2023-08-14T18:20:16,788 Created temporary directory: /tmp/pip-build-tracker-x2ipunb7 2023-08-14T18:20:16,791 Initialized build tracking at /tmp/pip-build-tracker-x2ipunb7 2023-08-14T18:20:16,792 Created build tracker: /tmp/pip-build-tracker-x2ipunb7 2023-08-14T18:20:16,792 Entered build tracker: /tmp/pip-build-tracker-x2ipunb7 2023-08-14T18:20:16,793 Created temporary directory: /tmp/pip-wheel-qjzfuvde 2023-08-14T18:20:16,802 Created temporary directory: /tmp/pip-ephem-wheel-cache-ktkingty 2023-08-14T18:20:16,853 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-08-14T18:20:16,860 2 location(s) to search for versions of haplodynamics: 2023-08-14T18:20:16,860 * https://pypi.org/simple/haplodynamics/ 2023-08-14T18:20:16,860 * https://www.piwheels.org/simple/haplodynamics/ 2023-08-14T18:20:16,862 Fetching project page and analyzing links: https://pypi.org/simple/haplodynamics/ 2023-08-14T18:20:16,863 Getting page https://pypi.org/simple/haplodynamics/ 2023-08-14T18:20:16,867 Found index url https://pypi.org/simple/ 2023-08-14T18:20:17,053 Fetched page https://pypi.org/simple/haplodynamics/ as application/vnd.pypi.simple.v1+json 2023-08-14T18:20:17,062 Found link https://files.pythonhosted.org/packages/c0/08/d635965c7ba781a404a1174dafb7b14a35f1c75d9ecc64225ec423e4f758/HaploDynamics-0.1b1.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b1 2023-08-14T18:20:17,063 Found link https://files.pythonhosted.org/packages/fe/40/a1e7f9b4d7554832086c642d44eac7d356b99466381c42475f9b95ea4259/HaploDynamics-0.1b2.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b2 2023-08-14T18:20:17,063 Found link https://files.pythonhosted.org/packages/ff/b7/ee3221356d66d5cd16d9310fc30dbb3fe4efcc4ee30b8c1e1c6acc36a58e/HaploDynamics-0.1b3.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b3 2023-08-14T18:20:17,064 Found link https://files.pythonhosted.org/packages/21/e6/544f0527a989ee9d1b64855194c3abb656f5683667df48a87f0aec8cc6c7/HaploDynamics-0.1b4.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b4 2023-08-14T18:20:17,065 Found link https://files.pythonhosted.org/packages/39/49/52a7bb0a4adff1fa4d929be05274c8c43c16060521ad5ba37d23324dd537/HaploDynamics-0.1b5.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b5 2023-08-14T18:20:17,066 Found link https://files.pythonhosted.org/packages/e6/e2/f34b1441597501d26a1578418b5f868f0ef52fd48282ea58b6dd6dd641c2/HaploDynamics-0.1b6.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b6 2023-08-14T18:20:17,066 Found link https://files.pythonhosted.org/packages/43/77/681dd636417a1a943c68a8c648c2f6e52099f25a65101103b185d9f3a12b/HaploDynamics-0.1b7.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b7 2023-08-14T18:20:17,067 Found link https://files.pythonhosted.org/packages/9b/22/8e429e0c06e4417ddcf5abc981eb55b4a02319909197029dd93991c2fc08/HaploDynamics-0.1b9.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.1b9 2023-08-14T18:20:17,068 Found link https://files.pythonhosted.org/packages/c1/59/bac0fc30fdc1ef0be43fb249c219d1523927f3d0a22f1f3074b05e25a5f2/HaploDynamics-0.2b0.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.2b0 2023-08-14T18:20:17,068 Found link https://files.pythonhosted.org/packages/c0/2f/fb18c2e91f1571468aa6d501c4d5c86179a362a0271e20c42b42dfd09cfd/HaploDynamics-0.2b1.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.2b1 2023-08-14T18:20:17,069 Found link https://files.pythonhosted.org/packages/ee/ae/795a5f70b34f7860a90439890e25d345333ba7e3d0390fde3494bba2cbc6/HaploDynamics-0.2b4.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.2b4 2023-08-14T18:20:17,070 Found link https://files.pythonhosted.org/packages/25/b2/c8acc6b86f40279f8d0c333ef4c24b1d037c4f0552546276ab146ad361a4/HaploDynamics-0.3b0.