2023-07-30T09:17:40,891 Created temporary directory: /tmp/pip-build-tracker-ff0t7h9b
2023-07-30T09:17:40,892 Initialized build tracking at /tmp/pip-build-tracker-ff0t7h9b
2023-07-30T09:17:40,893 Created build tracker: /tmp/pip-build-tracker-ff0t7h9b
2023-07-30T09:17:40,893 Entered build tracker: /tmp/pip-build-tracker-ff0t7h9b
2023-07-30T09:17:40,893 Created temporary directory: /tmp/pip-wheel-nf9rbhc5
2023-07-30T09:17:40,896 Created temporary directory: /tmp/pip-ephem-wheel-cache-qduyubfw
2023-07-30T09:17:40,922 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-07-30T09:17:40,925 2 location(s) to search for versions of splam:
2023-07-30T09:17:40,925 * https://pypi.org/simple/splam/
2023-07-30T09:17:40,925 * https://www.piwheels.org/simple/splam/
2023-07-30T09:17:40,926 Fetching project page and analyzing links: https://pypi.org/simple/splam/
2023-07-30T09:17:40,926 Getting page https://pypi.org/simple/splam/
2023-07-30T09:17:40,928 Found index url https://pypi.org/simple/
2023-07-30T09:17:40,979 Fetched page https://pypi.org/simple/splam/ as application/vnd.pypi.simple.v1+json
2023-07-30T09:17:40,985   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/57/2a/d68f86c46b3152c9072975cb1c8b3f2345e0f71cea763c0635ca8c5e0261/splam-0.2.9-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,986   Found link https://files.pythonhosted.org/packages/ba/e8/4cf0f802bf26fd6587829e3688109caef6d26e13d19ce003ac876212da15/splam-0.2.9.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 0.2.9
2023-07-30T09:17:40,986   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f0/97/c31f00ac8a786213c4a50dd993cd04e61af08766e9559f244fb9c3929178/splam-0.2.10-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,987   Found link https://files.pythonhosted.org/packages/72/d1/671663c98d0cfca3218b880633390493fcebf9972175a7c4d2752259f2ea/splam-0.2.10.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 0.2.10
2023-07-30T09:17:40,987   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/ad/36/84239a43f206dfbfe07c6e6f76ef8c54235439210640aeacc8cb20e24c2e/splam-0.2.11-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,988   Found link https://files.pythonhosted.org/packages/c7/b3/96a175c203358d735694d7d5fd9261ef8683af968e14e473e823d159cee1/splam-0.2.11.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 0.2.11
2023-07-30T09:17:40,988   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/a5/f5/e15307ccb65ec9c225b7f1af65ee2c8880ba8eb049d386f4c9da459b2e1e/splam-0.2.12-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,988   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ba/88/6cac004352d4aa92aabdfd31f9b96919f8044db486185d3fd3c924583bc8/splam-0.2.12-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,989   Found link https://files.pythonhosted.org/packages/32/fa/a9795e9df88e8ea6c6788ae171702d5f9d8ce2c3472408ab0784f08a7b91/splam-0.2.12.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 0.2.12
2023-07-30T09:17:40,989   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/59/88/fefee12f8e44d6879a0970d37b42fc4dc54010f78b1ee91f6db366c1f125/splam-0.2.13-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,989   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/64/13/d601e5e99b31891d95bc0a6201367dab38f12faaadcb6aedbee7725dca71/splam-0.2.13-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,990   Found link https://files.pythonhosted.org/packages/cf/fb/2e5425fcdb2e5fd7ff963b174b1582816154fd0373bbc96edf4e851d272d/splam-0.2.13.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 0.2.13
2023-07-30T09:17:40,990   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/da/65/a129eabb1d673da72f1d7dfd3495c01c89da78569b7f2dba2c746a0c0f29/splam-0.2.14-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,991   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/6f/79/2fdaa68664126c8c71bac526b41e1e35e4195879170c8129a8d482f3ae7b/splam-0.2.14-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,991   Found link https://files.pythonhosted.org/packages/9b/3f/d7dd2411528494ed5062665c3b5d5d7d8422fd11fa181d5fc01ea67d7dbf/splam-0.2.14.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 0.2.14
2023-07-30T09:17:40,991   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/f4/9a/e7d1f5f16d77888ac5d0935e180fa2210e875ff487909519d6871e1301da/splam-0.2.15-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,992   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/40/b6/eda61824794c736e52c09353dfbbd70eea4d0f0ab31896f3688d269ab64b/splam-0.2.15-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,992   Found link https://files.pythonhosted.org/packages/29/d0/5e9ef93e49636308cb56b70a06c8932321cb60a4aae678d8bb1d213b52b5/splam-0.2.15.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 0.2.15
2023-07-30T09:17:40,992   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/e5/17/caa4b05a6370f2d197ec174fe1968f63acc357db5923efca0860b3a5e141/splam-0.2.16-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,993   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/fe/a5/d90a02293e34acf5515a8f435ae90afeb823336d6232a7bedf01436a00f9/splam-0.2.17-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,993   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/ef/af/7db5183d8c36a250bb4547c58610624b4d1067ea0eb119addc8986ce6ec1/splam-0.2.17-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,993   Found link https://files.pythonhosted.org/packages/26/3a/0e89dd56f9617853061d7c4ed6a220a414a01bba9f0005e54da52a1ad22e/splam-0.2.17.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 0.2.17
2023-07-30T09:17:40,993   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/bd/50/ae02dcd9e7c53df59acc9ad83ac389a886e55254cd6953614d43f0eaac60/splam-0.3.0-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,994   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/78/0b/8b0b45b16922007f88c9b81357cde8b84f9ea45327104b00724024e722ec/splam-0.3.0-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,994   Found link https://files.pythonhosted.org/packages/e5/c7/4bf13e849aefc7cfdd94f142e6267e4937c61d7fb9fbfe1119953f6a5e72/splam-0.3.0.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 0.3.0
2023-07-30T09:17:40,994   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/c8/55/d8079e937d1f568ac9358237871b9d4d6d28abf1e8e8ec2b8073db7b166a/splam-0.3.1-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,995   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/6d/9f/5e7c396bd04da9866f89f51574bd3fec1e691b279116e4d4de92b75b6538/splam-1.0.0-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,995   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/56/ae/c9e443ec09db88b2b2aaa18ebc6b12751b321d731ce21964ee188067bb0f/splam-1.0.0-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,995   Found link https://files.pythonhosted.org/packages/67/44/44bd83f836534c4fa402a0470c3d72b41d7e8c8ad860f9886f54570da2e6/splam-1.0.0.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 1.0.0
