.py -> build/bdist.linux-armv7l/wheel/tmkit/channel
2023-06-19T23:37:31,602   copying build/lib/tmkit/channel/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/channel
2023-06-19T23:37:31,606   creating build/bdist.linux-armv7l/wheel/tmkit/base
2023-06-19T23:37:31,608   copying build/lib/tmkit/base/Position.py -> build/bdist.linux-armv7l/wheel/tmkit/base
2023-06-19T23:37:31,612   copying build/lib/tmkit/base/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/base
2023-06-19T23:37:31,616   copying build/lib/tmkit/base/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/base
2023-06-19T23:37:31,620   copying build/lib/tmkit/msa.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,624   copying build/lib/tmkit/mut.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,628   copying build/lib/tmkit/collate.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,631   copying build/lib/tmkit/topo.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,637   creating build/bdist.linux-armv7l/wheel/tmkit/util
2023-06-19T23:37:31,639   copying build/lib/tmkit/util/Kit.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-06-19T23:37:31,643   copying build/lib/tmkit/util/Writer.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-06-19T23:37:31,646   copying build/lib/tmkit/util/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-06-19T23:37:31,649   copying build/lib/tmkit/util/Console.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-06-19T23:37:31,653   copying build/lib/tmkit/util/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-06-19T23:37:31,656   copying build/lib/tmkit/vs.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,663   creating build/bdist.linux-armv7l/wheel/tmkit/name
2023-06-19T23:37:31,664   copying build/lib/tmkit/name/Mapping.py -> build/bdist.linux-armv7l/wheel/tmkit/name
2023-06-19T23:37:31,669   copying build/lib/tmkit/name/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/name
2023-06-19T23:37:31,672   creating build/bdist.linux-armv7l/wheel/tmkit/chain
2023-06-19T23:37:31,674   copying build/lib/tmkit/chain/Collate.py -> build/bdist.linux-armv7l/wheel/tmkit/chain
2023-06-19T23:37:31,679   copying build/lib/tmkit/chain/CollateBatch.py -> build/bdist.linux-armv7l/wheel/tmkit/chain
2023-06-19T23:37:31,683   copying build/lib/tmkit/chain/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/chain
2023-06-19T23:37:31,687   copying build/lib/tmkit/chain/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/chain
2023-06-19T23:37:31,690   copying build/lib/tmkit/mapping.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,693   copying build/lib/tmkit/pl.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,696   copying build/lib/tmkit/rrc.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,700   copying build/lib/tmkit/seq.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,705   creating build/bdist.linux-armv7l/wheel/tmkit/position
2023-06-19T23:37:31,708   creating build/bdist.linux-armv7l/wheel/tmkit/position/scenario
2023-06-19T23:37:31,710   copying build/lib/tmkit/position/scenario/Separation.py -> build/bdist.linux-armv7l/wheel/tmkit/position/scenario
2023-06-19T23:37:31,715   copying build/lib/tmkit/position/scenario/Segment.py -> build/bdist.linux-armv7l/wheel/tmkit/position/scenario
2023-06-19T23:37:31,718   copying build/lib/tmkit/position/scenario/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/position/scenario
2023-06-19T23:37:31,721   copying build/lib/tmkit/position/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/position
2023-06-19T23:37:31,725   creating build/bdist.linux-armv7l/wheel/tmkit/id
2023-06-19T23:37:31,727   copying build/lib/tmkit/id/Fasta.py -> build/bdist.linux-armv7l/wheel/tmkit/id
