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https://pypi.org/simple/mdanalysistests/ 2023-08-16T00:02:51,849 Found index url https://pypi.org/simple/ 2023-08-16T00:02:51,901 Fetched page https://pypi.org/simple/mdanalysistests/ as application/vnd.pypi.simple.v1+json 2023-08-16T00:02:51,908 Found link https://files.pythonhosted.org/packages/e1/0b/ba087b7ce327902c14b36e29a4e9573bce8ec6bfb5eb122c1c26a3c5a4f6/MDAnalysisTests-0.7.6.tar.gz (from https://pypi.org/simple/mdanalysistests/), version: 0.7.6 2023-08-16T00:02:51,909 Found link https://files.pythonhosted.org/packages/6d/6b/d3ef91e800fc645610db1f7e06640449e530b0e6601cd13008aecca9cb32/MDAnalysisTests-0.8.0rc2.tar.gz (from https://pypi.org/simple/mdanalysistests/), version: 0.8.0rc2 2023-08-16T00:02:51,909 Found link https://files.pythonhosted.org/packages/09/ba/1e5805959715bddff579e1321242e43d0fec03afb451f6d03fc3526e908f/MDAnalysisTests-0.8.0rc4.tar.gz (from https://pypi.org/simple/mdanalysistests/), version: 0.8.0rc4 2023-08-16T00:02:51,909 Found link 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(requires-python:>=3.9), version: 2.6.0 2023-08-16T00:02:51,922 Fetching project page and analyzing links: https://www.piwheels.org/simple/mdanalysistests/ 2023-08-16T00:02:51,922 Getting page https://www.piwheels.org/simple/mdanalysistests/ 2023-08-16T00:02:51,923 Found index url https://www.piwheels.org/simple/ 2023-08-16T00:02:52,103 Fetched page https://www.piwheels.org/simple/mdanalysistests/ as text/html 2023-08-16T00:02:52,113 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-2.5.0-py3-none-any.whl#sha256=9878e6ef03547abf6d6283af6cbf65d8f2668393dfe7a2b8fc1edd2842ee5c13 (from https://www.piwheels.org/simple/mdanalysistests/) (requires-python:>=3.9) 2023-08-16T00:02:52,114 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-2.4.3-py3-none-any.whl#sha256=be20feb61fb027e46ae87f57b7f13b65f266df01ca8121153224e7c17edfb190 (from 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https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.1-py3-none-any.whl#sha256=56eb9fc24fcd37e2863781cfa680aff9a933cbe39cab2e012532fd7423843c58 (from https://www.piwheels.org/simple/mdanalysistests/) 2023-08-16T00:02:52,120 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.1rc1-py3-none-any.whl#sha256=122b81d37c2a8a3c39c5dd339cdd99e2d997af844460061fbfb37d24f8eb8e4d (from https://www.piwheels.org/simple/mdanalysistests/) 2023-08-16T00:02:52,120 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.0-py3-none-any.whl#sha256=dd67da3be221e40941dd60ab6f1411d8bcb98c05637a32aa51a9d8e5f4b59f89 (from https://www.piwheels.org/simple/mdanalysistests/) 2023-08-16T00:02:52,120 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.0rc4-py3-none-any.whl#sha256=837d4981dad2f2cb24179645cb8af06ac71607f8c9ea9653d2b2994c34bedb6e (from https://www.piwheels.org/simple/mdanalysistests/) 2023-08-16T00:02:52,121 Skipping link: No binaries permitted for mdanalysistests: https://www.piwheels.org/simple/mdanalysistests/MDAnalysisTests-0.8.0rc2-py3-none-any.whl#sha256=92cf87faf12f415e429b98c9a3aaf7d978ba12e0fa060eed3488232396a18af3 (from https://www.piwheels.org/simple/mdanalysistests/) 2023-08-16T00:02:52,121 Skipping link: not a file: https://www.piwheels.org/simple/mdanalysistests/ 2023-08-16T00:02:52,121 Skipping link: not a file: https://pypi.org/simple/mdanalysistests/ 2023-08-16T00:02:52,144 Given no hashes to check 1 links for project 'mdanalysistests': discarding no candidates 2023-08-16T00:02:52,161 Collecting mdanalysistests==2.6.0 2023-08-16T00:02:52,163 Created temporary directory: /tmp/pip-unpack-yth_edl8 2023-08-16T00:02:52,546 Downloading MDAnalysisTests-2.6.0.tar.gz (55.4 MB) 2023-08-16T00:03:11,595 Added mdanalysistests==2.6.0 from https://files.pythonhosted.org/packages/bb/fb/cada869fc9ba3198ffdced0ab7547804ce01697bc53f6939894fffa4cef2/MDAnalysisTests-2.6.0.tar.gz to build tracker '/tmp/pip-build-tracker-bk3ic37t' 2023-08-16T00:03:11,629 Running setup.py (path:/tmp/pip-wheel-ohukpmqe/mdanalysistests_3f2748bc27e3422eaab19b44b0db59a5/setup.py) egg_info for package mdanalysistests 2023-08-16T00:03:11,630 Created temporary directory: /tmp/pip-pip-egg-info-zzuxrqox 2023-08-16T00:03:11,630 Preparing metadata (setup.py): started 2023-08-16T00:03:11,632 Running command python setup.py egg_info 2023-08-16T00:03:12,973 running egg_info 2023-08-16T00:03:12,975 creating /tmp/pip-pip-egg-info-zzuxrqox/MDAnalysisTests.egg-info 2023-08-16T00:03:13,005 writing /tmp/pip-pip-egg-info-zzuxrqox/MDAnalysisTests.egg-info/PKG-INFO 2023-08-16T00:03:13,009 writing dependency_links to /tmp/pip-pip-egg-info-zzuxrqox/MDAnalysisTests.egg-info/dependency_links.txt 2023-08-16T00:03:13,012 writing requirements to /tmp/pip-pip-egg-info-zzuxrqox/MDAnalysisTests.egg-info/requires.txt 2023-08-16T00:03:13,014 writing top-level names to /tmp/pip-pip-egg-info-zzuxrqox/MDAnalysisTests.egg-info/top_level.txt 2023-08-16T00:03:13,016 writing manifest file '/tmp/pip-pip-egg-info-zzuxrqox/MDAnalysisTests.egg-info/SOURCES.txt' 2023-08-16T00:03:13,225 reading manifest file '/tmp/pip-pip-egg-info-zzuxrqox/MDAnalysisTests.egg-info/SOURCES.txt' 2023-08-16T00:03:13,226 reading manifest template 'MANIFEST.in' 2023-08-16T00:03:13,229 warning: no files found matching 'TODO' 2023-08-16T00:03:13,229 warning: no files found matching 'SUMMARY.txt' 2023-08-16T00:03:13,302 warning: no previously-included files matching '*~' found anywhere in distribution 2023-08-16T00:03:13,304 warning: no previously-included files matching '*.pkl' found anywhere in distribution 2023-08-16T00:03:13,304 adding license file 'LICENSE' 2023-08-16T00:03:13,305 adding license file 'AUTHORS' 2023-08-16T00:03:13,326 writing manifest file '/tmp/pip-pip-egg-info-zzuxrqox/MDAnalysisTests.egg-info/SOURCES.txt' 2023-08-16T00:03:13,387 Preparing metadata (setup.py): finished with status 'done' 2023-08-16T00:03:13,394 Source in /tmp/pip-wheel-ohukpmqe/mdanalysistests_3f2748bc27e3422eaab19b44b0db59a5 has version 2.6.0, which satisfies requirement mdanalysistests==2.6.0 from https://files.pythonhosted.org/packages/bb/fb/cada869fc9ba3198ffdced0ab7547804ce01697bc53f6939894fffa4cef2/MDAnalysisTests-2.6.0.tar.gz 2023-08-16T00:03:13,395 Removed mdanalysistests==2.6.0 from https://files.pythonhosted.org/packages/bb/fb/cada869fc9ba3198ffdced0ab7547804ce01697bc53f6939894fffa4cef2/MDAnalysisTests-2.6.0.tar.gz from build tracker '/tmp/pip-build-tracker-bk3ic37t' 2023-08-16T00:03:13,404 Created temporary directory: /tmp/pip-unpack-0woyxabd 2023-08-16T00:03:13,405 Building wheels for collected packages: mdanalysistests 2023-08-16T00:03:13,410 Created temporary directory: /tmp/pip-wheel-eaqegcsu 2023-08-16T00:03:13,410 Building wheel for mdanalysistests (setup.py): started 2023-08-16T00:03:13,411 Destination directory: /tmp/pip-wheel-eaqegcsu 2023-08-16T00:03:13,411 Running command python setup.py bdist_wheel 2023-08-16T00:03:16,824 running bdist_wheel 2023-08-16T00:03:17,136 running build 2023-08-16T00:03:17,137 running build_py 2023-08-16T00:03:17,166 creating build 2023-08-16T00:03:17,167 creating build/lib 2023-08-16T00:03:17,168 creating build/lib/MDAnalysisTests 2023-08-16T00:03:17,169 copying MDAnalysisTests/datafiles.py -> build/lib/MDAnalysisTests 2023-08-16T00:03:17,172 copying MDAnalysisTests/test_api.py -> build/lib/MDAnalysisTests 2023-08-16T00:03:17,174 copying MDAnalysisTests/__init__.py -> build/lib/MDAnalysisTests 2023-08-16T00:03:17,176 copying MDAnalysisTests/util.py -> build/lib/MDAnalysisTests 2023-08-16T00:03:17,178 copying MDAnalysisTests/dummy.py -> build/lib/MDAnalysisTests 2023-08-16T00:03:17,182 creating build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,183 copying MDAnalysisTests/utils/test_authors.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,185 copying MDAnalysisTests/utils/test_failure.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,187 copying MDAnalysisTests/utils/test_transformations.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,190 copying MDAnalysisTests/utils/test_imports.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,192 copying MDAnalysisTests/utils/test_streamio.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,195 copying MDAnalysisTests/utils/test_selections.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,197 copying MDAnalysisTests/utils/test_persistence.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,199 copying MDAnalysisTests/utils/test_meta.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,201 copying MDAnalysisTests/utils/test_qcprot.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,203 copying MDAnalysisTests/utils/test_units.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,205 copying MDAnalysisTests/utils/test_pickleio.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,208 copying MDAnalysisTests/utils/test_duecredit.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,210 copying MDAnalysisTests/utils/test_datafiles.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,212 copying MDAnalysisTests/utils/__init__.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,213 copying MDAnalysisTests/utils/test_log.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,215 copying MDAnalysisTests/utils/test_modelling.py -> build/lib/MDAnalysisTests/utils 2023-08-16T00:03:17,218 creating build/lib/MDAnalysisTests/import 2023-08-16T00:03:17,220 copying MDAnalysisTests/import/test_import.py -> build/lib/MDAnalysisTests/import 2023-08-16T00:03:17,222 copying MDAnalysisTests/import/fork_called.py -> build/lib/MDAnalysisTests/import 2023-08-16T00:03:17,223 copying MDAnalysisTests/import/__init__.py -> build/lib/MDAnalysisTests/import 2023-08-16T00:03:17,226 creating build/lib/MDAnalysisTests/visualization 2023-08-16T00:03:17,227 copying MDAnalysisTests/visualization/__init__.py -> build/lib/MDAnalysisTests/visualization 2023-08-16T00:03:17,229 copying MDAnalysisTests/visualization/test_streamlines.py -> build/lib/MDAnalysisTests/visualization 2023-08-16T00:03:17,231 creating build/lib/MDAnalysisTests/converters 2023-08-16T00:03:17,232 copying MDAnalysisTests/converters/test_parmed_parser.py -> build/lib/MDAnalysisTests/converters 2023-08-16T00:03:17,235 copying MDAnalysisTests/converters/test_openmm_parser.py -> build/lib/MDAnalysisTests/converters 2023-08-16T00:03:17,238 copying MDAnalysisTests/converters/test_rdkit_parser.py -> build/lib/MDAnalysisTests/converters 2023-08-16T00:03:17,240 copying MDAnalysisTests/converters/test_openmm.py -> build/lib/MDAnalysisTests/converters 2023-08-16T00:03:17,242 copying MDAnalysisTests/converters/test_rdkit.py -> build/lib/MDAnalysisTests/converters 2023-08-16T00:03:17,244 copying MDAnalysisTests/converters/__init__.py -> build/lib/MDAnalysisTests/converters 2023-08-16T00:03:17,246 copying MDAnalysisTests/converters/test_parmed.py -> build/lib/MDAnalysisTests/converters 2023-08-16T00:03:17,249 creating build/lib/MDAnalysisTests/auxiliary 2023-08-16T00:03:17,250 copying MDAnalysisTests/auxiliary/test_xvg.py -> build/lib/MDAnalysisTests/auxiliary 2023-08-16T00:03:17,252 copying MDAnalysisTests/auxiliary/test_edr.py -> build/lib/MDAnalysisTests/auxiliary 2023-08-16T00:03:17,254 copying MDAnalysisTests/auxiliary/base.py -> build/lib/MDAnalysisTests/auxiliary 2023-08-16T00:03:17,257 copying MDAnalysisTests/auxiliary/test_core.py -> build/lib/MDAnalysisTests/auxiliary 2023-08-16T00:03:17,258 copying MDAnalysisTests/auxiliary/__init__.py -> build/lib/MDAnalysisTests/auxiliary 2023-08-16T00:03:17,261 creating build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,262 copying MDAnalysisTests/coordinates/test_reader_api.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,265 copying MDAnalysisTests/coordinates/test_lammps.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,267 copying MDAnalysisTests/coordinates/test_windows.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,269 copying MDAnalysisTests/coordinates/test_pdbqt.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,271 copying MDAnalysisTests/coordinates/test_tng.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,273 copying MDAnalysisTests/coordinates/test_pqr.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,275 copying MDAnalysisTests/coordinates/test_gro.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,278 copying MDAnalysisTests/coordinates/test_dcd.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,280 copying MDAnalysisTests/coordinates/test_copying.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,282 copying MDAnalysisTests/coordinates/reference.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,284 copying MDAnalysisTests/coordinates/test_mmtf.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,286 copying MDAnalysisTests/coordinates/test_crd.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,288 copying MDAnalysisTests/coordinates/test_timestep_api.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,291 copying MDAnalysisTests/coordinates/test_memory.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,293 copying MDAnalysisTests/coordinates/base.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,296 copying MDAnalysisTests/coordinates/test_h5md.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,299 copying MDAnalysisTests/coordinates/test_pdb.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,301 copying MDAnalysisTests/coordinates/test_chemfiles.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,303 copying MDAnalysisTests/coordinates/test_amber_inpcrd.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,305 copying MDAnalysisTests/coordinates/test_writer_registration.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,307 copying MDAnalysisTests/coordinates/test_trz.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,309 copying MDAnalysisTests/coordinates/test_gsd.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,310 copying MDAnalysisTests/coordinates/test_netcdf.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,313 copying MDAnalysisTests/coordinates/test_null.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,315 copying MDAnalysisTests/coordinates/test_txyz.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,317 copying MDAnalysisTests/coordinates/test_gms.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,318 copying MDAnalysisTests/coordinates/test_writer_api.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,320 copying MDAnalysisTests/coordinates/test_dlpoly.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,322 copying MDAnalysisTests/coordinates/test_xdr.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,325 copying MDAnalysisTests/coordinates/__init__.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,327 copying MDAnalysisTests/coordinates/test_mol2.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,329 copying MDAnalysisTests/coordinates/test_xyz.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,331 copying MDAnalysisTests/coordinates/test_trj.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,333 copying MDAnalysisTests/coordinates/test_namdbin.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,335 copying MDAnalysisTests/coordinates/test_fhiaims.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,337 copying MDAnalysisTests/coordinates/test_chainreader.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,339 copying MDAnalysisTests/coordinates/test_dms.py -> build/lib/MDAnalysisTests/coordinates 2023-08-16T00:03:17,342 creating build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,343 copying MDAnalysisTests/data/__init__.py -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,347 creating build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,347 copying MDAnalysisTests/analysis/test_data.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,349 copying MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,351 copying MDAnalysisTests/analysis/test_bat.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,353 copying MDAnalysisTests/analysis/test_dielectric.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,355 copying MDAnalysisTests/analysis/test_rms.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,357 copying MDAnalysisTests/analysis/test_atomicdistances.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,359 copying MDAnalysisTests/analysis/test_psa.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,362 copying MDAnalysisTests/analysis/test_diffusionmap.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,364 copying MDAnalysisTests/analysis/test_encore.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,367 copying MDAnalysisTests/analysis/test_wbridge.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,370 copying MDAnalysisTests/analysis/test_rdf_s.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,372 copying MDAnalysisTests/analysis/test_contacts.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,375 copying MDAnalysisTests/analysis/test_rdf.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,377 copying MDAnalysisTests/analysis/test_distances.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,379 copying MDAnalysisTests/analysis/test_helix_analysis.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,381 copying MDAnalysisTests/analysis/test_hole2.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,384 copying MDAnalysisTests/analysis/test_nuclinfo.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,386 copying MDAnalysisTests/analysis/test_waterdynamics.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,388 copying MDAnalysisTests/analysis/test_density.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,390 copying MDAnalysisTests/analysis/test_base.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,392 copying MDAnalysisTests/analysis/test_pca.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,395 copying MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,397 copying MDAnalysisTests/analysis/test_align.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,400 copying MDAnalysisTests/analysis/__init__.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,401 copying MDAnalysisTests/analysis/test_dihedrals.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,403 copying MDAnalysisTests/analysis/test_nucleicacids.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,405 copying MDAnalysisTests/analysis/test_leaflet.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,407 copying MDAnalysisTests/analysis/test_lineardensity.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,410 copying MDAnalysisTests/analysis/test_persistencelength.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,412 copying MDAnalysisTests/analysis/test_msd.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,414 copying MDAnalysisTests/analysis/test_gnm.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,416 copying MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py -> build/lib/MDAnalysisTests/analysis 2023-08-16T00:03:17,419 creating build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,420 copying MDAnalysisTests/topology/test_pdbqt.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,422 copying MDAnalysisTests/topology/test_pqr.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,424 copying MDAnalysisTests/topology/test_gro.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,426 copying MDAnalysisTests/topology/test_hoomdxml.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,428 copying MDAnalysisTests/topology/test_mmtf.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,430 copying MDAnalysisTests/topology/test_crd.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,432 copying MDAnalysisTests/topology/base.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,434 copying MDAnalysisTests/topology/test_pdb.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,436 copying MDAnalysisTests/topology/test_top.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,439 copying MDAnalysisTests/topology/test_xpdb.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,440 copying MDAnalysisTests/topology/test_gsd.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,442 copying MDAnalysisTests/topology/test_txyz.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,444 copying MDAnalysisTests/topology/test_psf.