2023-09-08T18:48:13,985 Created temporary directory: /tmp/pip-build-tracker-feg1o4ov 2023-09-08T18:48:13,986 Initialized build tracking at /tmp/pip-build-tracker-feg1o4ov 2023-09-08T18:48:13,987 Created build tracker: /tmp/pip-build-tracker-feg1o4ov 2023-09-08T18:48:13,987 Entered build tracker: /tmp/pip-build-tracker-feg1o4ov 2023-09-08T18:48:13,988 Created temporary directory: /tmp/pip-wheel-b6v1acrc 2023-09-08T18:48:13,991 Created temporary directory: /tmp/pip-ephem-wheel-cache-rbebv1ts 2023-09-08T18:48:14,012 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-08T18:48:14,016 2 location(s) to search for versions of khmer: 2023-09-08T18:48:14,016 * https://pypi.org/simple/khmer/ 2023-09-08T18:48:14,016 * https://www.piwheels.org/simple/khmer/ 2023-09-08T18:48:14,017 Fetching project page and analyzing links: https://pypi.org/simple/khmer/ 2023-09-08T18:48:14,017 Getting page https://pypi.org/simple/khmer/ 2023-09-08T18:48:14,019 Found index url https://pypi.org/simple/ 2023-09-08T18:48:14,159 Fetched page https://pypi.org/simple/khmer/ as application/vnd.pypi.simple.v1+json 2023-09-08T18:48:14,167 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/a5/8e/d814af49f243e9628cc68cf9a89a290fa761a1acdfbf4044e69bb5f3185b/khmer-0.6-py2.7-linux-x86_64.egg (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,168 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/f1/61/71c0e5b337f3fb110d22314a90985f58d2a643c8fe701dd832f7a3b3cbe7/khmer-0.6-py2.7-macosx-10.8-intel.egg (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,168 Found link https://files.pythonhosted.org/packages/b9/d6/e343a534406110221eb690dc3ffa7548f03f2d51c4d9d407bf2e72278861/khmer-0.6.tar.gz (from https://pypi.org/simple/khmer/), version: 0.6 2023-09-08T18:48:14,169 Found link https://files.pythonhosted.org/packages/81/89/085bcb663ac1bd3a0b363b5a1de8f5a1c7d3b10e4a3ec197c976c2911ab9/khmer-0.6.1.tar.gz (from https://pypi.org/simple/khmer/), version: 0.6.1 2023-09-08T18:48:14,170 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/74/ff/a33663f83fd01cd5ffc9903d8116bd3dfc065f1f865db5c91b080991690b/khmer-0.7-cp27-none-macosx_10_8_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,170 Found link https://files.pythonhosted.org/packages/3a/bd/b1eb804f77e6ea99f9db02688c1474628d844e2f59a4f77d7bc00f8c990b/khmer-0.7.tar.gz (from https://pypi.org/simple/khmer/), version: 0.7 2023-09-08T18:48:14,171 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/d5/8b/ae021e29186d3f9ed8cfdd4f8a81db44f7d4105446dc9e119afd908eea21/khmer-0.7.1-cp27-none-macosx_10_8_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,172 Found link https://files.pythonhosted.org/packages/92/11/b17b809e155f35cfc17710ea67b7515b6025e141de6506a4af4e32e32b70/khmer-0.7.1.tar.gz (from https://pypi.org/simple/khmer/), version: 0.7.1 2023-09-08T18:48:14,172 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/84/a8/09ee794b0db1cc2b113a4f2f56beb325769389c35b48f802289d67297e24/khmer-0.8-cp27-none-macosx_10_9_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,173 Found link https://files.pythonhosted.org/packages/31/8f/7063987e7713dfbcd05bc53e4778c2284e3ea905112fc97d83d03afa60d9/khmer-0.8.tar.gz (from https://pypi.org/simple/khmer/), version: 0.8 2023-09-08T18:48:14,174 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/4e/6c/33badfa2550b73b7f037afa2e37aa09b7506b5dbd58175b0c24f40ed8179/khmer-1.0-cp27-none-macosx_10_9_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,174 Found link https://files.pythonhosted.org/packages/67/d0/334f8bba7befb5d671bf5663d1073c73cba841f13088d6426b93dbb884ce/khmer-1.0.tar.gz (from https://pypi.org/simple/khmer/), version: 1.0 2023-09-08T18:48:14,175 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/fd/a6/5b64bad521c070581ecb1f22ecfcb33d2b297ec353094438d807028e4be0/khmer-1.0.1-cp27-none-macosx_10_9_x86_64.