2023-06-19T23:37:31,731   copying build/lib/tmkit/id/Mapping.py -> build/bdist.linux-armv7l/wheel/tmkit/id
2023-06-19T23:37:31,735   copying build/lib/tmkit/id/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/id
2023-06-19T23:37:31,738   copying build/lib/tmkit/id/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/id
2023-06-19T23:37:31,742   creating build/bdist.linux-armv7l/wheel/tmkit/structure
2023-06-19T23:37:31,744   copying build/lib/tmkit/structure/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/structure
2023-06-19T23:37:31,748   copying build/lib/tmkit/structure/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/structure
2023-06-19T23:37:31,752   creating build/bdist.linux-armv7l/wheel/tmkit/structure/rrc
2023-06-19T23:37:31,753   copying build/lib/tmkit/structure/rrc/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/structure/rrc
2023-06-19T23:37:31,756   copying build/lib/tmkit/structure/rrc/Label.py -> build/bdist.linux-armv7l/wheel/tmkit/structure/rrc
2023-06-19T23:37:31,761   creating build/bdist.linux-armv7l/wheel/tmkit/structure/ppi
2023-06-19T23:37:31,763   copying build/lib/tmkit/structure/ppi/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/structure/ppi
2023-06-19T23:37:31,766   copying build/lib/tmkit/structure/ppi/Label.py -> build/bdist.linux-armv7l/wheel/tmkit/structure/ppi
2023-06-19T23:37:31,770   creating build/bdist.linux-armv7l/wheel/tmkit/topology
2023-06-19T23:37:31,773   creating build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-06-19T23:37:31,775   copying build/lib/tmkit/topology/pdbtm/Determine.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-06-19T23:37:31,779   copying build/lib/tmkit/topology/pdbtm/TMH.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-06-19T23:37:31,782   copying build/lib/tmkit/topology/pdbtm/Segment.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-06-19T23:37:31,786   copying build/lib/tmkit/topology/pdbtm/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-06-19T23:37:31,788   copying build/lib/tmkit/topology/pdbtm/Component.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-06-19T23:37:31,793   copying build/lib/tmkit/topology/pdbtm/ToFastaId.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-06-19T23:37:31,797   creating build/bdist.linux-armv7l/wheel/tmkit/topology/lib
2023-06-19T23:37:31,799   copying build/lib/tmkit/topology/lib/Phobius.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/lib
2023-06-19T23:37:31,804   copying build/lib/tmkit/topology/lib/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/lib
2023-06-19T23:37:31,807   copying build/lib/tmkit/topology/Phobius.py -> build/bdist.linux-armv7l/wheel/tmkit/topology
2023-06-19T23:37:31,811   copying build/lib/tmkit/topology/TMHMM.py -> build/bdist.linux-armv7l/wheel/tmkit/topology
2023-06-19T23:37:31,815   copying build/lib/tmkit/topology/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/topology
2023-06-19T23:37:31,819   creating build/bdist.linux-armv7l/wheel/tmkit/interface
2023-06-19T23:37:31,820   copying build/lib/tmkit/interface/Topology.py -> build/bdist.linux-armv7l/wheel/tmkit/interface
2023-06-19T23:37:31,824   copying build/lib/tmkit/interface/Tool.py -> build/bdist.linux-armv7l/wheel/tmkit/interface
2023-06-19T23:37:31,827   copying build/lib/tmkit/interface/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/interface
2023-06-19T23:37:31,831   creating build/bdist.linux-armv7l/wheel/tmkit/visualize
2023-06-19T23:37:31,834   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/func
2023-06-19T23:37:31,835   copying build/lib/tmkit/visualize/func/Coloring.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/func