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,446 copying MDAnalysisTests/topology/test_gms.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,448 copying MDAnalysisTests/topology/test_tprparser.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,450 copying MDAnalysisTests/topology/test_topology_base.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,452 copying MDAnalysisTests/topology/test_dlpoly.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,454 copying MDAnalysisTests/topology/__init__.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,455 copying MDAnalysisTests/topology/test_mol2.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,457 copying MDAnalysisTests/topology/test_guessers.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,459 copying MDAnalysisTests/topology/test_minimal.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,461 copying MDAnalysisTests/topology/test_itp.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,464 copying MDAnalysisTests/topology/test_xyz.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,466 copying MDAnalysisTests/topology/test_lammpsdata.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,468 copying MDAnalysisTests/topology/test_altloc.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,470 copying MDAnalysisTests/topology/test_fhiaims.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,472 copying MDAnalysisTests/topology/test_dms.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,474 copying MDAnalysisTests/topology/test_topology_str_types.py -> build/lib/MDAnalysisTests/topology 2023-08-16T00:03:17,477 creating build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,478 copying MDAnalysisTests/lib/test_distances.py -> build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,482 copying MDAnalysisTests/lib/test_nsgrid.py -> build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,485 copying MDAnalysisTests/lib/test_augment.py -> build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,487 copying MDAnalysisTests/lib/test_pkdtree.py -> build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,489 copying MDAnalysisTests/lib/test_cutil.py -> build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,491 copying MDAnalysisTests/lib/__init__.py -> build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,493 copying MDAnalysisTests/lib/test_util.py -> build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,497 copying MDAnalysisTests/lib/test_log.py -> build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,499 copying MDAnalysisTests/lib/test_neighborsearch.py -> build/lib/MDAnalysisTests/lib 2023-08-16T00:03:17,503 creating build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,504 copying MDAnalysisTests/core/test_accessors.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,506 copying MDAnalysisTests/core/test_atom.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,508 copying MDAnalysisTests/core/test_atomselections.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,511 copying MDAnalysisTests/core/test_copying.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,514 copying MDAnalysisTests/core/test_unwrap.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,517 copying MDAnalysisTests/core/test_fragments.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,519 copying MDAnalysisTests/core/test_requires.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,521 copying MDAnalysisTests/core/test_atomgroup.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,525 copying MDAnalysisTests/core/test_universe.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,528 copying MDAnalysisTests/core/test_topologyobjects.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,531 copying MDAnalysisTests/core/test_accumulate.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,534 copying MDAnalysisTests/core/test_segment.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,536 copying MDAnalysisTests/core/test_group_traj_access.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,539 copying MDAnalysisTests/core/test_updating_atomgroup.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,541 copying MDAnalysisTests/core/__init__.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,543 copying MDAnalysisTests/core/test_segmentgroup.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,545 copying MDAnalysisTests/core/test_residue.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,547 copying MDAnalysisTests/core/test_topologyattrs.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,550 copying MDAnalysisTests/core/test_groups.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,554 copying MDAnalysisTests/core/test_wrap.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,556 copying MDAnalysisTests/core/util.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,559 copying MDAnalysisTests/core/test_topology.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,562 copying MDAnalysisTests/core/test_index_dtype.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,564 copying MDAnalysisTests/core/test_residuegroup.py -> build/lib/MDAnalysisTests/core 2023-08-16T00:03:17,567 creating build/lib/MDAnalysisTests/formats 2023-08-16T00:03:17,568 copying MDAnalysisTests/formats/test_libdcd.py -> build/lib/MDAnalysisTests/formats 2023-08-16T00:03:17,571 copying MDAnalysisTests/formats/test_libmdaxdr.py -> build/lib/MDAnalysisTests/formats 2023-08-16T00:03:17,574 copying MDAnalysisTests/formats/__init__.py -> build/lib/MDAnalysisTests/formats 2023-08-16T00:03:17,576 creating build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,577 copying MDAnalysisTests/transformations/test_translate.py -> build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,580 copying MDAnalysisTests/transformations/test_nojump.py -> build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,582 copying MDAnalysisTests/transformations/test_base.py -> build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,584 copying MDAnalysisTests/transformations/test_fit.py -> build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,587 copying MDAnalysisTests/transformations/test_boxdimensions.py -> build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,589 copying MDAnalysisTests/transformations/__init__.py -> build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,591 copying MDAnalysisTests/transformations/test_rotate.py -> build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,594 copying MDAnalysisTests/transformations/test_wrap.py -> build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,596 copying MDAnalysisTests/transformations/test_positionaveraging.py -> build/lib/MDAnalysisTests/transformations 2023-08-16T00:03:17,690 copying MDAnalysisTests/data/watdyn.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,693 copying MDAnalysisTests/data/trz_psf.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,708 copying MDAnalysisTests/data/namd_cgenff.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,712 copying MDAnalysisTests/data/adk_closed_NAMD.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,730 copying MDAnalysisTests/data/adk_notop_BAD.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,737 copying MDAnalysisTests/data/parmed_ala3.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,739 copying MDAnalysisTests/data/tip125_tric_C36.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,742 copying MDAnalysisTests/data/2r9r-1b.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,748 copying MDAnalysisTests/data/SiN_tric_namd.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,760 copying MDAnalysisTests/data/nosegid.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,762 copying MDAnalysisTests/data/adk_notop.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,769 copying MDAnalysisTests/data/adk.psf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,785 copying MDAnalysisTests/data/empty.dcd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,787 copying MDAnalysisTests/data/SiN_tric_namd.dcd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,790 copying MDAnalysisTests/data/tip125_tric_C36.dcd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,794 copying MDAnalysisTests/data/adk_dims2.dcd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,852 copying MDAnalysisTests/data/adk_dims.dcd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,910 copying MDAnalysisTests/data/watdyn.dcd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,913 copying MDAnalysisTests/data/adk_gbis_tmd-fast1_NAMD.dcd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,972 copying MDAnalysisTests/data/cryst_then_model.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,974 copying MDAnalysisTests/data/pdbqt_querypdb.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,976 copying MDAnalysisTests/data/adk_open.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,982 copying MDAnalysisTests/data/RANDOM_WALK_TOPO.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,984 copying MDAnalysisTests/data/1hvr.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,990 copying MDAnalysisTests/data/conect_parsing.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,992 copying MDAnalysisTests/data/water_methane_acetic-acid_ammonia.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,993 copying MDAnalysisTests/data/conect_error.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,995 copying MDAnalysisTests/data/A6PA6_alpha.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:17,998 copying MDAnalysisTests/data/unordered_res.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,001 copying MDAnalysisTests/data/4E43.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,006 copying MDAnalysisTests/data/charges.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,008 copying MDAnalysisTests/data/5a7u.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,011 copying MDAnalysisTests/data/sameresid_diffresname.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,013 copying MDAnalysisTests/data/CONECT2TER.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,015 copying MDAnalysisTests/data/5digitResid.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,017 copying MDAnalysisTests/data/nmr_neopetrosiamide.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,035 copying MDAnalysisTests/data/xl_serial.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,037 copying MDAnalysisTests/data/nucl_res.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,039 copying MDAnalysisTests/data/1grm_single.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,042 copying MDAnalysisTests/data/model_then_cryst.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,044 copying MDAnalysisTests/data/cobrotoxin_dry_neutral_0.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,048 copying MDAnalysisTests/data/elements.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,050 copying MDAnalysisTests/data/varying_occ_tmp.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,052 copying MDAnalysisTests/data/adk_oplsaa.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,126 copying MDAnalysisTests/data/SINGLECONECT.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,127 copying MDAnalysisTests/data/incomplete.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,130 copying MDAnalysisTests/data/adk_closed.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,137 copying MDAnalysisTests/data/cobrotoxin.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,161 copying MDAnalysisTests/data/align.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,163 copying MDAnalysisTests/data/namd_cgenff.pdb -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,166 creating build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,167 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,180 copying MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,190 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,204 copying MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,220 copying MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,232 copying MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,287 copying MDAnalysisTests/data/tprs/drew_gmx_4.5.5.double.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,315 copying MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,327 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,336 copying MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,367 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,377 copying MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,387 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,398 copying MDAnalysisTests/data/tprs/2lyz_gmx_2020-beta2.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,433 copying MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,467 copying MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,479 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,491 copying MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,505 copying MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,516 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,526 copying MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,536 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,547 copying MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,557 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,566 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,576 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,586 copying MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,597 copying MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,608 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,617 copying MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr -> build/lib/MDAnalysisTests/data/tprs 2023-08-16T00:03:18,629 creating build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,630 copying MDAnalysisTests/data/tprs/all_bonded/dummy.gro -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,631 copying MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.top -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,633 copying MDAnalysisTests/data/tprs/all_bonded/dummy.top -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,635 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2018.mdp -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,637 copying MDAnalysisTests/data/tprs/all_bonded/dummy.mdp -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,639 copying MDAnalysisTests/data/adk_oplsaa.tpr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,672 copying MDAnalysisTests/data/aux_edr.tpr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,694 copying MDAnalysisTests/data/cobrotoxin.tpr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,706 creating build/lib/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:18,707 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:18,710 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:18,713 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:18,715 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:18,718 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:18,721 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:18,724 copying MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr -> build/lib/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:18,727 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,729 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2020-beta2.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,732 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,735 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,738 copying MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,741 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,744 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,747 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,749 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,752 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,754 copying MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,757 copying MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr -> build/lib/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:18,759 copying MDAnalysisTests/data/missing_atomname.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,762 copying MDAnalysisTests/data/sample_velocity_file.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,764 copying MDAnalysisTests/data/sameresid_diffresname.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,766 copying MDAnalysisTests/data/huge_box.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,768 copying MDAnalysisTests/data/two_water_gro_widebox.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,770 copying MDAnalysisTests/data/make_whole.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,772 copying MDAnalysisTests/data/martini_dppc_chol_bilayer.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,783 copying MDAnalysisTests/data/adk_oplsaa.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,845 copying MDAnalysisTests/data/plength.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,866 copying MDAnalysisTests/data/dppc_vesicle_hg.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,870 copying MDAnalysisTests/data/two_water_gro.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,873 copying MDAnalysisTests/data/empty_atom.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,875 copying MDAnalysisTests/data/two_water_gro_multiframe.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,877 copying MDAnalysisTests/data/grovels.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,880 copying MDAnalysisTests/data/residwrap.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,882 copying MDAnalysisTests/data/residwrap_0base.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,884 copying MDAnalysisTests/data/two_water_gro_nonames.gro -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,886 copying MDAnalysisTests/data/xyz_random_walk.xtc -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,890 copying MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,892 copying MDAnalysisTests/data/adk_oplsaa.xtc -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,925 copying MDAnalysisTests/data/aux_edr.xtc -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,935 copying MDAnalysisTests/data/cobrotoxin.xtc -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,941 copying MDAnalysisTests/data/cobrotoxin.trr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,972 copying MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,975 copying MDAnalysisTests/data/surface.trr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:18,977 copying MDAnalysisTests/data/adk_oplsaa.trr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,138 copying MDAnalysisTests/data/adk_oplsaa_dihedral.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,140 copying MDAnalysisTests/data/legacy_DCD_adk_coords.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,143 copying MDAnalysisTests/data/mol2_comments_header_bat.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,145 copying MDAnalysisTests/data/adk_oplsaa_janin.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,148 copying MDAnalysisTests/data/legacy_DCD_c36_coords.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,150 copying MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,154 copying MDAnalysisTests/data/adk_oplsaa_CA_rmsf.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,156 copying MDAnalysisTests/data/adk_oplsaa_LYS_janin.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,158 copying MDAnalysisTests/data/adk_oplsaa_rama.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,161 copying MDAnalysisTests/data/adk_oplsaa_GLY_rama.