2023-07-10T00:18:49,549 Created temporary directory: /tmp/pip-build-tracker-quq3d9ab
2023-07-10T00:18:49,550 Initialized build tracking at /tmp/pip-build-tracker-quq3d9ab
2023-07-10T00:18:49,551 Created build tracker: /tmp/pip-build-tracker-quq3d9ab
2023-07-10T00:18:49,551 Entered build tracker: /tmp/pip-build-tracker-quq3d9ab
2023-07-10T00:18:49,551 Created temporary directory: /tmp/pip-wheel-stp_cui9
2023-07-10T00:18:49,554 Created temporary directory: /tmp/pip-ephem-wheel-cache-djr6k6mc
2023-07-10T00:18:49,581 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-07-10T00:18:49,584 2 location(s) to search for versions of tmkit:
2023-07-10T00:18:49,584 * https://pypi.org/simple/tmkit/
2023-07-10T00:18:49,584 * https://www.piwheels.org/simple/tmkit/
2023-07-10T00:18:49,584 Fetching project page and analyzing links: https://pypi.org/simple/tmkit/
2023-07-10T00:18:49,585 Getting page https://pypi.org/simple/tmkit/
2023-07-10T00:18:49,586 Found index url https://pypi.org/simple/
2023-07-10T00:18:49,639 Fetched page https://pypi.org/simple/tmkit/ as application/vnd.pypi.simple.v1+json
2023-07-10T00:18:49,641   Found link https://files.pythonhosted.org/packages/8d/e1/852206283668df1fa41bf4b2fde871294fb7f7c0ab96003a2e57c44f2f96/tmkit-0.0.0.1.tar.gz (from https://pypi.org/simple/tmkit/) (requires-python:>3.6), version: 0.0.0.1
2023-07-10T00:18:49,641   Found link https://files.pythonhosted.org/packages/e8/b5/c614baeefa3355b746c9a45dca41220164c7699f2b25e29ef9b8b7974f63/tmkit-0.0.0.2.tar.gz (from https://pypi.org/simple/tmkit/) (requires-python:>3.6), version: 0.0.0.2
2023-07-10T00:18:49,642   Found link https://files.pythonhosted.org/packages/27/04/5019dcf9444984a56fa0e9f6374f30477bd892a7988513c885aa74423539/tmkit-0.0.2.tar.gz (from https://pypi.org/simple/tmkit/) (requires-python:>3.8), version: 0.0.2
2023-07-10T00:18:49,642   Found link https://files.pythonhosted.org/packages/10/ab/6c32e46eb22143dc9871ff17e2639e25463b524bb734c26afd9a0f6fb7bb/tmkit-0.0.3.tar.gz (from https://pypi.org/simple/tmkit/) (requires-python:>3.8), version: 0.0.3
2023-07-10T00:18:49,643 Fetching project page and analyzing links: https://www.piwheels.org/simple/tmkit/
2023-07-10T00:18:49,643 Getting page https://www.piwheels.org/simple/tmkit/
2023-07-10T00:18:49,644 Found index url https://www.piwheels.org/simple/
2023-07-10T00:18:49,804 Fetched page https://www.piwheels.org/simple/tmkit/ as text/html
2023-07-10T00:18:49,806   Skipping link: No binaries permitted for tmkit: https://www.piwheels.org/simple/tmkit/tmkit-0.0.2-py3-none-any.whl#sha256=e9570dcb44cf21c503f94f0464d510763378998415ff598bdc645f1799475869 (from https://www.piwheels.org/simple/tmkit/) (requires-python:>3.8)
2023-07-10T00:18:49,806   Skipping link: No binaries permitted for tmkit: https://www.piwheels.org/simple/tmkit/tmkit-0.0.0.2-py3-none-any.whl#sha256=d7e6179471e55a22dc665fe9a5407d31c8e102c507996fd76892cc1d791f996a (from https://www.piwheels.org/simple/tmkit/) (requires-python:>3.6)
2023-07-10T00:18:49,807   Skipping link: No binaries permitted for tmkit: https://www.piwheels.org/simple/tmkit/tmkit-0.0.0.1-py3-none-any.whl#sha256=a5891fde2a97efa09786197998df6fe66aa6250ea901fb3f62b267b0192ab116 (from https://www.piwheels.org/simple/tmkit/) (requires-python:>3.6)
2023-07-10T00:18:49,807 Skipping link: not a file: https://www.piwheels.org/simple/tmkit/
2023-07-10T00:18:49,807 Skipping link: not a file: https://pypi.org/simple/tmkit/
2023-07-10T00:18:49,825 Given no hashes to check 1 links for project 'tmkit': discarding no candidates
2023-07-10T00:18:49,841 Collecting tmkit==0.0.3
2023-07-10T00:18:49,844   Created temporary directory: /tmp/pip-unpack-i7rv9wdb
2023-07-10T00:18:50,055   Downloading tmkit-0.0.3.tar.gz (120 kB)
2023-07-10T00:18:50,436   Added tmkit==0.0.3 from https://files.pythonhosted.org/packages/10/ab/6c32e46eb22143dc9871ff17e2639e25463b524bb734c26afd9a0f6fb7bb/tmkit-0.0.3.tar.gz to build tracker '/tmp/pip-build-tracker-quq3d9ab'
2023-07-10T00:18:50,441   Created temporary directory: /tmp/pip-build-env-ec0bkbyy
2023-07-10T00:18:50,451   Installing build dependencies: started
2023-07-10T00:18:50,452   Running command pip subprocess to install build dependencies
2023-07-10T00:18:51,636   Using pip 23.1.2 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9)
2023-07-10T00:18:52,001   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-07-10T00:18:53,697   Collecting setuptools>=40.8.0
2023-07-10T00:18:53,762     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.0.0-py3-none-any.whl (804 kB)
2023-07-10T00:18:54,021   Collecting wheel
2023-07-10T00:18:54,041     Using cached https://www.piwheels.org/simple/wheel/wheel-0.40.0-py3-none-any.whl (64 kB)
2023-07-10T00:18:55,856   Installing collected packages: wheel, setuptools
2023-07-10T00:18:56,081     Creating /tmp/pip-build-env-ec0bkbyy/overlay/bin
2023-07-10T00:18:56,083     changing mode of /tmp/pip-build-env-ec0bkbyy/overlay/bin/wheel to 755
2023-07-10T00:18:58,154   Successfully installed setuptools-68.0.0 wheel-0.40.0
2023-07-10T00:18:58,413   Installing build dependencies: finished with status 'done'
2023-07-10T00:18:58,418   Getting requirements to build wheel: started
2023-07-10T00:18:58,419   Running command Getting requirements to build wheel
2023-07-10T00:18:58,950   Warning: 'keywords' should be a list, got type 'tuple'
2023-07-10T00:18:59,007   running egg_info
2023-07-10T00:18:59,012   writing tmkit.egg-info/PKG-INFO
2023-07-10T00:18:59,014   writing dependency_links to tmkit.egg-info/dependency_links.txt
2023-07-10T00:18:59,016   writing requirements to tmkit.egg-info/requires.txt
2023-07-10T00:18:59,017   writing top-level names to tmkit.egg-info/top_level.txt
2023-07-10T00:18:59,082   reading manifest file 'tmkit.egg-info/SOURCES.txt'
2023-07-10T00:18:59,087   adding license file 'LICENSE'
2023-07-10T00:18:59,096   writing manifest file 'tmkit.egg-info/SOURCES.txt'
2023-07-10T00:18:59,158   Getting requirements to build wheel: finished with status 'done'
2023-07-10T00:18:59,167   Created temporary directory: /tmp/pip-modern-metadata-ltftq3_b
2023-07-10T00:18:59,170   Preparing metadata (pyproject.toml): started
2023-07-10T00:18:59,171   Running command Preparing metadata (pyproject.toml)
2023-07-10T00:18:59,645   Warning: 'keywords' should be a list, got type 'tuple'
2023-07-10T00:18:59,692   running dist_info
2023-07-10T00:18:59,710   creating /tmp/pip-modern-metadata-ltftq3_b/tmkit.egg-info
2023-07-10T00:18:59,715   writing /tmp/pip-modern-metadata-ltftq3_b/tmkit.egg-info/PKG-INFO
2023-07-10T00:18:59,717   writing dependency_links to /tmp/pip-modern-metadata-ltftq3_b/tmkit.egg-info/dependency_links.txt
2023-07-10T00:18:59,719   writing requirements to /tmp/pip-modern-metadata-ltftq3_b/tmkit.egg-info/requires.txt
2023-07-10T00:18:59,720   writing top-level names to /tmp/pip-modern-metadata-ltftq3_b/tmkit.egg-info/top_level.txt