2023-07-30T09:17:40,996   Skipping link: No binaries permitted for splam: https://files.pythonhosted.org/packages/43/45/27c64605655d3127bf6155bc060f98fb565e631553e4f0e0a53d3922ebf3/splam-1.0.1-cp38-cp38-macosx_13_0_arm64.whl (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,996   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/6f/4d/0b5427df4d5d74ba5a98e28805b45fee4b15d2cad1e9aa91069306c29da7/splam-1.0.1-py3.8-macosx-11.1-arm64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,996   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/da/e1/11ee65eb50a2f628f92249d84cd72eddbc1386afbc82c7410fceb627d995/splam-1.0.1-py3.9-linux-x86_64.egg (from https://pypi.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:40,997   Found link https://files.pythonhosted.org/packages/ad/3c/5a2fcc44ca9afa6bc1cb4fe6a30ba6495f9c1359c6b610536cb6c7998ca1/splam-1.0.1.tar.gz (from https://pypi.org/simple/splam/) (requires-python:>=3.6), version: 1.0.1
2023-07-30T09:17:40,997 Fetching project page and analyzing links: https://www.piwheels.org/simple/splam/
2023-07-30T09:17:40,997 Getting page https://www.piwheels.org/simple/splam/
2023-07-30T09:17:40,999 Found index url https://www.piwheels.org/simple/
2023-07-30T09:17:41,168 Fetched page https://www.piwheels.org/simple/splam/ as text/html
2023-07-30T09:17:41,177   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=1df2348f054c2c94911b9f0f12cb53ffd0d73bbb7a08e64ea0c6783ceee0aff8 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,177   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=1df2348f054c2c94911b9f0f12cb53ffd0d73bbb7a08e64ea0c6783ceee0aff8 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,177   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=a8181a29dd75196ac29a057a71ae8aa567d3180e65dbefd5f00ffc44d6ceaabb (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,178   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=a8181a29dd75196ac29a057a71ae8aa567d3180e65dbefd5f00ffc44d6ceaabb (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,178   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=db7f7a90b02b4b219de50c195ee1ca9b24be11aa7f75c3972daa508e5af03ed7 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,178   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=db7f7a90b02b4b219de50c195ee1ca9b24be11aa7f75c3972daa508e5af03ed7 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,178   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.3.0-cp39-cp39-linux_armv7l.whl#sha256=c3a1b0ed2154e6f57b99c5dc2f09741faf5870038b8f86b488481cbc1cea6038 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,178   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.3.0-cp39-cp39-linux_armv6l.whl#sha256=c3a1b0ed2154e6f57b99c5dc2f09741faf5870038b8f86b488481cbc1cea6038 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,179   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.3.0-cp37-cp37m-linux_armv7l.whl#sha256=e995d4cf8f5f1d21c7acb05a431d0a13318d1dfb4fff327949db624e7b3d4406 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,179   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.3.0-cp37-cp37m-linux_armv6l.whl#sha256=e995d4cf8f5f1d21c7acb05a431d0a13318d1dfb4fff327949db624e7b3d4406 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,179   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.15-cp39-cp39-linux_armv7l.whl#sha256=61b2ad768b658cf35de2ec1cadc48174bba190e551c2f6e110cef152a0538d0f (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,179   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.15-cp39-cp39-linux_armv6l.whl#sha256=61b2ad768b658cf35de2ec1cadc48174bba190e551c2f6e110cef152a0538d0f (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,179   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.15-cp37-cp37m-linux_armv7l.whl#sha256=0a4fa9a067616033f881d9c22e1276e29cc4428f1241db0d262c13609379e2cf (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,180   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.15-cp37-cp37m-linux_armv6l.whl#sha256=0a4fa9a067616033f881d9c22e1276e29cc4428f1241db0d262c13609379e2cf (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,180   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.14-cp39-cp39-linux_armv7l.whl#sha256=9237ea34fa9b75f3eca15e7e1d738cc0dc9aad5de23b68b3716774ca83e9319c (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,180   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.14-cp39-cp39-linux_armv6l.whl#sha256=9237ea34fa9b75f3eca15e7e1d738cc0dc9aad5de23b68b3716774ca83e9319c (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,180   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.14-cp37-cp37m-linux_armv7l.whl#sha256=198f24795b97dfeeb87bfd8760ef5894be763c7c872f489ea0c4292c781067b6 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,180   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.14-cp37-cp37m-linux_armv6l.whl#sha256=198f24795b97dfeeb87bfd8760ef5894be763c7c872f489ea0c4292c781067b6 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,181   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.13-cp39-cp39-linux_armv7l.whl#sha256=b569a1f7ec82ed71a728c11cab8946f18f70afb705bd6f1811ec5e85b464f975 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,181   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.13-cp39-cp39-linux_armv6l.whl#sha256=b569a1f7ec82ed71a728c11cab8946f18f70afb705bd6f1811ec5e85b464f975 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,181   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.13-cp37-cp37m-linux_armv7l.whl#sha256=2f178935936e8dfbfdc05d7b0d4ca56b74a143f1d0a8f116272e7647c01e1e13 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,181   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.13-cp37-cp37m-linux_armv6l.whl#sha256=2f178935936e8dfbfdc05d7b0d4ca56b74a143f1d0a8f116272e7647c01e1e13 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,181   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.10-cp39-cp39-linux_armv7l.whl#sha256=bc7a085b3f086edc5395dc060b95fe568bab61c94fd8cf56dc6f58b7e62442e3 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,182   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.10-cp39-cp39-linux_armv6l.whl#sha256=bc7a085b3f086edc5395dc060b95fe568bab61c94fd8cf56dc6f58b7e62442e3 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,182   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.10-cp37-cp37m-linux_armv7l.whl#sha256=177b04f8ab6035570b2a34ff26f1903996d7f554131eaaddd22614d25e474b0c (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,182   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.10-cp37-cp37m-linux_armv6l.whl#sha256=177b04f8ab6035570b2a34ff26f1903996d7f554131eaaddd22614d25e474b0c (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,182   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.9-cp39-cp39-linux_armv7l.whl#sha256=434410fd7dfc947ef68b0c85650d0b6930abcf1fc52e3a4db0fde3c579d0530c (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,182   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.9-cp39-cp39-linux_armv6l.whl#sha256=434410fd7dfc947ef68b0c85650d0b6930abcf1fc52e3a4db0fde3c579d0530c (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,183   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.9-cp37-cp37m-linux_armv7l.whl#sha256=c68c4cf3ddbbeac64db06ce5656b1f5ec7df1d53684b7ece65ce366d235c82a1 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,183   Skipping link: No binaries permitted for splam: https://www.piwheels.org/simple/splam/splam-0.2.9-cp37-cp37m-linux_armv6l.whl#sha256=c68c4cf3ddbbeac64db06ce5656b1f5ec7df1d53684b7ece65ce366d235c82a1 (from https://www.piwheels.org/simple/splam/) (requires-python:>=3.6)
2023-07-30T09:17:41,183 Skipping link: not a file: https://www.piwheels.org/simple/splam/