2023-06-19T23:37:31,839   copying build/lib/tmkit/visualize/func/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/func
2023-06-19T23:37:31,844   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-06-19T23:37:31,845   copying build/lib/tmkit/visualize/small/Select.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-06-19T23:37:31,849   copying build/lib/tmkit/visualize/small/Local.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-06-19T23:37:31,853   copying build/lib/tmkit/visualize/small/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-06-19T23:37:31,856   copying build/lib/tmkit/visualize/small/Label.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-06-19T23:37:31,860   copying build/lib/tmkit/visualize/small/Style.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-06-19T23:37:31,863   copying build/lib/tmkit/visualize/small/Palette.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-06-19T23:37:31,868   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/lib
2023-06-19T23:37:31,870   copying build/lib/tmkit/visualize/lib/show_contacts.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/lib
2023-06-19T23:37:31,874   copying build/lib/tmkit/visualize/lib/Select.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/lib
2023-06-19T23:37:31,878   copying build/lib/tmkit/visualize/lib/focal_blur.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/lib
2023-06-19T23:37:31,882   copying build/lib/tmkit/visualize/lib/Color.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/lib
2023-06-19T23:37:31,885   copying build/lib/tmkit/visualize/lib/InterfaceResidues.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/lib
2023-06-19T23:37:31,890   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/lib/palette
2023-06-19T23:37:31,892   copying build/lib/tmkit/visualize/lib/palette/data2bfactor.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/lib/palette
2023-06-19T23:37:31,897   copying build/lib/tmkit/visualize/lib/palette/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/lib/palette
2023-06-19T23:37:31,900   copying build/lib/tmkit/visualize/lib/palette/spectrumany.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/lib/palette
2023-06-19T23:37:31,903   copying build/lib/tmkit/visualize/lib/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/lib
2023-06-19T23:37:31,907   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/isite
2023-06-19T23:37:31,909   copying build/lib/tmkit/visualize/isite/Labelling.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/isite
2023-06-19T23:37:31,914   copying build/lib/tmkit/visualize/isite/ProtocolDeepTMInter.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/isite
2023-06-19T23:37:31,917   copying build/lib/tmkit/visualize/isite/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/isite
2023-06-19T23:37:31,921   copying build/lib/tmkit/visualize/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize
2023-06-19T23:37:31,924   copying build/lib/tmkit/cath.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,929   creating build/bdist.linux-armv7l/wheel/tmkit/feature
2023-06-19T23:37:31,931   creating build/bdist.linux-armv7l/wheel/tmkit/feature/lips
2023-06-19T23:37:31,933   copying build/lib/tmkit/feature/lips/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/feature/lips
2023-06-19T23:37:31,937   copying build/lib/tmkit/feature/HelixSurface.py -> build/bdist.linux-armv7l/wheel/tmkit/feature
2023-06-19T23:37:31,941   copying build/lib/tmkit/feature/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/feature