2023-07-10T00:18:59,722   writing manifest file '/tmp/pip-modern-metadata-ltftq3_b/tmkit.egg-info/SOURCES.txt'
2023-07-10T00:18:59,783   reading manifest file '/tmp/pip-modern-metadata-ltftq3_b/tmkit.egg-info/SOURCES.txt'
2023-07-10T00:18:59,786   adding license file 'LICENSE'
2023-07-10T00:18:59,792   writing manifest file '/tmp/pip-modern-metadata-ltftq3_b/tmkit.egg-info/SOURCES.txt'
2023-07-10T00:18:59,794   creating '/tmp/pip-modern-metadata-ltftq3_b/tmkit-0.0.3.dist-info'
2023-07-10T00:18:59,958   Preparing metadata (pyproject.toml): finished with status 'done'
2023-07-10T00:18:59,964   Source in /tmp/pip-wheel-stp_cui9/tmkit_a1d77b7bc927453ba2e93cd201ed2bc0 has version 0.0.3, which satisfies requirement tmkit==0.0.3 from https://files.pythonhosted.org/packages/10/ab/6c32e46eb22143dc9871ff17e2639e25463b524bb734c26afd9a0f6fb7bb/tmkit-0.0.3.tar.gz
2023-07-10T00:18:59,965   Removed tmkit==0.0.3 from https://files.pythonhosted.org/packages/10/ab/6c32e46eb22143dc9871ff17e2639e25463b524bb734c26afd9a0f6fb7bb/tmkit-0.0.3.tar.gz from build tracker '/tmp/pip-build-tracker-quq3d9ab'
2023-07-10T00:18:59,971 Created temporary directory: /tmp/pip-unpack-lupai075
2023-07-10T00:18:59,972 Building wheels for collected packages: tmkit
2023-07-10T00:18:59,976   Created temporary directory: /tmp/pip-wheel-llj1kcev
2023-07-10T00:18:59,977   Destination directory: /tmp/pip-wheel-llj1kcev
2023-07-10T00:18:59,979   Building wheel for tmkit (pyproject.toml): started
2023-07-10T00:18:59,980   Running command Building wheel for tmkit (pyproject.toml)
2023-07-10T00:19:00,442   Warning: 'keywords' should be a list, got type 'tuple'
2023-07-10T00:19:00,538   running bdist_wheel
2023-07-10T00:19:00,571   running build
2023-07-10T00:19:00,571   running build_py
2023-07-10T00:19:00,579   creating build
2023-07-10T00:19:00,580   creating build/lib
2023-07-10T00:19:00,581   creating build/lib/tests
2023-07-10T00:19:00,582   copying tests/cath_test.py -> build/lib/tests
2023-07-10T00:19:00,583   copying tests/mapping_test.py -> build/lib/tests
2023-07-10T00:19:00,585   copying tests/residue_contact_test.py -> build/lib/tests
2023-07-10T00:19:00,586   copying tests/topology_test.py -> build/lib/tests
2023-07-10T00:19:00,588   copying tests/__init__.py -> build/lib/tests
2023-07-10T00:19:00,589   copying tests/feature_test.py -> build/lib/tests
2023-07-10T00:19:00,591   copying tests/conftest.py -> build/lib/tests
2023-07-10T00:19:00,592   copying tests/mutation_test.py -> build/lib/tests
2023-07-10T00:19:00,594   copying tests/collation_test.py -> build/lib/tests
2023-07-10T00:19:00,595   copying tests/sequence_test.py -> build/lib/tests
2023-07-10T00:19:00,598   creating build/lib/tmkit
2023-07-10T00:19:00,599   copying tmkit/collate.py -> build/lib/tmkit
2023-07-10T00:19:00,601   copying tmkit/mut.py -> build/lib/tmkit
2023-07-10T00:19:00,603   copying tmkit/fetch.py -> build/lib/tmkit
2023-07-10T00:19:00,605   copying tmkit/vs.py -> build/lib/tmkit
2023-07-10T00:19:00,606   copying tmkit/topo.py -> build/lib/tmkit
2023-07-10T00:19:00,608   copying tmkit/mapping.py -> build/lib/tmkit
2023-07-10T00:19:00,610   copying tmkit/cath.py -> build/lib/tmkit
2023-07-10T00:19:00,611   copying tmkit/seq.py -> build/lib/tmkit
2023-07-10T00:19:00,613   copying tmkit/msa.py -> build/lib/tmkit
2023-07-10T00:19:00,615   copying tmkit/ppi.py -> build/lib/tmkit
2023-07-10T00:19:00,617   copying tmkit/__init__.py -> build/lib/tmkit
2023-07-10T00:19:00,619   copying tmkit/edge.py -> build/lib/tmkit
2023-07-10T00:19:00,620   copying tmkit/feature.py -> build/lib/tmkit
2023-07-10T00:19:00,622   copying tmkit/rrc.py -> build/lib/tmkit
2023-07-10T00:19:00,624   copying tmkit/Path.py -> build/lib/tmkit
2023-07-10T00:19:00,626   copying tmkit/__main__.py -> build/lib/tmkit
2023-07-10T00:19:00,627   copying tmkit/qc.py -> build/lib/tmkit
2023-07-10T00:19:00,629   creating build/lib/tmkit/db
2023-07-10T00:19:00,630   copying tmkit/db/__init__.py -> build/lib/tmkit/db
2023-07-10T00:19:00,631   copying tmkit/db/Connectivity.py -> build/lib/tmkit/db
2023-07-10T00:19:00,633   copying tmkit/db/Reader.py -> build/lib/tmkit/db
2023-07-10T00:19:00,636   creating build/lib/tmkit/structure
2023-07-10T00:19:00,636   copying tmkit/structure/PDB.py -> build/lib/tmkit/structure
2023-07-10T00:19:00,638   copying tmkit/structure/__init__.py -> build/lib/tmkit/structure
2023-07-10T00:19:00,640   creating build/lib/tmkit/interface
2023-07-10T00:19:00,641   copying tmkit/interface/Topology.py -> build/lib/tmkit/interface
2023-07-10T00:19:00,642   copying tmkit/interface/Tool.py -> build/lib/tmkit/interface
2023-07-10T00:19:00,644   copying tmkit/interface/__init__.py -> build/lib/tmkit/interface
2023-07-10T00:19:00,646   creating build/lib/tmkit/topology
2023-07-10T00:19:00,646   copying tmkit/topology/Phobius.py -> build/lib/tmkit/topology
2023-07-10T00:19:00,648   copying tmkit/topology/TMHMM.py -> build/lib/tmkit/topology
2023-07-10T00:19:00,650   copying tmkit/topology/__init__.py -> build/lib/tmkit/topology
2023-07-10T00:19:00,652   creating build/lib/tmkit/util
2023-07-10T00:19:00,653   copying tmkit/util/Kit.py -> build/lib/tmkit/util
2023-07-10T00:19:00,655   copying tmkit/util/__init__.py -> build/lib/tmkit/util
2023-07-10T00:19:00,657   copying tmkit/util/Console.py -> build/lib/tmkit/util
2023-07-10T00:19:00,658   copying tmkit/util/Writer.py -> build/lib/tmkit/util
2023-07-10T00:19:00,660   copying tmkit/util/Reader.py -> build/lib/tmkit/util
2023-07-10T00:19:00,663   creating build/lib/tmkit/id
2023-07-10T00:19:00,664   copying tmkit/id/Fasta.py -> build/lib/tmkit/id
2023-07-10T00:19:00,665   copying tmkit/id/PDB.py -> build/lib/tmkit/id
2023-07-10T00:19:00,667   copying tmkit/id/Mapping.py -> build/lib/tmkit/id
2023-07-10T00:19:00,669   copying tmkit/id/__init__.py -> build/lib/tmkit/id
2023-07-10T00:19:00,671   creating build/lib/tmkit/contact
2023-07-10T00:19:00,672   copying tmkit/contact/Evaluator.py -> build/lib/tmkit/contact
2023-07-10T00:19:00,674   copying tmkit/contact/__init__.py -> build/lib/tmkit/contact
2023-07-10T00:19:00,676   copying tmkit/contact/Reader.py -> build/lib/tmkit/contact
2023-07-10T00:19:00,679   creating build/lib/tmkit/position
2023-07-10T00:19:00,680   copying tmkit/position/__init__.py -> build/lib/tmkit/position
2023-07-10T00:19:00,682   creating build/lib/tmkit/name
2023-07-10T00:19:00,682   copying tmkit/name/Mapping.py -> build/lib/tmkit/name
2023-07-10T00:19:00,684   copying tmkit/name/__init__.py -> build/lib/tmkit/name
2023-07-10T00:19:00,686   creating build/lib/tmkit/visualize
2023-07-10T00:19:00,687   copying tmkit/visualize/__init__.py -> build/lib/tmkit/visualize
2023-07-10T00:19:00,689   creating build/lib/tmkit/seqnetrr
2023-07-10T00:19:00,690   copying tmkit/seqnetrr/Controller.py -> build/lib/tmkit/seqnetrr
2023-07-10T00:19:00,692   copying tmkit/seqnetrr/Compare.py -> build/lib/tmkit/seqnetrr
2023-07-10T00:19:00,694   copying tmkit/seqnetrr/ComputLib.py -> build/lib/tmkit/seqnetrr