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,162 copying MDAnalysisTests/data/adk_oplsaa_dihedral_list.npy -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,164 copying MDAnalysisTests/data/adk_open.crd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,171 copying MDAnalysisTests/data/mini.xyz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,173 copying MDAnalysisTests/data/five.xyz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,175 copying MDAnalysisTests/data/2r9r-1b.xyz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,182 creating build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,182 copying MDAnalysisTests/data/Amber/ala.ff19SB.OPC.parm7.bz2 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,185 copying MDAnalysisTests/data/Amber/anti_md1.mdcrd.bz2 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,211 copying MDAnalysisTests/data/Amber/capped-ala.mdcrd.bz2 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,219 copying MDAnalysisTests/data/Amber/ache.mdcrd.bz2 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,222 copying MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,226 copying MDAnalysisTests/data/Amber/bala.prmtop -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,234 copying MDAnalysisTests/data/Amber/capped-ala.prmtop -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,249 copying MDAnalysisTests/data/Amber/chitosan.prmtop -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,254 copying MDAnalysisTests/data/Amber/ache.prmtop -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,259 copying MDAnalysisTests/data/Amber/parmed_fad.prmtop -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,266 copying MDAnalysisTests/data/Amber/cpptraj_traj.prmtop -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,270 copying MDAnalysisTests/data/Amber/anti.top -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,295 copying MDAnalysisTests/data/Amber/posfor.top -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,300 copying MDAnalysisTests/data/Amber/ace_tip3p.parm7 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,306 copying MDAnalysisTests/data/Amber/ace_mbondi3.parm7 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,309 copying MDAnalysisTests/data/Amber/ace_mbondi3.error2.parm7 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,310 copying MDAnalysisTests/data/Amber/ace_mbondi3.error3.parm7 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,312 copying MDAnalysisTests/data/Amber/parmed_ala2_solv.parm7 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,321 copying MDAnalysisTests/data/Amber/ace_mbondi3.error1.parm7 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,323 copying MDAnalysisTests/data/Amber/ace_mbondi3.negative.parm7 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,325 copying MDAnalysisTests/data/Amber/parmed_ala2_solv.rst7 -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,329 copying MDAnalysisTests/data/Amber/bala.trj -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,359 copying MDAnalysisTests/data/Amber/ache.mdcrd -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,363 copying MDAnalysisTests/data/Amber/posfor.ncdf -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,366 copying MDAnalysisTests/data/Amber/bala.ncdf -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,383 copying MDAnalysisTests/data/Amber/cpptraj_traj.nc -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,385 copying MDAnalysisTests/data/Amber/ace_mbondi3.nc -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,387 copying MDAnalysisTests/data/Amber/tz2.truncoct.nc -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,399 copying MDAnalysisTests/data/Amber/ace_tip3p.nc -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,409 copying MDAnalysisTests/data/Amber/test.inpcrd -> build/lib/MDAnalysisTests/data/Amber 2023-08-16T00:03:19,411 copying MDAnalysisTests/data/1A2C.pqr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,420 copying MDAnalysisTests/data/adk_open.pqr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,426 copying MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,431 copying MDAnalysisTests/data/model_then_cryst.pdb.bz2 -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,433 copying MDAnalysisTests/data/C12x64.xml.bz2 -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,435 copying MDAnalysisTests/data/cobrotoxin_protein_forces.xvg.bz2 -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,439 copying MDAnalysisTests/data/surface.pdb.bz2 -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,441 copying MDAnalysisTests/data/6msm.pdb.bz2 -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,445 copying MDAnalysisTests/data/1grm_elNemo_mode7.pdb.bz2 -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,448 copying MDAnalysisTests/data/bigbox.gro.bz2 -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,467 copying MDAnalysisTests/data/2r9r-1b.xyz.bz2 -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,471 copying MDAnalysisTests/data/cryst_then_model.pdb.bz2 -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,473 copying MDAnalysisTests/data/6QYR.mmtf.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,476 copying MDAnalysisTests/data/5KIH.mmtf.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,478 copying MDAnalysisTests/data/19hc.pdb.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,485 copying MDAnalysisTests/data/1osm.pdb.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,488 copying MDAnalysisTests/data/argon_npt_compressed.gro.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,491 copying MDAnalysisTests/data/cryst_then_model.pdb.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,493 copying MDAnalysisTests/data/chainIDnewres.pdb.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,495 copying MDAnalysisTests/data/chainIDrepeat.pdb.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,497 copying MDAnalysisTests/data/1a28.pdb.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,501 copying MDAnalysisTests/data/model_then_cryst.pdb.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,504 copying MDAnalysisTests/data/fullerene.pdb.gz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,506 copying MDAnalysisTests/data/testENT.ent -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,507 copying MDAnalysisTests/data/test.fasta -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,509 copying MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8.dat -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,512 copying MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8_frames10to79.dat -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,514 copying MDAnalysisTests/data/adk_closed_domains.dms -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,522 copying MDAnalysisTests/data/adk_closed_no_segid.dms -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,529 copying MDAnalysisTests/data/adk_closed.dms -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,537 creating build/lib/MDAnalysisTests/data/merge 2023-08-16T00:03:19,537 creating build/lib/MDAnalysisTests/data/merge/2zmm 2023-08-16T00:03:19,538 copying MDAnalysisTests/data/merge/2zmm/water.pdb -> build/lib/MDAnalysisTests/data/merge/2zmm 2023-08-16T00:03:19,541 copying MDAnalysisTests/data/merge/2zmm/protein.pdb -> build/lib/MDAnalysisTests/data/merge/2zmm 2023-08-16T00:03:19,547 copying MDAnalysisTests/data/merge/2zmm/ligand.pdb -> build/lib/MDAnalysisTests/data/merge/2zmm 2023-08-16T00:03:19,549 copying MDAnalysisTests/data/trzfile.trz -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,570 creating build/lib/MDAnalysisTests/data/mol2 2023-08-16T00:03:19,571 copying MDAnalysisTests/data/mol2/Molecule_comments_header.mol2 -> build/lib/MDAnalysisTests/data/mol2 2023-08-16T00:03:19,573 copying MDAnalysisTests/data/mol2/zinc_856218.mol2 -> build/lib/MDAnalysisTests/data/mol2 2023-08-16T00:03:19,575 copying MDAnalysisTests/data/mol2/Molecules.mol2 -> build/lib/MDAnalysisTests/data/mol2 2023-08-16T00:03:19,590 copying MDAnalysisTests/data/mol2/sodium_ion.mol2 -> build/lib/MDAnalysisTests/data/mol2 2023-08-16T00:03:19,592 copying MDAnalysisTests/data/mol2/BrokenMolecule.mol2 -> build/lib/MDAnalysisTests/data/mol2 2023-08-16T00:03:19,594 copying MDAnalysisTests/data/mol2/Molecule.mol2 -> build/lib/MDAnalysisTests/data/mol2 2023-08-16T00:03:19,597 copying MDAnalysisTests/data/mol2/Ligand.mol2 -> build/lib/MDAnalysisTests/data/mol2 2023-08-16T00:03:19,600 creating build/lib/MDAnalysisTests/data/contacts 2023-08-16T00:03:19,601 copying MDAnalysisTests/data/contacts/villin_unfolded.gro.bz2 -> build/lib/MDAnalysisTests/data/contacts 2023-08-16T00:03:19,604 copying MDAnalysisTests/data/contacts/villin_folded.gro.bz2 -> build/lib/MDAnalysisTests/data/contacts 2023-08-16T00:03:19,609 copying MDAnalysisTests/data/contacts/2F4K_qlist5_remap.dat -> build/lib/MDAnalysisTests/data/contacts 2023-08-16T00:03:19,611 creating build/lib/MDAnalysisTests/data/capping 2023-08-16T00:03:19,612 copying MDAnalysisTests/data/capping/aaqaa.gro -> build/lib/MDAnalysisTests/data/capping 2023-08-16T00:03:19,615 copying MDAnalysisTests/data/capping/maestro_aaqaa_capped.pdb -> build/lib/MDAnalysisTests/data/capping 2023-08-16T00:03:19,618 copying MDAnalysisTests/data/capping/nma.pdb -> build/lib/MDAnalysisTests/data/capping 2023-08-16T00:03:19,620 copying MDAnalysisTests/data/capping/ace.pdb -> build/lib/MDAnalysisTests/data/capping 2023-08-16T00:03:19,622 creating build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,623 copying MDAnalysisTests/data/lammps/ifabp_apo_100mM.data.bz2 -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,631 copying MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,650 copying MDAnalysisTests/data/lammps/chain_dump_1.lammpstrj -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,653 copying MDAnalysisTests/data/lammps/albite_triclinic.dump -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,655 copying MDAnalysisTests/data/lammps/hydrogen-class1.data -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,657 copying MDAnalysisTests/data/lammps/image_vf.lammpstrj -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,659 copying MDAnalysisTests/data/lammps/wat.lammpstrj_long.bz2 -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,661 copying MDAnalysisTests/data/lammps/datatest.data -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,720 copying MDAnalysisTests/data/lammps/datatest.trz -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,730 copying MDAnalysisTests/data/lammps/wat.lammpstrj.bz2 -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,732 copying MDAnalysisTests/data/lammps/chain_initial.data -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,734 copying MDAnalysisTests/data/lammps/albite_triclinic.data -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,737 copying MDAnalysisTests/data/lammps/hydrogen-class1.data2 -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,739 copying MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2 -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,745 copying MDAnalysisTests/data/lammps/chain_dump_2.lammpstrj -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,748 copying MDAnalysisTests/data/lammps/mini.data -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,750 copying MDAnalysisTests/data/lammps/a_lot_of_bond_types.data -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,753 copying MDAnalysisTests/data/lammps/spce_all_coords.lammpstrj.bz2 -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,794 copying MDAnalysisTests/data/lammps/spce_no_coords.lammpstrj.bz2 -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,797 copying MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,806 copying MDAnalysisTests/data/lammps/deletedatoms.data -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,808 copying MDAnalysisTests/data/lammps/image_vf.data -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,810 copying MDAnalysisTests/data/lammps/pairij_coeffs.data.bz2 -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,813 copying MDAnalysisTests/data/lammps/ifabp_apo_100mM.in -> build/lib/MDAnalysisTests/data/lammps 2023-08-16T00:03:19,815 creating build/lib/MDAnalysisTests/data/gms 2023-08-16T00:03:19,815 copying MDAnalysisTests/data/gms/surf2wat.gms -> build/lib/MDAnalysisTests/data/gms 2023-08-16T00:03:19,819 copying MDAnalysisTests/data/gms/symopt.gms -> build/lib/MDAnalysisTests/data/gms 2023-08-16T00:03:19,823 copying MDAnalysisTests/data/gms/c1opt.gms.gz -> build/lib/MDAnalysisTests/data/gms 2023-08-16T00:03:19,826 creating build/lib/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:19,827 copying MDAnalysisTests/data/dlpoly/CONFIG_order -> build/lib/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:19,829 copying MDAnalysisTests/data/dlpoly/CONFIG_minimal -> build/lib/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:19,831 copying MDAnalysisTests/data/dlpoly/CONFIG -> build/lib/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:19,835 copying MDAnalysisTests/data/dlpoly/HISTORY_classic -> build/lib/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:19,837 copying MDAnalysisTests/data/dlpoly/HISTORY -> build/lib/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:19,845 copying MDAnalysisTests/data/dlpoly/HISTORY_minimal -> build/lib/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:19,847 copying MDAnalysisTests/data/dlpoly/HISTORY_minimal_cell -> build/lib/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:19,850 copying MDAnalysisTests/data/dlpoly/HISTORY_order -> build/lib/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:19,852 creating build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,853 copying MDAnalysisTests/data/coordinates/test.xtc -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,855 copying MDAnalysisTests/data/coordinates/test.xyz.bz2 -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,857 copying MDAnalysisTests/data/coordinates/create_h5md_data.py -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,859 copying MDAnalysisTests/data/coordinates/test.trr -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,861 copying MDAnalysisTests/data/coordinates/create_data.py -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,863 copying MDAnalysisTests/data/coordinates/test.dcd -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,865 copying MDAnalysisTests/data/coordinates/new_hexane.arc -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,868 copying MDAnalysisTests/data/coordinates/test.xyz -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,870 copying MDAnalysisTests/data/coordinates/test_incomplete_vel.gro -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,872 copying MDAnalysisTests/data/coordinates/test.gro.bz2 -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,874 copying MDAnalysisTests/data/coordinates/test.h5md -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,880 copying MDAnalysisTests/data/coordinates/README.md -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,883 copying MDAnalysisTests/data/coordinates/test.tng -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,888 copying MDAnalysisTests/data/coordinates/test.gro -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,892 copying MDAnalysisTests/data/coordinates/test.txyz -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,894 copying MDAnalysisTests/data/coordinates/test_topology.pdb -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,898 copying MDAnalysisTests/data/coordinates/test.arc -> build/lib/MDAnalysisTests/data/coordinates 2023-08-16T00:03:19,900 copying MDAnalysisTests/data/test_lowf.xvg -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,902 copying MDAnalysisTests/data/test_highf.xvg -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,904 copying MDAnalysisTests/data/test.xvg -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,906 copying MDAnalysisTests/data/bad_num_col.xvg -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,908 copying MDAnalysisTests/data/3NJW-onlyrequired.mmtf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,910 copying MDAnalysisTests/data/1ubq-less-optional.mmtf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,913 copying MDAnalysisTests/data/173D.mmtf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,915 creating build/lib/MDAnalysisTests/data/analysis 2023-08-16T00:03:19,916 copying MDAnalysisTests/data/analysis/1k5i_c36.pdb.gz -> build/lib/MDAnalysisTests/data/analysis 2023-08-16T00:03:19,926 copying MDAnalysisTests/data/analysis/1k5i_c36.psf.gz -> build/lib/MDAnalysisTests/data/analysis 2023-08-16T00:03:19,938 copying MDAnalysisTests/data/analysis/align_unbound.pdb.gz -> build/lib/MDAnalysisTests/data/analysis 2023-08-16T00:03:19,940 copying MDAnalysisTests/data/analysis/align_bound.pdb.gz -> build/lib/MDAnalysisTests/data/analysis 2023-08-16T00:03:19,942 copying MDAnalysisTests/data/analysis/YiiP_lipids.gro.gz -> build/lib/MDAnalysisTests/data/analysis 2023-08-16T00:03:19,964 copying MDAnalysisTests/data/analysis/YiiP_lipids.xtc -> build/lib/MDAnalysisTests/data/analysis 2023-08-16T00:03:19,978 copying MDAnalysisTests/data/example_bonds.gsd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,982 copying MDAnalysisTests/data/example.gsd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:19,990 copying MDAnalysisTests/data/example_longer.gsd -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,033 creating build/lib/MDAnalysisTests/data/windows 2023-08-16T00:03:20,034 copying MDAnalysisTests/data/windows/WIN_test.arc -> build/lib/MDAnalysisTests/data/windows 2023-08-16T00:03:20,037 copying MDAnalysisTests/data/windows/WIN_HISTORY -> build/lib/MDAnalysisTests/data/windows 2023-08-16T00:03:20,043 copying MDAnalysisTests/data/windows/README.md -> build/lib/MDAnalysisTests/data/windows 2023-08-16T00:03:20,045 copying MDAnalysisTests/data/windows/WIN_nmr_neopetrosiamide.pdb -> build/lib/MDAnalysisTests/data/windows 2023-08-16T00:03:20,064 copying MDAnalysisTests/data/windows/WIN_ache.mdcrd -> build/lib/MDAnalysisTests/data/windows 2023-08-16T00:03:20,068 copying MDAnalysisTests/data/windows/WIN_wat.lammpstrj -> build/lib/MDAnalysisTests/data/windows 2023-08-16T00:03:20,070 copying MDAnalysisTests/data/atomtypes_charge.itp -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,072 copying MDAnalysisTests/data/gromacs_ala10.itp -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,075 copying MDAnalysisTests/data/spce.itp -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,077 copying MDAnalysisTests/data/edited_itp.itp -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,080 copying MDAnalysisTests/data/atomtypes.itp -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,082 copying MDAnalysisTests/data/no_endif_spc.itp -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,084 copying MDAnalysisTests/data/itp_nomass.itp -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,087 copying MDAnalysisTests/data/tip5p.itp -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,089 creating build/lib/MDAnalysisTests/data/gromacs 2023-08-16T00:03:20,089 creating build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:20,090 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ff_dum.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:20,092 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffnonbonded.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:20,097 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ions.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:20,099 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/test.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:20,101 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/spc.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:20,103 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffbonded.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:20,106 copying MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/forcefield.itp -> build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:20,108 copying MDAnalysisTests/data/adk_open.coor -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,112 copying MDAnalysisTests/data/cobrotoxin.h5md -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,162 copying MDAnalysisTests/data/fhiaims.in -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,166 copying MDAnalysisTests/data/gromacs_ala10.top -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,169 copying MDAnalysisTests/data/bad_top.top -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,173 copying MDAnalysisTests/data/molecule.sdf -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,176 copying MDAnalysisTests/data/test.edr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,180 copying MDAnalysisTests/data/single_frame.edr -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,186 copying MDAnalysisTests/data/argon_npt_compressed_uneven.tng -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,194 copying MDAnalysisTests/data/argon_npt_compressed.tng -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,210 copying MDAnalysisTests/data/argon_npt_compressed_vels_forces.tng -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,235 copying MDAnalysisTests/data/4x8u.pdbx -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,240 copying MDAnalysisTests/data/aux_edr_raw.txt -> build/lib/MDAnalysisTests/data 2023-08-16T00:03:20,288 /home/piwheels/.local/lib/python3.9/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-08-16T00:03:20,288 !! 