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.3b0 2023-08-14T18:20:17,070 Found link https://files.pythonhosted.org/packages/95/58/9aaf208752373ce7cda8a31a18307aba966bd94e579bff0a04e8c70c5363/HaploDynamics-0.3b1.tar.gz (from https://pypi.org/simple/haplodynamics/), version: 0.3b1 2023-08-14T18:20:17,071 Fetching project page and analyzing links: https://www.piwheels.org/simple/haplodynamics/ 2023-08-14T18:20:17,072 Getting page https://www.piwheels.org/simple/haplodynamics/ 2023-08-14T18:20:17,074 Found index url https://www.piwheels.org/simple/ 2023-08-14T18:20:17,470 Fetched page https://www.piwheels.org/simple/haplodynamics/ as text/html 2023-08-14T18:20:17,480 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.3b0-py3-none-any.whl#sha256=c416125bf7478fde0f7ca4e7f94642239bb2e7421d9a1e59264b9b1e3b81f72b (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,481 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.2b4-py3-none-any.whl#sha256=1b80fd4b6b9c6d05e51ba671fb49146d824471869764fcbffae3684356bdeeb6 (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,482 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.2b1-py3-none-any.whl#sha256=93c8cfd1679d633f20d662e300eb2b663d2cec668c3e81b6f28aa70668555b9b (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,482 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.2b0-py3-none-any.whl#sha256=1be767ca5b24256d4b3d60cb94d2f12476471a9247678aee59fb11f8ef4c6b1b (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,483 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.1b9-py3-none-any.whl#sha256=64430163f00e382b97b7b52b6d170149ae225bed01cd2338580a98980a771554 (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,483 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.1b7-py3-none-any.whl#sha256=a68cd843a7d8aa03ddd272ac346cc28cce2432dadf0d7882e864d21a5228b660 (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,484 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.1b6-py3-none-any.whl#sha256=e4b170d443c2899809f5f2c60e3b4f4ee2202c6f9a2e216d338727fc930514d6 (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,484 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.1b5-py3-none-any.whl#sha256=792dca75ab9cee89bf953de0b91467b39449cb3cd275b7a449473293b6ddd87f (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,485 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.1b4-py3-none-any.whl#sha256=56cad9cb6b6874e82a37691e3346bd42879bf06b278a4171e68531c381a1f559 (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,485 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.1b3-py3-none-any.whl#sha256=95411747bd0442ab6671be1f58937099a59b9b1cc1c67710a034014db00d7804 (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,486 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.1b2-py3-none-any.whl#sha256=ef2b27a3505816011c266f02c3311384eac6cdef5d9006733c49887b2d20851e (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,486 Skipping link: No binaries permitted for haplodynamics: https://www.piwheels.org/simple/haplodynamics/HaploDynamics-0.1b1-py3-none-any.whl#sha256=7bd0f90d034700955a128000ca5e28f0e74aa24532617ce3ceb4e67ad3a6048a (from https://www.piwheels.org/simple/haplodynamics/) 2023-08-14T18:20:17,487 Skipping link: not a file: https://www.piwheels.org/simple/haplodynamics/ 2023-08-14T18:20:17,487 Skipping link: not a file: https://pypi.org/simple/haplodynamics/ 2023-08-14T18:20:17,524 Given no hashes to check 1 links for project 'haplodynamics': discarding no candidates 