2023-07-10T00:19:00,695   copying tmkit/seqnetrr/__init__.py -> build/lib/tmkit/seqnetrr
2023-07-10T00:19:00,697   creating build/lib/tmkit/base
2023-07-10T00:19:00,698   copying tmkit/base/PDB.py -> build/lib/tmkit/base
2023-07-10T00:19:00,700   copying tmkit/base/__init__.py -> build/lib/tmkit/base
2023-07-10T00:19:00,701   copying tmkit/base/Position.py -> build/lib/tmkit/base
2023-07-10T00:19:00,703   creating build/lib/tmkit/property
2023-07-10T00:19:00,704   copying tmkit/property/HelixSurface.py -> build/lib/tmkit/property
2023-07-10T00:19:00,706   copying tmkit/property/__init__.py -> build/lib/tmkit/property
2023-07-10T00:19:00,708   creating build/lib/tmkit/sequence
2023-07-10T00:19:00,709   copying tmkit/sequence/Fasta.py -> build/lib/tmkit/sequence
2023-07-10T00:19:00,711   copying tmkit/sequence/Index.py -> build/lib/tmkit/sequence
2023-07-10T00:19:00,712   copying tmkit/sequence/PDB.py -> build/lib/tmkit/sequence
2023-07-10T00:19:00,714   copying tmkit/sequence/XML.py -> build/lib/tmkit/sequence
2023-07-10T00:19:00,716   copying tmkit/sequence/__init__.py -> build/lib/tmkit/sequence
2023-07-10T00:19:00,717   creating build/lib/tmkit/channel
2023-07-10T00:19:00,718   copying tmkit/channel/Workbench.py -> build/lib/tmkit/channel
2023-07-10T00:19:00,720   copying tmkit/channel/__init__.py -> build/lib/tmkit/channel
2023-07-10T00:19:00,722   creating build/lib/tmkit/retrieve
2023-07-10T00:19:00,723   copying tmkit/retrieve/PDB.py -> build/lib/tmkit/retrieve
2023-07-10T00:19:00,725   copying tmkit/retrieve/MSA.py -> build/lib/tmkit/retrieve
2023-07-10T00:19:00,727   copying tmkit/retrieve/XML.py -> build/lib/tmkit/retrieve
2023-07-10T00:19:00,729   copying tmkit/retrieve/__init__.py -> build/lib/tmkit/retrieve
2023-07-10T00:19:00,731   creating build/lib/tmkit/chain
2023-07-10T00:19:00,731   copying tmkit/chain/PDB.py -> build/lib/tmkit/chain
2023-07-10T00:19:00,733   copying tmkit/chain/Collate.py -> build/lib/tmkit/chain
2023-07-10T00:19:00,735   copying tmkit/chain/__init__.py -> build/lib/tmkit/chain
2023-07-10T00:19:00,736   copying tmkit/chain/CollateBatch.py -> build/lib/tmkit/chain
2023-07-10T00:19:00,739   creating build/lib/tmkit/db/construct
2023-07-10T00:19:00,740   copying tmkit/db/construct/Network.py -> build/lib/tmkit/db/construct
2023-07-10T00:19:00,741   copying tmkit/db/construct/__init__.py -> build/lib/tmkit/db/construct
2023-07-10T00:19:00,743   creating build/lib/tmkit/db/predmuthtp
2023-07-10T00:19:00,744   copying tmkit/db/predmuthtp/__init__.py -> build/lib/tmkit/db/predmuthtp
2023-07-10T00:19:00,745   copying tmkit/db/predmuthtp/Reader.py -> build/lib/tmkit/db/predmuthtp
2023-07-10T00:19:00,747   creating build/lib/tmkit/db/muthtp
2023-07-10T00:19:00,748   copying tmkit/db/muthtp/__init__.py -> build/lib/tmkit/db/muthtp
2023-07-10T00:19:00,749   copying tmkit/db/muthtp/Reader.py -> build/lib/tmkit/db/muthtp
2023-07-10T00:19:00,752   creating build/lib/tmkit/db/intact
2023-07-10T00:19:00,753   copying tmkit/db/intact/__init__.py -> build/lib/tmkit/db/intact
2023-07-10T00:19:00,754   copying tmkit/db/intact/Reader.py -> build/lib/tmkit/db/intact
2023-07-10T00:19:00,756   creating build/lib/tmkit/db/cath
2023-07-10T00:19:00,757   copying tmkit/db/cath/__init__.py -> build/lib/tmkit/db/cath
2023-07-10T00:19:00,759   copying tmkit/db/cath/Reader.py -> build/lib/tmkit/db/cath
2023-07-10T00:19:00,761   creating build/lib/tmkit/db/biogrid
2023-07-10T00:19:00,762   copying tmkit/db/biogrid/__init__.py -> build/lib/tmkit/db/biogrid
2023-07-10T00:19:00,763   copying tmkit/db/biogrid/Reader.py -> build/lib/tmkit/db/biogrid
2023-07-10T00:19:00,765   creating build/lib/tmkit/structure/ppi
2023-07-10T00:19:00,766   copying tmkit/structure/ppi/Label.py -> build/lib/tmkit/structure/ppi
2023-07-10T00:19:00,768   copying tmkit/structure/ppi/__init__.py -> build/lib/tmkit/structure/ppi
2023-07-10T00:19:00,770   creating build/lib/tmkit/structure/rrc
2023-07-10T00:19:00,771   copying tmkit/structure/rrc/Label.py -> build/lib/tmkit/structure/rrc
2023-07-10T00:19:00,772   copying tmkit/structure/rrc/__init__.py -> build/lib/tmkit/structure/rrc
2023-07-10T00:19:00,774   creating build/lib/tmkit/topology/pdbtm
2023-07-10T00:19:00,775   copying tmkit/topology/pdbtm/ToFastaId.py -> build/lib/tmkit/topology/pdbtm
2023-07-10T00:19:00,777   copying tmkit/topology/pdbtm/Segment.py -> build/lib/tmkit/topology/pdbtm
2023-07-10T00:19:00,779   copying tmkit/topology/pdbtm/Component.py -> build/lib/tmkit/topology/pdbtm
2023-07-10T00:19:00,781   copying tmkit/topology/pdbtm/TMH.py -> build/lib/tmkit/topology/pdbtm
2023-07-10T00:19:00,782   copying tmkit/topology/pdbtm/__init__.py -> build/lib/tmkit/topology/pdbtm
2023-07-10T00:19:00,784   copying tmkit/topology/pdbtm/Determine.py -> build/lib/tmkit/topology/pdbtm
2023-07-10T00:19:00,786   creating build/lib/tmkit/topology/lib
2023-07-10T00:19:00,786   copying tmkit/topology/lib/Phobius.py -> build/lib/tmkit/topology/lib
2023-07-10T00:19:00,789   copying tmkit/topology/lib/__init__.py -> build/lib/tmkit/topology/lib
2023-07-10T00:19:00,791   creating build/lib/tmkit/position/scenario
2023-07-10T00:19:00,791   copying tmkit/position/scenario/Segment.py -> build/lib/tmkit/position/scenario
2023-07-10T00:19:00,793   copying tmkit/position/scenario/__init__.py -> build/lib/tmkit/position/scenario
2023-07-10T00:19:00,794   copying tmkit/position/scenario/Separation.py -> build/lib/tmkit/position/scenario
2023-07-10T00:19:00,797   creating build/lib/tmkit/visualize/component
2023-07-10T00:19:00,797   copying tmkit/visualize/component/show_contacts.py -> build/lib/tmkit/visualize/component
2023-07-10T00:19:00,800   copying tmkit/visualize/component/Select.py -> build/lib/tmkit/visualize/component
2023-07-10T00:19:00,801   copying tmkit/visualize/component/Color.py -> build/lib/tmkit/visualize/component
2023-07-10T00:19:00,803   copying tmkit/visualize/component/__init__.py -> build/lib/tmkit/visualize/component
2023-07-10T00:19:00,804   copying tmkit/visualize/component/InterfaceResidues.py -> build/lib/tmkit/visualize/component
2023-07-10T00:19:00,806   copying tmkit/visualize/component/focal_blur.py -> build/lib/tmkit/visualize/component
2023-07-10T00:19:00,808   creating build/lib/tmkit/visualize/isite
2023-07-10T00:19:00,809   copying tmkit/visualize/isite/Labelling.py -> build/lib/tmkit/visualize/isite
2023-07-10T00:19:00,811   copying tmkit/visualize/isite/ProtocolDeepTMInter.py -> build/lib/tmkit/visualize/isite
2023-07-10T00:19:00,813   copying tmkit/visualize/isite/__init__.py -> build/lib/tmkit/visualize/isite
2023-07-10T00:19:00,815   creating build/lib/tmkit/visualize/small
2023-07-10T00:19:00,815   copying tmkit/visualize/small/Style.py -> build/lib/tmkit/visualize/small
2023-07-10T00:19:00,817   copying tmkit/visualize/small/Select.py -> build/lib/tmkit/visualize/small
2023-07-10T00:19:00,819   copying tmkit/visualize/small/Label.py -> build/lib/tmkit/visualize/small
