2023-09-09T22:35:51,860 Created temporary directory: /tmp/pip-build-tracker-_o6ljyv8
2023-09-09T22:35:51,861 Initialized build tracking at /tmp/pip-build-tracker-_o6ljyv8
2023-09-09T22:35:51,861 Created build tracker: /tmp/pip-build-tracker-_o6ljyv8
2023-09-09T22:35:51,862 Entered build tracker: /tmp/pip-build-tracker-_o6ljyv8
2023-09-09T22:35:51,862 Created temporary directory: /tmp/pip-wheel-p8kkbqtb
2023-09-09T22:35:51,865 Created temporary directory: /tmp/pip-ephem-wheel-cache-rtf71m3h
2023-09-09T22:35:51,889 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-09T22:35:51,892 2 location(s) to search for versions of pydensecrf:
2023-09-09T22:35:51,892 * https://pypi.org/simple/pydensecrf/
2023-09-09T22:35:51,892 * https://www.piwheels.org/simple/pydensecrf/
2023-09-09T22:35:51,893 Fetching project page and analyzing links: https://pypi.org/simple/pydensecrf/
2023-09-09T22:35:51,894 Getting page https://pypi.org/simple/pydensecrf/
2023-09-09T22:35:51,895 Found index url https://pypi.org/simple/
2023-09-09T22:35:52,035 Fetched page https://pypi.org/simple/pydensecrf/ as application/vnd.pypi.simple.v1+json
2023-09-09T22:35:52,037   Found link https://files.pythonhosted.org/packages/87/40/8bca500342914f83d35da61fd7be0c47955156bee87683a6aa1d0e8e040a/pydensecrf-1.0rc1.tar.gz (from https://pypi.org/simple/pydensecrf/), version: 1.0rc1
2023-09-09T22:35:52,037   Found link https://files.pythonhosted.org/packages/dd/11/7a79e817078323893f8071bb3fda1f45e34e443ec4a0790f8542158bbced/pydensecrf-1.0rc2.tar.gz (from https://pypi.org/simple/pydensecrf/), version: 1.0rc2
2023-09-09T22:35:52,038   Found link https://files.pythonhosted.org/packages/31/5a/1c2ab48e8019d282c128bc5c621332267bb954d32eecdda3ba57306b1551/pydensecrf-1.0rc3.tar.gz (from https://pypi.org/simple/pydensecrf/), version: 1.0rc3
2023-09-09T22:35:52,039 Fetching project page and analyzing links: https://www.piwheels.org/simple/pydensecrf/
2023-09-09T22:35:52,039 Getting page https://www.piwheels.org/simple/pydensecrf/
2023-09-09T22:35:52,040 Found index url https://www.piwheels.org/simple/
2023-09-09T22:35:52,332 Fetched page https://www.piwheels.org/simple/pydensecrf/ as text/html
2023-09-09T22:35:52,337   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc1-cp34-cp34m-linux_armv6l.whl#sha256=243d9cd5d31c6c6b3f9be94fe3483f569f55cadc574b85a5f3850b0cc720a035 (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,338   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc1-cp34-cp34m-linux_armv7l.whl#sha256=243d9cd5d31c6c6b3f9be94fe3483f569f55cadc574b85a5f3850b0cc720a035 (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,338   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc1-cp35-cp35m-linux_armv6l.whl#sha256=ed50ded72e9ee0d18aa6c0a8b83d40251834554a543313f84e90041cdc18b9bd (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,339   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc1-cp35-cp35m-linux_armv7l.whl#sha256=ed50ded72e9ee0d18aa6c0a8b83d40251834554a543313f84e90041cdc18b9bd (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,339   