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,175 Found link https://files.pythonhosted.org/packages/4e/73/cebb5f4952d79693ddd5c8a9efac21883f1b4cdff1d046adb2df1f2070bd/khmer-1.0.1.tar.gz (from https://pypi.org/simple/khmer/), version: 1.0.1 2023-09-08T18:48:14,176 Found link https://files.pythonhosted.org/packages/df/66/250be153108b73fa745d22b0e141d6d922cd011b6cda2233d46d34bcc596/khmer-1.1.tar.gz (from https://pypi.org/simple/khmer/), version: 1.1 2023-09-08T18:48:14,177 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/6d/0b/97e3dd8339736c4f4ebf3906274bcf972b2d308bb76db1702c187bfbd9fd/khmer-1.2-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,177 Found link https://files.pythonhosted.org/packages/b8/b5/8143587dd5eba9204dea9eab50b990656b70e03538a44af56eec11a28f02/khmer-1.2.tar.gz (from https://pypi.org/simple/khmer/), version: 1.2 2023-09-08T18:48:14,178 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/41/7a/d94ad453d04782d82aebe7825ef4f1a38fc9e3374b0b3cfe9b1c5400482e/khmer-1.3-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,178 Found link https://files.pythonhosted.org/packages/6c/cf/37bd5901fe1322b59cd2cece9c53661944e18dddba3e8ebf2aa2d7834113/khmer-1.3.tar.gz (from https://pypi.org/simple/khmer/), version: 1.3 2023-09-08T18:48:14,179 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/89/b4/310a7e99bac77a488cc482f4184480aa803f65bad8ffacb961c94f819335/khmer-1.4-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,179 Found link https://files.pythonhosted.org/packages/5a/91/eb0c9a5fdab42699c56b8c60d0d02e806f4d4d42f809061eb9a1a9a59dfa/khmer-1.4.tar.gz (from https://pypi.org/simple/khmer/), version: 1.4 2023-09-08T18:48:14,180 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/5c/44/1d4273abe1bf162cd1a8c8d5424cec23e65971f90951659a0b590beaf364/khmer-1.4.1-cp27-none-macosx_10_10_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,181 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/96/b7/76a047a594778ad4d2646754e4454ac9d484b7e64548ebed24362c5aba4f/khmer-1.4.1-cp27-none-macosx_10_6_x86_64.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,181 Found link https://files.pythonhosted.org/packages/5e/16/15243a0612c798595e8dd8bdf0477a7ce065929b9de5dbfebdf461006f05/khmer-1.4.1.tar.gz (from https://pypi.org/simple/khmer/), version: 1.4.1 2023-09-08T18:48:14,182 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/5d/f6/791f79f68be58cb20c6426726063d742b3dd778b222873cb9f01ab65bc09/khmer-2.0-cp27-none-macosx_10_6_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,182 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/22/37/6c6fb54d9b8feb8a64e52e6e16cd409bc47d8240294caf8449fac6523f64/khmer-2.0-cp33-cp33m-macosx_10_6_x86_64.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,183 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/69/21/de9ff69a24a90e6f4e788b57a6d911b046cbc768436060c18a0c18c2e187/khmer-2.0-cp34-cp34m-macosx_10_6_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,184 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/36/cb/4a1638d5ca5a9b0d53c1b5484cefdcda9f3079bfb0b92e2ae2fac6d83bfd/khmer-2.0-cp35-cp35m-macosx_10_6_intel.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,184 Found link https://files.pythonhosted.org/packages/52/3b/2c52a13937197391775f274ed75b4a33b2d7767a904faaf4032e14e10a55/khmer-2.0.tar.gz (from https://pypi.org/simple/khmer/), version: 2.0 2023-09-08T18:48:14,185 Found link https://files.pythonhosted.org/packages/57/17/a1f05b13895e02cadeac06d61f7ea63e8c32eda38312d57e9ba218d0ca9b/khmer-2.1rc3.tar.gz (from https://pypi.org/simple/khmer/), version: 2.1rc3 2023-09-08T18:48:14,186 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/c9/bb/8cccf9bf31082b3d78aa628ca62e8603f81de83b7a5056f0ce026cfb50fd/khmer-2.1-cp36-cp36m-macosx_10_12_x86_64.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,186 Found link https://files.pythonhosted.org/packages/3e/e5/b3190cb9def69d665b42cd91ea27712f1d7de643f4b9c66ef2e5f1ab29c6/khmer-2.1.tar.gz (from https://pypi.org/simple/khmer/), version: 2.1 2023-09-08T18:48:14,187 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/d3/55/d3f5da570677903679e0c40aa4b93323853ebe15e75944b4a0d7d25d11c8/khmer-2.1.1-cp27-cp27m-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,187 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/40/5a/328d310361d98bb2f29361128eaa2493f44b51997d6837c72f1766c4ec7b/khmer-2.1.1-cp27-cp27mu-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,188 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/34/a5/f3815d5ec3ee20f884f140ae4a2f253ae6d59885684fa8adc5525a9ed4f4/khmer-2.1.1-cp35-cp35m-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,188 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/5f/7a/dd356f3b267d2adf079deebdd94590e42edbc376a2058759ff78ee6a75c5/khmer-2.1.1-cp36-cp36m-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,188 Skipping link: No binaries permitted for khmer: https://files.pythonhosted.org/packages/3f/1e/931281ac388cbb15d40319d0dcd54cfc3f1d972da5de2fa3063facedc966/khmer-2.1.1-cp37-cp37m-manylinux1_x86_64.whl (from https://pypi.org/simple/khmer/) 2023-09-08T18:48:14,189 Found link https://files.pythonhosted.org/packages/78/c9/caee0a310f249c86fd351706d2513e197e036231f4db6f3bda7a363ea1c4/khmer-2.1.1.tar.gz (from https://pypi.org/simple/khmer/), version: 2.1.1 2023-09-08T18:48:14,190 Fetching project page and analyzing links: https://www.piwheels.org/simple/khmer/ 2023-09-08T18:48:14,190 Getting page https://www.piwheels.org/simple/khmer/ 2023-09-08T18:48:14,192 Found index url https://www.piwheels.org/simple/ 2023-09-08T18:48:14,490 Fetched page https://www.piwheels.org/simple/khmer/ as text/html 2023-09-08T18:48:14,491 Skipping link: not a file: https://www.piwheels.org/simple/khmer/ 2023-09-08T18:48:14,492 Skipping link: not a file: https://pypi.org/simple/khmer/ 2023-09-08T18:48:14,512 Given no hashes to check 1 links for project 'khmer': discarding no candidates 2023-09-08T18:48:14,530 Collecting khmer==2.0 2023-09-08T18:48:14,532 Created temporary directory: /tmp/pip-unpack-6yuodnt8 2023-09-08T18:48:15,173 Downloading khmer-2.0.tar.gz (8.5 MB) 2023-09-08T18:48:20,282 Added khmer==2.0 from https://files.pythonhosted.org/packages/52/3b/2c52a13937197391775f274ed75b4a33b2d7767a904faaf4032e14e10a55/khmer-2.0.tar.gz to build tracker '/tmp/pip-build-tracker-feg1o4ov' 2023-09-08T18:48:20,284 Running setup.py (path:/tmp/pip-wheel-b6v1acrc/khmer_d5caaa8299d141228d0ac27b42477f0d/setup.py) egg_info for package khmer 2023-09-08T18:48:20,285 Created temporary directory: /tmp/pip-pip-egg-info-e521cuio 2023-09-08T18:48:20,286 Preparing metadata (setup.py): started 2023-09-08T18:48:20,287 Running command python setup.py egg_info 2023-09-08T18:48:21,408 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-08T18:48:21,409 !! 2023-09-08T18:48:21,410 ******************************************************************************** 2023-09-08T18:48:21,411 Usage of dash-separated 'include-dirs' will not be supported in future 2023-09-08T18:48:21,411 versions. Please use the underscore name 'include_dirs' instead. 2023-09-08T18:48:21,412 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-08T18:48:21,413 or your builds will no longer be supported. 2023-09-08T18:48:21,414 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-08T18:48:21,415 ******************************************************************************** 2023-09-08T18:48:21,415 !! 2023-09-08T18:48:21,416 opt = self.warn_dash_deprecation(opt, section) 2023-09-08T18:48:21,598 running egg_info 2023-09-08T18:48:21,599 creating /tmp/pip-pip-egg-info-e521cuio/khmer.egg-info 2023-09-08T18:48:21,625 writing /tmp/pip-pip-egg-info-e521cuio/khmer.egg-info/PKG-INFO 2023-09-08T18:48:21,630 writing dependency_links to /tmp/pip-pip-egg-info-e521cuio/khmer.egg-info/dependency_links.txt 2023-09-08T18:48:21,633 writing requirements to /tmp/pip-pip-egg-info-e521cuio/khmer.egg-info/requires.txt 2023-09-08T18:48:21,634 writing top-level names to /tmp/pip-pip-egg-info-e521cuio/khmer.egg-info/top_level.txt 2023-09-08T18:48:21,635 writing manifest file '/tmp/pip-pip-egg-info-e521cuio/khmer.egg-info/SOURCES.txt' 2023-09-08T18:48:21,718 reading manifest file '/tmp/pip-pip-egg-info-e521cuio/khmer.egg-info/SOURCES.txt' 2023-09-08T18:48:21,719 reading manifest template 'MANIFEST.in' 2023-09-08T18:48:24,562 warning: no previously-included files found matching 'third-party/zlib/Makefile' 2023-09-08T18:48:24,563 warning: no previously-included files found matching 'third-party/zlib/zconf.h' 2023-09-08T18:48:24,568 warning: no files found matching 'README.txt' under directory 'scripts' 2023-09-08T18:48:24,577 warning: no previously-included files matching '*.orig' found anywhere in distribution 2023-09-08T18:48:24,579 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-09-08T18:48:24,580 adding license file 'LICENSE' 2023-09-08T18:48:24,603 writing manifest file '/tmp/pip-pip-egg-info-e521cuio/khmer.egg-info/SOURCES.txt' 2023-09-08T18:48:24,714 Preparing metadata (setup.py): finished with status 'done' 2023-09-08T18:48:24,718 Source in /tmp/pip-wheel-b6v1acrc/khmer_d5caaa8299d141228d0ac27b42477f0d has version 2.0, which satisfies requirement khmer==2.0 from https://files.pythonhosted.org/packages/52/3b/2c52a13937197391775f274ed75b4a33b2d7767a904faaf4032e14e10a55/khmer-2.0.tar.gz 2023-09-08T18:48:24,719 Removed khmer==2.0 from https://files.pythonhosted.org/packages/52/3b/2c52a13937197391775f274ed75b4a33b2d7767a904faaf4032e14e10a55/khmer-2.0.tar.gz from build tracker '/tmp/pip-build-tracker-feg1o4ov' 2023-09-08T18:48:24,723 Created temporary directory: /tmp/pip-unpack-5uoqyaju 2023-09-08T18:48:24,724 Created temporary directory: /tmp/pip-unpack-c08phckl 2023-09-08T18:48:24,741 Building wheels for collected packages: khmer 2023-09-08T18:48:24,746 Created temporary directory: /tmp/pip-wheel-av2o0xne 2023-09-08T18:48:24,746 Building wheel for khmer (setup.py): started 2023-09-08T18:48:24,748 Destination directory: /tmp/pip-wheel-av2o0xne 2023-09-08T18:48:24,748 Running command python setup.py bdist_wheel 2023-09-08T18:48:25,818 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-08T18:48:25,818 !! 