2023-07-10T00:19:00,820   copying tmkit/visualize/small/__init__.py -> build/lib/tmkit/visualize/small
2023-07-10T00:19:00,821   copying tmkit/visualize/small/Palette.py -> build/lib/tmkit/visualize/small
2023-07-10T00:19:00,823   copying tmkit/visualize/small/Local.py -> build/lib/tmkit/visualize/small
2023-07-10T00:19:00,825   creating build/lib/tmkit/visualize/func
2023-07-10T00:19:00,826   copying tmkit/visualize/func/Coloring.py -> build/lib/tmkit/visualize/func
2023-07-10T00:19:00,827   copying tmkit/visualize/func/__init__.py -> build/lib/tmkit/visualize/func
2023-07-10T00:19:00,829   creating build/lib/tmkit/visualize/component/palette
2023-07-10T00:19:00,830   copying tmkit/visualize/component/palette/spectrumany.py -> build/lib/tmkit/visualize/component/palette
2023-07-10T00:19:00,832   copying tmkit/visualize/component/palette/__init__.py -> build/lib/tmkit/visualize/component/palette
2023-07-10T00:19:00,833   copying tmkit/visualize/component/palette/data2bfactor.py -> build/lib/tmkit/visualize/component/palette
2023-07-10T00:19:00,836   creating build/lib/tmkit/seqnetrr/net
2023-07-10T00:19:00,837   copying tmkit/seqnetrr/net/__init__.py -> build/lib/tmkit/seqnetrr/net
2023-07-10T00:19:00,838   copying tmkit/seqnetrr/net/Reader.py -> build/lib/tmkit/seqnetrr/net
2023-07-10T00:19:00,841   creating build/lib/tmkit/seqnetrr/combo
2023-07-10T00:19:00,842   copying tmkit/seqnetrr/combo/Length.py -> build/lib/tmkit/seqnetrr/combo
2023-07-10T00:19:00,843   copying tmkit/seqnetrr/combo/__init__.py -> build/lib/tmkit/seqnetrr/combo
2023-07-10T00:19:00,845   copying tmkit/seqnetrr/combo/Param.py -> build/lib/tmkit/seqnetrr/combo
2023-07-10T00:19:00,846   copying tmkit/seqnetrr/combo/Separation.py -> build/lib/tmkit/seqnetrr/combo
2023-07-10T00:19:00,848   copying tmkit/seqnetrr/combo/Position.py -> build/lib/tmkit/seqnetrr/combo
2023-07-10T00:19:00,851   creating build/lib/tmkit/seqnetrr/graph
2023-07-10T00:19:00,852   copying tmkit/seqnetrr/graph/__init__.py -> build/lib/tmkit/seqnetrr/graph
2023-07-10T00:19:00,853   copying tmkit/seqnetrr/graph/Bipartite.py -> build/lib/tmkit/seqnetrr/graph
2023-07-10T00:19:00,856   copying tmkit/seqnetrr/graph/Cumulative.py -> build/lib/tmkit/seqnetrr/graph
2023-07-10T00:19:00,858   copying tmkit/seqnetrr/graph/Unipartite.py -> build/lib/tmkit/seqnetrr/graph
2023-07-10T00:19:00,861   creating build/lib/tmkit/seqnetrr/window
2023-07-10T00:19:00,861   copying tmkit/seqnetrr/window/__init__.py -> build/lib/tmkit/seqnetrr/window
2023-07-10T00:19:00,863   copying tmkit/seqnetrr/window/Pair.py -> build/lib/tmkit/seqnetrr/window
2023-07-10T00:19:00,865   copying tmkit/seqnetrr/window/Single.py -> build/lib/tmkit/seqnetrr/window
2023-07-10T00:19:00,867   creating build/lib/tmkit/seqnetrr/window/base
2023-07-10T00:19:00,868   copying tmkit/seqnetrr/window/base/__init__.py -> build/lib/tmkit/seqnetrr/window/base
2023-07-10T00:19:00,869   copying tmkit/seqnetrr/window/base/Pair.py -> build/lib/tmkit/seqnetrr/window/base
2023-07-10T00:19:00,871   copying tmkit/seqnetrr/window/base/Single.py -> build/lib/tmkit/seqnetrr/window/base
2023-07-10T00:19:00,873   running egg_info
2023-07-10T00:19:00,891   writing tmkit.egg-info/PKG-INFO
2023-07-10T00:19:00,893   writing dependency_links to tmkit.egg-info/dependency_links.txt
2023-07-10T00:19:00,894   writing requirements to tmkit.egg-info/requires.txt
2023-07-10T00:19:00,895   writing top-level names to tmkit.egg-info/top_level.txt
2023-07-10T00:19:00,936   reading manifest file 'tmkit.egg-info/SOURCES.txt'
2023-07-10T00:19:00,941   adding license file 'LICENSE'
2023-07-10T00:19:00,949   writing manifest file 'tmkit.egg-info/SOURCES.txt'
2023-07-10T00:19:00,969   copying tmkit/.env -> build/lib/tmkit
2023-07-10T00:19:00,971   copying tmkit/property/lips.pl -> build/lib/tmkit/property
2023-07-10T00:19:01,008   installing to build/bdist.linux-armv7l/wheel
2023-07-10T00:19:01,008   running install
2023-07-10T00:19:01,033   running install_lib
2023-07-10T00:19:01,040   creating build/bdist.linux-armv7l
2023-07-10T00:19:01,040   creating build/bdist.linux-armv7l/wheel
2023-07-10T00:19:01,042   creating build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,043   copying build/lib/tests/cath_test.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,045   copying build/lib/tests/mapping_test.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,047   copying build/lib/tests/residue_contact_test.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,048   copying build/lib/tests/topology_test.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,050   copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,052   copying build/lib/tests/feature_test.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,054   copying build/lib/tests/conftest.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,055   copying build/lib/tests/mutation_test.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,057   copying build/lib/tests/collation_test.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,058   copying build/lib/tests/sequence_test.py -> build/bdist.linux-armv7l/wheel/tests
2023-07-10T00:19:01,061   creating build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,062   copying build/lib/tmkit/collate.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,064   copying build/lib/tmkit/mut.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,066   copying build/lib/tmkit/fetch.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,068   creating build/bdist.linux-armv7l/wheel/tmkit/db
2023-07-10T00:19:01,070   creating build/bdist.linux-armv7l/wheel/tmkit/db/construct
2023-07-10T00:19:01,071   copying build/lib/tmkit/db/construct/Network.py -> build/bdist.linux-armv7l/wheel/tmkit/db/construct
2023-07-10T00:19:01,073   copying build/lib/tmkit/db/construct/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/construct
2023-07-10T00:19:01,075   creating build/bdist.linux-armv7l/wheel/tmkit/db/predmuthtp
2023-07-10T00:19:01,076   copying build/lib/tmkit/db/predmuthtp/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/predmuthtp
2023-07-10T00:19:01,077   copying build/lib/tmkit/db/predmuthtp/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/predmuthtp
2023-07-10T00:19:01,080   creating build/bdist.linux-armv7l/wheel/tmkit/db/muthtp
2023-07-10T00:19:01,081   copying build/lib/tmkit/db/muthtp/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/muthtp
2023-07-10T00:19:01,082   copying build/lib/tmkit/db/muthtp/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/muthtp
2023-07-10T00:19:01,085   creating build/bdist.linux-armv7l/wheel/tmkit/db/intact
2023-07-10T00:19:01,086   copying build/lib/tmkit/db/intact/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/intact
2023-07-10T00:19:01,087   copying build/lib/tmkit/db/intact/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/intact