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc2-cp34-cp34m-linux_armv6l.whl#sha256=72376de0d7e5c4f4d20e10701a5c6baff63266ad7b69da29dad270263fe92563 (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,340   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc2-cp34-cp34m-linux_armv7l.whl#sha256=72376de0d7e5c4f4d20e10701a5c6baff63266ad7b69da29dad270263fe92563 (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,341   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc2-cp35-cp35m-linux_armv6l.whl#sha256=9c5ac6c66ed3d66607fa12832a19ce4366c0826d3030e1cd84825d9eb80bedae (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,341   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc2-cp35-cp35m-linux_armv7l.whl#sha256=9c5ac6c66ed3d66607fa12832a19ce4366c0826d3030e1cd84825d9eb80bedae (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,342   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc3-cp34-cp34m-linux_armv6l.whl#sha256=10b3c73f1525f811209ecccc1f6c4c428bf493ddacc88091c8c2f97c5c1a52a4 (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,343   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc3-cp34-cp34m-linux_armv7l.whl#sha256=10b3c73f1525f811209ecccc1f6c4c428bf493ddacc88091c8c2f97c5c1a52a4 (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,343   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc3-cp35-cp35m-linux_armv6l.whl#sha256=097b990b0058792311dc92c8568d434685054fa51dd6c2b2b20a9f81c29e7b1d (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,344   Skipping link: No binaries permitted for pydensecrf: https://www.piwheels.org/simple/pydensecrf/pydensecrf-1.0rc3-cp35-cp35m-linux_armv7l.whl#sha256=097b990b0058792311dc92c8568d434685054fa51dd6c2b2b20a9f81c29e7b1d (from https://www.piwheels.org/simple/pydensecrf/)
2023-09-09T22:35:52,344 Skipping link: not a file: https://www.piwheels.org/simple/pydensecrf/
2023-09-09T22:35:52,344 Skipping link: not a file: https://pypi.org/simple/pydensecrf/
2023-09-09T22:35:52,363 Given no hashes to check 1 links for project 'pydensecrf': discarding no candidates
2023-09-09T22:35:52,381 Collecting pydensecrf==1.0rc1
2023-09-09T22:35:52,383   Created temporary directory: /tmp/pip-unpack-3svupkpw
2023-09-09T22:35:52,601   Downloading pydensecrf-1.0rc1.tar.gz (1.0 MB)
2023-09-09T22:35:53,533   Added pydensecrf==1.0rc1 from https://files.pythonhosted.org/packages/87/40/8bca500342914f83d35da61fd7be0c47955156bee87683a6aa1d0e8e040a/pydensecrf-1.0rc1.tar.gz to build tracker '/tmp/pip-build-tracker-_o6ljyv8'
2023-09-09T22:35:53,535   Running setup.py (path:/tmp/pip-wheel-p8kkbqtb/pydensecrf_a91618e723fe446f9e828bfe8808051e/setup.py) egg_info for package pydensecrf
2023-09-09T22:35:53,536   Created temporary directory: /tmp/pip-pip-egg-info-eweo2lwl
2023-09-09T22:35:53,537   Preparing metadata (setup.py): started
2023-09-09T22:35:53,538   Running command python setup.py egg_info
2023-09-09T22:35:55,728   /usr/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:384: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-p8kkbqtb/pydensecrf_a91618e723fe446f9e828bfe8808051e/pydensecrf/densecrf.pxd
2023-09-09T22:35:55,728     tree = Parsing.p_module(s, pxd, full_module_name)