2023-06-19T23:37:31,944   copying build/lib/tmkit/feature.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:31,950   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-06-19T23:37:31,953   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window
2023-06-19T23:37:31,956   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window/base
2023-06-19T23:37:31,958   copying build/lib/tmkit/seqnetrr/window/base/Single.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window/base
2023-06-19T23:37:31,962   copying build/lib/tmkit/seqnetrr/window/base/Pair.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window/base
2023-06-19T23:37:31,966   copying build/lib/tmkit/seqnetrr/window/base/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window/base
2023-06-19T23:37:31,969   copying build/lib/tmkit/seqnetrr/window/Single.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window
2023-06-19T23:37:31,973   copying build/lib/tmkit/seqnetrr/window/Pair.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window
2023-06-19T23:37:31,978   copying build/lib/tmkit/seqnetrr/window/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window
2023-06-19T23:37:31,981   copying build/lib/tmkit/seqnetrr/Controller.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-06-19T23:37:31,987   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/util
2023-06-19T23:37:31,989   copying build/lib/tmkit/seqnetrr/util/ComputLib.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/util
2023-06-19T23:37:31,993   copying build/lib/tmkit/seqnetrr/util/Writer.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/util
2023-06-19T23:37:31,997   copying build/lib/tmkit/seqnetrr/util/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/util
2023-06-19T23:37:32,000   copying build/lib/tmkit/seqnetrr/util/Console.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/util
2023-06-19T23:37:32,004   copying build/lib/tmkit/seqnetrr/util/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/util
2023-06-19T23:37:32,008   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/net
2023-06-19T23:37:32,010   copying build/lib/tmkit/seqnetrr/net/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/net
2023-06-19T23:37:32,014   copying build/lib/tmkit/seqnetrr/net/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/net
2023-06-19T23:37:32,019   copying build/lib/tmkit/seqnetrr/Plot.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-06-19T23:37:32,026   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-06-19T23:37:32,028   copying build/lib/tmkit/seqnetrr/graph/Unipartite.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-06-19T23:37:32,034   copying build/lib/tmkit/seqnetrr/graph/Bipartite.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-06-19T23:37:32,039   copying build/lib/tmkit/seqnetrr/graph/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-06-19T23:37:32,042   copying build/lib/tmkit/seqnetrr/graph/Cumulative.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-06-19T23:37:32,046   copying build/lib/tmkit/seqnetrr/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-06-19T23:37:32,050   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/sequence
2023-06-19T23:37:32,052   copying build/lib/tmkit/seqnetrr/sequence/Fasta.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/sequence
2023-06-19T23:37:32,055   copying build/lib/tmkit/seqnetrr/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/sequence