2023-08-16T00:03:20,289 ******************************************************************************** 2023-08-16T00:03:20,289 Please avoid running ``setup.py`` directly. 2023-08-16T00:03:20,289 Instead, use pypa/build, pypa/installer, pypa/build or 2023-08-16T00:03:20,289 other standards-based tools. 2023-08-16T00:03:20,289 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-08-16T00:03:20,290 ******************************************************************************** 2023-08-16T00:03:20,290 !! 2023-08-16T00:03:20,290 self.initialize_options() 2023-08-16T00:03:20,325 installing to build/bdist.linux-armv7l/wheel 2023-08-16T00:03:20,325 running install 2023-08-16T00:03:20,362 running install_lib 2023-08-16T00:03:20,399 creating build/bdist.linux-armv7l 2023-08-16T00:03:20,399 creating build/bdist.linux-armv7l/wheel 2023-08-16T00:03:20,401 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests 2023-08-16T00:03:20,402 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,403 copying build/lib/MDAnalysisTests/utils/test_authors.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,405 copying build/lib/MDAnalysisTests/utils/test_failure.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,407 copying build/lib/MDAnalysisTests/utils/test_transformations.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,409 copying build/lib/MDAnalysisTests/utils/test_imports.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,411 copying build/lib/MDAnalysisTests/utils/test_streamio.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,413 copying build/lib/MDAnalysisTests/utils/test_selections.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,415 copying build/lib/MDAnalysisTests/utils/test_persistence.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,417 copying build/lib/MDAnalysisTests/utils/test_meta.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,419 copying build/lib/MDAnalysisTests/utils/test_qcprot.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,421 copying build/lib/MDAnalysisTests/utils/test_units.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,423 copying build/lib/MDAnalysisTests/utils/test_pickleio.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,425 copying build/lib/MDAnalysisTests/utils/test_duecredit.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,427 copying build/lib/MDAnalysisTests/utils/test_datafiles.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,429 copying build/lib/MDAnalysisTests/utils/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,430 copying build/lib/MDAnalysisTests/utils/test_log.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,432 copying build/lib/MDAnalysisTests/utils/test_modelling.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/utils 2023-08-16T00:03:20,434 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/import 2023-08-16T00:03:20,435 copying build/lib/MDAnalysisTests/import/test_import.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/import 2023-08-16T00:03:20,437 copying build/lib/MDAnalysisTests/import/fork_called.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/import 2023-08-16T00:03:20,439 copying build/lib/MDAnalysisTests/import/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/import 2023-08-16T00:03:20,440 copying build/lib/MDAnalysisTests/datafiles.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2023-08-16T00:03:20,443 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/visualization 2023-08-16T00:03:20,444 copying build/lib/MDAnalysisTests/visualization/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/visualization 2023-08-16T00:03:20,446 copying build/lib/MDAnalysisTests/visualization/test_streamlines.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/visualization 2023-08-16T00:03:20,448 copying build/lib/MDAnalysisTests/test_api.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2023-08-16T00:03:20,450 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/converters 2023-08-16T00:03:20,451 copying build/lib/MDAnalysisTests/converters/test_parmed_parser.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/converters 2023-08-16T00:03:20,453 copying build/lib/MDAnalysisTests/converters/test_openmm_parser.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/converters 2023-08-16T00:03:20,455 copying build/lib/MDAnalysisTests/converters/test_rdkit_parser.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/converters 2023-08-16T00:03:20,457 copying build/lib/MDAnalysisTests/converters/test_openmm.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/converters 2023-08-16T00:03:20,459 copying build/lib/MDAnalysisTests/converters/test_rdkit.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/converters 2023-08-16T00:03:20,461 copying build/lib/MDAnalysisTests/converters/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/converters 2023-08-16T00:03:20,463 copying build/lib/MDAnalysisTests/converters/test_parmed.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/converters 2023-08-16T00:03:20,465 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2023-08-16T00:03:20,466 copying build/lib/MDAnalysisTests/auxiliary/test_xvg.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2023-08-16T00:03:20,469 copying build/lib/MDAnalysisTests/auxiliary/test_edr.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2023-08-16T00:03:20,472 copying build/lib/MDAnalysisTests/auxiliary/base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2023-08-16T00:03:20,474 copying build/lib/MDAnalysisTests/auxiliary/test_core.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2023-08-16T00:03:20,476 copying build/lib/MDAnalysisTests/auxiliary/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/auxiliary 2023-08-16T00:03:20,478 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,479 copying build/lib/MDAnalysisTests/coordinates/test_reader_api.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,481 copying build/lib/MDAnalysisTests/coordinates/test_lammps.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,484 copying build/lib/MDAnalysisTests/coordinates/test_windows.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,486 copying build/lib/MDAnalysisTests/coordinates/test_pdbqt.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,488 copying build/lib/MDAnalysisTests/coordinates/test_tng.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,490 copying build/lib/MDAnalysisTests/coordinates/test_pqr.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,493 copying build/lib/MDAnalysisTests/coordinates/test_gro.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,495 copying build/lib/MDAnalysisTests/coordinates/test_dcd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,497 copying build/lib/MDAnalysisTests/coordinates/test_copying.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,499 copying build/lib/MDAnalysisTests/coordinates/reference.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,501 copying build/lib/MDAnalysisTests/coordinates/test_mmtf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,503 copying build/lib/MDAnalysisTests/coordinates/test_crd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,505 copying build/lib/MDAnalysisTests/coordinates/test_timestep_api.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,508 copying build/lib/MDAnalysisTests/coordinates/test_memory.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,510 copying build/lib/MDAnalysisTests/coordinates/base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,513 copying build/lib/MDAnalysisTests/coordinates/test_h5md.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,516 copying build/lib/MDAnalysisTests/coordinates/test_pdb.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,519 copying build/lib/MDAnalysisTests/coordinates/test_chemfiles.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,521 copying build/lib/MDAnalysisTests/coordinates/test_amber_inpcrd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,523 copying build/lib/MDAnalysisTests/coordinates/test_writer_registration.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,524 copying build/lib/MDAnalysisTests/coordinates/test_trz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,527 copying build/lib/MDAnalysisTests/coordinates/test_gsd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,528 copying build/lib/MDAnalysisTests/coordinates/test_netcdf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,531 copying build/lib/MDAnalysisTests/coordinates/test_null.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,533 copying build/lib/MDAnalysisTests/coordinates/test_txyz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,535 copying build/lib/MDAnalysisTests/coordinates/test_gms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,536 copying build/lib/MDAnalysisTests/coordinates/test_writer_api.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,538 copying build/lib/MDAnalysisTests/coordinates/test_dlpoly.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,540 copying build/lib/MDAnalysisTests/coordinates/test_xdr.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,543 copying build/lib/MDAnalysisTests/coordinates/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,545 copying build/lib/MDAnalysisTests/coordinates/test_mol2.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,547 copying build/lib/MDAnalysisTests/coordinates/test_xyz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,549 copying build/lib/MDAnalysisTests/coordinates/test_trj.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,551 copying build/lib/MDAnalysisTests/coordinates/test_namdbin.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,553 copying build/lib/MDAnalysisTests/coordinates/test_fhiaims.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,555 copying build/lib/MDAnalysisTests/coordinates/test_chainreader.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,557 copying build/lib/MDAnalysisTests/coordinates/test_dms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/coordinates 2023-08-16T00:03:20,562 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,563 copying build/lib/MDAnalysisTests/data/watdyn.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,565 copying build/lib/MDAnalysisTests/data/cryst_then_model.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,567 copying build/lib/MDAnalysisTests/data/adk_oplsaa_dihedral.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,568 copying build/lib/MDAnalysisTests/data/atomtypes_charge.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,571 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,572 copying build/lib/MDAnalysisTests/data/Amber/ace_tip3p.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,579 copying build/lib/MDAnalysisTests/data/Amber/bala.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,587 copying build/lib/MDAnalysisTests/data/Amber/posfor.ncdf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,590 copying build/lib/MDAnalysisTests/data/Amber/bala.trj -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,621 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,624 copying build/lib/MDAnalysisTests/data/Amber/test.inpcrd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,626 copying build/lib/MDAnalysisTests/data/Amber/anti.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,656 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.error2.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,658 copying build/lib/MDAnalysisTests/data/Amber/ala.ff19SB.OPC.parm7.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,660 copying build/lib/MDAnalysisTests/data/Amber/cpptraj_traj.nc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,662 copying build/lib/MDAnalysisTests/data/Amber/anti_md1.mdcrd.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,684 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.nc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,686 copying build/lib/MDAnalysisTests/data/Amber/capped-ala.mdcrd.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,694 copying build/lib/MDAnalysisTests/data/Amber/parmed_ala2_solv.rst7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,698 copying build/lib/MDAnalysisTests/data/Amber/capped-ala.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,717 copying build/lib/MDAnalysisTests/data/Amber/chitosan.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,722 copying build/lib/MDAnalysisTests/data/Amber/posfor.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,728 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.error3.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,729 copying build/lib/MDAnalysisTests/data/Amber/tz2.truncoct.nc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,742 copying build/lib/MDAnalysisTests/data/Amber/ace_tip3p.nc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,753 copying build/lib/MDAnalysisTests/data/Amber/ache.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,757 copying build/lib/MDAnalysisTests/data/Amber/parmed_ala2_solv.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,767 copying build/lib/MDAnalysisTests/data/Amber/ache.mdcrd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,771 copying build/lib/MDAnalysisTests/data/Amber/bala.ncdf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,788 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.error1.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,789 copying build/lib/MDAnalysisTests/data/Amber/ache.mdcrd.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,792 copying build/lib/MDAnalysisTests/data/Amber/ace_mbondi3.negative.parm7 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,794 copying build/lib/MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,797 copying build/lib/MDAnalysisTests/data/Amber/parmed_fad.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,801 copying build/lib/MDAnalysisTests/data/Amber/cpptraj_traj.prmtop -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/Amber 2023-08-16T00:03:20,804 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge 2023-08-16T00:03:20,806 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge/2zmm 2023-08-16T00:03:20,807 copying build/lib/MDAnalysisTests/data/merge/2zmm/water.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge/2zmm 2023-08-16T00:03:20,809 copying build/lib/MDAnalysisTests/data/merge/2zmm/protein.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge/2zmm 2023-08-16T00:03:20,814 copying build/lib/MDAnalysisTests/data/merge/2zmm/ligand.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/merge/2zmm 2023-08-16T00:03:20,816 copying build/lib/MDAnalysisTests/data/trz_psf.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,826 copying build/lib/MDAnalysisTests/data/6QYR.mmtf.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,828 copying build/lib/MDAnalysisTests/data/test.edr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,829 copying build/lib/MDAnalysisTests/data/5KIH.mmtf.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,831 copying build/lib/MDAnalysisTests/data/testENT.ent -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,833 copying build/lib/MDAnalysisTests/data/gromacs_ala10.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,836 copying build/lib/MDAnalysisTests/data/argon_npt_compressed_uneven.tng -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,840 copying build/lib/MDAnalysisTests/data/pdbqt_querypdb.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,843 copying build/lib/MDAnalysisTests/data/cobrotoxin.h5md -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,876 copying build/lib/MDAnalysisTests/data/missing_atomname.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,878 copying build/lib/MDAnalysisTests/data/legacy_DCD_adk_coords.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,881 copying build/lib/MDAnalysisTests/data/adk_open.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:20,888 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:20,889 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:20,900 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:20,911 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:20,926 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:20,938 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:20,948 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:20,964 copying build/lib/MDAnalysisTests/data/tprs/drew_gmx_4.5.5.double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:20,985 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:20,995 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,007 copying build/lib/MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,043 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,053 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,063 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,082 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2020-beta2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,130 copying build/lib/MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,175 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:21,176 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:21,179 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:21,182 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:21,185 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:21,188 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:21,191 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:21,194 copying build/lib/MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/virtual_sites 2023-08-16T00:03:21,197 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,219 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,231 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,232 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,234 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,237 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2020-beta2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,240 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,242 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,245 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,248 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2018.mdp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,250 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,252 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,254 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,257 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,259 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy.mdp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,261 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,263 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,266 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,268 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,270 copying build/lib/MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs/all_bonded 2023-08-16T00:03:21,272 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,285 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,295 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,305 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,315 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,326 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,339 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,351 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,361 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,371 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,381 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,390 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,401 copying build/lib/MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/tprs 2023-08-16T00:03:21,412 copying build/lib/MDAnalysisTests/data/RANDOM_WALK_TOPO.