2023-07-30T09:17:41,183 Skipping link: not a file: https://pypi.org/simple/splam/
2023-07-30T09:17:41,202 Given no hashes to check 1 links for project 'splam': discarding no candidates
2023-07-30T09:17:41,219 Collecting splam==1.0.1
2023-07-30T09:17:41,221   Created temporary directory: /tmp/pip-unpack-lbm0j570
2023-07-30T09:17:41,273   Downloading splam-1.0.1.tar.gz (40.6 MB)
2023-07-30T09:17:47,473   Added splam==1.0.1 from https://files.pythonhosted.org/packages/ad/3c/5a2fcc44ca9afa6bc1cb4fe6a30ba6495f9c1359c6b610536cb6c7998ca1/splam-1.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-ff0t7h9b'
2023-07-30T09:17:47,475   Running setup.py (path:/tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/setup.py) egg_info for package splam
2023-07-30T09:17:47,475   Created temporary directory: /tmp/pip-pip-egg-info-j0c_f9zr
2023-07-30T09:17:47,476   Preparing metadata (setup.py): started
2023-07-30T09:17:47,477   Running command python setup.py egg_info
2023-07-30T09:17:48,274   running egg_info
2023-07-30T09:17:48,276   creating /tmp/pip-pip-egg-info-j0c_f9zr/splam.egg-info
2023-07-30T09:17:48,303   writing /tmp/pip-pip-egg-info-j0c_f9zr/splam.egg-info/PKG-INFO
2023-07-30T09:17:48,306   writing dependency_links to /tmp/pip-pip-egg-info-j0c_f9zr/splam.egg-info/dependency_links.txt
2023-07-30T09:17:48,308   writing entry points to /tmp/pip-pip-egg-info-j0c_f9zr/splam.egg-info/entry_points.txt
2023-07-30T09:17:48,310   writing requirements to /tmp/pip-pip-egg-info-j0c_f9zr/splam.egg-info/requires.txt
2023-07-30T09:17:48,311   writing top-level names to /tmp/pip-pip-egg-info-j0c_f9zr/splam.egg-info/top_level.txt
2023-07-30T09:17:48,313   writing manifest file '/tmp/pip-pip-egg-info-j0c_f9zr/splam.egg-info/SOURCES.txt'
2023-07-30T09:17:48,397   reading manifest file '/tmp/pip-pip-egg-info-j0c_f9zr/splam.egg-info/SOURCES.txt'
2023-07-30T09:17:48,399   reading manifest template 'MANIFEST.in'
2023-07-30T09:17:48,646   adding license file 'LICENSE'
2023-07-30T09:17:48,688   writing manifest file '/tmp/pip-pip-egg-info-j0c_f9zr/splam.egg-info/SOURCES.txt'
2023-07-30T09:17:48,760   Preparing metadata (setup.py): finished with status 'done'
2023-07-30T09:17:48,766   Source in /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2 has version 1.0.1, which satisfies requirement splam==1.0.1 from https://files.pythonhosted.org/packages/ad/3c/5a2fcc44ca9afa6bc1cb4fe6a30ba6495f9c1359c6b610536cb6c7998ca1/splam-1.0.1.tar.gz
2023-07-30T09:17:48,767   Removed splam==1.0.1 from https://files.pythonhosted.org/packages/ad/3c/5a2fcc44ca9afa6bc1cb4fe6a30ba6495f9c1359c6b610536cb6c7998ca1/splam-1.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-ff0t7h9b'
2023-07-30T09:17:48,773 Created temporary directory: /tmp/pip-unpack-gr5cxuwp
2023-07-30T09:17:48,773 Building wheels for collected packages: splam
2023-07-30T09:17:48,777   Created temporary directory: /tmp/pip-wheel-tilin265
2023-07-30T09:17:48,777   Building wheel for splam (setup.py): started
2023-07-30T09:17:48,778   Destination directory: /tmp/pip-wheel-tilin265
2023-07-30T09:17:48,779   Running command python setup.py bdist_wheel
2023-07-30T09:17:49,586   running bdist_wheel
2023-07-30T09:17:49,665   running build
2023-07-30T09:17:49,665   running build_py
2023-07-30T09:17:49,694   creating build
2023-07-30T09:17:49,694   creating build/lib.linux-armv7l-cpython-39
2023-07-30T09:17:49,695   creating build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,696   copying splam/prediction.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,699   copying splam/config.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,700   copying splam/clean_gff.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,702   copying splam/extract_gff.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,704   copying splam/parse.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,706   copying splam/main.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,708   copying splam/__init__.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,710   copying splam/helper.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,712   copying splam/chr_size.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,714   copying splam/SPLAM.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,716   copying splam/header.py -> build/lib.linux-armv7l-cpython-39/splam
2023-07-30T09:17:49,718   running build_ext
2023-07-30T09:17:50,075   -- The C compiler identification is GNU 10.2.1
2023-07-30T09:17:50,403   -- The CXX compiler identification is GNU 10.2.1
2023-07-30T09:17:50,450   -- Detecting C compiler ABI info
2023-07-30T09:17:50,816   -- Detecting C compiler ABI info - done
2023-07-30T09:17:50,882   -- Check for working C compiler: /usr/bin/cc - skipped
2023-07-30T09:17:50,884   -- Detecting C compile features
2023-07-30T09:17:50,886   -- Detecting C compile features - done
2023-07-30T09:17:50,910   -- Detecting CXX compiler ABI info
2023-07-30T09:17:51,308   -- Detecting CXX compiler ABI info - done
2023-07-30T09:17:51,371   -- Check for working CXX compiler: /usr/bin/c++ - skipped
2023-07-30T09:17:51,373   -- Detecting CXX compile features
2023-07-30T09:17:51,376   -- Detecting CXX compile features - done
2023-07-30T09:17:51,401   -- pybind11 v2.11.0 dev1
2023-07-30T09:17:51,464   -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.9.2", minimum required is "3.6")
2023-07-30T09:17:51,966   -- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.9.so
2023-07-30T09:17:51,974   -- Performing Test HAS_FLTO
2023-07-30T09:17:52,589   -- Performing Test HAS_FLTO - Success
2023-07-30T09:17:52,636   -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11")
2023-07-30T09:17:52,637   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/include/htslib
2023-07-30T09:17:52,637   LIBRARY_OUTPUT_DIRECTORY:
2023-07-30T09:17:52,772   EXAMPLE_VERSION_INFO: 1.0.1
2023-07-30T09:17:52,774   -- Configuring done
2023-07-30T09:17:52,858   -- Generating done
2023-07-30T09:17:52,870   -- Build files have been written to: /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/build/temp.linux-armv7l-cpython-39/splam_extract
2023-07-30T09:17:52,931   gmake: Warning: File 'Makefile' has modification time 0.2 s in the future
2023-07-30T09:17:53,021   gmake[1]: Warning: File 'CMakeFiles/Makefile2' has modification time 0.13 s in the future
2023-07-30T09:17:53,028   gmake[2]: Warning: File 'CMakeFiles/htslib.dir/progress.make' has modification time 0.12 s in the future
2023-07-30T09:17:53,071   Scanning dependencies of target htslib
2023-07-30T09:17:53,075   gmake[2]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:17:53,082   gmake[2]: Warning: File 'CMakeFiles/htslib.dir/progress.make' has modification time 0.061 s in the future
2023-07-30T09:17:53,123   [  2%] Creating directories for 'htslib'
2023-07-30T09:17:53,552   [  5%] No download step for 'htslib'
2023-07-30T09:17:53,669   [  8%] No update step for 'htslib'
2023-07-30T09:17:53,791   [ 11%] No patch step for 'htslib'
2023-07-30T09:17:53,903   [ 14%] Performing configure step for 'htslib'
2023-07-30T09:17:59,946   checking for gcc... gcc
2023-07-30T09:18:00,196   checking whether the C compiler works... yes
2023-07-30T09:18:00,197   checking for C compiler default output file name... a.out
2023-07-30T09:18:00,353   checking for suffix of executables...