2023-09-08T18:48:25,820 ******************************************************************************** 2023-09-08T18:48:25,820 Usage of dash-separated 'include-dirs' will not be supported in future 2023-09-08T18:48:25,821 versions. Please use the underscore name 'include_dirs' instead. 2023-09-08T18:48:25,822 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-08T18:48:25,822 or your builds will no longer be supported. 2023-09-08T18:48:25,824 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-08T18:48:25,824 ******************************************************************************** 2023-09-08T18:48:25,826 !! 2023-09-08T18:48:25,826 opt = self.warn_dash_deprecation(opt, section) 2023-09-08T18:48:26,004 running bdist_wheel 2023-09-08T18:48:26,051 running build 2023-09-08T18:48:26,052 got version from file /tmp/pip-wheel-b6v1acrc/khmer_d5caaa8299d141228d0ac27b42477f0d/khmer/_version.py {'version': '2.0', 'full': 'c2cc671127b97083e87989c0822ea036dd8202dc'} 2023-09-08T18:48:26,053 running build_py 2023-09-08T18:48:26,080 creating build 2023-09-08T18:48:26,080 creating build/lib.linux-armv7l-cpython-311 2023-09-08T18:48:26,081 creating build/lib.linux-armv7l-cpython-311/khmer 2023-09-08T18:48:26,082 copying khmer/_version.py -> build/lib.linux-armv7l-cpython-311/khmer 2023-09-08T18:48:26,084 copying khmer/khmer_args.py -> build/lib.linux-armv7l-cpython-311/khmer 2023-09-08T18:48:26,087 copying khmer/khmer_logger.py -> build/lib.linux-armv7l-cpython-311/khmer 2023-09-08T18:48:26,089 copying khmer/kfile.py -> build/lib.linux-armv7l-cpython-311/khmer 2023-09-08T18:48:26,092 copying khmer/thread_utils.py -> build/lib.linux-armv7l-cpython-311/khmer 2023-09-08T18:48:26,094 copying khmer/__init__.py -> build/lib.linux-armv7l-cpython-311/khmer 2023-09-08T18:48:26,097 copying khmer/utils.py -> build/lib.linux-armv7l-cpython-311/khmer 2023-09-08T18:48:26,100 creating build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,102 copying tests/test_script_arguments.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,104 copying tests/test_functions.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,107 copying tests/test_filter.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,109 copying tests/test_graph.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,111 copying tests/test_scripts.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,117 copying tests/test_read_aligner.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,120 copying tests/test_subset_graph.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,123 copying tests/test_sandbox_scripts.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,125 copying tests/test_version.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,127 copying tests/test_nodegraph.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,130 copying tests/test_normalize_by_median.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,133 copying tests/__init__.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,135 copying tests/test_read_parsers.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,138 copying tests/test_labelhash.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,140 copying tests/test_countgraph.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,144 copying tests/test_streaming_io.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,146 copying tests/test_oxli_functions.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,149 copying tests/test_counting_single.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,151 copying tests/test_lump.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,153 copying tests/test_hll.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,156 copying tests/test_threaded_sequence_processor.