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,415 copying build/lib/MDAnalysisTests/data/namd_cgenff.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,417 copying build/lib/MDAnalysisTests/data/sample_velocity_file.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,419 copying build/lib/MDAnalysisTests/data/1hvr.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,424 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2023-08-16T00:03:21,425 copying build/lib/MDAnalysisTests/data/mol2/Molecule_comments_header.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2023-08-16T00:03:21,427 copying build/lib/MDAnalysisTests/data/mol2/zinc_856218.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2023-08-16T00:03:21,430 copying build/lib/MDAnalysisTests/data/mol2/Molecules.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2023-08-16T00:03:21,447 copying build/lib/MDAnalysisTests/data/mol2/sodium_ion.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2023-08-16T00:03:21,449 copying build/lib/MDAnalysisTests/data/mol2/BrokenMolecule.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2023-08-16T00:03:21,450 copying build/lib/MDAnalysisTests/data/mol2/Molecule.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2023-08-16T00:03:21,452 copying build/lib/MDAnalysisTests/data/mol2/Ligand.mol2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/mol2 2023-08-16T00:03:21,455 copying build/lib/MDAnalysisTests/data/19hc.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,461 copying build/lib/MDAnalysisTests/data/mol2_comments_header_bat.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,462 copying build/lib/MDAnalysisTests/data/adk_closed_NAMD.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,478 copying build/lib/MDAnalysisTests/data/conect_parsing.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,480 copying build/lib/MDAnalysisTests/data/water_methane_acetic-acid_ammonia.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,481 copying build/lib/MDAnalysisTests/data/mini.xyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,483 copying build/lib/MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,487 copying build/lib/MDAnalysisTests/data/spce.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,489 copying build/lib/MDAnalysisTests/data/empty.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,490 copying build/lib/MDAnalysisTests/data/adk_oplsaa_janin.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,493 copying build/lib/MDAnalysisTests/data/model_then_cryst.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,495 copying build/lib/MDAnalysisTests/data/conect_error.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,498 copying build/lib/MDAnalysisTests/data/SiN_tric_namd.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,502 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/contacts 2023-08-16T00:03:21,503 copying build/lib/MDAnalysisTests/data/contacts/villin_unfolded.gro.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/contacts 2023-08-16T00:03:21,507 copying build/lib/MDAnalysisTests/data/contacts/villin_folded.gro.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/contacts 2023-08-16T00:03:21,511 copying build/lib/MDAnalysisTests/data/contacts/2F4K_qlist5_remap.dat -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/contacts 2023-08-16T00:03:21,514 copying build/lib/MDAnalysisTests/data/five.xyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,516 copying build/lib/MDAnalysisTests/data/A6PA6_alpha.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,518 copying build/lib/MDAnalysisTests/data/sameresid_diffresname.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,520 copying build/lib/MDAnalysisTests/data/tip125_tric_C36.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,523 copying build/lib/MDAnalysisTests/data/adk_notop_BAD.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,533 copying build/lib/MDAnalysisTests/data/edited_itp.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,536 copying build/lib/MDAnalysisTests/data/unordered_res.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,539 copying build/lib/MDAnalysisTests/data/parmed_ala3.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,542 copying build/lib/MDAnalysisTests/data/huge_box.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,544 copying build/lib/MDAnalysisTests/data/atomtypes.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,546 copying build/lib/MDAnalysisTests/data/adk_dims2.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,619 copying build/lib/MDAnalysisTests/data/3NJW-onlyrequired.mmtf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,621 copying build/lib/MDAnalysisTests/data/C12x64.xml.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,623 copying build/lib/MDAnalysisTests/data/1osm.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,626 copying build/lib/MDAnalysisTests/data/adk_closed_domains.dms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,634 copying build/lib/MDAnalysisTests/data/two_water_gro_widebox.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,636 copying build/lib/MDAnalysisTests/data/cobrotoxin_protein_forces.xvg.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,638 copying build/lib/MDAnalysisTests/data/gromacs_ala10.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,640 copying build/lib/MDAnalysisTests/data/trzfile.trz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,660 copying build/lib/MDAnalysisTests/data/surface.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,661 copying build/lib/MDAnalysisTests/data/4E43.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,666 copying build/lib/MDAnalysisTests/data/1ubq-less-optional.mmtf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,669 copying build/lib/MDAnalysisTests/data/charges.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,671 copying build/lib/MDAnalysisTests/data/argon_npt_compressed.gro.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,673 copying build/lib/MDAnalysisTests/data/5a7u.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,677 copying build/lib/MDAnalysisTests/data/sameresid_diffresname.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,679 copying build/lib/MDAnalysisTests/data/make_whole.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,680 copying build/lib/MDAnalysisTests/data/test_lowf.xvg -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,682 copying build/lib/MDAnalysisTests/data/martini_dppc_chol_bilayer.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,690 copying build/lib/MDAnalysisTests/data/cryst_then_model.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,692 copying build/lib/MDAnalysisTests/data/no_endif_spc.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,693 copying build/lib/MDAnalysisTests/data/6msm.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,698 copying build/lib/MDAnalysisTests/data/adk_oplsaa.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,732 copying build/lib/MDAnalysisTests/data/example_bonds.gsd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,735 copying build/lib/MDAnalysisTests/data/tip125_tric_C36.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,738 copying build/lib/MDAnalysisTests/data/chainIDnewres.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,740 copying build/lib/MDAnalysisTests/data/2r9r-1b.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,747 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,748 copying build/lib/MDAnalysisTests/data/coordinates/test.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,751 copying build/lib/MDAnalysisTests/data/coordinates/test.xyz.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,752 copying build/lib/MDAnalysisTests/data/coordinates/create_h5md_data.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,755 copying build/lib/MDAnalysisTests/data/coordinates/test.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,756 copying build/lib/MDAnalysisTests/data/coordinates/create_data.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,758 copying build/lib/MDAnalysisTests/data/coordinates/test.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,760 copying build/lib/MDAnalysisTests/data/coordinates/new_hexane.arc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,762 copying build/lib/MDAnalysisTests/data/coordinates/test.xyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,764 copying build/lib/MDAnalysisTests/data/coordinates/test_incomplete_vel.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,766 copying build/lib/MDAnalysisTests/data/coordinates/test.gro.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,768 copying build/lib/MDAnalysisTests/data/coordinates/test.h5md -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,772 copying build/lib/MDAnalysisTests/data/coordinates/README.md -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,774 copying build/lib/MDAnalysisTests/data/coordinates/test.tng -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,777 copying build/lib/MDAnalysisTests/data/coordinates/test.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,779 copying build/lib/MDAnalysisTests/data/coordinates/test.txyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,781 copying build/lib/MDAnalysisTests/data/coordinates/test_topology.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,783 copying build/lib/MDAnalysisTests/data/coordinates/test.arc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/coordinates 2023-08-16T00:03:21,785 copying build/lib/MDAnalysisTests/data/cobrotoxin.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,816 copying build/lib/MDAnalysisTests/data/SiN_tric_namd.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,829 copying build/lib/MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,831 copying build/lib/MDAnalysisTests/data/legacy_DCD_c36_coords.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,833 copying build/lib/MDAnalysisTests/data/1A2C.pqr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,841 copying build/lib/MDAnalysisTests/data/CONECT2TER.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,843 copying build/lib/MDAnalysisTests/data/xyz_random_walk.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,846 copying build/lib/MDAnalysisTests/data/nosegid.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,848 copying build/lib/MDAnalysisTests/data/1grm_elNemo_mode7.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,851 copying build/lib/MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,854 copying build/lib/MDAnalysisTests/data/plength.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,869 copying build/lib/MDAnalysisTests/data/5digitResid.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,870 copying build/lib/MDAnalysisTests/data/dppc_vesicle_hg.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,874 copying build/lib/MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8.dat -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,876 copying build/lib/MDAnalysisTests/data/example.gsd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,885 copying build/lib/MDAnalysisTests/data/4x8u.pdbx -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,888 copying build/lib/MDAnalysisTests/data/nmr_neopetrosiamide.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,902 copying build/lib/MDAnalysisTests/data/argon_npt_compressed.tng -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,914 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:21,916 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY_classic -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:21,918 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:21,926 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY_minimal -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:21,928 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY_minimal_cell -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:21,931 copying build/lib/MDAnalysisTests/data/dlpoly/CONFIG_order -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:21,933 copying build/lib/MDAnalysisTests/data/dlpoly/CONFIG_minimal -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:21,936 copying build/lib/MDAnalysisTests/data/dlpoly/CONFIG -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:21,940 copying build/lib/MDAnalysisTests/data/dlpoly/HISTORY_order -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/dlpoly 2023-08-16T00:03:21,942 copying build/lib/MDAnalysisTests/data/two_water_gro.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,945 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gms 2023-08-16T00:03:21,947 copying build/lib/MDAnalysisTests/data/gms/surf2wat.gms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gms 2023-08-16T00:03:21,951 copying build/lib/MDAnalysisTests/data/gms/symopt.gms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gms 2023-08-16T00:03:21,957 copying build/lib/MDAnalysisTests/data/gms/c1opt.gms.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gms 2023-08-16T00:03:21,960 copying build/lib/MDAnalysisTests/data/adk_notop.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,970 copying build/lib/MDAnalysisTests/data/surface.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,973 copying build/lib/MDAnalysisTests/data/empty_atom.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,975 copying build/lib/MDAnalysisTests/data/two_water_gro_multiframe.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,977 copying build/lib/MDAnalysisTests/data/xl_serial.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:21,979 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2023-08-16T00:03:21,980 copying build/lib/MDAnalysisTests/data/analysis/1k5i_c36.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2023-08-16T00:03:21,988 copying build/lib/MDAnalysisTests/data/analysis/1k5i_c36.psf.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2023-08-16T00:03:21,997 copying build/lib/MDAnalysisTests/data/analysis/align_unbound.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2023-08-16T00:03:21,999 copying build/lib/MDAnalysisTests/data/analysis/align_bound.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2023-08-16T00:03:22,001 copying build/lib/MDAnalysisTests/data/analysis/YiiP_lipids.gro.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2023-08-16T00:03:22,019 copying build/lib/MDAnalysisTests/data/analysis/YiiP_lipids.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/analysis 2023-08-16T00:03:22,033 copying build/lib/MDAnalysisTests/data/nucl_res.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,035 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2023-08-16T00:03:22,036 copying build/lib/MDAnalysisTests/data/capping/maestro_aaqaa_capped.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2023-08-16T00:03:22,039 copying build/lib/MDAnalysisTests/data/capping/aaqaa.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2023-08-16T00:03:22,041 copying build/lib/MDAnalysisTests/data/capping/nma.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2023-08-16T00:03:22,042 copying build/lib/MDAnalysisTests/data/capping/ace.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/capping 2023-08-16T00:03:22,044 copying build/lib/MDAnalysisTests/data/test_highf.xvg -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,046 copying build/lib/MDAnalysisTests/data/grovels.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,048 copying build/lib/MDAnalysisTests/data/bigbox.gro.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,079 copying build/lib/MDAnalysisTests/data/1grm_single.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,082 copying build/lib/MDAnalysisTests/data/single_frame.edr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,084 copying build/lib/MDAnalysisTests/data/adk_dims.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,141 copying build/lib/MDAnalysisTests/data/2r9r-1b.xyz.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,144 copying build/lib/MDAnalysisTests/data/fhiaims.in -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,146 copying build/lib/MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,147 copying build/lib/MDAnalysisTests/data/residwrap.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,149 copying build/lib/MDAnalysisTests/data/watdyn.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,151 copying build/lib/MDAnalysisTests/data/aux_edr_raw.txt -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,153 copying build/lib/MDAnalysisTests/data/bad_top.top -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,154 copying build/lib/MDAnalysisTests/data/itp_nomass.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,157 copying build/lib/MDAnalysisTests/data/test.fasta -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,158 copying build/lib/MDAnalysisTests/data/adk_oplsaa.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,191 copying build/lib/MDAnalysisTests/data/173D.mmtf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,194 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2023-08-16T00:03:22,194 copying build/lib/MDAnalysisTests/data/windows/WIN_test.arc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2023-08-16T00:03:22,196 copying build/lib/MDAnalysisTests/data/windows/WIN_HISTORY -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2023-08-16T00:03:22,201 copying build/lib/MDAnalysisTests/data/windows/README.md -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2023-08-16T00:03:22,203 copying build/lib/MDAnalysisTests/data/windows/WIN_nmr_neopetrosiamide.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2023-08-16T00:03:22,216 copying build/lib/MDAnalysisTests/data/windows/WIN_ache.mdcrd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2023-08-16T00:03:22,219 copying build/lib/MDAnalysisTests/data/windows/WIN_wat.lammpstrj -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/windows 2023-08-16T00:03:22,220 copying build/lib/MDAnalysisTests/data/adk_open.crd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,227 copying build/lib/MDAnalysisTests/data/model_then_cryst.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,228 copying build/lib/MDAnalysisTests/data/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,230 copying build/lib/MDAnalysisTests/data/aux_edr.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,253 copying build/lib/MDAnalysisTests/data/2r9r-1b.xyz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,260 copying build/lib/MDAnalysisTests/data/adk_oplsaa.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,327 copying build/lib/MDAnalysisTests/data/test.xvg -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,329 copying build/lib/MDAnalysisTests/data/aux_edr.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,339 copying build/lib/MDAnalysisTests/data/cryst_then_model.pdb.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,341 copying build/lib/MDAnalysisTests/data/adk_oplsaa_CA_rmsf.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,343 copying build/lib/MDAnalysisTests/data/bad_num_col.xvg -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,346 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,346 copying build/lib/MDAnalysisTests/data/lammps/ifabp_apo_100mM.data.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,352 copying build/lib/MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,366 copying build/lib/MDAnalysisTests/data/lammps/chain_dump_1.lammpstrj -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,368 copying build/lib/MDAnalysisTests/data/lammps/albite_triclinic.dump -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,369 copying build/lib/MDAnalysisTests/data/lammps/hydrogen-class1.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,371 copying build/lib/MDAnalysisTests/data/lammps/image_vf.lammpstrj -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,373 copying build/lib/MDAnalysisTests/data/lammps/wat.lammpstrj_long.