2023-09-09T22:35:55,769   Error compiling Cython file:
2023-09-09T22:35:55,769   ------------------------------------------------------------
2023-09-09T22:35:55,770   ...
2023-09-09T22:35:55,771   from eigen cimport *
2023-09-09T22:35:55,771   ^
2023-09-09T22:35:55,772   ------------------------------------------------------------

2023-09-09T22:35:55,773   pydensecrf/densecrf.pxd:1:0: 'eigen.pxd' not found

2023-09-09T22:35:55,775   Error compiling Cython file:
2023-09-09T22:35:55,775   ------------------------------------------------------------
2023-09-09T22:35:55,776   ...

2023-09-09T22:35:55,777       cdef cppclass PottsCompatibility(LabelCompatibility):
2023-09-09T22:35:55,778           PottsCompatibility(float) except +

2023-09-09T22:35:55,779       cdef cppclass DiagonalCompatibility(LabelCompatibility):
2023-09-09T22:35:55,780           DiagonalCompatibility(const c_VectorXf&) except +
2023-09-09T22:35:55,781                                       ^
2023-09-09T22:35:55,781   ------------------------------------------------------------

2023-09-09T22:35:55,783   pydensecrf/densecrf.pxd:12:36: 'c_VectorXf' is not a type identifier

2023-09-09T22:35:55,784   Error compiling Cython file:
2023-09-09T22:35:55,784   ------------------------------------------------------------
2023-09-09T22:35:55,785   ...

2023-09-09T22:35:55,785       cdef cppclass DiagonalCompatibility(LabelCompatibility):
2023-09-09T22:35:55,786           DiagonalCompatibility(const c_VectorXf&) except +

2023-09-09T22:35:55,787       cdef cppclass MatrixCompatibility(LabelCompatibility):
2023-09-09T22:35:55,787           MatrixCompatibility(const c_MatrixXf&) except +
2023-09-09T22:35:55,788                                     ^
2023-09-09T22:35:55,788   ------------------------------------------------------------

2023-09-09T22:35:55,789   pydensecrf/densecrf.pxd:15:34: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,790   Error compiling Cython file:
2023-09-09T22:35:55,791   ------------------------------------------------------------
2023-09-09T22:35:55,791   ...
2023-09-09T22:35:55,792   cdef extern from "densecrf/include/unary.h":
2023-09-09T22:35:55,792       cdef cppclass UnaryEnergy:
2023-09-09T22:35:55,793           pass

2023-09-09T22:35:55,793       cdef cppclass ConstUnaryEnergy(UnaryEnergy):
2023-09-09T22:35:55,794           ConstUnaryEnergy(const c_MatrixXf& unary) except +
2023-09-09T22:35:55,794                                  ^
2023-09-09T22:35:55,795   ------------------------------------------------------------

2023-09-09T22:35:55,796   pydensecrf/densecrf.pxd:23:31: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,797   Error compiling Cython file:
2023-09-09T22:35:55,797   ------------------------------------------------------------
2023-09-09T22:35:55,798   ...

2023-09-09T22:35:55,799       cdef cppclass ConstUnaryEnergy(UnaryEnergy):
2023-09-09T22:35:55,799           ConstUnaryEnergy(const c_MatrixXf& unary) except +

2023-09-09T22:35:55,801       cdef cppclass LogisticUnaryEnergy(UnaryEnergy):
2023-09-09T22:35:55,801           LogisticUnaryEnergy(const c_MatrixXf& L, const c_MatrixXf& feature) except +
2023-09-09T22:35:55,802                                     ^
2023-09-09T22:35:55,802   ------------------------------------------------------------

2023-09-09T22:35:55,804   pydensecrf/densecrf.pxd:26:34: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,805   Error compiling Cython file:
2023-09-09T22:35:55,806   ------------------------------------------------------------
2023-09-09T22:35:55,806   ...

2023-09-09T22:35:55,808       cdef cppclass ConstUnaryEnergy(UnaryEnergy):
2023-09-09T22:35:55,808           ConstUnaryEnergy(const c_MatrixXf& unary) except +

2023-09-09T22:35:55,810       cdef cppclass LogisticUnaryEnergy(UnaryEnergy):
2023-09-09T22:35:55,810           LogisticUnaryEnergy(const c_MatrixXf& L, const c_MatrixXf& feature) except +
2023-09-09T22:35:55,811                                                          ^
2023-09-09T22:35:55,811   ------------------------------------------------------------

2023-09-09T22:35:55,813   pydensecrf/densecrf.pxd:26:55: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,815   Error compiling Cython file:
2023-09-09T22:35:55,815   ------------------------------------------------------------
2023-09-09T22:35:55,816   ...
2023-09-09T22:35:55,817           c_DenseCRF(int N, int M) except +

2023-09-09T22:35:55,818           # Setup methods.
2023-09-09T22:35:55,818           # TODO
2023-09-09T22:35:55,819           #void addPairwiseEnergy(PairwisePotential *potential)
2023-09-09T22:35:55,820           void addPairwiseEnergy(const c_MatrixXf &features, LabelCompatibility*, KernelType, NormalizationType)
2023-09-09T22:35:55,820                                        ^
2023-09-09T22:35:55,821   ------------------------------------------------------------