2023-08-14T18:20:17,555 Collecting haplodynamics==0.3b1 2023-08-14T18:20:17,560 Created temporary directory: /tmp/pip-unpack-ng8_zxrp 2023-08-14T18:20:17,732 Downloading HaploDynamics-0.3b1.tar.gz (26 kB) 2023-08-14T18:20:17,848 Added haplodynamics==0.3b1 from https://files.pythonhosted.org/packages/95/58/9aaf208752373ce7cda8a31a18307aba966bd94e579bff0a04e8c70c5363/HaploDynamics-0.3b1.tar.gz to build tracker '/tmp/pip-build-tracker-x2ipunb7' 2023-08-14T18:20:17,853 Running setup.py (path:/tmp/pip-wheel-qjzfuvde/haplodynamics_2cf2773effbd4fb5a9174afb2fb2d348/setup.py) egg_info for package haplodynamics 2023-08-14T18:20:17,854 Created temporary directory: /tmp/pip-pip-egg-info-hsmg8jri 2023-08-14T18:20:17,855 Preparing metadata (setup.py): started 2023-08-14T18:20:17,857 Running command python setup.py egg_info 2023-08-14T18:20:19,381 running egg_info 2023-08-14T18:20:19,384 creating /tmp/pip-pip-egg-info-hsmg8jri/HaploDynamics.egg-info 2023-08-14T18:20:19,453 writing /tmp/pip-pip-egg-info-hsmg8jri/HaploDynamics.egg-info/PKG-INFO 2023-08-14T18:20:19,458 writing dependency_links to /tmp/pip-pip-egg-info-hsmg8jri/HaploDynamics.egg-info/dependency_links.txt 2023-08-14T18:20:19,463 writing requirements to /tmp/pip-pip-egg-info-hsmg8jri/HaploDynamics.egg-info/requires.txt 2023-08-14T18:20:19,465 writing top-level names to /tmp/pip-pip-egg-info-hsmg8jri/HaploDynamics.egg-info/top_level.txt 2023-08-14T18:20:19,468 writing manifest file '/tmp/pip-pip-egg-info-hsmg8jri/HaploDynamics.egg-info/SOURCES.txt' 2023-08-14T18:20:19,683 reading manifest file '/tmp/pip-pip-egg-info-hsmg8jri/HaploDynamics.egg-info/SOURCES.txt' 2023-08-14T18:20:19,686 adding license file 'LICENSE' 2023-08-14T18:20:19,691 writing manifest file '/tmp/pip-pip-egg-info-hsmg8jri/HaploDynamics.egg-info/SOURCES.txt' 2023-08-14T18:20:19,693 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-08-14T18:20:19,693 !! 2023-08-14T18:20:19,694 ******************************************************************************** 2023-08-14T18:20:19,694 Usage of dash-separated 'description-file' will not be supported in future 2023-08-14T18:20:19,695 versions. Please use the underscore name 'description_file' instead. 2023-08-14T18:20:19,695 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-08-14T18:20:19,696 or your builds will no longer be supported. 2023-08-14T18:20:19,697 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-08-14T18:20:19,697 ******************************************************************************** 2023-08-14T18:20:19,698 !! 2023-08-14T18:20:19,699 opt = self.warn_dash_deprecation(opt, section) 2023-08-14T18:20:19,699 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/dist.py:520: InformationOnly: Normalizing 'v0.3-beta.1' to '0.3b1' 2023-08-14T18:20:19,700 self._validate_version(self.metadata.version) 2023-08-14T18:20:19,814 Preparing metadata (setup.py): finished with status 'done' 2023-08-14T18:20:19,828 Source in /tmp/pip-wheel-qjzfuvde/haplodynamics_2cf2773effbd4fb5a9174afb2fb2d348 has version 0.3b1, which satisfies requirement haplodynamics==0.3b1 from https://files.pythonhosted.org/packages/95/58/9aaf208752373ce7cda8a31a18307aba966bd94e579bff0a04e8c70c5363/HaploDynamics-0.3b1.tar.gz 2023-08-14T18:20:19,830 Removed haplodynamics==0.3b1 from https://files.pythonhosted.org/packages/95/58/9aaf208752373ce7cda8a31a18307aba966bd94e579bff0a04e8c70c5363/HaploDynamics-0.3b1.tar.gz from build tracker '/tmp/pip-build-tracker-x2ipunb7' 2023-08-14T18:20:19,843 Created temporary directory: /tmp/pip-unpack-gl7w8uhv 2023-08-14T18:20:19,844 Building wheels for collected packages: haplodynamics 2023-08-14T18:20:19,853 Created temporary directory: /tmp/pip-wheel-7sqb_b2q 2023-08-14T18:20:19,854 Building wheel for haplodynamics (setup.py): started 2023-08-14T18:20:19,856 Destination directory: /tmp/pip-wheel-7sqb_b2q 2023-08-14T18:20:19,856 Running command python setup.py bdist_wheel 2023-08-14T18:20:21,032 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/dist.py:755: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-08-14T18:20:21,033 !! 