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,374 copying build/lib/MDAnalysisTests/data/lammps/datatest.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,424 copying build/lib/MDAnalysisTests/data/lammps/datatest.trz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,433 copying build/lib/MDAnalysisTests/data/lammps/wat.lammpstrj.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,435 copying build/lib/MDAnalysisTests/data/lammps/chain_initial.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,437 copying build/lib/MDAnalysisTests/data/lammps/albite_triclinic.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,439 copying build/lib/MDAnalysisTests/data/lammps/hydrogen-class1.data2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,441 copying build/lib/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,449 copying build/lib/MDAnalysisTests/data/lammps/chain_dump_2.lammpstrj -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,451 copying build/lib/MDAnalysisTests/data/lammps/mini.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,453 copying build/lib/MDAnalysisTests/data/lammps/a_lot_of_bond_types.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,456 copying build/lib/MDAnalysisTests/data/lammps/spce_all_coords.lammpstrj.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,491 copying build/lib/MDAnalysisTests/data/lammps/spce_no_coords.lammpstrj.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,494 copying build/lib/MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,501 copying build/lib/MDAnalysisTests/data/lammps/deletedatoms.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,503 copying build/lib/MDAnalysisTests/data/lammps/image_vf.data -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,504 copying build/lib/MDAnalysisTests/data/lammps/pairij_coeffs.data.bz2 -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,508 copying build/lib/MDAnalysisTests/data/lammps/ifabp_apo_100mM.in -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/lammps 2023-08-16T00:03:22,510 copying build/lib/MDAnalysisTests/data/cobrotoxin_dry_neutral_0.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,513 copying build/lib/MDAnalysisTests/data/elements.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,515 copying build/lib/MDAnalysisTests/data/adk_closed_no_segid.dms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,525 copying build/lib/MDAnalysisTests/data/chainIDrepeat.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,527 copying build/lib/MDAnalysisTests/data/varying_occ_tmp.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,529 copying build/lib/MDAnalysisTests/data/1a28.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,533 copying build/lib/MDAnalysisTests/data/cobrotoxin.tpr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,546 copying build/lib/MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8_frames10to79.dat -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,549 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs 2023-08-16T00:03:22,551 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:22,552 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ff_dum.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:22,554 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffnonbonded.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:22,559 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ions.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:22,561 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/test.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:22,562 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/spc.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:22,565 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffbonded.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:22,567 copying build/lib/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/forcefield.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data/gromacs/gromos54a7_edited.ff 2023-08-16T00:03:22,569 copying build/lib/MDAnalysisTests/data/adk_oplsaa.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,627 copying build/lib/MDAnalysisTests/data/adk.psf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,642 copying build/lib/MDAnalysisTests/data/SINGLECONECT.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,643 copying build/lib/MDAnalysisTests/data/adk_oplsaa_LYS_janin.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,645 copying build/lib/MDAnalysisTests/data/incomplete.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,647 copying build/lib/MDAnalysisTests/data/cobrotoxin.xtc -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,652 copying build/lib/MDAnalysisTests/data/adk_closed.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,659 copying build/lib/MDAnalysisTests/data/adk_open.pqr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,665 copying build/lib/MDAnalysisTests/data/cobrotoxin.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,697 copying build/lib/MDAnalysisTests/data/adk_closed.dms -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,704 copying build/lib/MDAnalysisTests/data/adk_gbis_tmd-fast1_NAMD.dcd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,788 copying build/lib/MDAnalysisTests/data/example_longer.gsd -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,826 copying build/lib/MDAnalysisTests/data/align.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,828 copying build/lib/MDAnalysisTests/data/residwrap_0base.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,831 copying build/lib/MDAnalysisTests/data/model_then_cryst.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,833 copying build/lib/MDAnalysisTests/data/two_water_gro_nonames.gro -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,835 copying build/lib/MDAnalysisTests/data/adk_open.coor -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,838 copying build/lib/MDAnalysisTests/data/adk_oplsaa_rama.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,842 copying build/lib/MDAnalysisTests/data/namd_cgenff.pdb -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,845 copying build/lib/MDAnalysisTests/data/fullerene.pdb.gz -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:22,847 copying build/lib/MDAnalysisTests/data/adk_oplsaa.trr -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:23,030 copying build/lib/MDAnalysisTests/data/tip5p.itp -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:23,032 copying build/lib/MDAnalysisTests/data/argon_npt_compressed_vels_forces.tng -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:23,046 copying build/lib/MDAnalysisTests/data/molecule.sdf -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:23,048 copying build/lib/MDAnalysisTests/data/adk_oplsaa_GLY_rama.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:23,050 copying build/lib/MDAnalysisTests/data/adk_oplsaa_dihedral_list.npy -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/data 2023-08-16T00:03:23,053 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,054 copying build/lib/MDAnalysisTests/analysis/test_data.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,056 copying build/lib/MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,058 copying build/lib/MDAnalysisTests/analysis/test_bat.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,060 copying build/lib/MDAnalysisTests/analysis/test_dielectric.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,062 copying build/lib/MDAnalysisTests/analysis/test_rms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,065 copying build/lib/MDAnalysisTests/analysis/test_atomicdistances.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,067 copying build/lib/MDAnalysisTests/analysis/test_psa.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,069 copying build/lib/MDAnalysisTests/analysis/test_diffusionmap.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,071 copying build/lib/MDAnalysisTests/analysis/test_encore.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,075 copying build/lib/MDAnalysisTests/analysis/test_wbridge.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,077 copying build/lib/MDAnalysisTests/analysis/test_rdf_s.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,079 copying build/lib/MDAnalysisTests/analysis/test_contacts.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,082 copying build/lib/MDAnalysisTests/analysis/test_rdf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,084 copying build/lib/MDAnalysisTests/analysis/test_distances.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,086 copying build/lib/MDAnalysisTests/analysis/test_helix_analysis.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,088 copying build/lib/MDAnalysisTests/analysis/test_hole2.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,090 copying build/lib/MDAnalysisTests/analysis/test_nuclinfo.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,093 copying build/lib/MDAnalysisTests/analysis/test_waterdynamics.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,095 copying build/lib/MDAnalysisTests/analysis/test_density.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,097 copying build/lib/MDAnalysisTests/analysis/test_base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,100 copying build/lib/MDAnalysisTests/analysis/test_pca.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,102 copying build/lib/MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,105 copying build/lib/MDAnalysisTests/analysis/test_align.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,107 copying build/lib/MDAnalysisTests/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,108 copying build/lib/MDAnalysisTests/analysis/test_dihedrals.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,110 copying build/lib/MDAnalysisTests/analysis/test_nucleicacids.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,112 copying build/lib/MDAnalysisTests/analysis/test_leaflet.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,114 copying build/lib/MDAnalysisTests/analysis/test_lineardensity.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,117 copying build/lib/MDAnalysisTests/analysis/test_persistencelength.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,119 copying build/lib/MDAnalysisTests/analysis/test_msd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,121 copying build/lib/MDAnalysisTests/analysis/test_gnm.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,123 copying build/lib/MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/analysis 2023-08-16T00:03:23,126 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,127 copying build/lib/MDAnalysisTests/topology/test_pdbqt.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,129 copying build/lib/MDAnalysisTests/topology/test_pqr.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,131 copying build/lib/MDAnalysisTests/topology/test_gro.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,133 copying build/lib/MDAnalysisTests/topology/test_hoomdxml.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,135 copying build/lib/MDAnalysisTests/topology/test_mmtf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,137 copying build/lib/MDAnalysisTests/topology/test_crd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,139 copying build/lib/MDAnalysisTests/topology/base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,141 copying build/lib/MDAnalysisTests/topology/test_pdb.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,143 copying build/lib/MDAnalysisTests/topology/test_top.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,146 copying build/lib/MDAnalysisTests/topology/test_xpdb.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,147 copying build/lib/MDAnalysisTests/topology/test_gsd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,149 copying build/lib/MDAnalysisTests/topology/test_txyz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,152 copying build/lib/MDAnalysisTests/topology/test_psf.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,154 copying build/lib/MDAnalysisTests/topology/test_gms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,156 copying build/lib/MDAnalysisTests/topology/test_tprparser.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,158 copying build/lib/MDAnalysisTests/topology/test_topology_base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,160 copying build/lib/MDAnalysisTests/topology/test_dlpoly.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,162 copying build/lib/MDAnalysisTests/topology/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,163 copying build/lib/MDAnalysisTests/topology/test_mol2.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,165 copying build/lib/MDAnalysisTests/topology/test_guessers.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,168 copying build/lib/MDAnalysisTests/topology/test_minimal.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,170 copying build/lib/MDAnalysisTests/topology/test_itp.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,172 copying build/lib/MDAnalysisTests/topology/test_xyz.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,174 copying build/lib/MDAnalysisTests/topology/test_lammpsdata.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,177 copying build/lib/MDAnalysisTests/topology/test_altloc.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,179 copying build/lib/MDAnalysisTests/topology/test_fhiaims.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,180 copying build/lib/MDAnalysisTests/topology/test_dms.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,182 copying build/lib/MDAnalysisTests/topology/test_topology_str_types.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/topology 2023-08-16T00:03:23,184 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,185 copying build/lib/MDAnalysisTests/lib/test_distances.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,190 copying build/lib/MDAnalysisTests/lib/test_nsgrid.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,193 copying build/lib/MDAnalysisTests/lib/test_augment.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,195 copying build/lib/MDAnalysisTests/lib/test_pkdtree.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,198 copying build/lib/MDAnalysisTests/lib/test_cutil.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,199 copying build/lib/MDAnalysisTests/lib/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,201 copying build/lib/MDAnalysisTests/lib/test_util.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,205 copying build/lib/MDAnalysisTests/lib/test_log.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,207 copying build/lib/MDAnalysisTests/lib/test_neighborsearch.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/lib 2023-08-16T00:03:23,211 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,212 copying build/lib/MDAnalysisTests/core/test_accessors.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,214 copying build/lib/MDAnalysisTests/core/test_atom.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,217 copying build/lib/MDAnalysisTests/core/test_atomselections.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,220 copying build/lib/MDAnalysisTests/core/test_copying.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,223 copying build/lib/MDAnalysisTests/core/test_unwrap.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,226 copying build/lib/MDAnalysisTests/core/test_fragments.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,228 copying build/lib/MDAnalysisTests/core/test_requires.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,230 copying build/lib/MDAnalysisTests/core/test_atomgroup.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,234 copying build/lib/MDAnalysisTests/core/test_universe.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,238 copying build/lib/MDAnalysisTests/core/test_topologyobjects.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,241 copying build/lib/MDAnalysisTests/core/test_accumulate.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,243 copying build/lib/MDAnalysisTests/core/test_segment.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,245 copying build/lib/MDAnalysisTests/core/test_group_traj_access.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,248 copying build/lib/MDAnalysisTests/core/test_updating_atomgroup.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,251 copying build/lib/MDAnalysisTests/core/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,252 copying build/lib/MDAnalysisTests/core/test_segmentgroup.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,254 copying build/lib/MDAnalysisTests/core/test_residue.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,256 copying build/lib/MDAnalysisTests/core/test_topologyattrs.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,259 copying build/lib/MDAnalysisTests/core/test_groups.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,263 copying build/lib/MDAnalysisTests/core/test_wrap.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,266 copying build/lib/MDAnalysisTests/core/util.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,268 copying build/lib/MDAnalysisTests/core/test_topology.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,272 copying build/lib/MDAnalysisTests/core/test_index_dtype.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,274 copying build/lib/MDAnalysisTests/core/test_residuegroup.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/core 2023-08-16T00:03:23,277 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/formats 2023-08-16T00:03:23,278 copying build/lib/MDAnalysisTests/formats/test_libdcd.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/formats 2023-08-16T00:03:23,281 copying build/lib/MDAnalysisTests/formats/test_libmdaxdr.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/formats 2023-08-16T00:03:23,284 copying build/lib/MDAnalysisTests/formats/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/formats 2023-08-16T00:03:23,286 copying build/lib/MDAnalysisTests/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2023-08-16T00:03:23,288 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,290 copying build/lib/MDAnalysisTests/transformations/test_translate.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,293 copying build/lib/MDAnalysisTests/transformations/test_nojump.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,295 copying build/lib/MDAnalysisTests/transformations/test_base.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,297 copying build/lib/MDAnalysisTests/transformations/test_fit.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,300 copying build/lib/MDAnalysisTests/transformations/test_boxdimensions.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,302 copying build/lib/MDAnalysisTests/transformations/__init__.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,304 copying build/lib/MDAnalysisTests/transformations/test_rotate.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,306 copying build/lib/MDAnalysisTests/transformations/test_wrap.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,309 copying build/lib/MDAnalysisTests/transformations/test_positionaveraging.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests/transformations 2023-08-16T00:03:23,311 copying build/lib/MDAnalysisTests/util.