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,158 copying tests/khmer_tst_utils.py -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:26,161 creating build/lib.linux-armv7l-cpython-311/oxli 2023-09-08T18:48:26,162 copying oxli/__init__.py -> build/lib.linux-armv7l-cpython-311/oxli 2023-09-08T18:48:26,165 copying oxli/functions.py -> build/lib.linux-armv7l-cpython-311/oxli 2023-09-08T18:48:26,167 copying oxli/build_graph.py -> build/lib.linux-armv7l-cpython-311/oxli 2023-09-08T18:48:26,169 running egg_info 2023-09-08T18:48:26,203 creating khmer.egg-info 2023-09-08T18:48:26,228 writing khmer.egg-info/PKG-INFO 2023-09-08T18:48:26,234 writing dependency_links to khmer.egg-info/dependency_links.txt 2023-09-08T18:48:26,236 writing requirements to khmer.egg-info/requires.txt 2023-09-08T18:48:26,238 writing top-level names to khmer.egg-info/top_level.txt 2023-09-08T18:48:26,239 writing manifest file 'khmer.egg-info/SOURCES.txt' 2023-09-08T18:48:26,273 reading manifest file 'khmer.egg-info/SOURCES.txt' 2023-09-08T18:48:26,275 reading manifest template 'MANIFEST.in' 2023-09-08T18:48:29,031 warning: no previously-included files found matching 'third-party/zlib/Makefile' 2023-09-08T18:48:29,032 warning: no previously-included files found matching 'third-party/zlib/zconf.h' 2023-09-08T18:48:29,037 warning: no files found matching 'README.txt' under directory 'scripts' 2023-09-08T18:48:29,045 warning: no previously-included files matching '*.orig' found anywhere in distribution 2023-09-08T18:48:29,047 warning: no previously-included files matching '*.pyc' found anywhere in distribution 2023-09-08T18:48:29,048 adding license file 'LICENSE' 2023-09-08T18:48:29,071 writing manifest file 'khmer.egg-info/SOURCES.txt' 2023-09-08T18:48:29,105 copying khmer/_khmer.cc -> build/lib.linux-armv7l-cpython-311/khmer 2023-09-08T18:48:29,110 copying tests/.gitignore -> build/lib.linux-armv7l-cpython-311/khmer/tests 2023-09-08T18:48:29,112 creating build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,113 copying tests/test-data/100-reads.fq.bz2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,116 copying tests/test-data/100-reads.fq.gz -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,119 copying tests/test-data/100-reads.fq.truncated.bz2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,121 copying tests/test-data/100-reads.fq.truncated.gz -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,123 copying tests/test-data/all-A.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,125 copying tests/test-data/badversion-k12.ct -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,128 copying tests/test-data/badversion-k12.ht -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,130 copying tests/test-data/badversion-k32.stoptags -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,132 copying tests/test-data/badversion-k32.tagset -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,134 copying tests/test-data/biglump-random-20-a.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,137 copying tests/test-data/casava_18-pe.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,139 copying tests/test-data/combine_parts_1.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,142 copying tests/test-data/dn-test-all-paired-all-keep.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,144 copying tests/test-data/dn-test-none-paired.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,146 copying tests/test-data/dn-test-some-paired-all-keep.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,149 copying tests/test-data/empty-file -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,152 copying tests/test-data/empty-file.bz2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,155 copying tests/test-data/empty-file.gz -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,157 copying tests/test-data/fakelump.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,160 copying tests/test-data/fakelump.fa.stoptags.txt -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,163 copying tests/test-data/filter-test-A.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,165 copying tests/test-data/filter-test-B.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,168 copying tests/test-data/goodversion-k12.ht -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,170 copying tests/test-data/goodversion-k12.ht.gz -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,172 copying tests/test-data/goodversion-k32.stoptags -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,175 copying tests/test-data/goodversion-k32.tagset -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,177 copying tests/test-data/multi-output.