2023-07-30T09:18:00,572   checking whether we are cross compiling... no
2023-07-30T09:18:00,658   checking for suffix of object files... o
2023-07-30T09:18:00,735   checking whether we are using the GNU C compiler... yes
2023-07-30T09:18:00,813   checking whether gcc accepts -g... yes
2023-07-30T09:18:00,933   checking for gcc option to accept ISO C89... none needed
2023-07-30T09:18:00,935   checking for ranlib... ranlib
2023-07-30T09:18:00,943   checking for grep that handles long lines and -e... /usr/bin/grep
2023-07-30T09:18:01,022   checking for C compiler warning flags... -Wall
2023-07-30T09:18:01,132   checking how to run the C preprocessor... gcc -E
2023-07-30T09:18:01,270   checking for egrep... /usr/bin/grep -E
2023-07-30T09:18:01,745   checking for ANSI C header files... yes
2023-07-30T09:18:01,860   checking for sys/types.h... yes
2023-07-30T09:18:01,990   checking for sys/stat.h... yes
2023-07-30T09:18:02,127   checking for stdlib.h... yes
2023-07-30T09:18:02,265   checking for string.h... yes
2023-07-30T09:18:02,405   checking for memory.h... yes
2023-07-30T09:18:02,545   checking for strings.h... yes
2023-07-30T09:18:02,688   checking for inttypes.h... yes
2023-07-30T09:18:02,828   checking for stdint.h... yes
2023-07-30T09:18:02,978   checking for unistd.h... yes
2023-07-30T09:18:03,146   checking whether _XOPEN_SOURCE is declared... no
2023-07-30T09:18:03,324   checking C compiler flags needed for ssse3... none
2023-07-30T09:18:03,495   checking C compiler flags needed for popcnt... none
2023-07-30T09:18:03,695   checking C compiler flags needed for sse4.1... none
2023-07-30T09:18:03,865   checking C compiler flags needed for avx2... none
2023-07-30T09:18:04,034   checking C compiler flags needed for avx512f... none
2023-07-30T09:18:04,037   checking for pkg-config... /usr/bin/pkg-config
2023-07-30T09:18:04,044   checking pkg-config is at least version 0.9.0... yes
2023-07-30T09:18:04,045   checking for special C compiler options needed for large files... no
2023-07-30T09:18:04,223   checking for _FILE_OFFSET_BITS value needed for large files... 64
2023-07-30T09:18:04,239   checking shared library type for unknown-Linux... plain .so
2023-07-30T09:18:04,440   checking whether the linker supports versioned symbols... yes
2023-07-30T09:18:04,608   checking whether the compiler accepts -fvisibility=hidden... yes
2023-07-30T09:18:04,621   checking for stdlib.h... (cached) yes
2023-07-30T09:18:04,645   checking for unistd.h... (cached) yes
2023-07-30T09:18:04,814   checking for sys/param.h... yes
2023-07-30T09:18:05,007   checking for getpagesize... yes
2023-07-30T09:18:05,360   checking for working mmap... yes
2023-07-30T09:18:05,552   checking for gmtime_r... yes
2023-07-30T09:18:05,755   checking for fsync... yes
2023-07-30T09:18:05,963   checking for drand48... yes
2023-07-30T09:18:06,235   checking for srand48_deterministic... no
2023-07-30T09:18:06,392   checking whether fdatasync is declared... yes
2023-07-30T09:18:06,567   checking for fdatasync... yes
2023-07-30T09:18:06,995   checking for library containing log... -lm
2023-07-30T09:18:07,098   checking for zlib.h... yes
2023-07-30T09:18:07,277   checking for inflate in -lz... yes
2023-07-30T09:18:07,461   checking for library containing recv... none required
2023-07-30T09:18:07,550   checking for bzlib.h... yes
2023-07-30T09:18:07,728   checking for BZ2_bzBuffToBuffCompress in -lbz2... yes
2023-07-30T09:18:07,741   checking whether htscodecs files are present... yes
2023-07-30T09:18:07,743   configure: WARNING: GCS support not enabled: requires libcurl support
2023-07-30T09:18:07,744   configure: WARNING: S3 support not enabled: requires libcurl support
2023-07-30T09:18:07,924   checking for library containing regcomp... none required
2023-07-30T09:18:07,989   configure: creating ./config.status
2023-07-30T09:18:08,310   config.status: creating config.mk
2023-07-30T09:18:08,354   config.status: creating htslib.pc.tmp
2023-07-30T09:18:08,429   config.status: creating config.h
2023-07-30T09:18:08,477   config.status: linking htscodecs_bundled.mk to htscodecs.mk
2023-07-30T09:18:08,696   [ 17%] Performing build step for 'htslib'
2023-07-30T09:18:12,137   Updating htscodecs/htscodecs/version.h : #define HTSCODECS_VERSION_TEXT "1.5.1"
2023-07-30T09:19:06,551   [ 20%] No install step for 'htslib'
2023-07-30T09:19:06,675   [ 22%] Completed 'htslib'
2023-07-30T09:19:06,793   gmake[2]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:19:06,837   [ 22%] Built target htslib
2023-07-30T09:19:07,098   Scanning dependencies of target splam_clean
2023-07-30T09:19:07,114   gmake[2]: Warning: File 'CMakeFiles/splam_clean.dir/depend.make' has modification time 0.27 s in the future
2023-07-30T09:19:07,157   [ 25%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/splam_clean.cpp.o
2023-07-30T09:19:12,434   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp: In function ‘int splam_clean(pybind11::list)’:
2023-07-30T09:19:12,435   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:322:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,435     322 |         char *s_uniq_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), "-o", (char*)outfname_s_uniq_map_cleaned_sort.chars()};
2023-07-30T09:19:12,435         |                                ^~~~~~~~~~
2023-07-30T09:19:12,435   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:322:44: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,436     322 |         char *s_uniq_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), "-o", (char*)outfname_s_uniq_map_cleaned_sort.chars()};
2023-07-30T09:19:12,436         |                                            ^~~~~~
2023-07-30T09:19:12,436   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:322:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,436     322 |         char *s_uniq_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), "-o", (char*)outfname_s_uniq_map_cleaned_sort.chars()};
2023-07-30T09:19:12,436         |                                                    ^~~~
2023-07-30T09:19:12,436   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:322:129: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,437     322 |         char *s_uniq_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), "-o", (char*)outfname_s_uniq_map_cleaned_sort.chars()};
2023-07-30T09:19:12,437         |                                                                                                                                 ^~~~
2023-07-30T09:19:12,437   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:332:33: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,437     332 |         char *s_multi_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars(), "-o", (char*)outfname_s_multi_map_cleaned_nh_updated_sort.chars()};
2023-07-30T09:19:12,437         |                                 ^~~~~~~~~~
2023-07-30T09:19:12,437   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:332:45: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,438     332 |         char *s_multi_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars(), "-o", (char*)outfname_s_multi_map_cleaned_nh_updated_sort.chars()};
2023-07-30T09:19:12,438         |                                             ^~~~~~
2023-07-30T09:19:12,438   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:332:53: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,438     332 |         char *s_multi_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars(), "-o", (char*)outfname_s_multi_map_cleaned_nh_updated_sort.chars()};
2023-07-30T09:19:12,438         |                                                     ^~~~
2023-07-30T09:19:12,438   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:332:142: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,438     332 |         char *s_multi_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars(), "-o", (char*)outfname_s_multi_map_cleaned_nh_updated_sort.chars()};
2023-07-30T09:19:12,439         |                                                                                                                                              ^~~~
2023-07-30T09:19:12,439   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:31: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,439     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:19:12,439         |                               ^~~~~~~~~~
2023-07-30T09:19:12,439   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:43: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,439     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:19:12,439         |                                           ^~~~~~~
2023-07-30T09:19:12,439   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,440     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:19:12,440         |                                                    ^~~~