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2023-08-16T00:03:23,313 copying build/lib/MDAnalysisTests/dummy.py -> build/bdist.linux-armv7l/wheel/MDAnalysisTests 2023-08-16T00:03:23,316 running install_egg_info 2023-08-16T00:03:23,376 running egg_info 2023-08-16T00:03:23,401 writing MDAnalysisTests.egg-info/PKG-INFO 2023-08-16T00:03:23,404 writing dependency_links to MDAnalysisTests.egg-info/dependency_links.txt 2023-08-16T00:03:23,406 writing requirements to MDAnalysisTests.egg-info/requires.txt 2023-08-16T00:03:23,408 writing top-level names to MDAnalysisTests.egg-info/top_level.txt 2023-08-16T00:03:23,533 reading manifest file 'MDAnalysisTests.egg-info/SOURCES.txt' 2023-08-16T00:03:23,552 reading manifest template 'MANIFEST.in' 2023-08-16T00:03:23,554 warning: no files found matching 'TODO' 2023-08-16T00:03:23,554 warning: no files found matching 'SUMMARY.txt' 2023-08-16T00:03:23,587 warning: no previously-included files matching '*~' found anywhere in distribution 2023-08-16T00:03:23,590 warning: no previously-included files matching '*.pkl' found anywhere in distribution 2023-08-16T00:03:23,591 adding license file 'LICENSE' 2023-08-16T00:03:23,591 adding license file 'AUTHORS' 2023-08-16T00:03:23,623 writing manifest file 'MDAnalysisTests.egg-info/SOURCES.txt' 2023-08-16T00:03:23,625 Copying MDAnalysisTests.egg-info to build/bdist.linux-armv7l/wheel/MDAnalysisTests-2.6.0-py3.9.egg-info 2023-08-16T00:03:23,637 running install_scripts 2023-08-16T00:03:23,654 creating build/bdist.linux-armv7l/wheel/MDAnalysisTests-2.6.0.dist-info/WHEEL 2023-08-16T00:03:23,656 creating '/tmp/pip-wheel-eaqegcsu/MDAnalysisTests-2.6.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-08-16T00:03:23,659 adding 'MDAnalysisTests/__init__.py' 2023-08-16T00:03:23,663 adding 'MDAnalysisTests/datafiles.py' 2023-08-16T00:03:23,666 adding 'MDAnalysisTests/dummy.py' 2023-08-16T00:03:23,668 adding 'MDAnalysisTests/test_api.py' 2023-08-16T00:03:23,670 adding 'MDAnalysisTests/util.py' 2023-08-16T00:03:23,672 adding 'MDAnalysisTests/analysis/__init__.py' 2023-08-16T00:03:23,675 adding 'MDAnalysisTests/analysis/test_align.py' 2023-08-16T00:03:23,677 adding 'MDAnalysisTests/analysis/test_atomicdistances.py' 2023-08-16T00:03:23,680 adding 'MDAnalysisTests/analysis/test_base.py' 2023-08-16T00:03:23,682 adding 'MDAnalysisTests/analysis/test_bat.py' 2023-08-16T00:03:23,684 adding 'MDAnalysisTests/analysis/test_contacts.py' 2023-08-16T00:03:23,686 adding 'MDAnalysisTests/analysis/test_data.py' 2023-08-16T00:03:23,689 adding 'MDAnalysisTests/analysis/test_density.py' 2023-08-16T00:03:23,690 adding 'MDAnalysisTests/analysis/test_dielectric.py' 2023-08-16T00:03:23,692 adding 'MDAnalysisTests/analysis/test_diffusionmap.py' 2023-08-16T00:03:23,694 adding 'MDAnalysisTests/analysis/test_dihedrals.py' 2023-08-16T00:03:23,696 adding 'MDAnalysisTests/analysis/test_distances.py' 2023-08-16T00:03:23,700 adding 'MDAnalysisTests/analysis/test_encore.py' 2023-08-16T00:03:23,702 adding 'MDAnalysisTests/analysis/test_gnm.py' 2023-08-16T00:03:23,705 adding 'MDAnalysisTests/analysis/test_helix_analysis.py' 2023-08-16T00:03:23,709 adding 'MDAnalysisTests/analysis/test_hole2.py' 2023-08-16T00:03:23,711 adding 'MDAnalysisTests/analysis/test_hydrogenbondautocorrel.py' 2023-08-16T00:03:23,713 adding 'MDAnalysisTests/analysis/test_hydrogenbondautocorrel_deprecated.py' 2023-08-16T00:03:23,716 adding 'MDAnalysisTests/analysis/test_hydrogenbonds_analysis.py' 2023-08-16T00:03:23,718 adding 'MDAnalysisTests/analysis/test_leaflet.py' 2023-08-16T00:03:23,720 adding 'MDAnalysisTests/analysis/test_lineardensity.py' 2023-08-16T00:03:23,722 adding 'MDAnalysisTests/analysis/test_msd.py' 2023-08-16T00:03:23,724 adding 'MDAnalysisTests/analysis/test_nucleicacids.py' 2023-08-16T00:03:23,726 adding 'MDAnalysisTests/analysis/test_nuclinfo.py' 2023-08-16T00:03:23,728 adding 'MDAnalysisTests/analysis/test_pca.py' 2023-08-16T00:03:23,730 adding 'MDAnalysisTests/analysis/test_persistencelength.py' 2023-08-16T00:03:23,732 adding 'MDAnalysisTests/analysis/test_psa.py' 2023-08-16T00:03:23,734 adding 'MDAnalysisTests/analysis/test_rdf.py' 2023-08-16T00:03:23,736 adding 'MDAnalysisTests/analysis/test_rdf_s.py' 2023-08-16T00:03:23,739 adding 'MDAnalysisTests/analysis/test_rms.py' 2023-08-16T00:03:23,741 adding 'MDAnalysisTests/analysis/test_waterdynamics.py' 2023-08-16T00:03:23,744 adding 'MDAnalysisTests/analysis/test_wbridge.py' 2023-08-16T00:03:23,746 adding 'MDAnalysisTests/auxiliary/__init__.py' 2023-08-16T00:03:23,749 adding 'MDAnalysisTests/auxiliary/base.py' 2023-08-16T00:03:23,751 adding 'MDAnalysisTests/auxiliary/test_core.py' 2023-08-16T00:03:23,754 adding 'MDAnalysisTests/auxiliary/test_edr.py' 2023-08-16T00:03:23,756 adding 'MDAnalysisTests/auxiliary/test_xvg.py' 2023-08-16T00:03:23,758 adding 'MDAnalysisTests/converters/__init__.py' 2023-08-16T00:03:23,760 adding 'MDAnalysisTests/converters/test_openmm.py' 2023-08-16T00:03:23,762 adding 'MDAnalysisTests/converters/test_openmm_parser.py' 2023-08-16T00:03:23,764 adding 'MDAnalysisTests/converters/test_parmed.py' 2023-08-16T00:03:23,766 adding 'MDAnalysisTests/converters/test_parmed_parser.py' 2023-08-16T00:03:23,770 adding 'MDAnalysisTests/converters/test_rdkit.py' 2023-08-16T00:03:23,772 adding 'MDAnalysisTests/converters/test_rdkit_parser.py' 2023-08-16T00:03:23,774 adding 'MDAnalysisTests/coordinates/__init__.py' 2023-08-16T00:03:23,778 adding 'MDAnalysisTests/coordinates/base.py' 2023-08-16T00:03:23,780 adding 'MDAnalysisTests/coordinates/reference.py' 2023-08-16T00:03:23,781 adding 'MDAnalysisTests/coordinates/test_amber_inpcrd.py' 2023-08-16T00:03:23,783 adding 'MDAnalysisTests/coordinates/test_chainreader.py' 2023-08-16T00:03:23,785 adding 'MDAnalysisTests/coordinates/test_chemfiles.py' 2023-08-16T00:03:23,787 adding 'MDAnalysisTests/coordinates/test_copying.py' 2023-08-16T00:03:23,789 adding 'MDAnalysisTests/coordinates/test_crd.py' 2023-08-16T00:03:23,791 adding 'MDAnalysisTests/coordinates/test_dcd.py' 2023-08-16T00:03:23,793 adding 'MDAnalysisTests/coordinates/test_dlpoly.py' 2023-08-16T00:03:23,794 adding 'MDAnalysisTests/coordinates/test_dms.py' 2023-08-16T00:03:23,796 adding 'MDAnalysisTests/coordinates/test_fhiaims.py' 2023-08-16T00:03:23,797 adding 'MDAnalysisTests/coordinates/test_gms.py' 2023-08-16T00:03:23,799 adding 'MDAnalysisTests/coordinates/test_gro.py' 2023-08-16T00:03:23,801 adding 'MDAnalysisTests/coordinates/test_gsd.py' 2023-08-16T00:03:23,805 adding 'MDAnalysisTests/coordinates/test_h5md.py' 2023-08-16T00:03:23,808 adding 'MDAnalysisTests/coordinates/test_lammps.py' 2023-08-16T00:03:23,810 adding 'MDAnalysisTests/coordinates/test_memory.py' 2023-08-16T00:03:23,811 adding 'MDAnalysisTests/coordinates/test_mmtf.py' 2023-08-16T00:03:23,813 adding 'MDAnalysisTests/coordinates/test_mol2.py' 2023-08-16T00:03:23,814 adding 'MDAnalysisTests/coordinates/test_namdbin.py' 2023-08-16T00:03:23,819 adding 'MDAnalysisTests/coordinates/test_netcdf.py' 2023-08-16T00:03:23,820 adding 'MDAnalysisTests/coordinates/test_null.py' 2023-08-16T00:03:23,826 adding 'MDAnalysisTests/coordinates/test_pdb.py' 2023-08-16T00:03:23,827 adding 'MDAnalysisTests/coordinates/test_pdbqt.py' 2023-08-16T00:03:23,829 adding 'MDAnalysisTests/coordinates/test_pqr.py' 2023-08-16T00:03:23,831 adding 'MDAnalysisTests/coordinates/test_reader_api.py' 2023-08-16T00:03:23,834 adding 'MDAnalysisTests/coordinates/test_timestep_api.py' 2023-08-16T00:03:23,836 adding 'MDAnalysisTests/coordinates/test_tng.py' 2023-08-16T00:03:23,837 adding 'MDAnalysisTests/coordinates/test_trj.py' 2023-08-16T00:03:23,839 adding 'MDAnalysisTests/coordinates/test_trz.py' 2023-08-16T00:03:23,841 adding 'MDAnalysisTests/coordinates/test_txyz.py' 2023-08-16T00:03:23,842 adding 'MDAnalysisTests/coordinates/test_windows.py' 2023-08-16T00:03:23,843 adding 'MDAnalysisTests/coordinates/test_writer_api.py' 2023-08-16T00:03:23,845 adding 'MDAnalysisTests/coordinates/test_writer_registration.py' 2023-08-16T00:03:23,849 adding 'MDAnalysisTests/coordinates/test_xdr.py' 2023-08-16T00:03:23,850 adding 'MDAnalysisTests/coordinates/test_xyz.py' 2023-08-16T00:03:23,852 adding 'MDAnalysisTests/core/__init__.py' 2023-08-16T00:03:23,854 adding 'MDAnalysisTests/core/test_accessors.py' 2023-08-16T00:03:23,855 adding 'MDAnalysisTests/core/test_accumulate.py' 2023-08-16T00:03:23,857 adding 'MDAnalysisTests/core/test_atom.py' 2023-08-16T00:03:23,863 adding 'MDAnalysisTests/core/test_atomgroup.py' 2023-08-16T00:03:23,870 adding 'MDAnalysisTests/core/test_atomselections.py' 2023-08-16T00:03:23,872 adding 'MDAnalysisTests/core/test_copying.py' 2023-08-16T00:03:23,873 adding 'MDAnalysisTests/core/test_fragments.py' 2023-08-16T00:03:23,876 adding 'MDAnalysisTests/core/test_group_traj_access.py' 2023-08-16T00:03:23,881 adding 'MDAnalysisTests/core/test_groups.py' 2023-08-16T00:03:23,883 adding 'MDAnalysisTests/core/test_index_dtype.py' 2023-08-16T00:03:23,884 adding 'MDAnalysisTests/core/test_requires.py' 2023-08-16T00:03:23,886 adding 'MDAnalysisTests/core/test_residue.py' 2023-08-16T00:03:23,888 adding 'MDAnalysisTests/core/test_residuegroup.py' 2023-08-16T00:03:23,889 adding 'MDAnalysisTests/core/test_segment.py' 2023-08-16T00:03:23,890 adding 'MDAnalysisTests/core/test_segmentgroup.py' 2023-08-16T00:03:23,893 adding 'MDAnalysisTests/core/test_topology.py' 2023-08-16T00:03:23,896 adding 'MDAnalysisTests/core/test_topologyattrs.py' 2023-08-16T00:03:23,899 adding 'MDAnalysisTests/core/test_topologyobjects.py' 2023-08-16T00:03:23,904 adding 'MDAnalysisTests/core/test_universe.py' 2023-08-16T00:03:23,906 adding 'MDAnalysisTests/core/test_unwrap.py' 2023-08-16T00:03:23,908 adding 'MDAnalysisTests/core/test_updating_atomgroup.py' 2023-08-16T00:03:23,910 adding 'MDAnalysisTests/core/test_wrap.py' 2023-08-16T00:03:23,913 adding 'MDAnalysisTests/core/util.py' 2023-08-16T00:03:23,918 adding 'MDAnalysisTests/data/173D.mmtf' 2023-08-16T00:03:23,945 adding 'MDAnalysisTests/data/19hc.pdb.gz' 2023-08-16T00:03:24,017 adding 'MDAnalysisTests/data/1A2C.pqr' 2023-08-16T00:03:24,031 adding 'MDAnalysisTests/data/1a28.pdb.gz' 2023-08-16T00:03:24,035 adding 'MDAnalysisTests/data/1grm_elNemo_mode7.pdb.bz2' 2023-08-16T00:03:24,039 adding 'MDAnalysisTests/data/1grm_single.pdb' 2023-08-16T00:03:24,070 adding 'MDAnalysisTests/data/1hvr.pdb' 2023-08-16T00:03:24,075 adding 'MDAnalysisTests/data/1osm.pdb.gz' 2023-08-16T00:03:24,077 adding 'MDAnalysisTests/data/1ubq-less-optional.mmtf' 2023-08-16T00:03:24,108 adding 'MDAnalysisTests/data/2r9r-1b.psf' 2023-08-16T00:03:24,229 adding 'MDAnalysisTests/data/2r9r-1b.xyz' 2023-08-16T00:03:24,241 adding 'MDAnalysisTests/data/2r9r-1b.xyz.bz2' 2023-08-16T00:03:24,243 adding 'MDAnalysisTests/data/3NJW-onlyrequired.mmtf' 2023-08-16T00:03:24,275 adding 'MDAnalysisTests/data/4E43.pdb' 2023-08-16T00:03:24,278 adding 'MDAnalysisTests/data/4x8u.pdbx' 2023-08-16T00:03:24,280 adding 'MDAnalysisTests/data/5KIH.mmtf.gz' 2023-08-16T00:03:24,287 adding 'MDAnalysisTests/data/5a7u.pdb' 2023-08-16T00:03:24,289 adding 'MDAnalysisTests/data/5digitResid.pdb' 2023-08-16T00:03:24,290 adding 'MDAnalysisTests/data/6QYR.mmtf.gz' 2023-08-16T00:03:24,307 adding 'MDAnalysisTests/data/6msm.pdb.bz2' 2023-08-16T00:03:24,310 adding 'MDAnalysisTests/data/A6PA6_alpha.pdb' 2023-08-16T00:03:24,312 adding 'MDAnalysisTests/data/C12x64.xml.bz2' 2023-08-16T00:03:24,313 adding 'MDAnalysisTests/data/CONECT2TER.pdb' 2023-08-16T00:03:24,315 adding 'MDAnalysisTests/data/RANDOM_WALK_TOPO.pdb' 2023-08-16T00:03:24,316 adding 'MDAnalysisTests/data/SINGLECONECT.pdb' 2023-08-16T00:03:24,326 adding 'MDAnalysisTests/data/SiN_tric_namd.dcd' 2023-08-16T00:03:24,395 adding 'MDAnalysisTests/data/SiN_tric_namd.psf' 2023-08-16T00:03:24,401 adding 'MDAnalysisTests/data/__init__.py' 2023-08-16T00:03:24,491 adding 'MDAnalysisTests/data/adk.psf' 2023-08-16T00:03:24,547 adding 'MDAnalysisTests/data/adk_closed.dms' 2023-08-16T00:03:24,588 adding 'MDAnalysisTests/data/adk_closed.pdb' 2023-08-16T00:03:24,679 adding 'MDAnalysisTests/data/adk_closed_NAMD.psf' 2023-08-16T00:03:24,735 adding 'MDAnalysisTests/data/adk_closed_domains.dms' 2023-08-16T00:03:24,790 adding 'MDAnalysisTests/data/adk_closed_no_segid.dms' 2023-08-16T00:03:25,381 adding 'MDAnalysisTests/data/adk_dims.dcd' 2023-08-16T00:03:26,083 adding 'MDAnalysisTests/data/adk_dims2.dcd' 2023-08-16T00:03:26,731 adding 'MDAnalysisTests/data/adk_gbis_tmd-fast1_NAMD.dcd' 2023-08-16T00:03:26,774 adding 'MDAnalysisTests/data/adk_notop.psf' 2023-08-16T00:03:26,793 adding 'MDAnalysisTests/data/adk_notop_BAD.psf' 2023-08-16T00:03:26,821 adding 'MDAnalysisTests/data/adk_open.coor' 2023-08-16T00:03:26,867 adding 'MDAnalysisTests/data/adk_open.crd' 2023-08-16T00:03:26,909 adding 'MDAnalysisTests/data/adk_open.pdb' 2023-08-16T00:03:26,952 adding 'MDAnalysisTests/data/adk_open.pqr' 2023-08-16T00:03:27,518 adding 'MDAnalysisTests/data/adk_oplsaa.gro' 2023-08-16T00:03:28,031 adding 'MDAnalysisTests/data/adk_oplsaa.pdb' 2023-08-16T00:03:28,389 adding 'MDAnalysisTests/data/adk_oplsaa.tpr' 2023-08-16T00:03:30,233 adding 'MDAnalysisTests/data/adk_oplsaa.trr' 2023-08-16T00:03:30,481 adding 'MDAnalysisTests/data/adk_oplsaa.xtc' 2023-08-16T00:03:30,494 adding 'MDAnalysisTests/data/adk_oplsaa_CA_rmsf.npy' 2023-08-16T00:03:30,496 adding 'MDAnalysisTests/data/adk_oplsaa_GLY_rama.npy' 2023-08-16T00:03:30,498 adding 'MDAnalysisTests/data/adk_oplsaa_LYS_janin.npy' 2023-08-16T00:03:30,499 adding 'MDAnalysisTests/data/adk_oplsaa_dihedral.npy' 2023-08-16T00:03:30,501 adding 'MDAnalysisTests/data/adk_oplsaa_dihedral_list.npy' 2023-08-16T00:03:30,504 adding 'MDAnalysisTests/data/adk_oplsaa_janin.npy' 2023-08-16T00:03:30,510 adding 'MDAnalysisTests/data/adk_oplsaa_rama.npy' 2023-08-16T00:03:30,511 adding 'MDAnalysisTests/data/align.pdb' 2023-08-16T00:03:30,515 adding 'MDAnalysisTests/data/argon_npt_compressed.gro.gz' 2023-08-16T00:03:30,560 adding 'MDAnalysisTests/data/argon_npt_compressed.tng' 2023-08-16T00:03:30,582 adding 'MDAnalysisTests/data/argon_npt_compressed_uneven.tng' 2023-08-16T00:03:30,672 adding 'MDAnalysisTests/data/argon_npt_compressed_vels_forces.tng' 2023-08-16T00:03:30,679 adding 'MDAnalysisTests/data/atomtypes.itp' 2023-08-16T00:03:30,681 adding 'MDAnalysisTests/data/atomtypes_charge.itp' 2023-08-16T00:03:30,902 adding 'MDAnalysisTests/data/aux_edr.tpr' 2023-08-16T00:03:30,963 adding 'MDAnalysisTests/data/aux_edr.xtc' 2023-08-16T00:03:30,968 adding 'MDAnalysisTests/data/aux_edr_raw.txt' 2023-08-16T00:03:30,970 adding 'MDAnalysisTests/data/bad_num_col.xvg' 2023-08-16T00:03:30,972 adding 'MDAnalysisTests/data/bad_top.top' 2023-08-16T00:03:31,124 adding 'MDAnalysisTests/data/bigbox.gro.bz2' 2023-08-16T00:03:31,133 adding 'MDAnalysisTests/data/chainIDnewres.pdb.gz' 2023-08-16T00:03:31,135 adding 'MDAnalysisTests/data/chainIDrepeat.pdb.gz' 2023-08-16T00:03:31,137 adding 'MDAnalysisTests/data/charges.pdb' 2023-08-16T00:03:31,460 adding 'MDAnalysisTests/data/cobrotoxin.h5md' 2023-08-16T00:03:31,683 adding 'MDAnalysisTests/data/cobrotoxin.pdb' 2023-08-16T00:03:31,811 adding 'MDAnalysisTests/data/cobrotoxin.tpr' 2023-08-16T00:03:32,123 adding 'MDAnalysisTests/data/cobrotoxin.trr' 2023-08-16T00:03:32,158 adding 'MDAnalysisTests/data/cobrotoxin.xtc' 2023-08-16T00:03:32,171 adding 'MDAnalysisTests/data/cobrotoxin_dry_neutral_0.pdb' 2023-08-16T00:03:32,178 adding 'MDAnalysisTests/data/cobrotoxin_protein_forces.xvg.bz2' 2023-08-16T00:03:32,180 adding 'MDAnalysisTests/data/conect_error.pdb' 2023-08-16T00:03:32,182 adding 'MDAnalysisTests/data/conect_parsing.pdb' 2023-08-16T00:03:32,183 adding 'MDAnalysisTests/data/cryst_then_model.pdb' 2023-08-16T00:03:32,185 adding 'MDAnalysisTests/data/cryst_then_model.pdb.bz2' 2023-08-16T00:03:32,187 adding 'MDAnalysisTests/data/cryst_then_model.pdb.gz' 2023-08-16T00:03:32,203 adding 'MDAnalysisTests/data/dppc_vesicle_hg.gro' 2023-08-16T00:03:32,207 adding 'MDAnalysisTests/data/edited_itp.itp' 2023-08-16T00:03:32,209 adding 'MDAnalysisTests/data/elements.pdb' 2023-08-16T00:03:32,210 adding 'MDAnalysisTests/data/empty.dcd' 2023-08-16T00:03:32,212 adding 'MDAnalysisTests/data/empty_atom.gro' 2023-08-16T00:03:32,244 adding 'MDAnalysisTests/data/example.gsd' 2023-08-16T00:03:32,253 adding 'MDAnalysisTests/data/example_bonds.gsd' 2023-08-16T00:03:32,393 adding 'MDAnalysisTests/data/example_longer.gsd' 2023-08-16T00:03:32,406 adding 'MDAnalysisTests/data/fhiaims.in' 2023-08-16T00:03:32,408 adding 'MDAnalysisTests/data/five.xyz' 2023-08-16T00:03:32,410 adding 'MDAnalysisTests/data/fullerene.pdb.gz' 2023-08-16T00:03:32,413 adding 'MDAnalysisTests/data/gromacs_ala10.itp' 2023-08-16T00:03:32,415 adding 'MDAnalysisTests/data/gromacs_ala10.top' 2023-08-16T00:03:32,416 adding 'MDAnalysisTests/data/grovels.gro' 2023-08-16T00:03:32,419 adding 'MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8.dat' 2023-08-16T00:03:32,421 adding 'MDAnalysisTests/data/helanal_bending_matrix_AdK_DIMS_H8_frames10to79.dat' 2023-08-16T00:03:32,423 adding 'MDAnalysisTests/data/huge_box.gro' 2023-08-16T00:03:32,425 adding 'MDAnalysisTests/data/incomplete.pdb' 2023-08-16T00:03:32,428 adding 'MDAnalysisTests/data/itp_nomass.itp' 2023-08-16T00:03:32,438 adding 'MDAnalysisTests/data/legacy_DCD_NAMD_coords.npy' 2023-08-16T00:03:32,450 adding 'MDAnalysisTests/data/legacy_DCD_adk_coords.npy' 2023-08-16T00:03:32,453 adding 'MDAnalysisTests/data/legacy_DCD_c36_coords.npy' 2023-08-16T00:03:32,455 adding 'MDAnalysisTests/data/make_whole.gro' 2023-08-16T00:03:32,551 adding 'MDAnalysisTests/data/martini_dppc_chol_bilayer.gro' 2023-08-16T00:03:32,555 adding 'MDAnalysisTests/data/mini.xyz' 2023-08-16T00:03:32,556 adding 'MDAnalysisTests/data/missing_atomname.gro' 2023-08-16T00:03:32,558 adding 'MDAnalysisTests/data/model_then_cryst.pdb' 2023-08-16T00:03:32,560 adding 'MDAnalysisTests/data/model_then_cryst.pdb.bz2' 2023-08-16T00:03:32,562 adding 'MDAnalysisTests/data/model_then_cryst.pdb.gz' 2023-08-16T00:03:32,563 adding 'MDAnalysisTests/data/mol2_comments_header_bat.npy' 2023-08-16T00:03:32,565 adding 'MDAnalysisTests/data/molecule.sdf' 2023-08-16T00:03:32,568 adding 'MDAnalysisTests/data/namd_cgenff.pdb' 2023-08-16T00:03:32,572 adding 'MDAnalysisTests/data/namd_cgenff.psf' 2023-08-16T00:03:32,675 adding 'MDAnalysisTests/data/nmr_neopetrosiamide.pdb' 2023-08-16T00:03:32,682 adding 'MDAnalysisTests/data/no_endif_spc.itp' 2023-08-16T00:03:32,684 adding 'MDAnalysisTests/data/nosegid.psf' 2023-08-16T00:03:32,686 adding 'MDAnalysisTests/data/nucl_res.pdb' 2023-08-16T00:03:32,689 adding 'MDAnalysisTests/data/parmed_ala3.psf' 2023-08-16T00:03:32,713 adding 'MDAnalysisTests/data/pdbqt_inputpdbqt.pdbqt' 2023-08-16T00:03:32,717 adding 'MDAnalysisTests/data/pdbqt_querypdb.pdb' 2023-08-16T00:03:32,926 adding 'MDAnalysisTests/data/plength.gro' 2023-08-16T00:03:32,933 adding 'MDAnalysisTests/data/residwrap.gro' 2023-08-16T00:03:32,936 adding 'MDAnalysisTests/data/residwrap_0base.gro' 2023-08-16T00:03:32,938 adding 'MDAnalysisTests/data/sameresid_diffresname.gro' 2023-08-16T00:03:32,939 adding 'MDAnalysisTests/data/sameresid_diffresname.pdb' 2023-08-16T00:03:32,941 adding 'MDAnalysisTests/data/sample_velocity_file.gro' 2023-08-16T00:03:32,943 adding 'MDAnalysisTests/data/single_frame.edr' 2023-08-16T00:03:32,944 adding 'MDAnalysisTests/data/spce.itp' 2023-08-16T00:03:32,946 adding 'MDAnalysisTests/data/surface.pdb.bz2' 2023-08-16T00:03:32,948 adding 'MDAnalysisTests/data/surface.trr' 2023-08-16T00:03:32,950 adding 'MDAnalysisTests/data/test.edr' 2023-08-16T00:03:32,952 adding 'MDAnalysisTests/data/test.fasta' 2023-08-16T00:03:32,953 adding 'MDAnalysisTests/data/test.xvg' 2023-08-16T00:03:32,955 adding 'MDAnalysisTests/data/testENT.ent' 2023-08-16T00:03:32,957 adding 'MDAnalysisTests/data/test_highf.xvg' 2023-08-16T00:03:32,958 adding 'MDAnalysisTests/data/test_lowf.xvg' 2023-08-16T00:03:32,965 adding 'MDAnalysisTests/data/tip125_tric_C36.dcd' 2023-08-16T00:03:32,971 adding 'MDAnalysisTests/data/tip125_tric_C36.psf' 2023-08-16T00:03:32,973 adding 'MDAnalysisTests/data/tip5p.itp' 2023-08-16T00:03:32,975 adding 'MDAnalysisTests/data/trr_test_only_10_frame_10_atoms.trr' 2023-08-16T00:03:33,029 adding 'MDAnalysisTests/data/trz_psf.psf' 2023-08-16T00:03:33,206 adding 'MDAnalysisTests/data/trzfile.trz' 2023-08-16T00:03:33,215 adding 'MDAnalysisTests/data/two_water_gro.gro' 2023-08-16T00:03:33,217 adding 'MDAnalysisTests/data/two_water_gro_multiframe.gro' 2023-08-16T00:03:33,218 adding 'MDAnalysisTests/data/two_water_gro_nonames.gro' 2023-08-16T00:03:33,220 adding 'MDAnalysisTests/data/two_water_gro_widebox.gro' 2023-08-16T00:03:33,227 adding 'MDAnalysisTests/data/unordered_res.pdb' 2023-08-16T00:03:33,229 adding 'MDAnalysisTests/data/varying_occ_tmp.pdb' 2023-08-16T00:03:33,231 adding 'MDAnalysisTests/data/watdyn.dcd' 2023-08-16T00:03:33,233 adding 'MDAnalysisTests/data/watdyn.psf' 2023-08-16T00:03:33,234 adding 'MDAnalysisTests/data/water_methane_acetic-acid_ammonia.pdb' 2023-08-16T00:03:33,236 adding 'MDAnalysisTests/data/xl_serial.pdb' 2023-08-16T00:03:33,238 adding 'MDAnalysisTests/data/xtc_test_only_10_frame_10_atoms.xtc' 