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,179 copying tests/test-data/normC20k20.ct -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,293 copying tests/test-data/old-style-format-w-comments.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,295 copying tests/test-data/paired-broken.fq.1 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,297 copying tests/test-data/paired-broken.fq.2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,299 copying tests/test-data/paired-broken.fq.badleft -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,301 copying tests/test-data/paired-broken.fq.badright -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,303 copying tests/test-data/paired-broken.fq.paired_bad -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,304 copying tests/test-data/paired-broken2.fq.1 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,306 copying tests/test-data/paired-broken2.fq.2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,309 copying tests/test-data/paired-broken3.fq.1 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,311 copying tests/test-data/paired-broken3.fq.2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,313 copying tests/test-data/paired-broken4.fq.1 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,315 copying tests/test-data/paired-broken4.fq.2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,317 copying tests/test-data/paired-mixed-2.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,319 copying tests/test-data/paired-mixed-broken.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,321 copying tests/test-data/paired-mixed.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,323 copying tests/test-data/paired-mixed.fa.pe -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,325 copying tests/test-data/paired-mixed.fa.se -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,327 copying tests/test-data/paired-mixed.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,329 copying tests/test-data/paired-mixed.fq.pe -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,331 copying tests/test-data/paired-mixed.fq.se -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,333 copying tests/test-data/paired-slash1.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,335 copying tests/test-data/paired-slash1.fq.1 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,337 copying tests/test-data/paired-slash1.fq.2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,339 copying tests/test-data/paired.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,341 copying tests/test-data/paired.fa.1 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,343 copying tests/test-data/paired.fa.2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,345 copying tests/test-data/paired.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,346 copying tests/test-data/paired.fq.1 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,348 copying tests/test-data/paired.fq.2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,350 copying tests/test-data/paired_one.base.dif.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,352 copying tests/test-data/random-20-X2.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,355 copying tests/test-data/random-20-a.even.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,357 copying tests/test-data/random-20-a.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,360 copying tests/test-data/random-20-a.fa.bz2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,362 copying tests/test-data/random-20-a.fa.gz -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,364 copying tests/test-data/random-20-a.fa.part -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,366 copying tests/test-data/random-20-a.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,368 copying tests/test-data/random-20-a.fq.bz2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,370 copying tests/test-data/random-20-a.fq.gz -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,372 copying tests/test-data/random-20-a.odd.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,374 copying tests/test-data/random-20-b.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,377 copying tests/test-data/random-31-c.