2023-06-19T23:37:32,058   copying build/lib/tmkit/seqnetrr/Compare.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-06-19T23:37:32,063   copying build/lib/tmkit/seqnetrr/Path.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-06-19T23:37:32,067   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-06-19T23:37:32,069   copying build/lib/tmkit/seqnetrr/combo/Position.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-06-19T23:37:32,073   copying build/lib/tmkit/seqnetrr/combo/Separation.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-06-19T23:37:32,076   copying build/lib/tmkit/seqnetrr/combo/Param.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-06-19T23:37:32,079   copying build/lib/tmkit/seqnetrr/combo/Length.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-06-19T23:37:32,083   copying build/lib/tmkit/seqnetrr/combo/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-06-19T23:37:32,086   copying build/lib/tmkit/ppi.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:32,090   copying build/lib/tmkit/qc.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:32,094   copying build/lib/tmkit/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:32,099   creating build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-06-19T23:37:32,101   copying build/lib/tmkit/sequence/Index.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-06-19T23:37:32,105   copying build/lib/tmkit/sequence/XML.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-06-19T23:37:32,108   copying build/lib/tmkit/sequence/Fasta.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-06-19T23:37:32,112   copying build/lib/tmkit/sequence/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-06-19T23:37:32,115   copying build/lib/tmkit/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-06-19T23:37:32,119   creating build/bdist.linux-armv7l/wheel/tmkit/db
2023-06-19T23:37:32,122   creating build/bdist.linux-armv7l/wheel/tmkit/db/biogrid
2023-06-19T23:37:32,124   copying build/lib/tmkit/db/biogrid/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/biogrid
2023-06-19T23:37:32,127   copying build/lib/tmkit/db/biogrid/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/biogrid
2023-06-19T23:37:32,132   creating build/bdist.linux-armv7l/wheel/tmkit/db/muthtp
2023-06-19T23:37:32,133   copying build/lib/tmkit/db/muthtp/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/muthtp
2023-06-19T23:37:32,136   copying build/lib/tmkit/db/muthtp/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/muthtp
2023-06-19T23:37:32,141   creating build/bdist.linux-armv7l/wheel/tmkit/db/predmuthtp
2023-06-19T23:37:32,143   copying build/lib/tmkit/db/predmuthtp/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/predmuthtp
2023-06-19T23:37:32,146   copying build/lib/tmkit/db/predmuthtp/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/predmuthtp
2023-06-19T23:37:32,150   creating build/bdist.linux-armv7l/wheel/tmkit/db/cath
2023-06-19T23:37:32,152   copying build/lib/tmkit/db/cath/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/cath
2023-06-19T23:37:32,155   copying build/lib/tmkit/db/cath/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/cath
2023-06-19T23:37:32,159   copying build/lib/tmkit/db/Connectivity.py -> build/bdist.linux-armv7l/wheel/tmkit/db
2023-06-19T23:37:32,163   copying build/lib/tmkit/db/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db
2023-06-19T23:37:32,167   creating build/bdist.linux-armv7l/wheel/tmkit/db/intact
2023-06-19T23:37:32,169   copying build/lib/tmkit/db/intact/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/intact
2023-06-19T23:37:32,172   copying build/lib/tmkit/db/intact/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/intact
2023-06-19T23:37:32,176   copying build/lib/tmkit/db/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db
2023-06-19T23:37:32,180   creating build/bdist.linux-armv7l/wheel/tmkit/db/construct
2023-06-19T23:37:32,182   copying build/lib/tmkit/db/construct/Network.py -> build/bdist.linux-armv7l/wheel/tmkit/db/construct