2023-08-16T00:03:33,245 adding 'MDAnalysisTests/data/xyz_random_walk.xtc' 2023-08-16T00:03:33,248 adding 'MDAnalysisTests/data/Amber/ace_mbondi3.error1.parm7' 2023-08-16T00:03:33,249 adding 'MDAnalysisTests/data/Amber/ace_mbondi3.error2.parm7' 2023-08-16T00:03:33,251 adding 'MDAnalysisTests/data/Amber/ace_mbondi3.error3.parm7' 2023-08-16T00:03:33,253 adding 'MDAnalysisTests/data/Amber/ace_mbondi3.nc' 2023-08-16T00:03:33,255 adding 'MDAnalysisTests/data/Amber/ace_mbondi3.negative.parm7' 2023-08-16T00:03:33,257 adding 'MDAnalysisTests/data/Amber/ace_mbondi3.parm7' 2023-08-16T00:03:33,325 adding 'MDAnalysisTests/data/Amber/ace_tip3p.nc' 2023-08-16T00:03:33,341 adding 'MDAnalysisTests/data/Amber/ace_tip3p.parm7' 2023-08-16T00:03:33,365 adding 'MDAnalysisTests/data/Amber/ache.mdcrd' 2023-08-16T00:03:33,369 adding 'MDAnalysisTests/data/Amber/ache.mdcrd.bz2' 2023-08-16T00:03:33,382 adding 'MDAnalysisTests/data/Amber/ache.prmtop' 2023-08-16T00:03:33,384 adding 'MDAnalysisTests/data/Amber/ala.ff19SB.OPC.parm7.bz2' 2023-08-16T00:03:33,467 adding 'MDAnalysisTests/data/Amber/anti.top' 2023-08-16T00:03:33,612 adding 'MDAnalysisTests/data/Amber/anti_md1.mdcrd.bz2' 2023-08-16T00:03:33,909 adding 'MDAnalysisTests/data/Amber/bala.ncdf' 2023-08-16T00:03:33,940 adding 'MDAnalysisTests/data/Amber/bala.prmtop' 2023-08-16T00:03:34,633 adding 'MDAnalysisTests/data/Amber/bala.trj' 2023-08-16T00:03:34,687 adding 'MDAnalysisTests/data/Amber/capped-ala.mdcrd.bz2' 2023-08-16T00:03:34,729 adding 'MDAnalysisTests/data/Amber/capped-ala.prmtop' 2023-08-16T00:03:34,745 adding 'MDAnalysisTests/data/Amber/chitosan.prmtop' 2023-08-16T00:03:34,748 adding 'MDAnalysisTests/data/Amber/cpptraj_traj.nc' 2023-08-16T00:03:34,754 adding 'MDAnalysisTests/data/Amber/cpptraj_traj.prmtop' 2023-08-16T00:03:34,780 adding 'MDAnalysisTests/data/Amber/parmed_ala2_solv.parm7' 2023-08-16T00:03:34,808 adding 'MDAnalysisTests/data/Amber/parmed_ala2_solv.rst7' 2023-08-16T00:03:34,825 adding 'MDAnalysisTests/data/Amber/parmed_fad.prmtop' 2023-08-16T00:03:34,843 adding 'MDAnalysisTests/data/Amber/posfor.ncdf' 2023-08-16T00:03:34,865 adding 'MDAnalysisTests/data/Amber/posfor.top' 2023-08-16T00:03:34,868 adding 'MDAnalysisTests/data/Amber/test.inpcrd' 2023-08-16T00:03:34,977 adding 'MDAnalysisTests/data/Amber/tz2.truncoct.nc' 2023-08-16T00:03:34,987 adding 'MDAnalysisTests/data/Amber/tz2.truncoct.parm7.bz2' 2023-08-16T00:03:35,023 adding 'MDAnalysisTests/data/analysis/1k5i_c36.pdb.gz' 2023-08-16T00:03:35,046 adding 'MDAnalysisTests/data/analysis/1k5i_c36.psf.gz' 2023-08-16T00:03:35,170 adding 'MDAnalysisTests/data/analysis/YiiP_lipids.gro.gz' 2023-08-16T00:03:35,266 adding 'MDAnalysisTests/data/analysis/YiiP_lipids.xtc' 2023-08-16T00:03:35,273 adding 'MDAnalysisTests/data/analysis/align_bound.pdb.gz' 2023-08-16T00:03:35,275 adding 'MDAnalysisTests/data/analysis/align_unbound.pdb.gz' 2023-08-16T00:03:35,278 adding 'MDAnalysisTests/data/capping/aaqaa.gro' 2023-08-16T00:03:35,279 adding 'MDAnalysisTests/data/capping/ace.pdb' 2023-08-16T00:03:35,282 adding 'MDAnalysisTests/data/capping/maestro_aaqaa_capped.pdb' 2023-08-16T00:03:35,283 adding 'MDAnalysisTests/data/capping/nma.pdb' 2023-08-16T00:03:35,286 adding 'MDAnalysisTests/data/contacts/2F4K_qlist5_remap.dat' 2023-08-16T00:03:35,299 adding 'MDAnalysisTests/data/contacts/villin_folded.gro.bz2' 2023-08-16T00:03:35,312 adding 'MDAnalysisTests/data/contacts/villin_unfolded.gro.bz2' 2023-08-16T00:03:35,315 adding 'MDAnalysisTests/data/coordinates/README.md' 2023-08-16T00:03:35,316 adding 'MDAnalysisTests/data/coordinates/create_data.py' 2023-08-16T00:03:35,318 adding 'MDAnalysisTests/data/coordinates/create_h5md_data.py' 2023-08-16T00:03:35,319 adding 'MDAnalysisTests/data/coordinates/new_hexane.arc' 2023-08-16T00:03:35,321 adding 'MDAnalysisTests/data/coordinates/test.arc' 2023-08-16T00:03:35,322 adding 'MDAnalysisTests/data/coordinates/test.dcd' 2023-08-16T00:03:35,324 adding 'MDAnalysisTests/data/coordinates/test.gro' 2023-08-16T00:03:35,325 adding 'MDAnalysisTests/data/coordinates/test.gro.bz2' 2023-08-16T00:03:35,329 adding 'MDAnalysisTests/data/coordinates/test.h5md' 2023-08-16T00:03:35,332 adding 'MDAnalysisTests/data/coordinates/test.tng' 2023-08-16T00:03:35,333 adding 'MDAnalysisTests/data/coordinates/test.trr' 2023-08-16T00:03:35,335 adding 'MDAnalysisTests/data/coordinates/test.txyz' 2023-08-16T00:03:35,336 adding 'MDAnalysisTests/data/coordinates/test.xtc' 2023-08-16T00:03:35,338 adding 'MDAnalysisTests/data/coordinates/test.xyz' 2023-08-16T00:03:35,340 adding 'MDAnalysisTests/data/coordinates/test.xyz.bz2' 2023-08-16T00:03:35,341 adding 'MDAnalysisTests/data/coordinates/test_incomplete_vel.gro' 2023-08-16T00:03:35,342 adding 'MDAnalysisTests/data/coordinates/test_topology.pdb' 2023-08-16T00:03:35,350 adding 'MDAnalysisTests/data/dlpoly/CONFIG' 2023-08-16T00:03:35,352 adding 'MDAnalysisTests/data/dlpoly/CONFIG_minimal' 2023-08-16T00:03:35,354 adding 'MDAnalysisTests/data/dlpoly/CONFIG_order' 2023-08-16T00:03:35,377 adding 'MDAnalysisTests/data/dlpoly/HISTORY' 2023-08-16T00:03:35,380 adding 'MDAnalysisTests/data/dlpoly/HISTORY_classic' 2023-08-16T00:03:35,382 adding 'MDAnalysisTests/data/dlpoly/HISTORY_minimal' 2023-08-16T00:03:35,383 adding 'MDAnalysisTests/data/dlpoly/HISTORY_minimal_cell' 2023-08-16T00:03:35,385 adding 'MDAnalysisTests/data/dlpoly/HISTORY_order' 2023-08-16T00:03:35,389 adding 'MDAnalysisTests/data/gms/c1opt.gms.gz' 2023-08-16T00:03:35,393 adding 'MDAnalysisTests/data/gms/surf2wat.gms' 2023-08-16T00:03:35,400 adding 'MDAnalysisTests/data/gms/symopt.gms' 2023-08-16T00:03:35,403 adding 'MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ff_dum.itp' 2023-08-16T00:03:35,406 adding 'MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffbonded.itp' 2023-08-16T00:03:35,425 adding 'MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ffnonbonded.itp' 2023-08-16T00:03:35,427 adding 'MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/forcefield.itp' 2023-08-16T00:03:35,429 adding 'MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/ions.itp' 2023-08-16T00:03:35,430 adding 'MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/spc.itp' 2023-08-16T00:03:35,432 adding 'MDAnalysisTests/data/gromacs/gromos54a7_edited.ff/test.itp' 2023-08-16T00:03:35,435 adding 'MDAnalysisTests/data/lammps/a_lot_of_bond_types.data' 2023-08-16T00:03:35,437 adding 'MDAnalysisTests/data/lammps/albite_triclinic.data' 2023-08-16T00:03:35,438 adding 'MDAnalysisTests/data/lammps/albite_triclinic.dump' 2023-08-16T00:03:35,440 adding 'MDAnalysisTests/data/lammps/chain_dump_1.lammpstrj' 2023-08-16T00:03:35,442 adding 'MDAnalysisTests/data/lammps/chain_dump_2.lammpstrj' 2023-08-16T00:03:35,444 adding 'MDAnalysisTests/data/lammps/chain_initial.data' 2023-08-16T00:03:35,492 adding 'MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data' 2023-08-16T00:03:35,540 adding 'MDAnalysisTests/data/lammps/cnt-hexagonal-class1.data2' 2023-08-16T00:03:36,434 adding 'MDAnalysisTests/data/lammps/datatest.data' 2023-08-16T00:03:36,520 adding 'MDAnalysisTests/data/lammps/datatest.trz' 2023-08-16T00:03:36,525 adding 'MDAnalysisTests/data/lammps/deletedatoms.data' 2023-08-16T00:03:36,527 adding 'MDAnalysisTests/data/lammps/hydrogen-class1.data' 2023-08-16T00:03:36,528 adding 'MDAnalysisTests/data/lammps/hydrogen-class1.data2' 2023-08-16T00:03:36,562 adding 'MDAnalysisTests/data/lammps/ifabp_apo_100mM.data.bz2' 2023-08-16T00:03:36,696 adding 'MDAnalysisTests/data/lammps/ifabp_apo_100mM.dcd' 2023-08-16T00:03:36,702 adding 'MDAnalysisTests/data/lammps/ifabp_apo_100mM.in' 2023-08-16T00:03:36,704 adding 'MDAnalysisTests/data/lammps/image_vf.data' 2023-08-16T00:03:36,705 adding 'MDAnalysisTests/data/lammps/image_vf.lammpstrj' 2023-08-16T00:03:36,707 adding 'MDAnalysisTests/data/lammps/mini.data' 2023-08-16T00:03:36,713 adding 'MDAnalysisTests/data/lammps/pairij_coeffs.data.bz2' 2023-08-16T00:03:36,939 adding 'MDAnalysisTests/data/lammps/spce_all_coords.lammpstrj.bz2' 2023-08-16T00:03:36,952 adding 'MDAnalysisTests/data/lammps/spce_no_coords.lammpstrj.bz2' 2023-08-16T00:03:36,954 adding 'MDAnalysisTests/data/lammps/wat.lammpstrj.bz2' 2023-08-16T00:03:36,956 adding 'MDAnalysisTests/data/lammps/wat.lammpstrj_long.bz2' 2023-08-16T00:03:36,958 adding 'MDAnalysisTests/data/merge/2zmm/ligand.pdb' 2023-08-16T00:03:36,993 adding 'MDAnalysisTests/data/merge/2zmm/protein.pdb' 2023-08-16T00:03:36,998 adding 'MDAnalysisTests/data/merge/2zmm/water.pdb' 2023-08-16T00:03:37,000 adding 'MDAnalysisTests/data/mol2/BrokenMolecule.mol2' 2023-08-16T00:03:37,006 adding 'MDAnalysisTests/data/mol2/Ligand.mol2' 2023-08-16T00:03:37,008 adding 'MDAnalysisTests/data/mol2/Molecule.mol2' 2023-08-16T00:03:37,010 adding 'MDAnalysisTests/data/mol2/Molecule_comments_header.mol2' 2023-08-16T00:03:37,096 adding 'MDAnalysisTests/data/mol2/Molecules.mol2' 2023-08-16T00:03:37,103 adding 'MDAnalysisTests/data/mol2/sodium_ion.mol2' 2023-08-16T00:03:37,105 adding 'MDAnalysisTests/data/mol2/zinc_856218.mol2' 2023-08-16T00:03:37,207 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2016.tpr' 2023-08-16T00:03:37,311 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2018.tpr' 2023-08-16T00:03:37,416 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2019-beta3.tpr' 2023-08-16T00:03:37,574 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2020-beta2.tpr' 2023-08-16T00:03:37,687 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2020.tpr' 2023-08-16T00:03:37,802 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2020_double.tpr' 2023-08-16T00:03:37,906 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2021.tpr' 2023-08-16T00:03:38,021 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2021_double.tpr' 2023-08-16T00:03:38,125 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2022-rc1.tpr' 2023-08-16T00:03:38,229 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_2023.tpr' 2023-08-16T00:03:38,333 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.2.tpr' 2023-08-16T00:03:38,437 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.3.tpr' 2023-08-16T00:03:38,541 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.4.tpr' 2023-08-16T00:03:38,646 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.5.tpr' 2023-08-16T00:03:38,750 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.6.tpr' 2023-08-16T00:03:38,854 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.7.tpr' 2023-08-16T00:03:38,958 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.0.tpr' 2023-08-16T00:03:39,062 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.1.tpr' 2023-08-16T00:03:39,167 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.2.tpr' 2023-08-16T00:03:39,271 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.3.tpr' 2023-08-16T00:03:39,376 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.4.tpr' 2023-08-16T00:03:39,480 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.5.tpr' 2023-08-16T00:03:39,585 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_4.5.tpr' 2023-08-16T00:03:39,689 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_5.0.2.tpr' 2023-08-16T00:03:39,794 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_5.0.4.tpr' 2023-08-16T00:03:39,899 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_5.0.5.tpr' 2023-08-16T00:03:40,003 adding 'MDAnalysisTests/data/tprs/2lyz_gmx_5.1.tpr' 2023-08-16T00:03:40,324 adding 'MDAnalysisTests/data/tprs/ab42_gmx_4.6.1.tpr' 2023-08-16T00:03:40,653 adding 'MDAnalysisTests/data/tprs/ab42_gmx_4.6.tpr' 2023-08-16T00:03:40,939 adding 'MDAnalysisTests/data/tprs/drew_gmx_4.5.5.double.tpr' 2023-08-16T00:03:40,950 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy.gro' 2023-08-16T00:03:40,951 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy.mdp' 2023-08-16T00:03:40,952 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy.top' 2023-08-16T00:03:40,954 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2016.tpr' 2023-08-16T00:03:40,955 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2018.mdp' 2023-08-16T00:03:40,957 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2018.tpr' 2023-08-16T00:03:40,958 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2019-beta3.tpr' 2023-08-16T00:03:40,960 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2020-beta2.tpr' 2023-08-16T00:03:40,962 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2020.tpr' 2023-08-16T00:03:40,963 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2020_double.tpr' 2023-08-16T00:03:40,965 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2021.tpr' 2023-08-16T00:03:40,967 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2021_double.tpr' 2023-08-16T00:03:40,969 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2022-rc1.tpr' 2023-08-16T00:03:40,971 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_2023.tpr' 2023-08-16T00:03:40,972 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.top' 2023-08-16T00:03:40,975 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_3.3.4.tpr' 2023-08-16T00:03:40,977 adding 'MDAnalysisTests/data/tprs/all_bonded/dummy_5.1.tpr' 2023-08-16T00:03:40,981 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2016.3.tpr' 2023-08-16T00:03:40,983 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2018.tpr' 2023-08-16T00:03:40,986 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2020.tpr' 2023-08-16T00:03:40,988 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2021.tpr' 2023-08-16T00:03:40,991 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2022-rc1.tpr' 2023-08-16T00:03:40,993 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-2023.tpr' 2023-08-16T00:03:40,995 adding 'MDAnalysisTests/data/tprs/virtual_sites/extra-interactions-4.0.7.tpr' 2023-08-16T00:03:40,997 adding 'MDAnalysisTests/data/windows/README.md' 2023-08-16T00:03:41,021 adding 'MDAnalysisTests/data/windows/WIN_HISTORY' 2023-08-16T00:03:41,045 adding 'MDAnalysisTests/data/windows/WIN_ache.mdcrd' 2023-08-16T00:03:41,149 adding 'MDAnalysisTests/data/windows/WIN_nmr_neopetrosiamide.pdb' 2023-08-16T00:03:41,155 adding 'MDAnalysisTests/data/windows/WIN_test.arc' 2023-08-16T00:03:41,157 adding 'MDAnalysisTests/data/windows/WIN_wat.lammpstrj' 2023-08-16T00:03:41,158 adding 'MDAnalysisTests/formats/__init__.py' 2023-08-16T00:03:41,161 adding 'MDAnalysisTests/formats/test_libdcd.py' 2023-08-16T00:03:41,163 adding 'MDAnalysisTests/formats/test_libmdaxdr.py' 2023-08-16T00:03:41,165 adding 'MDAnalysisTests/import/__init__.py' 2023-08-16T00:03:41,166 adding 'MDAnalysisTests/import/fork_called.py' 2023-08-16T00:03:41,167 adding 'MDAnalysisTests/import/test_import.py' 2023-08-16T00:03:41,169 adding 'MDAnalysisTests/lib/__init__.py' 2023-08-16T00:03:41,170 adding 'MDAnalysisTests/lib/test_augment.py' 2023-08-16T00:03:41,172 adding 'MDAnalysisTests/lib/test_cutil.py' 2023-08-16T00:03:41,179 adding 'MDAnalysisTests/lib/test_distances.py' 2023-08-16T00:03:41,181 adding 'MDAnalysisTests/lib/test_log.py' 2023-08-16T00:03:41,182 adding 'MDAnalysisTests/lib/test_neighborsearch.py' 2023-08-16T00:03:41,185 adding 'MDAnalysisTests/lib/test_nsgrid.py' 2023-08-16T00:03:41,186 adding 'MDAnalysisTests/lib/test_pkdtree.py' 2023-08-16T00:03:41,195 adding 'MDAnalysisTests/lib/test_util.py' 2023-08-16T00:03:41,197 adding 'MDAnalysisTests/topology/__init__.py' 2023-08-16T00:03:41,199 adding 'MDAnalysisTests/topology/base.py' 2023-08-16T00:03:41,200 adding 'MDAnalysisTests/topology/test_altloc.py' 2023-08-16T00:03:41,201 adding 'MDAnalysisTests/topology/test_crd.py' 2023-08-16T00:03:41,202 adding 'MDAnalysisTests/topology/test_dlpoly.py' 2023-08-16T00:03:41,204 adding 'MDAnalysisTests/topology/test_dms.py' 2023-08-16T00:03:41,205 adding 'MDAnalysisTests/topology/test_fhiaims.py' 2023-08-16T00:03:41,206 adding 'MDAnalysisTests/topology/test_gms.py' 2023-08-16T00:03:41,208 adding 'MDAnalysisTests/topology/test_gro.py' 2023-08-16T00:03:41,209 adding 'MDAnalysisTests/topology/test_gsd.py' 2023-08-16T00:03:41,211 adding 'MDAnalysisTests/topology/test_guessers.py' 2023-08-16T00:03:41,212 adding 'MDAnalysisTests/topology/test_hoomdxml.py' 2023-08-16T00:03:41,214 adding 'MDAnalysisTests/topology/test_itp.py' 2023-08-16T00:03:41,216 adding 'MDAnalysisTests/topology/test_lammpsdata.py' 2023-08-16T00:03:41,217 adding 'MDAnalysisTests/topology/test_minimal.py' 2023-08-16T00:03:41,219 adding 'MDAnalysisTests/topology/test_mmtf.py' 2023-08-16T00:03:41,220 adding 'MDAnalysisTests/topology/test_mol2.py' 2023-08-16T00:03:41,222 adding 'MDAnalysisTests/topology/test_pdb.py' 2023-08-16T00:03:41,224 adding 'MDAnalysisTests/topology/test_pdbqt.py' 2023-08-16T00:03:41,225 adding 'MDAnalysisTests/topology/test_pqr.py' 2023-08-16T00:03:41,227 adding 'MDAnalysisTests/topology/test_psf.py' 2023-08-16T00:03:41,229 adding 'MDAnalysisTests/topology/test_top.py' 2023-08-16T00:03:41,230 adding 'MDAnalysisTests/topology/test_topology_base.py' 2023-08-16T00:03:41,232 adding 'MDAnalysisTests/topology/test_topology_str_types.py' 2023-08-16T00:03:41,234 adding 'MDAnalysisTests/topology/test_tprparser.py' 2023-08-16T00:03:41,235 adding 'MDAnalysisTests/topology/test_txyz.py' 2023-08-16T00:03:41,236 adding 'MDAnalysisTests/topology/test_xpdb.py' 2023-08-16T00:03:41,238 adding 'MDAnalysisTests/topology/test_xyz.py' 2023-08-16T00:03:41,240 adding 'MDAnalysisTests/transformations/__init__.py' 2023-08-16T00:03:41,241 adding 'MDAnalysisTests/transformations/test_base.py' 2023-08-16T00:03:41,242 adding 'MDAnalysisTests/transformations/test_boxdimensions.py' 2023-08-16T00:03:41,244 adding 'MDAnalysisTests/transformations/test_fit.py' 2023-08-16T00:03:41,245 adding 'MDAnalysisTests/transformations/test_nojump.py' 2023-08-16T00:03:41,247 adding 'MDAnalysisTests/transformations/test_positionaveraging.py' 2023-08-16T00:03:41,248 adding 'MDAnalysisTests/transformations/test_rotate.py' 2023-08-16T00:03:41,250 adding 'MDAnalysisTests/transformations/test_translate.py' 2023-08-16T00:03:41,251 adding 'MDAnalysisTests/transformations/test_wrap.py' 2023-08-16T00:03:41,253 adding 'MDAnalysisTests/utils/__init__.py' 2023-08-16T00:03:41,255 adding 'MDAnalysisTests/utils/test_authors.py' 2023-08-16T00:03:41,256 adding 'MDAnalysisTests/utils/test_datafiles.py' 2023-08-16T00:03:41,257 adding 'MDAnalysisTests/utils/test_duecredit.py' 2023-08-16T00:03:41,259 adding 'MDAnalysisTests/utils/test_failure.py' 2023-08-16T00:03:41,260 adding 'MDAnalysisTests/utils/test_imports.py' 2023-08-16T00:03:41,261 adding 'MDAnalysisTests/utils/test_log.py' 2023-08-16T00:03:41,263 adding 'MDAnalysisTests/utils/test_meta.py' 2023-08-16T00:03:41,264 adding 'MDAnalysisTests/utils/test_modelling.py' 2023-08-16T00:03:41,266 adding 'MDAnalysisTests/utils/test_persistence.py' 2023-08-16T00:03:41,267 adding 'MDAnalysisTests/utils/test_pickleio.py' 2023-08-16T00:03:41,269 adding 'MDAnalysisTests/utils/test_qcprot.py' 2023-08-16T00:03:41,271 adding 'MDAnalysisTests/utils/test_selections.py' 2023-08-16T00:03:41,273 adding 'MDAnalysisTests/utils/test_streamio.py' 2023-08-16T00:03:41,276 adding 'MDAnalysisTests/utils/test_transformations.py' 2023-08-16T00:03:41,278 adding 'MDAnalysisTests/utils/test_units.py' 2023-08-16T00:03:41,279 adding 'MDAnalysisTests/visualization/__init__.py' 2023-08-16T00:03:41,281 adding 'MDAnalysisTests/visualization/test_streamlines.py' 2023-08-16T00:03:41,283 adding 'MDAnalysisTests-2.6.0.dist-info/AUTHORS' 2023-08-16T00:03:41,287 adding 'MDAnalysisTests-2.6.0.dist-info/LICENSE' 2023-08-16T00:03:41,289 adding 'MDAnalysisTests-2.6.0.dist-info/METADATA' 2023-08-16T00:03:41,290 adding 'MDAnalysisTests-2.6.0.dist-info/WHEEL' 2023-08-16T00:03:41,291 adding 'MDAnalysisTests-2.6.0.dist-info/top_level.txt' 2023-08-16T00:03:41,299 adding 'MDAnalysisTests-2.6.0.dist-info/RECORD' 2023-08-16T00:03:41,868 removing build/bdist.linux-armv7l/wheel 2023-08-16T00:03:42,095 Building wheel for mdanalysistests (setup.py): finished with status 'done' 2023-08-16T00:03:42,642 Created wheel for mdanalysistests: filename=MDAnalysisTests-2.6.0-py3-none-any.whl size=55740241 sha256=2dde1a871955bd58dac7e546838e58e23978e13c53e87404711278511fbbad62 2023-08-16T00:03:42,643 Stored in directory: /tmp/pip-ephem-wheel-cache-brl1p7o1/wheels/54/9a/5b/276b9aacf32f82a96fb69ac892a038ae1f523d0ce40802a484 2023-08-16T00:03:42,687 Successfully built mdanalysistests 2023-08-16T00:03:44,027 Removed build tracker: '/tmp/pip-build-tracker-bk3ic37t'