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,380 copying tests/test-data/readaligner-default.json -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,382 copying tests/test-data/readaligner-k12.json -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,384 copying tests/test-data/real-partition-small.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,386 copying tests/test-data/real-partition-tiny.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,388 copying tests/test-data/single-read.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,390 copying tests/test-data/test-abund-read-2.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,393 copying tests/test-data/test-abund-read-2.fa.bz2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,395 copying tests/test-data/test-abund-read-2.fa.gz -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,396 copying tests/test-data/test-abund-read-2.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,400 copying tests/test-data/test-abund-read-2.paired.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,402 copying tests/test-data/test-abund-read-2.paired2.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,404 copying tests/test-data/test-abund-read-3.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,406 copying tests/test-data/test-abund-read-impaired.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,408 copying tests/test-data/test-abund-read-paired.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,410 copying tests/test-data/test-abund-read-paired.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,411 copying tests/test-data/test-abund-read.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,413 copying tests/test-data/test-empty.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,415 copying tests/test-data/test-empty.fa.bz2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,416 copying tests/test-data/test-error-reads.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,419 copying tests/test-data/test-fastq-n-reads.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,422 copying tests/test-data/test-fastq-reads.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,424 copying tests/test-data/test-fastq-reads.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,426 copying tests/test-data/test-filter-abund-Ns.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,428 copying tests/test-data/test-graph.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,430 copying tests/test-data/test-graph2.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,432 copying tests/test-data/test-graph5.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,434 copying tests/test-data/test-labels.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,436 copying tests/test-data/test-large.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,603 copying tests/test-data/test-multi.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,605 copying tests/test-data/test-output-partitions.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,607 copying tests/test-data/test-overlap1.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,630 copying tests/test-data/test-overlap2.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,655 copying tests/test-data/test-reads.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,701 copying tests/test-data/test-reads.fq.bz2 -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,713 copying tests/test-data/test-reads.fq.gz -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,727 copying tests/test-data/test-short.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,729 copying tests/test-data/test-sweep-contigs.fp -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,731 copying tests/test-data/test-sweep-reads.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,733 copying tests/test-data/test-sweep-reads.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,735 copying tests/test-data/test-transcript.fa -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,737 copying tests/test-data/truncated.fq -> build/lib.linux-armv7l-cpython-311/khmer/tests/test-data 2023-09-08T18:48:29,741 running build_ext 2023-09-08T18:48:29,742 error: ['khmer', 'khmer.tests', 'oxli'] require 64-bit operating system 2023-09-08T18:48:29,854 ERROR: [present-rich] python setup.py bdist_wheel exited with 1 2023-09-08T18:48:29,867 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2023-09-08T18:48:29,867 exec(compile('"'"''"'"''"'"' 2023-09-08T18:48:29,867 # This is -- a caller that pip uses to run setup.py 2023-09-08T18:48:29,867 # 2023-09-08T18:48:29,867 # - It imports setuptools before invoking setup.py, to enable projects that directly 2023-09-08T18:48:29,867 # import from `distutils.core` to work with newer packaging standards. 