2023-07-30T09:19:12,440   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:58: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,440     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:19:12,440         |                                                          ^~~~
2023-07-30T09:19:12,440   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:91: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,440     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:19:12,440         |                                                                                           ^~~~
2023-07-30T09:19:12,441   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:25: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,441     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:19:12,441         |                         ^~~~~~~~~~
2023-07-30T09:19:12,441   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:37: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,441     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:19:12,441         |                                     ^~~~~~~
2023-07-30T09:19:12,441   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:46: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,442     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:19:12,442         |                                              ^~~~
2023-07-30T09:19:12,442   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,442     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:19:12,442         |                                                    ^~~~
2023-07-30T09:19:12,442   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:85: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:19:12,443     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:19:12,443         |                                                                                     ^~~~
2023-07-30T09:19:17,433   [ 28%] Building C object CMakeFiles/splam_clean.dir/splam/module/bam_sort.c.o
2023-07-30T09:19:25,448   [ 31%] Building C object CMakeFiles/splam_clean.dir/splam/module/bam.c.o
2023-07-30T09:19:25,934   [ 34%] Building C object CMakeFiles/splam_clean.dir/splam/module/sam_utils.c.o
2023-07-30T09:19:26,451   [ 37%] Building C object CMakeFiles/splam_clean.dir/splam/module/sam_opts.c.o
2023-07-30T09:19:26,763   [ 40%] Building C object CMakeFiles/splam_clean.dir/splam/module/bedidx.c.o
2023-07-30T09:19:28,540   [ 42%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/junc_func.cpp.o
2023-07-30T09:19:31,247   [ 45%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/extract.cpp.o
2023-07-30T09:19:35,224   [ 48%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/clean.cpp.o
2023-07-30T09:19:39,851   [ 51%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/update.cpp.o
2023-07-30T09:19:44,003   [ 54%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/util.cpp.o
2023-07-30T09:19:48,085   [ 57%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/tmerge.cpp.o
2023-07-30T09:19:51,603   [ 60%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/GSam.cpp.o
2023-07-30T09:19:53,817   [ 62%] Building CXX object CMakeFiles/splam_clean.dir/include/gclib/GStr.cpp.o
2023-07-30T09:19:54,907   [ 65%] Building CXX object CMakeFiles/splam_clean.dir/include/gclib/GArgs.cpp.o
2023-07-30T09:19:55,697   [ 68%] Building CXX object CMakeFiles/splam_clean.dir/include/gclib/GBase.cpp.o
2023-07-30T09:19:56,657   [ 71%] Linking CXX shared module ../../lib.linux-armv7l-cpython-39/splam_clean.cpython-39-arm-linux-gnueabihf.so
2023-07-30T09:20:17,548   gmake[2]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:20:17,601   [ 71%] Built target splam_clean
2023-07-30T09:20:17,759   Scanning dependencies of target splam_extract
2023-07-30T09:20:17,774   gmake[2]: Warning: File 'CMakeFiles/splam_extract.dir/depend.make' has modification time 0.27 s in the future
2023-07-30T09:20:17,815   [ 74%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/splam_extract.cpp.o
2023-07-30T09:20:28,010   [ 77%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/extract.cpp.o
2023-07-30T09:20:31,990   [ 80%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/junc_func.cpp.o
2023-07-30T09:20:34,710   [ 82%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/util.cpp.o
2023-07-30T09:20:38,774   [ 85%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/tmerge.cpp.o
2023-07-30T09:20:42,290   [ 88%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/GSam.cpp.o
2023-07-30T09:20:44,722   [ 91%] Building CXX object CMakeFiles/splam_extract.dir/include/gclib/GStr.cpp.o
2023-07-30T09:20:45,805   [ 94%] Building CXX object CMakeFiles/splam_extract.dir/include/gclib/GArgs.cpp.o
2023-07-30T09:20:46,604   [ 97%] Building CXX object CMakeFiles/splam_extract.dir/include/gclib/GBase.cpp.o
2023-07-30T09:20:47,561   [100%] Linking CXX shared module ../../lib.linux-armv7l-cpython-39/splam_extract.cpython-39-arm-linux-gnueabihf.so
2023-07-30T09:21:01,780   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/include/gclib/GVec.hh: In member function ‘setCapacity’:
2023-07-30T09:21:01,781   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/include/gclib/GVec.hh:107:14: warning: argument 1 value ‘4294967295’ exceeds maximum object size 2147483647 [-Walloc-size-larger-than=]
2023-07-30T09:21:01,781     107 |       fArray=new OBJ[NewCapacity];
2023-07-30T09:21:01,781         |              ^
2023-07-30T09:21:01,781   /usr/include/c++/10/new:128:26: note: in a call to allocation function ‘operator new []’ declared here
2023-07-30T09:21:01,782     128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc)
2023-07-30T09:21:01,782         |                          ^
2023-07-30T09:21:10,005   gmake[2]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:21:10,051   [100%] Built target splam_extract
2023-07-30T09:21:10,054   gmake[1]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:21:10,101   gmake: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:21:10,434   -- The C compiler identification is GNU 10.2.1
2023-07-30T09:21:10,781   -- The CXX compiler identification is GNU 10.2.1
2023-07-30T09:21:10,826   -- Detecting C compiler ABI info
2023-07-30T09:21:11,160   -- Detecting C compiler ABI info - done
2023-07-30T09:21:11,219   -- Check for working C compiler: /usr/bin/cc - skipped
2023-07-30T09:21:11,220   -- Detecting C compile features
2023-07-30T09:21:11,222   -- Detecting C compile features - done
2023-07-30T09:21:11,246   -- Detecting CXX compiler ABI info
2023-07-30T09:21:11,676   -- Detecting CXX compiler ABI info - done
2023-07-30T09:21:11,738   -- Check for working CXX compiler: /usr/bin/c++ - skipped
2023-07-30T09:21:11,739   -- Detecting CXX compile features
2023-07-30T09:21:11,742   -- Detecting CXX compile features - done
2023-07-30T09:21:11,769   -- pybind11 v2.11.0 dev1
2023-07-30T09:21:11,835   -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.9.2", minimum required is "3.6")
2023-07-30T09:21:12,341   -- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.9.so
2023-07-30T09:21:12,348   -- Performing Test HAS_FLTO
2023-07-30T09:21:12,944   -- Performing Test HAS_FLTO - Success
2023-07-30T09:21:12,985   -- Found ZLIB: /usr/lib/arm-linux-gnueabihf/libz.so (found version "1.2.11")
2023-07-30T09:21:12,986   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/include/htslib
2023-07-30T09:21:12,986   LIBRARY_OUTPUT_DIRECTORY:
2023-07-30T09:21:13,122   EXAMPLE_VERSION_INFO: 1.0.1
2023-07-30T09:21:13,123   -- Configuring done
2023-07-30T09:21:13,207   -- Generating done
2023-07-30T09:21:13,220   -- Build files have been written to: /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/build/temp.linux-armv7l-cpython-39/splam_clean
2023-07-30T09:21:13,285   gmake: Warning: File 'Makefile' has modification time 0.19 s in the future
2023-07-30T09:21:13,375   gmake[1]: Warning: File 'CMakeFiles/Makefile2' has modification time 0.13 s in the future
2023-07-30T09:21:13,382   gmake[2]: Warning: File 'CMakeFiles/htslib.dir/progress.make' has modification time 0.11 s in the future
2023-07-30T09:21:13,423   Scanning dependencies of target htslib
2023-07-30T09:21:13,427   gmake[2]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:21:13,434   gmake[2]: Warning: File 'CMakeFiles/htslib.dir/progress.make' has modification time 0.062 s in the future
2023-07-30T09:21:13,475   [  2%] Creating directories for 'htslib'
2023-07-30T09:21:13,854   [  5%] No download step for 'htslib'
2023-07-30T09:21:14,013   [  8%] No update step for 'htslib'
2023-07-30T09:21:14,175   [ 11%] No patch step for 'htslib'
2023-07-30T09:21:14,336   [ 14%] Performing configure step for 'htslib'
2023-07-30T09:21:18,872   checking for gcc... gcc
2023-07-30T09:21:19,222   checking whether the C compiler works... yes
2023-07-30T09:21:19,224   checking for C compiler default output file name... a.out
2023-07-30T09:21:19,386   checking for suffix of executables...