2023-07-10T00:19:01,090   creating build/bdist.linux-armv7l/wheel/tmkit/db/cath
2023-07-10T00:19:01,090   copying build/lib/tmkit/db/cath/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/cath
2023-07-10T00:19:01,092   copying build/lib/tmkit/db/cath/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/cath
2023-07-10T00:19:01,094   copying build/lib/tmkit/db/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db
2023-07-10T00:19:01,096   copying build/lib/tmkit/db/Connectivity.py -> build/bdist.linux-armv7l/wheel/tmkit/db
2023-07-10T00:19:01,098   creating build/bdist.linux-armv7l/wheel/tmkit/db/biogrid
2023-07-10T00:19:01,099   copying build/lib/tmkit/db/biogrid/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/db/biogrid
2023-07-10T00:19:01,101   copying build/lib/tmkit/db/biogrid/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db/biogrid
2023-07-10T00:19:01,103   copying build/lib/tmkit/db/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/db
2023-07-10T00:19:01,106   creating build/bdist.linux-armv7l/wheel/tmkit/structure
2023-07-10T00:19:01,106   copying build/lib/tmkit/structure/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/structure
2023-07-10T00:19:01,108   copying build/lib/tmkit/structure/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/structure
2023-07-10T00:19:01,110   creating build/bdist.linux-armv7l/wheel/tmkit/structure/ppi
2023-07-10T00:19:01,111   copying build/lib/tmkit/structure/ppi/Label.py -> build/bdist.linux-armv7l/wheel/tmkit/structure/ppi
2023-07-10T00:19:01,113   copying build/lib/tmkit/structure/ppi/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/structure/ppi
2023-07-10T00:19:01,115   creating build/bdist.linux-armv7l/wheel/tmkit/structure/rrc
2023-07-10T00:19:01,116   copying build/lib/tmkit/structure/rrc/Label.py -> build/bdist.linux-armv7l/wheel/tmkit/structure/rrc
2023-07-10T00:19:01,118   copying build/lib/tmkit/structure/rrc/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/structure/rrc
2023-07-10T00:19:01,120   creating build/bdist.linux-armv7l/wheel/tmkit/interface
2023-07-10T00:19:01,120   copying build/lib/tmkit/interface/Topology.py -> build/bdist.linux-armv7l/wheel/tmkit/interface
2023-07-10T00:19:01,122   copying build/lib/tmkit/interface/Tool.py -> build/bdist.linux-armv7l/wheel/tmkit/interface
2023-07-10T00:19:01,124   copying build/lib/tmkit/interface/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/interface
2023-07-10T00:19:01,125   copying build/lib/tmkit/vs.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,128   creating build/bdist.linux-armv7l/wheel/tmkit/topology
2023-07-10T00:19:01,129   copying build/lib/tmkit/topology/Phobius.py -> build/bdist.linux-armv7l/wheel/tmkit/topology
2023-07-10T00:19:01,132   creating build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-07-10T00:19:01,132   copying build/lib/tmkit/topology/pdbtm/ToFastaId.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-07-10T00:19:01,134   copying build/lib/tmkit/topology/pdbtm/Segment.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-07-10T00:19:01,137   copying build/lib/tmkit/topology/pdbtm/Component.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-07-10T00:19:01,139   copying build/lib/tmkit/topology/pdbtm/TMH.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-07-10T00:19:01,141   copying build/lib/tmkit/topology/pdbtm/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-07-10T00:19:01,143   copying build/lib/tmkit/topology/pdbtm/Determine.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/pdbtm
2023-07-10T00:19:01,145   copying build/lib/tmkit/topology/TMHMM.py -> build/bdist.linux-armv7l/wheel/tmkit/topology
2023-07-10T00:19:01,148   copying build/lib/tmkit/topology/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/topology
2023-07-10T00:19:01,150   creating build/bdist.linux-armv7l/wheel/tmkit/topology/lib
2023-07-10T00:19:01,151   copying build/lib/tmkit/topology/lib/Phobius.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/lib
2023-07-10T00:19:01,154   copying build/lib/tmkit/topology/lib/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/topology/lib
2023-07-10T00:19:01,156   creating build/bdist.linux-armv7l/wheel/tmkit/util
2023-07-10T00:19:01,157   copying build/lib/tmkit/util/Kit.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-07-10T00:19:01,160   copying build/lib/tmkit/util/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-07-10T00:19:01,162   copying build/lib/tmkit/util/Console.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-07-10T00:19:01,164   copying build/lib/tmkit/util/Writer.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-07-10T00:19:01,166   copying build/lib/tmkit/util/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/util
2023-07-10T00:19:01,169   copying build/lib/tmkit/topo.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,172   creating build/bdist.linux-armv7l/wheel/tmkit/id
2023-07-10T00:19:01,173   copying build/lib/tmkit/id/Fasta.py -> build/bdist.linux-armv7l/wheel/tmkit/id
2023-07-10T00:19:01,175   copying build/lib/tmkit/id/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/id
2023-07-10T00:19:01,177   copying build/lib/tmkit/id/Mapping.py -> build/bdist.linux-armv7l/wheel/tmkit/id
2023-07-10T00:19:01,179   copying build/lib/tmkit/id/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/id
2023-07-10T00:19:01,181   creating build/bdist.linux-armv7l/wheel/tmkit/contact
2023-07-10T00:19:01,182   copying build/lib/tmkit/contact/Evaluator.py -> build/bdist.linux-armv7l/wheel/tmkit/contact
2023-07-10T00:19:01,185   copying build/lib/tmkit/contact/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/contact
2023-07-10T00:19:01,186   copying build/lib/tmkit/contact/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/contact
2023-07-10T00:19:01,189   copying build/lib/tmkit/mapping.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,191   copying build/lib/tmkit/cath.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,194   creating build/bdist.linux-armv7l/wheel/tmkit/position
2023-07-10T00:19:01,195   creating build/bdist.linux-armv7l/wheel/tmkit/position/scenario
2023-07-10T00:19:01,197   copying build/lib/tmkit/position/scenario/Segment.py -> build/bdist.linux-armv7l/wheel/tmkit/position/scenario
2023-07-10T00:19:01,199   copying build/lib/tmkit/position/scenario/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/position/scenario
2023-07-10T00:19:01,200   copying build/lib/tmkit/position/scenario/Separation.py -> build/bdist.linux-armv7l/wheel/tmkit/position/scenario
2023-07-10T00:19:01,203   copying build/lib/tmkit/position/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/position
2023-07-10T00:19:01,205   copying build/lib/tmkit/seq.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,208   copying build/lib/tmkit/.env -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,212   creating build/bdist.linux-armv7l/wheel/tmkit/name