2023-08-14T18:20:21,034 ******************************************************************************** 2023-08-14T18:20:21,035 Usage of dash-separated 'description-file' will not be supported in future 2023-08-14T18:20:21,035 versions. Please use the underscore name 'description_file' instead. 2023-08-14T18:20:21,036 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-08-14T18:20:21,036 or your builds will no longer be supported. 2023-08-14T18:20:21,036 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-08-14T18:20:21,037 ******************************************************************************** 2023-08-14T18:20:21,037 !! 2023-08-14T18:20:21,038 opt = self.warn_dash_deprecation(opt, section) 2023-08-14T18:20:21,259 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/dist.py:520: InformationOnly: Normalizing 'v0.3-beta.1' to '0.3b1' 2023-08-14T18:20:21,260 self._validate_version(self.metadata.version) 2023-08-14T18:20:21,450 running bdist_wheel 2023-08-14T18:20:22,174 running build 2023-08-14T18:20:22,174 running build_py 2023-08-14T18:20:22,254 creating build 2023-08-14T18:20:22,254 creating build/lib 2023-08-14T18:20:22,256 creating build/lib/HaploDynamics 2023-08-14T18:20:22,258 copying HaploDynamics/__init__.py -> build/lib/HaploDynamics 2023-08-14T18:20:22,264 creating build/lib/HaploDynamics/HaploDX 2023-08-14T18:20:22,265 copying HaploDynamics/HaploDX/__init__.py -> build/lib/HaploDynamics/HaploDX 2023-08-14T18:20:22,269 copying HaploDynamics/HaploDX/HaploDX.py -> build/lib/HaploDynamics/HaploDX 2023-08-14T18:20:22,276 creating build/lib/HaploDynamics/Framework 2023-08-14T18:20:22,278 copying HaploDynamics/Framework/multiproc.py -> build/lib/HaploDynamics/Framework 2023-08-14T18:20:22,282 copying HaploDynamics/Framework/__init__.py -> build/lib/HaploDynamics/Framework 2023-08-14T18:20:22,287 creating build/lib/HaploDynamics/utils 2023-08-14T18:20:22,289 copying HaploDynamics/utils/load.py -> build/lib/HaploDynamics/utils 2023-08-14T18:20:22,293 copying HaploDynamics/utils/__init__.py -> build/lib/HaploDynamics/utils 2023-08-14T18:20:22,376 /home/piwheels/.local/lib/python3.7/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-08-14T18:20:22,377 !! 2023-08-14T18:20:22,378 ******************************************************************************** 2023-08-14T18:20:22,378 Please avoid running ``setup.py`` directly. 2023-08-14T18:20:22,378 Instead, use pypa/build, pypa/installer, pypa/build or 2023-08-14T18:20:22,379 other standards-based tools. 2023-08-14T18:20:22,380 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-08-14T18:20:22,380 ******************************************************************************** 2023-08-14T18:20:22,381 !! 