2023-07-30T09:21:19,568   checking whether we are cross compiling... no
2023-07-30T09:21:19,655   checking for suffix of object files... o
2023-07-30T09:21:19,734   checking whether we are using the GNU C compiler... yes
2023-07-30T09:21:19,812   checking whether gcc accepts -g... yes
2023-07-30T09:21:19,968   checking for gcc option to accept ISO C89... none needed
2023-07-30T09:21:19,970   checking for ranlib... ranlib
2023-07-30T09:21:19,978   checking for grep that handles long lines and -e... /usr/bin/grep
2023-07-30T09:21:20,060   checking for C compiler warning flags... -Wall
2023-07-30T09:21:20,173   checking how to run the C preprocessor... gcc -E
2023-07-30T09:21:20,282   checking for egrep... /usr/bin/grep -E
2023-07-30T09:21:20,751   checking for ANSI C header files... yes
2023-07-30T09:21:20,870   checking for sys/types.h... yes
2023-07-30T09:21:21,001   checking for sys/stat.h... yes
2023-07-30T09:21:21,135   checking for stdlib.h... yes
2023-07-30T09:21:21,282   checking for string.h... yes
2023-07-30T09:21:21,425   checking for memory.h... yes
2023-07-30T09:21:21,603   checking for strings.h... yes
2023-07-30T09:21:21,748   checking for inttypes.h... yes
2023-07-30T09:21:21,893   checking for stdint.h... yes
2023-07-30T09:21:22,049   checking for unistd.h... yes
2023-07-30T09:21:22,222   checking whether _XOPEN_SOURCE is declared... no
2023-07-30T09:21:22,430   checking C compiler flags needed for ssse3... none
2023-07-30T09:21:22,603   checking C compiler flags needed for popcnt... none
2023-07-30T09:21:22,774   checking C compiler flags needed for sse4.1... none
2023-07-30T09:21:22,943   checking C compiler flags needed for avx2... none
2023-07-30T09:21:23,122   checking C compiler flags needed for avx512f... none
2023-07-30T09:21:23,126   checking for pkg-config... /usr/bin/pkg-config
2023-07-30T09:21:23,135   checking pkg-config is at least version 0.9.0... yes
2023-07-30T09:21:23,138   checking for special C compiler options needed for large files... no
2023-07-30T09:21:23,331   checking for _FILE_OFFSET_BITS value needed for large files... 64
2023-07-30T09:21:23,347   checking shared library type for unknown-Linux... plain .so
2023-07-30T09:21:23,515   checking whether the linker supports versioned symbols... yes
2023-07-30T09:21:23,682   checking whether the compiler accepts -fvisibility=hidden... yes
2023-07-30T09:21:23,696   checking for stdlib.h... (cached) yes
2023-07-30T09:21:23,720   checking for unistd.h... (cached) yes
2023-07-30T09:21:23,887   checking for sys/param.h... yes
2023-07-30T09:21:24,119   checking for getpagesize... yes
2023-07-30T09:21:24,434   checking for working mmap... yes
2023-07-30T09:21:24,631   checking for gmtime_r... yes
2023-07-30T09:21:24,866   checking for fsync... yes
2023-07-30T09:21:25,072   checking for drand48... yes
2023-07-30T09:21:25,302   checking for srand48_deterministic... no
2023-07-30T09:21:25,467   checking whether fdatasync is declared... yes
2023-07-30T09:21:25,646   checking for fdatasync... yes
2023-07-30T09:21:26,045   checking for library containing log... -lm
2023-07-30T09:21:26,144   checking for zlib.h... yes
2023-07-30T09:21:26,349   checking for inflate in -lz... yes
2023-07-30T09:21:26,535   checking for library containing recv... none required
2023-07-30T09:21:26,624   checking for bzlib.h... yes
2023-07-30T09:21:26,804   checking for BZ2_bzBuffToBuffCompress in -lbz2... yes
2023-07-30T09:21:26,816   checking whether htscodecs files are present... yes
2023-07-30T09:21:26,817   configure: WARNING: GCS support not enabled: requires libcurl support
2023-07-30T09:21:26,818   configure: WARNING: S3 support not enabled: requires libcurl support
2023-07-30T09:21:27,001   checking for library containing regcomp... none required
2023-07-30T09:21:27,089   configure: creating ./config.status
2023-07-30T09:21:27,556   config.status: creating config.mk
2023-07-30T09:21:27,629   config.status: creating htslib.pc.tmp
2023-07-30T09:21:27,702   config.status: creating config.h
2023-07-30T09:21:27,732   config.status: config.h is unchanged
2023-07-30T09:21:27,741   config.status: linking htscodecs_bundled.mk to htscodecs.mk
2023-07-30T09:21:27,976   [ 17%] Performing build step for 'htslib'
2023-07-30T09:21:28,376   [ 20%] No install step for 'htslib'
2023-07-30T09:21:28,496   [ 22%] Completed 'htslib'
2023-07-30T09:21:28,611   gmake[2]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:21:28,660   [ 22%] Built target htslib
2023-07-30T09:21:28,857   Scanning dependencies of target splam_clean
2023-07-30T09:21:28,874   gmake[2]: Warning: File 'CMakeFiles/splam_clean.dir/depend.make' has modification time 0.27 s in the future
2023-07-30T09:21:28,917   [ 25%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/splam_clean.cpp.o
2023-07-30T09:21:34,145   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp: In function ‘int splam_clean(pybind11::list)’:
2023-07-30T09:21:34,146   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:322:32: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,146     322 |         char *s_uniq_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), "-o", (char*)outfname_s_uniq_map_cleaned_sort.chars()};
2023-07-30T09:21:34,146         |                                ^~~~~~~~~~
2023-07-30T09:21:34,146   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:322:44: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,146     322 |         char *s_uniq_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), "-o", (char*)outfname_s_uniq_map_cleaned_sort.chars()};
2023-07-30T09:21:34,147         |                                            ^~~~~~
2023-07-30T09:21:34,147   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:322:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,147     322 |         char *s_uniq_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), "-o", (char*)outfname_s_uniq_map_cleaned_sort.chars()};
2023-07-30T09:21:34,147         |                                                    ^~~~
2023-07-30T09:21:34,147   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:322:129: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,147     322 |         char *s_uniq_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), "-o", (char*)outfname_s_uniq_map_cleaned_sort.chars()};
2023-07-30T09:21:34,148         |                                                                                                                                 ^~~~
2023-07-30T09:21:34,148   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:332:33: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,148     332 |         char *s_multi_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars(), "-o", (char*)outfname_s_multi_map_cleaned_nh_updated_sort.chars()};
2023-07-30T09:21:34,148         |                                 ^~~~~~~~~~
2023-07-30T09:21:34,148   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:332:45: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,148     332 |         char *s_multi_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars(), "-o", (char*)outfname_s_multi_map_cleaned_nh_updated_sort.chars()};
2023-07-30T09:21:34,149         |                                             ^~~~~~
2023-07-30T09:21:34,149   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:332:53: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,149     332 |         char *s_multi_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars(), "-o", (char*)outfname_s_multi_map_cleaned_nh_updated_sort.chars()};
2023-07-30T09:21:34,149         |                                                     ^~~~
