2023-08-06T19:05:52,726 Created temporary directory: /tmp/pip-build-tracker-rtil25ei 2023-08-06T19:05:52,729 Initialized build tracking at /tmp/pip-build-tracker-rtil25ei 2023-08-06T19:05:52,729 Created build tracker: /tmp/pip-build-tracker-rtil25ei 2023-08-06T19:05:52,730 Entered build tracker: /tmp/pip-build-tracker-rtil25ei 2023-08-06T19:05:52,731 Created temporary directory: /tmp/pip-wheel-plpbxfsq 2023-08-06T19:05:52,739 Created temporary directory: /tmp/pip-ephem-wheel-cache-us3qjoi5 2023-08-06T19:05:52,792 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-06T19:05:52,800 2 location(s) to search for versions of haplodynamics: 2023-08-06T19:05:52,800 * https://pypi.org/simple/haplodynamics/ 2023-08-06T19:05:52,800 * https://www.piwheels.org/simple/haplodynamics/ 2023-08-06T19:05:52,801 Fetching project page and analyzing links: https://pypi.org/simple/haplodynamics/ 2023-08-06T19:05:52,802 Getting page https://pypi.org/simple/haplodynamics/ 2023-08-06T19:05:52,806 Found index url https://pypi.org/simple/ 2023-08-06T19:05:52,914 Fetched page https://pypi.org/simple/haplodynamics/ as application/vnd.pypi.simple.v1+json 2023-08-06T19:05:52,917 Found link https://files.pythonhosted.org/packages/c0/08/d635965c7ba781a404a1174dafb7b14a35f1c75d9ecc64225ec423e4f758/HaploDynamics-0.1b1.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b1 2023-08-06T19:05:52,918 Found link https://files.pythonhosted.org/packages/fe/40/a1e7f9b4d7554832086c642d44eac7d356b99466381c42475f9b95ea4259/HaploDynamics-0.1b2.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b2 2023-08-06T19:05:52,918 Found link https://files.pythonhosted.org/packages/ff/b7/ee3221356d66d5cd16d9310fc30dbb3fe4efcc4ee30b8c1e1c6acc36a58e/HaploDynamics-0.1b3.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b3 2023-08-06T19:05:52,919 Fetching project page and analyzing links: https://www.piwheels.org/simple/haplodynamics/ 2023-08-06T19:05:52,920 Getting page https://www.piwheels.org/simple/haplodynamics/ 2023-08-06T19:05:52,922 Found index url https://www.piwheels.org/simple/ 2023-08-06T19:05:53,242 Fetched page https://www.piwheels.org/simple/haplodynamics/ as text/html 2023-08-06T19:05:53,244 Skipping link: not a file: https://www.piwheels.org/simple/haplodynamics/ 2023-08-06T19:05:53,245 Skipping link: not a file: https://pypi.org/simple/haplodynamics/ 2023-08-06T19:05:53,278 Given no hashes to check 1 links for project 'haplodynamics': discarding no candidates 2023-08-06T19:05:53,308 Collecting haplodynamics==0.1b2 2023-08-06T19:05:53,313 Created temporary directory: /tmp/pip-unpack-myypoekz 2023-08-06T19:05:53,497 Downloading HaploDynamics-0.1b2.tar.gz (23 kB) 2023-08-06T19:05:53,592 Added haplodynamics==0.1b2 from https://files.pythonhosted.org/packages/fe/40/a1e7f9b4d7554832086c642d44eac7d356b99466381c42475f9b95ea4259/HaploDynamics-0.1b2.tar.gz to build tracker '/tmp/pip-build-tracker-rtil25ei' 2023-08-06T19:05:53,595 Running setup.py (path:/tmp/pip-wheel-plpbxfsq/haplodynamics_df44149fd69d409ba88ea3f2e2c5f96b/setup.py) egg_info for package haplodynamics 2023-08-06T19:05:53,597 Created temporary directory: /tmp/pip-pip-egg-info-v34g4m3c 2023-08-06T19:05:53,597 Preparing metadata (setup.py): started 2023-08-06T19:05:53,600 Running command python setup.py egg_info 2023-08-06T19:05:55,116 running egg_info 2023-08-06T19:05:55,120 creating /tmp/pip-pip-egg-info-v34g4m3c/HaploDynamics.egg-info 2023-08-06T19:05:55,185 writing /tmp/pip-pip-egg-info-v34g4m3c/HaploDynamics.egg-info/PKG-INFO 2023-08-06T19:05:55,191 writing dependency_links to /tmp/pip-pip-egg-info-v34g4m3c/HaploDynamics.egg-info/dependency_links.txt 2023-08-06T19:05:55,196 writing requirements to /tmp/pip-pip-egg-info-v34g4m3c/HaploDynamics.egg-info/requires.txt 2023-08-06T19:05:55,198 writing top-level names to /tmp/pip-pip-egg-info-v34g4m3c/HaploDynamics.egg-info/top_level.txt 2023-08-06T19:05:55,201 writing manifest file '/tmp/pip-pip-egg-info-v34g4m3c/HaploDynamics.egg-info/SOURCES.txt' 2023-08-06T19:05:55,408 reading manifest file '/tmp/pip-pip-egg-info-v34g4m3c/HaploDynamics.egg-info/SOURCES.txt' 2023-08-06T19:05:55,412 adding license file 'LICENSE' 2023-08-06T19:05:55,418 writing manifest file '/tmp/pip-pip-egg-info-v34g4m3c/HaploDynamics.egg-info/SOURCES.txt' 2023-08-06T19:05:55,421 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-08-06T19:05:55,421 !! 