2023-09-09T22:35:55,822   pydensecrf/densecrf.pxd:54:37: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,824   Error compiling Cython file:
2023-09-09T22:35:55,824   ------------------------------------------------------------
2023-09-09T22:35:55,825   ...
2023-09-09T22:35:55,826           # Setup methods.
2023-09-09T22:35:55,826           # TODO
2023-09-09T22:35:55,827           #void addPairwiseEnergy(PairwisePotential *potential)
2023-09-09T22:35:55,827           void addPairwiseEnergy(const c_MatrixXf &features, LabelCompatibility*, KernelType, NormalizationType)
2023-09-09T22:35:55,828           void setUnaryEnergy(UnaryEnergy *unary)
2023-09-09T22:35:55,828           void setUnaryEnergy(const c_MatrixXf &unary)
2023-09-09T22:35:55,829                                     ^
2023-09-09T22:35:55,829   ------------------------------------------------------------

2023-09-09T22:35:55,830   pydensecrf/densecrf.pxd:56:34: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,831   Error compiling Cython file:
2023-09-09T22:35:55,831   ------------------------------------------------------------
2023-09-09T22:35:55,832   ...
2023-09-09T22:35:55,832           # TODO
2023-09-09T22:35:55,832           #void addPairwiseEnergy(PairwisePotential *potential)
2023-09-09T22:35:55,833           void addPairwiseEnergy(const c_MatrixXf &features, LabelCompatibility*, KernelType, NormalizationType)
2023-09-09T22:35:55,833           void setUnaryEnergy(UnaryEnergy *unary)
2023-09-09T22:35:55,834           void setUnaryEnergy(const c_MatrixXf &unary)
2023-09-09T22:35:55,834           void setUnaryEnergy(const c_MatrixXf &L, const c_MatrixXf &feature)
2023-09-09T22:35:55,835                                     ^
2023-09-09T22:35:55,835   ------------------------------------------------------------

2023-09-09T22:35:55,836   pydensecrf/densecrf.pxd:57:34: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,837   Error compiling Cython file:
2023-09-09T22:35:55,837   ------------------------------------------------------------
2023-09-09T22:35:55,838   ...
2023-09-09T22:35:55,838           # TODO
2023-09-09T22:35:55,839           #void addPairwiseEnergy(PairwisePotential *potential)
2023-09-09T22:35:55,840           void addPairwiseEnergy(const c_MatrixXf &features, LabelCompatibility*, KernelType, NormalizationType)
2023-09-09T22:35:55,840           void setUnaryEnergy(UnaryEnergy *unary)
2023-09-09T22:35:55,841           void setUnaryEnergy(const c_MatrixXf &unary)
2023-09-09T22:35:55,842           void setUnaryEnergy(const c_MatrixXf &L, const c_MatrixXf &feature)
2023-09-09T22:35:55,842                                                          ^
2023-09-09T22:35:55,843   ------------------------------------------------------------

2023-09-09T22:35:55,844   pydensecrf/densecrf.pxd:57:55: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,845   Error compiling Cython file:
2023-09-09T22:35:55,846   ------------------------------------------------------------
2023-09-09T22:35:55,847   ...
2023-09-09T22:35:55,847           void setUnaryEnergy(UnaryEnergy *unary)
2023-09-09T22:35:55,848           void setUnaryEnergy(const c_MatrixXf &unary)
2023-09-09T22:35:55,848           void setUnaryEnergy(const c_MatrixXf &L, const c_MatrixXf &feature)

2023-09-09T22:35:55,849           # Inference methods.
2023-09-09T22:35:55,850           c_MatrixXf inference(int n_iterations)
2023-09-09T22:35:55,850           ^
2023-09-09T22:35:55,851   ------------------------------------------------------------