2023-07-10T00:19:01,213   copying build/lib/tmkit/name/Mapping.py -> build/bdist.linux-armv7l/wheel/tmkit/name
2023-07-10T00:19:01,215   copying build/lib/tmkit/name/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/name
2023-07-10T00:19:01,217   creating build/bdist.linux-armv7l/wheel/tmkit/visualize
2023-07-10T00:19:01,219   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/component
2023-07-10T00:19:01,220   copying build/lib/tmkit/visualize/component/show_contacts.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/component
2023-07-10T00:19:01,223   copying build/lib/tmkit/visualize/component/Select.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/component
2023-07-10T00:19:01,225   copying build/lib/tmkit/visualize/component/Color.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/component
2023-07-10T00:19:01,227   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/component/palette
2023-07-10T00:19:01,228   copying build/lib/tmkit/visualize/component/palette/spectrumany.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/component/palette
2023-07-10T00:19:01,231   copying build/lib/tmkit/visualize/component/palette/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/component/palette
2023-07-10T00:19:01,232   copying build/lib/tmkit/visualize/component/palette/data2bfactor.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/component/palette
2023-07-10T00:19:01,235   copying build/lib/tmkit/visualize/component/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/component
2023-07-10T00:19:01,236   copying build/lib/tmkit/visualize/component/InterfaceResidues.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/component
2023-07-10T00:19:01,239   copying build/lib/tmkit/visualize/component/focal_blur.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/component
2023-07-10T00:19:01,241   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/isite
2023-07-10T00:19:01,242   copying build/lib/tmkit/visualize/isite/Labelling.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/isite
2023-07-10T00:19:01,244   copying build/lib/tmkit/visualize/isite/ProtocolDeepTMInter.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/isite
2023-07-10T00:19:01,247   copying build/lib/tmkit/visualize/isite/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/isite
2023-07-10T00:19:01,249   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-07-10T00:19:01,250   copying build/lib/tmkit/visualize/small/Style.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-07-10T00:19:01,252   copying build/lib/tmkit/visualize/small/Select.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-07-10T00:19:01,254   copying build/lib/tmkit/visualize/small/Label.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-07-10T00:19:01,256   copying build/lib/tmkit/visualize/small/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-07-10T00:19:01,257   copying build/lib/tmkit/visualize/small/Palette.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-07-10T00:19:01,259   copying build/lib/tmkit/visualize/small/Local.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/small
2023-07-10T00:19:01,261   copying build/lib/tmkit/visualize/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize
2023-07-10T00:19:01,263   creating build/bdist.linux-armv7l/wheel/tmkit/visualize/func
2023-07-10T00:19:01,264   copying build/lib/tmkit/visualize/func/Coloring.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/func
2023-07-10T00:19:01,266   copying build/lib/tmkit/visualize/func/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/visualize/func
2023-07-10T00:19:01,268   copying build/lib/tmkit/msa.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,270   copying build/lib/tmkit/ppi.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,273   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-07-10T00:19:01,274   copying build/lib/tmkit/seqnetrr/Controller.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-07-10T00:19:01,277   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/net
2023-07-10T00:19:01,278   copying build/lib/tmkit/seqnetrr/net/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/net
2023-07-10T00:19:01,280   copying build/lib/tmkit/seqnetrr/net/Reader.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/net
2023-07-10T00:19:01,283   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-07-10T00:19:01,285   copying build/lib/tmkit/seqnetrr/combo/Length.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-07-10T00:19:01,287   copying build/lib/tmkit/seqnetrr/combo/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-07-10T00:19:01,288   copying build/lib/tmkit/seqnetrr/combo/Param.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-07-10T00:19:01,290   copying build/lib/tmkit/seqnetrr/combo/Separation.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-07-10T00:19:01,293   copying build/lib/tmkit/seqnetrr/combo/Position.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/combo
2023-07-10T00:19:01,295   copying build/lib/tmkit/seqnetrr/Compare.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-07-10T00:19:01,297   copying build/lib/tmkit/seqnetrr/ComputLib.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-07-10T00:19:01,299   copying build/lib/tmkit/seqnetrr/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr
2023-07-10T00:19:01,301   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-07-10T00:19:01,302   copying build/lib/tmkit/seqnetrr/graph/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-07-10T00:19:01,304   copying build/lib/tmkit/seqnetrr/graph/Bipartite.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-07-10T00:19:01,307   copying build/lib/tmkit/seqnetrr/graph/Cumulative.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-07-10T00:19:01,309   copying build/lib/tmkit/seqnetrr/graph/Unipartite.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/graph
2023-07-10T00:19:01,312   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window
2023-07-10T00:19:01,314   copying build/lib/tmkit/seqnetrr/window/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window
2023-07-10T00:19:01,316   creating build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window/base
2023-07-10T00:19:01,317   copying build/lib/tmkit/seqnetrr/window/base/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window/base
2023-07-10T00:19:01,318   copying build/lib/tmkit/seqnetrr/window/base/Pair.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window/base
2023-07-10T00:19:01,320   copying build/lib/tmkit/seqnetrr/window/base/Single.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window/base
2023-07-10T00:19:01,322   copying build/lib/tmkit/seqnetrr/window/Pair.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window
2023-07-10T00:19:01,325   copying build/lib/tmkit/seqnetrr/window/Single.py -> build/bdist.linux-armv7l/wheel/tmkit/seqnetrr/window