2023-06-19T23:37:32,186   copying build/lib/tmkit/db/construct/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/construct
2023-06-19T23:37:32,189   copying build/lib/tmkit/SeqNetRR.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:32,193   copying build/lib/tmkit/Path.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:32,198   creating build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-06-19T23:37:32,200   copying build/lib/tmkit/retrieve/XML.py -> build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-06-19T23:37:32,205   copying build/lib/tmkit/retrieve/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-06-19T23:37:32,209   copying build/lib/tmkit/retrieve/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-06-19T23:37:32,212   copying build/lib/tmkit/retrieve/MSA.py -> build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-06-19T23:37:32,216   copying build/lib/tmkit/edge.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-06-19T23:37:32,219   running install_egg_info
2023-06-19T23:37:32,297   Copying tmkit.egg-info to build/bdist.linux-armv7l/wheel/tmkit-0.0.0.2-py3.7.egg-info
2023-06-19T23:37:32,316   running install_scripts
2023-06-19T23:37:32,349   creating build/bdist.linux-armv7l/wheel/tmkit-0.0.0.2.dist-info/WHEEL
2023-06-19T23:37:32,354   creating '/tmp/pip-wheel-9d6wsel9/tmkit-0.0.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-06-19T23:37:32,360   adding 'tmkit/Path.py'
2023-06-19T23:37:32,364   adding 'tmkit/SeqNetRR.py'
2023-06-19T23:37:32,366   adding 'tmkit/__init__.py'
2023-06-19T23:37:32,369   adding 'tmkit/cath.py'
2023-06-19T23:37:32,371   adding 'tmkit/collate.py'
2023-06-19T23:37:32,374   adding 'tmkit/edge.py'
2023-06-19T23:37:32,377   adding 'tmkit/feature.py'
2023-06-19T23:37:32,380   adding 'tmkit/mapping.py'
2023-06-19T23:37:32,384   adding 'tmkit/msa.py'
2023-06-19T23:37:32,386   adding 'tmkit/mut.py'
2023-06-19T23:37:32,389   adding 'tmkit/pl.py'
2023-06-19T23:37:32,392   adding 'tmkit/ppi.py'
2023-06-19T23:37:32,394   adding 'tmkit/qc.py'
2023-06-19T23:37:32,397   adding 'tmkit/rrc.py'
2023-06-19T23:37:32,400   adding 'tmkit/seq.py'
2023-06-19T23:37:32,404   adding 'tmkit/topo.py'
2023-06-19T23:37:32,407   adding 'tmkit/vs.py'
2023-06-19T23:37:32,411   adding 'tmkit/base/PDB.py'
2023-06-19T23:37:32,413   adding 'tmkit/base/Position.py'
2023-06-19T23:37:32,416   adding 'tmkit/base/__init__.py'
2023-06-19T23:37:32,420   adding 'tmkit/chain/Collate.py'
2023-06-19T23:37:32,423   adding 'tmkit/chain/CollateBatch.py'
2023-06-19T23:37:32,426   adding 'tmkit/chain/PDB.py'
2023-06-19T23:37:32,428   adding 'tmkit/chain/__init__.py'
2023-06-19T23:37:32,433   adding 'tmkit/channel/Workbench.py'
2023-06-19T23:37:32,435   adding 'tmkit/channel/__init__.py'
2023-06-19T23:37:32,440   adding 'tmkit/contact/Evaluator.py'
2023-06-19T23:37:32,445   adding 'tmkit/contact/Reader.py'
2023-06-19T23:37:32,448   adding 'tmkit/contact/__init__.py'
2023-06-19T23:37:32,452   adding 'tmkit/db/Connectivity.py'
2023-06-19T23:37:32,455   adding 'tmkit/db/Reader.py'
2023-06-19T23:37:32,458   adding 'tmkit/db/__init__.py'
2023-06-19T23:37:32,462   adding 'tmkit/db/biogrid/Reader.py'
2023-06-19T23:37:32,464   adding 'tmkit/db/biogrid/__init__.py'
2023-06-19T23:37:32,468   adding 'tmkit/db/cath/Reader.py'
2023-06-19T23:37:32,471   adding 'tmkit/db/cath/__init__.py'
2023-06-19T23:37:32,474   adding 'tmkit/db/construct/Network.py'
2023-06-19T23:37:32,477   adding 'tmkit/db/construct/__init__.py'
2023-06-19T23:37:32,480   adding 'tmkit/db/intact/Reader.py'
2023-06-19T23:37:32,483   adding 'tmkit/db/intact/__init__.py'
2023-06-19T23:37:32,487   adding 'tmkit/db/muthtp/Reader.py'