2023-08-06T19:05:55,422 ******************************************************************************** 2023-08-06T19:05:55,422 Usage of dash-separated 'description-file' will not be supported in future 2023-08-06T19:05:55,422 versions. Please use the underscore name 'description_file' instead. 2023-08-06T19:05:55,423 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-08-06T19:05:55,423 or your builds will no longer be supported. 2023-08-06T19:05:55,424 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-08-06T19:05:55,424 ******************************************************************************** 2023-08-06T19:05:55,425 !! 2023-08-06T19:05:55,425 opt = self.warn_dash_deprecation(opt, section) 2023-08-06T19:05:55,425 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:520: InformationOnly: Normalizing 'v0.1-beta.2' to '0.1b2' 2023-08-06T19:05:55,425 self._validate_version(self.metadata.version) 2023-08-06T19:05:55,546 Preparing metadata (setup.py): finished with status 'done' 2023-08-06T19:05:55,561 Source in /tmp/pip-wheel-plpbxfsq/haplodynamics_df44149fd69d409ba88ea3f2e2c5f96b has version 0.1b2, which satisfies requirement haplodynamics==0.1b2 from https://files.pythonhosted.org/packages/fe/40/a1e7f9b4d7554832086c642d44eac7d356b99466381c42475f9b95ea4259/HaploDynamics-0.1b2.tar.gz 2023-08-06T19:05:55,563 Removed haplodynamics==0.1b2 from https://files.pythonhosted.org/packages/fe/40/a1e7f9b4d7554832086c642d44eac7d356b99466381c42475f9b95ea4259/HaploDynamics-0.1b2.tar.gz from build tracker '/tmp/pip-build-tracker-rtil25ei' 2023-08-06T19:05:55,575 Created temporary directory: /tmp/pip-unpack-si0ztw8e 2023-08-06T19:05:55,576 Building wheels for collected packages: haplodynamics 2023-08-06T19:05:55,585 Created temporary directory: /tmp/pip-wheel-08wa5c6k 2023-08-06T19:05:55,586 Building wheel for haplodynamics (setup.py): started 2023-08-06T19:05:55,588 Destination directory: /tmp/pip-wheel-08wa5c6k 2023-08-06T19:05:55,588 Running command python setup.py bdist_wheel 2023-08-06T19:05:56,755 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-08-06T19:05:56,757 !! 2023-08-06T19:05:56,758 ******************************************************************************** 2023-08-06T19:05:56,758 Usage of dash-separated 'description-file' will not be supported in future 2023-08-06T19:05:56,759 versions. Please use the underscore name 'description_file' instead. 2023-08-06T19:05:56,759 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-08-06T19:05:56,759 or your builds will no longer be supported. 2023-08-06T19:05:56,760 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-08-06T19:05:56,760 ******************************************************************************** 2023-08-06T19:05:56,761 !! 2023-08-06T19:05:56,761 opt = self.warn_dash_deprecation(opt, section) 2023-08-06T19:05:56,973 /usr/local/lib/python3.7/dist-packages/setuptools/dist.py:520: InformationOnly: Normalizing 'v0.1-beta.2' to '0.1b2' 2023-08-06T19:05:56,973 self._validate_version(self.metadata.version) 2023-08-06T19:05:57,161 running bdist_wheel 2023-08-06T19:05:57,860 running build 2023-08-06T19:05:57,861 running build_py 2023-08-06T19:05:57,935 creating build 2023-08-06T19:05:57,936 creating build/lib 2023-08-06T19:05:57,938 creating build/lib/HaploDX 2023-08-06T19:05:57,940 copying HaploDX/__init__.py -> build/lib/HaploDX 2023-08-06T19:05:57,944 copying HaploDX/HaploDX.py -> build/lib/HaploDX 2023-08-06T19:05:57,950 creating build/lib/Framework 2023-08-06T19:05:57,952 copying Framework/__init__.py -> build/lib/Framework 2023-08-06T19:05:57,956 copying Framework/future.py -> build/lib/Framework 2023-08-06T19:05:58,035 /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-08-06T19:05:58,035 !! 