2023-07-30T09:21:34,149   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:332:142: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,149     332 |         char *s_multi_argv[] = {"samtools", "sort", "-@", (char*)thread_num.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars(), "-o", (char*)outfname_s_multi_map_cleaned_nh_updated_sort.chars()};
2023-07-30T09:21:34,149         |                                                                                                                                              ^~~~
2023-07-30T09:21:34,150   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:31: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,150     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:21:34,150         |                               ^~~~~~~~~~
2023-07-30T09:21:34,150   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:43: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,150     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:21:34,150         |                                           ^~~~~~~
2023-07-30T09:21:34,150   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,150     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:21:34,151         |                                                    ^~~~
2023-07-30T09:21:34,151   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:58: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,151     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:21:34,151         |                                                          ^~~~
2023-07-30T09:21:34,151   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:339:91: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,151     339 |         char *merge_argv[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(),
2023-07-30T09:21:34,151         |                                                                                           ^~~~
2023-07-30T09:21:34,151   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:25: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,152     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:21:34,152         |                         ^~~~~~~~~~
2023-07-30T09:21:34,152   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:37: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,152     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:21:34,152         |                                     ^~~~~~~
2023-07-30T09:21:34,152   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:46: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,152     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:21:34,153         |                                              ^~~~
2023-07-30T09:21:34,153   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,153     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:21:34,153         |                                                    ^~~~
2023-07-30T09:21:34,153   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/splam/module/splam_clean.cpp:357:85: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2023-07-30T09:21:34,153     357 |         char *test[] = {"samtools", "merge", "-f", "-@", (char*)thread_num.chars(), "-o", (char*)outfname_cleaned.chars(), (char*)outfname_ns_uniq_map.chars(), (char*)outfname_ns_multi_map_nh_updated.chars(), (char*)outfname_s_uniq_map_cleaned.chars(), (char*)outfname_s_multi_map_cleaned_nh_updated.chars()};
2023-07-30T09:21:34,154         |                                                                                     ^~~~
2023-07-30T09:21:39,152   [ 28%] Building C object CMakeFiles/splam_clean.dir/splam/module/bam_sort.c.o
2023-07-30T09:21:47,207   [ 31%] Building C object CMakeFiles/splam_clean.dir/splam/module/bam.c.o
2023-07-30T09:21:47,690   [ 34%] Building C object CMakeFiles/splam_clean.dir/splam/module/sam_utils.c.o
2023-07-30T09:21:48,198   [ 37%] Building C object CMakeFiles/splam_clean.dir/splam/module/sam_opts.c.o
2023-07-30T09:21:48,507   [ 40%] Building C object CMakeFiles/splam_clean.dir/splam/module/bedidx.c.o
2023-07-30T09:21:50,305   [ 42%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/junc_func.cpp.o
2023-07-30T09:21:53,020   [ 45%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/extract.cpp.o
2023-07-30T09:21:57,011   [ 48%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/clean.cpp.o
2023-07-30T09:22:01,594   [ 51%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/update.cpp.o
2023-07-30T09:22:05,757   [ 54%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/util.cpp.o
2023-07-30T09:22:09,841   [ 57%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/tmerge.cpp.o
2023-07-30T09:22:13,384   [ 60%] Building CXX object CMakeFiles/splam_clean.dir/splam/module/GSam.cpp.o
2023-07-30T09:22:15,614   [ 62%] Building CXX object CMakeFiles/splam_clean.dir/include/gclib/GStr.cpp.o
2023-07-30T09:22:16,706   [ 65%] Building CXX object CMakeFiles/splam_clean.dir/include/gclib/GArgs.cpp.o
2023-07-30T09:22:17,535   [ 68%] Building CXX object CMakeFiles/splam_clean.dir/include/gclib/GBase.cpp.o
2023-07-30T09:22:18,530   [ 71%] Linking CXX shared module ../../lib.linux-armv7l-cpython-39/splam_clean.cpython-39-arm-linux-gnueabihf.so
2023-07-30T09:22:39,397   gmake[2]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:22:39,451   [ 71%] Built target splam_clean
2023-07-30T09:22:39,596   Scanning dependencies of target splam_extract
2023-07-30T09:22:39,611   gmake[2]: Warning: File 'CMakeFiles/splam_extract.dir/depend.make' has modification time 0.27 s in the future
2023-07-30T09:22:39,651   [ 74%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/splam_extract.cpp.o
2023-07-30T09:22:49,859   [ 77%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/extract.cpp.o
2023-07-30T09:22:53,875   [ 80%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/junc_func.cpp.o
2023-07-30T09:22:56,585   [ 82%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/util.cpp.o
2023-07-30T09:23:00,648   [ 85%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/tmerge.cpp.o
2023-07-30T09:23:04,219   [ 88%] Building CXX object CMakeFiles/splam_extract.dir/splam/module/GSam.cpp.o
2023-07-30T09:23:06,477   [ 91%] Building CXX object CMakeFiles/splam_extract.dir/include/gclib/GStr.cpp.o
2023-07-30T09:23:07,581   [ 94%] Building CXX object CMakeFiles/splam_extract.dir/include/gclib/GArgs.cpp.o
2023-07-30T09:23:08,379   [ 97%] Building CXX object CMakeFiles/splam_extract.dir/include/gclib/GBase.cpp.o
2023-07-30T09:23:09,355   [100%] Linking CXX shared module ../../lib.linux-armv7l-cpython-39/splam_extract.cpython-39-arm-linux-gnueabihf.so
2023-07-30T09:23:23,490   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/include/gclib/GVec.hh: In member function ‘setCapacity’:
2023-07-30T09:23:23,491   /tmp/pip-wheel-nf9rbhc5/splam_15d5f8428ddf4b38b84002189842f5e2/include/gclib/GVec.hh:107:14: warning: argument 1 value ‘4294967295’ exceeds maximum object size 2147483647 [-Walloc-size-larger-than=]
2023-07-30T09:23:23,491     107 |       fArray=new OBJ[NewCapacity];
2023-07-30T09:23:23,491         |              ^
2023-07-30T09:23:23,491   /usr/include/c++/10/new:128:26: note: in a call to allocation function ‘operator new []’ declared here
2023-07-30T09:23:23,491     128 | _GLIBCXX_NODISCARD void* operator new[](std::size_t) _GLIBCXX_THROW (std::bad_alloc)
2023-07-30T09:23:23,492         |                          ^
2023-07-30T09:23:31,686   gmake[2]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:23:31,731   [100%] Built target splam_extract
2023-07-30T09:23:31,734   gmake[1]: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:23:31,781   gmake: warning:  Clock skew detected.  Your build may be incomplete.