2023-07-10T00:19:01,327   copying build/lib/tmkit/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,329   copying build/lib/tmkit/edge.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,332   creating build/bdist.linux-armv7l/wheel/tmkit/base
2023-07-10T00:19:01,333   copying build/lib/tmkit/base/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/base
2023-07-10T00:19:01,335   copying build/lib/tmkit/base/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/base
2023-07-10T00:19:01,337   copying build/lib/tmkit/base/Position.py -> build/bdist.linux-armv7l/wheel/tmkit/base
2023-07-10T00:19:01,339   copying build/lib/tmkit/feature.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,341   copying build/lib/tmkit/rrc.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,344   copying build/lib/tmkit/Path.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,346   copying build/lib/tmkit/__main__.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,348   creating build/bdist.linux-armv7l/wheel/tmkit/property
2023-07-10T00:19:01,349   copying build/lib/tmkit/property/lips.pl -> build/bdist.linux-armv7l/wheel/tmkit/property
2023-07-10T00:19:01,352   copying build/lib/tmkit/property/HelixSurface.py -> build/bdist.linux-armv7l/wheel/tmkit/property
2023-07-10T00:19:01,354   copying build/lib/tmkit/property/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/property
2023-07-10T00:19:01,356   creating build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-07-10T00:19:01,358   copying build/lib/tmkit/sequence/Fasta.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-07-10T00:19:01,360   copying build/lib/tmkit/sequence/Index.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-07-10T00:19:01,361   copying build/lib/tmkit/sequence/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-07-10T00:19:01,364   copying build/lib/tmkit/sequence/XML.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-07-10T00:19:01,365   copying build/lib/tmkit/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/sequence
2023-07-10T00:19:01,367   creating build/bdist.linux-armv7l/wheel/tmkit/channel
2023-07-10T00:19:01,369   copying build/lib/tmkit/channel/Workbench.py -> build/bdist.linux-armv7l/wheel/tmkit/channel
2023-07-10T00:19:01,371   copying build/lib/tmkit/channel/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/channel
2023-07-10T00:19:01,373   copying build/lib/tmkit/qc.py -> build/bdist.linux-armv7l/wheel/tmkit
2023-07-10T00:19:01,375   creating build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-07-10T00:19:01,376   copying build/lib/tmkit/retrieve/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-07-10T00:19:01,378   copying build/lib/tmkit/retrieve/MSA.py -> build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-07-10T00:19:01,381   copying build/lib/tmkit/retrieve/XML.py -> build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-07-10T00:19:01,383   copying build/lib/tmkit/retrieve/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/retrieve
2023-07-10T00:19:01,385   creating build/bdist.linux-armv7l/wheel/tmkit/chain
2023-07-10T00:19:01,386   copying build/lib/tmkit/chain/PDB.py -> build/bdist.linux-armv7l/wheel/tmkit/chain
2023-07-10T00:19:01,388   copying build/lib/tmkit/chain/Collate.py -> build/bdist.linux-armv7l/wheel/tmkit/chain
2023-07-10T00:19:01,391   copying build/lib/tmkit/chain/__init__.py -> build/bdist.linux-armv7l/wheel/tmkit/chain
2023-07-10T00:19:01,392   copying build/lib/tmkit/chain/CollateBatch.py -> build/bdist.linux-armv7l/wheel/tmkit/chain
2023-07-10T00:19:01,394   running install_egg_info
2023-07-10T00:19:01,404   Copying tmkit.egg-info to build/bdist.linux-armv7l/wheel/tmkit-0.0.3-py3.9.egg-info
2023-07-10T00:19:01,414   running install_scripts
2023-07-10T00:19:01,429   creating build/bdist.linux-armv7l/wheel/tmkit-0.0.3.dist-info/WHEEL
2023-07-10T00:19:01,432   creating '/tmp/pip-wheel-llj1kcev/.tmp-rfxocvbl/tmkit-0.0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-07-10T00:19:01,434   adding 'tests/__init__.py'
2023-07-10T00:19:01,435   adding 'tests/cath_test.py'
2023-07-10T00:19:01,436   adding 'tests/collation_test.py'
2023-07-10T00:19:01,437   adding 'tests/conftest.py'
2023-07-10T00:19:01,438   adding 'tests/feature_test.py'
2023-07-10T00:19:01,439   adding 'tests/mapping_test.py'
2023-07-10T00:19:01,440   adding 'tests/mutation_test.py'
2023-07-10T00:19:01,441   adding 'tests/residue_contact_test.py'
2023-07-10T00:19:01,443   adding 'tests/sequence_test.py'
2023-07-10T00:19:01,444   adding 'tests/topology_test.py'
2023-07-10T00:19:01,446   adding 'tmkit/.env'
2023-07-10T00:19:01,447   adding 'tmkit/Path.py'
2023-07-10T00:19:01,448   adding 'tmkit/__init__.py'
2023-07-10T00:19:01,449   adding 'tmkit/__main__.py'
2023-07-10T00:19:01,451   adding 'tmkit/cath.py'
2023-07-10T00:19:01,452   adding 'tmkit/collate.py'
2023-07-10T00:19:01,453   adding 'tmkit/edge.py'
2023-07-10T00:19:01,455   adding 'tmkit/feature.py'
2023-07-10T00:19:01,456   adding 'tmkit/fetch.py'
2023-07-10T00:19:01,457   adding 'tmkit/mapping.py'
2023-07-10T00:19:01,459   adding 'tmkit/msa.py'
2023-07-10T00:19:01,460   adding 'tmkit/mut.py'
2023-07-10T00:19:01,461   adding 'tmkit/ppi.py'
2023-07-10T00:19:01,463   adding 'tmkit/qc.py'
2023-07-10T00:19:01,464   adding 'tmkit/rrc.py'
2023-07-10T00:19:01,465   adding 'tmkit/seq.py'
2023-07-10T00:19:01,467   adding 'tmkit/topo.py'
2023-07-10T00:19:01,468   adding 'tmkit/vs.py'
2023-07-10T00:19:01,470   adding 'tmkit/base/PDB.py'
2023-07-10T00:19:01,472   adding 'tmkit/base/Position.py'
2023-07-10T00:19:01,473   adding 'tmkit/base/__init__.py'
2023-07-10T00:19:01,474   adding 'tmkit/chain/Collate.py'
2023-07-10T00:19:01,477   adding 'tmkit/chain/CollateBatch.py'
2023-07-10T00:19:01,478   adding 'tmkit/chain/PDB.py'
2023-07-10T00:19:01,479   adding 'tmkit/chain/__init__.py'
2023-07-10T00:19:01,481   adding 'tmkit/channel/Workbench.py'
2023-07-10T00:19:01,482   adding 'tmkit/channel/__init__.py'
2023-07-10T00:19:01,484   adding 'tmkit/contact/Evaluator.py'
2023-07-10T00:19:01,487   adding 'tmkit/contact/Reader.py'
2023-07-10T00:19:01,488   adding 'tmkit/contact/__init__.py'
2023-07-10T00:19:01,491   adding 'tmkit/db/Connectivity.py'
2023-07-10T00:19:01,492   adding 'tmkit/db/Reader.py'
2023-07-10T00:19:01,493   adding 'tmkit/db/__init__.py'
2023-07-10T00:19:01,495   adding 'tmkit/db/biogrid/Reader.py'
2023-07-10T00:19:01,496   adding 'tmkit/db/biogrid/__init__.py'
2023-07-10T00:19:01,498   adding 'tmkit/db/cath/Reader.py'
2023-07-10T00:19:01,499   adding 'tmkit/db/cath/__init__.py'
2023-07-10T00:19:01,501   adding 'tmkit/db/construct/Network.py'
2023-07-10T00:19:01,502   adding 'tmkit/db/construct/__init__.py'
2023-07-10T00:19:01,504   adding 'tmkit/db/intact/Reader.py'
2023-07-10T00:19:01,505   adding 'tmkit/db/intact/__init__.py'
2023-07-10T00:19:01,507   adding 'tmkit/db/muthtp/Reader.py'