2023-06-19T23:37:32,489   adding 'tmkit/db/muthtp/__init__.py'
2023-06-19T23:37:32,493   adding 'tmkit/db/predmuthtp/Reader.py'
2023-06-19T23:37:32,495   adding 'tmkit/db/predmuthtp/__init__.py'
2023-06-19T23:37:32,499   adding 'tmkit/feature/HelixSurface.py'
2023-06-19T23:37:32,502   adding 'tmkit/feature/__init__.py'
2023-06-19T23:37:32,505   adding 'tmkit/feature/lips/__init__.py'
2023-06-19T23:37:32,509   adding 'tmkit/id/Fasta.py'
2023-06-19T23:37:32,512   adding 'tmkit/id/Mapping.py'
2023-06-19T23:37:32,514   adding 'tmkit/id/PDB.py'
2023-06-19T23:37:32,517   adding 'tmkit/id/__init__.py'
2023-06-19T23:37:32,520   adding 'tmkit/interface/Tool.py'
2023-06-19T23:37:32,522   adding 'tmkit/interface/Topology.py'
2023-06-19T23:37:32,525   adding 'tmkit/interface/__init__.py'
2023-06-19T23:37:32,529   adding 'tmkit/name/Mapping.py'
2023-06-19T23:37:32,531   adding 'tmkit/name/__init__.py'
2023-06-19T23:37:32,534   adding 'tmkit/position/__init__.py'
2023-06-19T23:37:32,538   adding 'tmkit/position/scenario/Segment.py'
2023-06-19T23:37:32,540   adding 'tmkit/position/scenario/Separation.py'
2023-06-19T23:37:32,543   adding 'tmkit/position/scenario/__init__.py'
2023-06-19T23:37:32,548   adding 'tmkit/retrieve/MSA.py'
2023-06-19T23:37:32,552   adding 'tmkit/retrieve/PDB.py'
2023-06-19T23:37:32,554   adding 'tmkit/retrieve/XML.py'
2023-06-19T23:37:32,557   adding 'tmkit/retrieve/__init__.py'
2023-06-19T23:37:32,562   adding 'tmkit/seqnetrr/Compare.py'
2023-06-19T23:37:32,566   adding 'tmkit/seqnetrr/Controller.py'
2023-06-19T23:37:32,569   adding 'tmkit/seqnetrr/Path.py'
2023-06-19T23:37:32,575   adding 'tmkit/seqnetrr/Plot.py'
2023-06-19T23:37:32,578   adding 'tmkit/seqnetrr/__init__.py'
2023-06-19T23:37:32,582   adding 'tmkit/seqnetrr/combo/Length.py'
2023-06-19T23:37:32,585   adding 'tmkit/seqnetrr/combo/Param.py'
2023-06-19T23:37:32,587   adding 'tmkit/seqnetrr/combo/Position.py'
2023-06-19T23:37:32,590   adding 'tmkit/seqnetrr/combo/Separation.py'
2023-06-19T23:37:32,592   adding 'tmkit/seqnetrr/combo/__init__.py'
2023-06-19T23:37:32,598   adding 'tmkit/seqnetrr/graph/Bipartite.py'
2023-06-19T23:37:32,602   adding 'tmkit/seqnetrr/graph/Cumulative.py'
2023-06-19T23:37:32,607   adding 'tmkit/seqnetrr/graph/Unipartite.py'
2023-06-19T23:37:32,610   adding 'tmkit/seqnetrr/graph/__init__.py'
2023-06-19T23:37:32,615   adding 'tmkit/seqnetrr/net/Reader.py'
2023-06-19T23:37:32,618   adding 'tmkit/seqnetrr/net/__init__.py'
2023-06-19T23:37:32,622   adding 'tmkit/seqnetrr/sequence/Fasta.py'
2023-06-19T23:37:32,624   adding 'tmkit/seqnetrr/sequence/__init__.py'
2023-06-19T23:37:32,628   adding 'tmkit/seqnetrr/util/ComputLib.py'
2023-06-19T23:37:32,631   adding 'tmkit/seqnetrr/util/Console.py'
2023-06-19T23:37:32,634   adding 'tmkit/seqnetrr/util/Reader.py'
2023-06-19T23:37:32,637   adding 'tmkit/seqnetrr/util/Writer.py'
2023-06-19T23:37:32,639   adding 'tmkit/seqnetrr/util/__init__.py'
2023-06-19T23:37:32,643   adding 'tmkit/seqnetrr/window/Pair.py'
2023-06-19T23:37:32,646   adding 'tmkit/seqnetrr/window/Single.py'
2023-06-19T23:37:32,649   adding 'tmkit/seqnetrr/window/__init__.py'
2023-06-19T23:37:32,652   adding 'tmkit/seqnetrr/window/base/Pair.py'
2023-06-19T23:37:32,655   adding 'tmkit/seqnetrr/window/base/Single.py'
2023-06-19T23:37:32,657   adding 'tmkit/seqnetrr/window/base/__init__.py'
2023-06-19T23:37:32,661   adding 'tmkit/sequence/Fasta.py'
2023-06-19T23:37:32,663   adding 'tmkit/sequence/Index.py'
2023-06-19T23:37:32,666   adding 'tmkit/sequence/PDB.py'
2023-06-19T23:37:32,668   adding 'tmkit/sequence/XML.py'
2023-06-19T23:37:32,670   adding 'tmkit/sequence/__init__.py'
2023-06-19T23:37:32,674   adding 'tmkit/structure/PDB.py'
2023-06-19T23:37:32,676   adding 'tmkit/structure/__init__.py'