2023-07-30T09:23:31,837   /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-07-30T09:23:31,838   !!

2023-07-30T09:23:31,838           ********************************************************************************
2023-07-30T09:23:31,838           Please avoid running ``setup.py`` directly.
2023-07-30T09:23:31,838           Instead, use pypa/build, pypa/installer, pypa/build or
2023-07-30T09:23:31,838           other standards-based tools.

2023-07-30T09:23:31,839           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-07-30T09:23:31,839           ********************************************************************************

2023-07-30T09:23:31,839   !!
2023-07-30T09:23:31,839     self.initialize_options()
2023-07-30T09:23:31,866   installing to build/bdist.linux-armv7l/wheel
2023-07-30T09:23:31,867   running install
2023-07-30T09:23:31,892   running install_lib
2023-07-30T09:23:31,920   creating build/bdist.linux-armv7l
2023-07-30T09:23:31,921   creating build/bdist.linux-armv7l/wheel
2023-07-30T09:23:31,922   copying build/lib.linux-armv7l-cpython-39/splam_clean.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2023-07-30T09:23:31,965   copying build/lib.linux-armv7l-cpython-39/splam_extract.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel
2023-07-30T09:23:31,994   creating build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:31,995   copying build/lib.linux-armv7l-cpython-39/splam/prediction.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:31,998   copying build/lib.linux-armv7l-cpython-39/splam/config.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:31,999   copying build/lib.linux-armv7l-cpython-39/splam/clean_gff.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:32,002   copying build/lib.linux-armv7l-cpython-39/splam/extract_gff.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:32,004   copying build/lib.linux-armv7l-cpython-39/splam/parse.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:32,006   copying build/lib.linux-armv7l-cpython-39/splam/main.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:32,008   copying build/lib.linux-armv7l-cpython-39/splam/__init__.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:32,011   copying build/lib.linux-armv7l-cpython-39/splam/helper.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:32,013   copying build/lib.linux-armv7l-cpython-39/splam/chr_size.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:32,016   copying build/lib.linux-armv7l-cpython-39/splam/SPLAM.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:32,018   copying build/lib.linux-armv7l-cpython-39/splam/header.py -> build/bdist.linux-armv7l/wheel/splam
2023-07-30T09:23:32,020   running install_egg_info
2023-07-30T09:23:32,090   running egg_info
2023-07-30T09:23:32,116   writing splam.egg-info/PKG-INFO
2023-07-30T09:23:32,119   writing dependency_links to splam.egg-info/dependency_links.txt
2023-07-30T09:23:32,121   writing entry points to splam.egg-info/entry_points.txt
2023-07-30T09:23:32,123   writing requirements to splam.egg-info/requires.txt
2023-07-30T09:23:32,124   writing top-level names to splam.egg-info/top_level.txt
2023-07-30T09:23:32,155   reading manifest file 'splam.egg-info/SOURCES.txt'
2023-07-30T09:23:32,335   reading manifest template 'MANIFEST.in'
2023-07-30T09:23:32,637   adding license file 'LICENSE'
2023-07-30T09:23:32,706   writing manifest file 'splam.egg-info/SOURCES.txt'
2023-07-30T09:23:32,709   Copying splam.egg-info to build/bdist.linux-armv7l/wheel/splam-1.0.1-py3.9.egg-info
2023-07-30T09:23:32,722   running install_scripts
2023-07-30T09:23:32,773   creating build/bdist.linux-armv7l/wheel/splam-1.0.1.dist-info/WHEEL
2023-07-30T09:23:32,776   creating '/tmp/pip-wheel-tilin265/splam-1.0.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-07-30T09:23:33,063   adding 'splam_clean.cpython-39-arm-linux-gnueabihf.so'
2023-07-30T09:23:33,326   adding 'splam_extract.cpython-39-arm-linux-gnueabihf.so'
2023-07-30T09:23:33,336   adding 'splam/SPLAM.py'
2023-07-30T09:23:33,338   adding 'splam/__init__.py'
2023-07-30T09:23:33,344   adding 'splam/chr_size.py'
2023-07-30T09:23:33,346   adding 'splam/clean_gff.py'
2023-07-30T09:23:33,348   adding 'splam/config.py'
2023-07-30T09:23:33,350   adding 'splam/extract_gff.py'
2023-07-30T09:23:33,351   adding 'splam/header.py'
2023-07-30T09:23:33,353   adding 'splam/helper.py'
2023-07-30T09:23:33,355   adding 'splam/main.py'
2023-07-30T09:23:33,357   adding 'splam/parse.py'
2023-07-30T09:23:33,359   adding 'splam/prediction.py'
2023-07-30T09:23:33,362   adding 'splam-1.0.1.dist-info/LICENSE'
2023-07-30T09:23:33,363   adding 'splam-1.0.1.dist-info/METADATA'
2023-07-30T09:23:33,365   adding 'splam-1.0.1.dist-info/WHEEL'
2023-07-30T09:23:33,366   adding 'splam-1.0.1.dist-info/entry_points.txt'
2023-07-30T09:23:33,367   adding 'splam-1.0.1.dist-info/top_level.txt'
2023-07-30T09:23:33,368   adding 'splam-1.0.1.dist-info/RECORD'
2023-07-30T09:23:33,379   removing build/bdist.linux-armv7l/wheel
2023-07-30T09:23:33,473   Building wheel for splam (setup.py): finished with status 'done'
2023-07-30T09:23:33,485   Created wheel for splam: filename=splam-1.0.1-cp39-cp39-linux_armv7l.whl size=914781 sha256=c18773cbb40b6f9c9732a88256f613f6c52b279fcd6ab28bbafa17768ae51a09
2023-07-30T09:23:33,486   Stored in directory: /tmp/pip-ephem-wheel-cache-qduyubfw/wheels/08/ae/6c/84238c89086332d1fa5563d21f980e4251e1855618b10f9a2f
2023-07-30T09:23:33,497 Successfully built splam
2023-07-30T09:23:33,531 Removed build tracker: '/tmp/pip-build-tracker-ff0t7h9b'