2023-07-10T00:19:01,508   adding 'tmkit/db/muthtp/__init__.py'
2023-07-10T00:19:01,510   adding 'tmkit/db/predmuthtp/Reader.py'
2023-07-10T00:19:01,511   adding 'tmkit/db/predmuthtp/__init__.py'
2023-07-10T00:19:01,512   adding 'tmkit/id/Fasta.py'
2023-07-10T00:19:01,514   adding 'tmkit/id/Mapping.py'
2023-07-10T00:19:01,515   adding 'tmkit/id/PDB.py'
2023-07-10T00:19:01,516   adding 'tmkit/id/__init__.py'
2023-07-10T00:19:01,517   adding 'tmkit/interface/Tool.py'
2023-07-10T00:19:01,519   adding 'tmkit/interface/Topology.py'
2023-07-10T00:19:01,520   adding 'tmkit/interface/__init__.py'
2023-07-10T00:19:01,521   adding 'tmkit/name/Mapping.py'
2023-07-10T00:19:01,522   adding 'tmkit/name/__init__.py'
2023-07-10T00:19:01,524   adding 'tmkit/position/__init__.py'
2023-07-10T00:19:01,526   adding 'tmkit/position/scenario/Segment.py'
2023-07-10T00:19:01,527   adding 'tmkit/position/scenario/Separation.py'
2023-07-10T00:19:01,528   adding 'tmkit/position/scenario/__init__.py'
2023-07-10T00:19:01,530   adding 'tmkit/property/HelixSurface.py'
2023-07-10T00:19:01,531   adding 'tmkit/property/__init__.py'
2023-07-10T00:19:01,533   adding 'tmkit/property/lips.pl'
2023-07-10T00:19:01,535   adding 'tmkit/retrieve/MSA.py'
2023-07-10T00:19:01,537   adding 'tmkit/retrieve/PDB.py'
2023-07-10T00:19:01,538   adding 'tmkit/retrieve/XML.py'
2023-07-10T00:19:01,539   adding 'tmkit/retrieve/__init__.py'
2023-07-10T00:19:01,541   adding 'tmkit/seqnetrr/Compare.py'
2023-07-10T00:19:01,543   adding 'tmkit/seqnetrr/ComputLib.py'
2023-07-10T00:19:01,545   adding 'tmkit/seqnetrr/Controller.py'
2023-07-10T00:19:01,546   adding 'tmkit/seqnetrr/__init__.py'
2023-07-10T00:19:01,547   adding 'tmkit/seqnetrr/combo/Length.py'
2023-07-10T00:19:01,549   adding 'tmkit/seqnetrr/combo/Param.py'
2023-07-10T00:19:01,550   adding 'tmkit/seqnetrr/combo/Position.py'
2023-07-10T00:19:01,551   adding 'tmkit/seqnetrr/combo/Separation.py'
2023-07-10T00:19:01,552   adding 'tmkit/seqnetrr/combo/__init__.py'
2023-07-10T00:19:01,555   adding 'tmkit/seqnetrr/graph/Bipartite.py'
2023-07-10T00:19:01,556   adding 'tmkit/seqnetrr/graph/Cumulative.py'
2023-07-10T00:19:01,559   adding 'tmkit/seqnetrr/graph/Unipartite.py'
2023-07-10T00:19:01,560   adding 'tmkit/seqnetrr/graph/__init__.py'
2023-07-10T00:19:01,562   adding 'tmkit/seqnetrr/net/Reader.py'
2023-07-10T00:19:01,564   adding 'tmkit/seqnetrr/net/__init__.py'
2023-07-10T00:19:01,565   adding 'tmkit/seqnetrr/window/Pair.py'
2023-07-10T00:19:01,567   adding 'tmkit/seqnetrr/window/Single.py'
2023-07-10T00:19:01,568   adding 'tmkit/seqnetrr/window/__init__.py'
2023-07-10T00:19:01,570   adding 'tmkit/seqnetrr/window/base/Pair.py'
2023-07-10T00:19:01,571   adding 'tmkit/seqnetrr/window/base/Single.py'
2023-07-10T00:19:01,572   adding 'tmkit/seqnetrr/window/base/__init__.py'
2023-07-10T00:19:01,574   adding 'tmkit/sequence/Fasta.py'
2023-07-10T00:19:01,575   adding 'tmkit/sequence/Index.py'
2023-07-10T00:19:01,576   adding 'tmkit/sequence/PDB.py'
2023-07-10T00:19:01,577   adding 'tmkit/sequence/XML.py'
2023-07-10T00:19:01,578   adding 'tmkit/sequence/__init__.py'
2023-07-10T00:19:01,580   adding 'tmkit/structure/PDB.py'
2023-07-10T00:19:01,581   adding 'tmkit/structure/__init__.py'
2023-07-10T00:19:01,583   adding 'tmkit/structure/ppi/Label.py'
2023-07-10T00:19:01,584   adding 'tmkit/structure/ppi/__init__.py'
2023-07-10T00:19:01,586   adding 'tmkit/structure/rrc/Label.py'
2023-07-10T00:19:01,587   adding 'tmkit/structure/rrc/__init__.py'
2023-07-10T00:19:01,589   adding 'tmkit/topology/Phobius.py'
2023-07-10T00:19:01,590   adding 'tmkit/topology/TMHMM.py'
2023-07-10T00:19:01,592   adding 'tmkit/topology/__init__.py'
2023-07-10T00:19:01,595   adding 'tmkit/topology/lib/Phobius.py'
2023-07-10T00:19:01,596   adding 'tmkit/topology/lib/__init__.py'
2023-07-10T00:19:01,598   adding 'tmkit/topology/pdbtm/Component.py'
2023-07-10T00:19:01,600   adding 'tmkit/topology/pdbtm/Determine.py'
2023-07-10T00:19:01,601   adding 'tmkit/topology/pdbtm/Segment.py'
2023-07-10T00:19:01,602   adding 'tmkit/topology/pdbtm/TMH.py'
2023-07-10T00:19:01,603   adding 'tmkit/topology/pdbtm/ToFastaId.py'
2023-07-10T00:19:01,605   adding 'tmkit/topology/pdbtm/__init__.py'
2023-07-10T00:19:01,606   adding 'tmkit/util/Console.py'
2023-07-10T00:19:01,608   adding 'tmkit/util/Kit.py'
2023-07-10T00:19:01,610   adding 'tmkit/util/Reader.py'
2023-07-10T00:19:01,611   adding 'tmkit/util/Writer.py'
2023-07-10T00:19:01,612   adding 'tmkit/util/__init__.py'
2023-07-10T00:19:01,614   adding 'tmkit/visualize/__init__.py'
2023-07-10T00:19:01,616   adding 'tmkit/visualize/component/Color.py'
2023-07-10T00:19:01,617   adding 'tmkit/visualize/component/InterfaceResidues.py'
2023-07-10T00:19:01,618   adding 'tmkit/visualize/component/Select.py'
2023-07-10T00:19:01,619   adding 'tmkit/visualize/component/__init__.py'
2023-07-10T00:19:01,621   adding 'tmkit/visualize/component/focal_blur.py'
2023-07-10T00:19:01,623   adding 'tmkit/visualize/component/show_contacts.py'
2023-07-10T00:19:01,624   adding 'tmkit/visualize/component/palette/__init__.py'
2023-07-10T00:19:01,626   adding 'tmkit/visualize/component/palette/data2bfactor.py'
2023-07-10T00:19:01,627   adding 'tmkit/visualize/component/palette/spectrumany.py'
2023-07-10T00:19:01,629   adding 'tmkit/visualize/func/Coloring.py'
2023-07-10T00:19:01,630   adding 'tmkit/visualize/func/__init__.py'
2023-07-10T00:19:01,632   adding 'tmkit/visualize/isite/Labelling.py'
2023-07-10T00:19:01,634   adding 'tmkit/visualize/isite/ProtocolDeepTMInter.py'
2023-07-10T00:19:01,635   adding 'tmkit/visualize/isite/__init__.py'
2023-07-10T00:19:01,636   adding 'tmkit/visualize/small/Label.py'
2023-07-10T00:19:01,638   adding 'tmkit/visualize/small/Local.py'
2023-07-10T00:19:01,639   adding 'tmkit/visualize/small/Palette.py'
2023-07-10T00:19:01,640   adding 'tmkit/visualize/small/Select.py'
2023-07-10T00:19:01,641   adding 'tmkit/visualize/small/Style.py'
2023-07-10T00:19:01,642   adding 'tmkit/visualize/small/__init__.py'
2023-07-10T00:19:01,649   adding 'tmkit-0.0.3.dist-info/LICENSE'
2023-07-10T00:19:01,650   adding 'tmkit-0.0.3.dist-info/METADATA'
2023-07-10T00:19:01,651   adding 'tmkit-0.0.3.dist-info/WHEEL'
2023-07-10T00:19:01,652   adding 'tmkit-0.0.3.dist-info/top_level.txt'
2023-07-10T00:19:01,654   adding 'tmkit-0.0.3.dist-info/RECORD'
2023-07-10T00:19:01,659   removing build/bdist.linux-armv7l/wheel
2023-07-10T00:19:01,777   Building wheel for tmkit (pyproject.toml): finished with status 'done'
2023-07-10T00:19:01,785   Created wheel for tmkit: filename=tmkit-0.0.3-py3-none-any.whl size=159728 sha256=fde790f1ac2f318e39786f202cb3c903d2969dcae909524767b8c58dff6a14ec
2023-07-10T00:19:01,786   Stored in directory: /tmp/pip-ephem-wheel-cache-djr6k6mc/wheels/8e/6f/11/1e310bbbb581371224a9554446a06336f23a4268dad65db3e7
2023-07-10T00:19:01,802 Successfully built tmkit
2023-07-10T00:19:01,811 Removed build tracker: '/tmp/pip-build-tracker-quq3d9ab'