2023-06-19T23:37:32,680   adding 'tmkit/structure/ppi/Label.py'
2023-06-19T23:37:32,682   adding 'tmkit/structure/ppi/__init__.py'
2023-06-19T23:37:32,686   adding 'tmkit/structure/rrc/Label.py'
2023-06-19T23:37:32,688   adding 'tmkit/structure/rrc/__init__.py'
2023-06-19T23:37:32,693   adding 'tmkit/topology/Phobius.py'
2023-06-19T23:37:32,696   adding 'tmkit/topology/TMHMM.py'
2023-06-19T23:37:32,699   adding 'tmkit/topology/__init__.py'
2023-06-19T23:37:32,707   adding 'tmkit/topology/lib/Phobius.py'
2023-06-19T23:37:32,710   adding 'tmkit/topology/lib/__init__.py'
2023-06-19T23:37:32,714   adding 'tmkit/topology/pdbtm/Component.py'
2023-06-19T23:37:32,716   adding 'tmkit/topology/pdbtm/Determine.py'
2023-06-19T23:37:32,719   adding 'tmkit/topology/pdbtm/Segment.py'
2023-06-19T23:37:32,722   adding 'tmkit/topology/pdbtm/TMH.py'
2023-06-19T23:37:32,725   adding 'tmkit/topology/pdbtm/ToFastaId.py'
2023-06-19T23:37:32,727   adding 'tmkit/topology/pdbtm/__init__.py'
2023-06-19T23:37:32,731   adding 'tmkit/util/Console.py'
2023-06-19T23:37:32,734   adding 'tmkit/util/Kit.py'
2023-06-19T23:37:32,736   adding 'tmkit/util/Reader.py'
2023-06-19T23:37:32,739   adding 'tmkit/util/Writer.py'
2023-06-19T23:37:32,741   adding 'tmkit/util/__init__.py'
2023-06-19T23:37:32,744   adding 'tmkit/visualize/__init__.py'
2023-06-19T23:37:32,748   adding 'tmkit/visualize/func/Coloring.py'
2023-06-19T23:37:32,750   adding 'tmkit/visualize/func/__init__.py'
2023-06-19T23:37:32,754   adding 'tmkit/visualize/isite/Labelling.py'
2023-06-19T23:37:32,757   adding 'tmkit/visualize/isite/ProtocolDeepTMInter.py'
2023-06-19T23:37:32,760   adding 'tmkit/visualize/isite/__init__.py'
2023-06-19T23:37:32,764   adding 'tmkit/visualize/lib/Color.py'
2023-06-19T23:37:32,767   adding 'tmkit/visualize/lib/InterfaceResidues.py'
2023-06-19T23:37:32,769   adding 'tmkit/visualize/lib/Select.py'
2023-06-19T23:37:32,772   adding 'tmkit/visualize/lib/__init__.py'
2023-06-19T23:37:32,774   adding 'tmkit/visualize/lib/focal_blur.py'
2023-06-19T23:37:32,779   adding 'tmkit/visualize/lib/show_contacts.py'
2023-06-19T23:37:32,783   adding 'tmkit/visualize/lib/palette/__init__.py'
2023-06-19T23:37:32,786   adding 'tmkit/visualize/lib/palette/data2bfactor.py'
2023-06-19T23:37:32,790   adding 'tmkit/visualize/lib/palette/spectrumany.py'
2023-06-19T23:37:32,794   adding 'tmkit/visualize/small/Label.py'
2023-06-19T23:37:32,796   adding 'tmkit/visualize/small/Local.py'
2023-06-19T23:37:32,799   adding 'tmkit/visualize/small/Palette.py'
2023-06-19T23:37:32,802   adding 'tmkit/visualize/small/Select.py'
2023-06-19T23:37:32,804   adding 'tmkit/visualize/small/Style.py'
2023-06-19T23:37:32,807   adding 'tmkit/visualize/small/__init__.py'
2023-06-19T23:37:32,824   adding 'tmkit-0.0.0.2.dist-info/LICENSE'
2023-06-19T23:37:32,827   adding 'tmkit-0.0.0.2.dist-info/METADATA'
2023-06-19T23:37:32,828   adding 'tmkit-0.0.0.2.dist-info/WHEEL'
2023-06-19T23:37:32,830   adding 'tmkit-0.0.0.2.dist-info/top_level.txt'
2023-06-19T23:37:32,836   adding 'tmkit-0.0.0.2.dist-info/RECORD'
2023-06-19T23:37:32,848   removing build/bdist.linux-armv7l/wheel
2023-06-19T23:37:33,097   Building wheel for tmkit (setup.py): finished with status 'done'
2023-06-19T23:37:33,109   Created wheel for tmkit: filename=tmkit-0.0.0.2-py3-none-any.whl size=145197 sha256=d7e6179471e55a22dc665fe9a5407d31c8e102c507996fd76892cc1d791f996a
2023-06-19T23:37:33,111   Stored in directory: /tmp/pip-ephem-wheel-cache-n3n4jyda/wheels/bf/78/10/13331150ff22657630a18026cad85543e6a1da6745b5cb8767
2023-06-19T23:37:33,150 Successfully built tmkit
2023-06-19T23:37:33,168 Removed build tracker: '/tmp/pip-build-tracker-6errtal8'