2023-08-06T19:05:58,036 ******************************************************************************** 2023-08-06T19:05:58,036 Please avoid running ``setup.py`` directly. 2023-08-06T19:05:58,037 Instead, use pypa/build, pypa/installer, pypa/build or 2023-08-06T19:05:58,037 other standards-based tools. 2023-08-06T19:05:58,038 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-08-06T19:05:58,038 ******************************************************************************** 2023-08-06T19:05:58,039 !! 2023-08-06T19:05:58,039 self.initialize_options() 2023-08-06T19:05:58,101 installing to build/bdist.linux-armv7l/wheel 2023-08-06T19:05:58,101 running install 2023-08-06T19:05:58,161 running install_lib 2023-08-06T19:05:58,229 creating build/bdist.linux-armv7l 2023-08-06T19:05:58,230 creating build/bdist.linux-armv7l/wheel 2023-08-06T19:05:58,234 creating build/bdist.linux-armv7l/wheel/HaploDX 2023-08-06T19:05:58,236 copying build/lib/HaploDX/__init__.py -> build/bdist.linux-armv7l/wheel/HaploDX 2023-08-06T19:05:58,240 copying build/lib/HaploDX/HaploDX.py -> build/bdist.linux-armv7l/wheel/HaploDX 2023-08-06T19:05:58,246 creating build/bdist.linux-armv7l/wheel/Framework 2023-08-06T19:05:58,248 copying build/lib/Framework/__init__.py -> build/bdist.linux-armv7l/wheel/Framework 2023-08-06T19:05:58,252 copying build/lib/Framework/future.py -> build/bdist.linux-armv7l/wheel/Framework 2023-08-06T19:05:58,256 running install_egg_info 2023-08-06T19:05:58,418 running egg_info 2023-08-06T19:05:58,483 writing HaploDynamics.egg-info/PKG-INFO 2023-08-06T19:05:58,487 writing dependency_links to HaploDynamics.egg-info/dependency_links.txt 2023-08-06T19:05:58,492 writing requirements to HaploDynamics.egg-info/requires.txt 2023-08-06T19:05:58,495 writing top-level names to HaploDynamics.egg-info/top_level.txt 2023-08-06T19:05:58,565 reading manifest file 'HaploDynamics.egg-info/SOURCES.txt' 2023-08-06T19:05:58,569 adding license file 'LICENSE' 2023-08-06T19:05:58,574 writing manifest file 'HaploDynamics.egg-info/SOURCES.txt' 2023-08-06T19:05:58,577 Copying HaploDynamics.egg-info to build/bdist.linux-armv7l/wheel/HaploDynamics-0.1b2-py3.7.egg-info 2023-08-06T19:05:58,598 running install_scripts 2023-08-06T19:05:58,631 creating build/bdist.linux-armv7l/wheel/HaploDynamics-0.1b2.dist-info/WHEEL 2023-08-06T19:05:58,636 creating '/tmp/pip-wheel-08wa5c6k/HaploDynamics-0.1b2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-08-06T19:05:58,641 adding 'Framework/__init__.py' 2023-08-06T19:05:58,643 adding 'Framework/future.py' 2023-08-06T19:05:58,650 adding 'HaploDX/HaploDX.py' 2023-08-06T19:05:58,653 adding 'HaploDX/__init__.py' 2023-08-06T19:05:58,671 adding 'HaploDynamics-0.1b2.dist-info/LICENSE' 2023-08-06T19:05:58,675 adding 'HaploDynamics-0.1b2.dist-info/METADATA' 2023-08-06T19:05:58,677 adding 'HaploDynamics-0.1b2.dist-info/WHEEL' 2023-08-06T19:05:58,679 adding 'HaploDynamics-0.1b2.dist-info/top_level.txt' 2023-08-06T19:05:58,681 adding 'HaploDynamics-0.1b2.dist-info/RECORD' 2023-08-06T19:05:58,684 removing build/bdist.linux-armv7l/wheel 2023-08-06T19:05:58,845 Building wheel for haplodynamics (setup.py): finished with status 'done' 2023-08-06T19:05:58,852 Created wheel for haplodynamics: filename=HaploDynamics-0.1b2-py3-none-any.whl size=21831 sha256=ef2b27a3505816011c266f02c3311384eac6cdef5d9006733c49887b2d20851e 2023-08-06T19:05:58,855 Stored in directory: /tmp/pip-ephem-wheel-cache-us3qjoi5/wheels/74/1d/e2/8730788ff54c99514ad6e2ed7a3ada95fa1922bd89fdeae3cd 2023-08-06T19:05:58,890 Successfully built haplodynamics 2023-08-06T19:05:58,898 Removed build tracker: '/tmp/pip-build-tracker-rtil25ei'