2023-08-14T18:20:22,381 self.initialize_options() 2023-08-14T18:20:22,447 installing to build/bdist.linux-armv7l/wheel 2023-08-14T18:20:22,447 running install 2023-08-14T18:20:22,508 running install_lib 2023-08-14T18:20:22,580 creating build/bdist.linux-armv7l 2023-08-14T18:20:22,581 creating build/bdist.linux-armv7l/wheel 2023-08-14T18:20:22,585 creating build/bdist.linux-armv7l/wheel/HaploDynamics 2023-08-14T18:20:22,588 creating build/bdist.linux-armv7l/wheel/HaploDynamics/HaploDX 2023-08-14T18:20:22,590 copying build/lib/HaploDynamics/HaploDX/__init__.py -> build/bdist.linux-armv7l/wheel/HaploDynamics/HaploDX 2023-08-14T18:20:22,594 copying build/lib/HaploDynamics/HaploDX/HaploDX.py -> build/bdist.linux-armv7l/wheel/HaploDynamics/HaploDX 2023-08-14T18:20:22,601 creating build/bdist.linux-armv7l/wheel/HaploDynamics/Framework 2023-08-14T18:20:22,602 copying build/lib/HaploDynamics/Framework/multiproc.py -> build/bdist.linux-armv7l/wheel/HaploDynamics/Framework 2023-08-14T18:20:22,606 copying build/lib/HaploDynamics/Framework/__init__.py -> build/bdist.linux-armv7l/wheel/HaploDynamics/Framework 2023-08-14T18:20:22,611 creating build/bdist.linux-armv7l/wheel/HaploDynamics/utils 2023-08-14T18:20:22,613 copying build/lib/HaploDynamics/utils/load.py -> build/bdist.linux-armv7l/wheel/HaploDynamics/utils 2023-08-14T18:20:22,617 copying build/lib/HaploDynamics/utils/__init__.py -> build/bdist.linux-armv7l/wheel/HaploDynamics/utils 2023-08-14T18:20:22,620 copying build/lib/HaploDynamics/__init__.py -> build/bdist.linux-armv7l/wheel/HaploDynamics 2023-08-14T18:20:22,624 running install_egg_info 2023-08-14T18:20:22,790 running egg_info 2023-08-14T18:20:22,884 writing HaploDynamics.egg-info/PKG-INFO 2023-08-14T18:20:23,168 writing dependency_links to HaploDynamics.egg-info/dependency_links.txt 2023-08-14T18:20:23,173 writing requirements to HaploDynamics.egg-info/requires.txt 2023-08-14T18:20:23,176 writing top-level names to HaploDynamics.egg-info/top_level.txt 2023-08-14T18:20:23,256 reading manifest file 'HaploDynamics.egg-info/SOURCES.txt' 2023-08-14T18:20:23,260 adding license file 'LICENSE' 2023-08-14T18:20:23,266 writing manifest file 'HaploDynamics.egg-info/SOURCES.txt' 2023-08-14T18:20:23,269 Copying HaploDynamics.egg-info to build/bdist.linux-armv7l/wheel/HaploDynamics-0.3b1-py3.7.egg-info 2023-08-14T18:20:23,294 running install_scripts 2023-08-14T18:20:23,335 creating build/bdist.linux-armv7l/wheel/HaploDynamics-0.3b1.dist-info/WHEEL 2023-08-14T18:20:23,342 creating '/tmp/pip-wheel-7sqb_b2q/HaploDynamics-0.3b1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-08-14T18:20:23,348 adding 'HaploDynamics/__init__.py' 2023-08-14T18:20:23,356 adding 'HaploDynamics/Framework/__init__.py' 2023-08-14T18:20:23,360 adding 'HaploDynamics/Framework/multiproc.py' 2023-08-14T18:20:23,368 adding 'HaploDynamics/HaploDX/HaploDX.py' 2023-08-14T18:20:23,372 adding 'HaploDynamics/HaploDX/__init__.py' 2023-08-14T18:20:23,376 adding 'HaploDynamics/utils/__init__.py' 2023-08-14T18:20:23,379 adding 'HaploDynamics/utils/load.py' 2023-08-14T18:20:23,398 adding 'HaploDynamics-0.3b1.dist-info/LICENSE' 2023-08-14T18:20:23,403 adding 'HaploDynamics-0.3b1.dist-info/METADATA' 2023-08-14T18:20:23,405 adding 'HaploDynamics-0.3b1.dist-info/WHEEL' 2023-08-14T18:20:23,408 adding 'HaploDynamics-0.3b1.dist-info/top_level.txt' 2023-08-14T18:20:23,410 adding 'HaploDynamics-0.3b1.dist-info/RECORD' 2023-08-14T18:20:23,413 removing build/bdist.linux-armv7l/wheel 2023-08-14T18:20:23,584 Building wheel for haplodynamics (setup.py): finished with status 'done' 2023-08-14T18:20:23,592 Created wheel for haplodynamics: filename=HaploDynamics-0.3b1-py3-none-any.whl size=24939 sha256=a77d76e0c077069d2632767af370b72fb08176a51b865030070fb478a1ca7999 2023-08-14T18:20:23,594 Stored in directory: /tmp/pip-ephem-wheel-cache-ktkingty/wheels/ed/0e/08/7225123d2e30dbbeedb6108b3a783550a64a74c994407e4ece 2023-08-14T18:20:23,628 Successfully built haplodynamics 2023-08-14T18:20:23,636 Removed build tracker: '/tmp/pip-build-tracker-x2ipunb7'