2023-09-08T18:48:29,867 # - It provides a clear error message when setuptools is not installed. 2023-09-08T18:48:29,867 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2023-09-08T18:48:29,867 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2023-09-08T18:48:29,867 # manifest_maker: standard file '"'"'-c'"'"' not found". 2023-09-08T18:48:29,867 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2023-09-08T18:48:29,867 import os, sys, tokenize 2023-09-08T18:48:29,867 2023-09-08T18:48:29,867 try: 2023-09-08T18:48:29,867 import setuptools 2023-09-08T18:48:29,867 except ImportError as error: 2023-09-08T18:48:29,867 print( 2023-09-08T18:48:29,867 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2023-09-08T18:48:29,867 "the build environment.", 2023-09-08T18:48:29,867 file=sys.stderr, 2023-09-08T18:48:29,867 ) 2023-09-08T18:48:29,867 sys.exit(1) 2023-09-08T18:48:29,867 2023-09-08T18:48:29,867 __file__ = %r 2023-09-08T18:48:29,867 sys.argv[0] = __file__ 2023-09-08T18:48:29,867 2023-09-08T18:48:29,867 if os.path.exists(__file__): 2023-09-08T18:48:29,867 filename = __file__ 2023-09-08T18:48:29,867 with tokenize.open(__file__) as f: 2023-09-08T18:48:29,867 setup_py_code = f.read() 2023-09-08T18:48:29,867 else: 2023-09-08T18:48:29,867 filename = "" 2023-09-08T18:48:29,867 setup_py_code = "from setuptools import setup; setup()" 2023-09-08T18:48:29,867 2023-09-08T18:48:29,867 exec(compile(setup_py_code, filename, "exec")) 2023-09-08T18:48:29,867 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-b6v1acrc/khmer_d5caaa8299d141228d0ac27b42477f0d/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-av2o0xne[/] 2023-09-08T18:48:29,867 [bold magenta]cwd[/]: /tmp/pip-wheel-b6v1acrc/khmer_d5caaa8299d141228d0ac27b42477f0d/ 2023-09-08T18:48:29,868 Building wheel for khmer (setup.py): finished with status 'error' 2023-09-08T18:48:29,869 ERROR: Failed building wheel for khmer 2023-09-08T18:48:29,871 Running setup.py clean for khmer 2023-09-08T18:48:29,872 Running command python setup.py clean 2023-09-08T18:48:30,923 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-08T18:48:30,923 !! 2023-09-08T18:48:30,924 ******************************************************************************** 2023-09-08T18:48:30,925 Usage of dash-separated 'include-dirs' will not be supported in future 2023-09-08T18:48:30,926 versions. Please use the underscore name 'include_dirs' instead. 2023-09-08T18:48:30,927 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-08T18:48:30,927 or your builds will no longer be supported. 2023-09-08T18:48:30,928 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-08T18:48:30,929 ******************************************************************************** 2023-09-08T18:48:30,930 !! 2023-09-08T18:48:30,930 opt = self.warn_dash_deprecation(opt, section) 2023-09-08T18:48:31,109 running clean 2023-09-08T18:48:31,132 removing 'build/lib.linux-armv7l-cpython-311' (and everything under it) 2023-09-08T18:48:31,179 'build/bdist.linux-armv7l' does not exist -- can't clean it 2023-09-08T18:48:31,180 'build/scripts-3.11' does not exist -- can't clean it 2023-09-08T18:48:31,180 removing 'build' 2023-09-08T18:48:31,289 Failed to build khmer 2023-09-08T18:48:31,290 ERROR: Failed to build one or more wheels 2023-09-08T18:48:31,292 Exception information: 2023-09-08T18:48:31,292 Traceback (most recent call last): 2023-09-08T18:48:31,292 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-08T18:48:31,292 status = run_func(*args) 2023-09-08T18:48:31,292 ^^^^^^^^^^^^^^^ 2023-09-08T18:48:31,292 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-08T18:48:31,292 return func(self, options, args) 2023-09-08T18:48:31,292 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-08T18:48:31,292 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-09-08T18:48:31,292 raise CommandError("Failed to build one or more wheels") 2023-09-08T18:48:31,292 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-09-08T18:48:31,295 Removed build tracker: '/tmp/pip-build-tracker-feg1o4ov'