2023-09-09T22:35:55,852   pydensecrf/densecrf.pxd:60:8: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,853   Error compiling Cython file:
2023-09-09T22:35:55,853   ------------------------------------------------------------
2023-09-09T22:35:55,854   ...
2023-09-09T22:35:55,855           c_MatrixXf inference(int n_iterations)
2023-09-09T22:35:55,855           # TODO: Not enabled because it would require wrapping VectorXs (note the `s`)
2023-09-09T22:35:55,856           #c_VectorXs map(int n_iterations)

2023-09-09T22:35:55,857           # Step-by-step inference methods.
2023-09-09T22:35:55,858           c_MatrixXf startInference() const
2023-09-09T22:35:55,858           ^
2023-09-09T22:35:55,859   ------------------------------------------------------------

2023-09-09T22:35:55,860   pydensecrf/densecrf.pxd:65:8: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,861   Error compiling Cython file:
2023-09-09T22:35:55,861   ------------------------------------------------------------
2023-09-09T22:35:55,862   ...
2023-09-09T22:35:55,862           # TODO: Not enabled because it would require wrapping VectorXs (note the `s`)
2023-09-09T22:35:55,863           #c_VectorXs map(int n_iterations)

2023-09-09T22:35:55,864           # Step-by-step inference methods.
2023-09-09T22:35:55,864           c_MatrixXf startInference() const
2023-09-09T22:35:55,864           void stepInference(c_MatrixXf &Q, c_MatrixXf &tmp1, c_MatrixXf &tmp2) const
2023-09-09T22:35:55,865                              ^
2023-09-09T22:35:55,865   ------------------------------------------------------------

2023-09-09T22:35:55,866   pydensecrf/densecrf.pxd:66:27: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,867   Error compiling Cython file:
2023-09-09T22:35:55,867   ------------------------------------------------------------
2023-09-09T22:35:55,868   ...
2023-09-09T22:35:55,868           # TODO: Not enabled because it would require wrapping VectorXs (note the `s`)
2023-09-09T22:35:55,869           #c_VectorXs map(int n_iterations)

2023-09-09T22:35:55,869           # Step-by-step inference methods.
2023-09-09T22:35:55,870           c_MatrixXf startInference() const
2023-09-09T22:35:55,870           void stepInference(c_MatrixXf &Q, c_MatrixXf &tmp1, c_MatrixXf &tmp2) const
2023-09-09T22:35:55,871                                             ^
2023-09-09T22:35:55,871   ------------------------------------------------------------

2023-09-09T22:35:55,872   pydensecrf/densecrf.pxd:66:42: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,873   Error compiling Cython file:
2023-09-09T22:35:55,874   ------------------------------------------------------------
2023-09-09T22:35:55,874   ...
2023-09-09T22:35:55,875           # TODO: Not enabled because it would require wrapping VectorXs (note the `s`)
2023-09-09T22:35:55,875           #c_VectorXs map(int n_iterations)

2023-09-09T22:35:55,877           # Step-by-step inference methods.
2023-09-09T22:35:55,877           c_MatrixXf startInference() const
2023-09-09T22:35:55,878           void stepInference(c_MatrixXf &Q, c_MatrixXf &tmp1, c_MatrixXf &tmp2) const
2023-09-09T22:35:55,879                                                               ^
2023-09-09T22:35:55,879   ------------------------------------------------------------

2023-09-09T22:35:55,880   pydensecrf/densecrf.pxd:66:60: 'c_MatrixXf' is not a type identifier

2023-09-09T22:35:55,881   Error compiling Cython file:
2023-09-09T22:35:55,882   ------------------------------------------------------------
2023-09-09T22:35:55,883   ...
2023-09-09T22:35:55,883           # Step-by-step inference methods.
2023-09-09T22:35:55,884           c_MatrixXf startInference() const
2023-09-09T22:35:55,884           void stepInference(c_MatrixXf &Q, c_MatrixXf &tmp1, c_MatrixXf &tmp2) const
2023-09-09T22:35:55,885           #double gradient( int n_iterations, const ObjectiveFunction & objective, c_VectorXf * unary_grad, c_VectorXf * lbl_cmp_grad, c_VectorXf * kernel_grad=NULL ) const;

2023-09-09T22:35:55,886           double klDivergence(const c_MatrixXf &Q) const
2023-09-09T22:35:55,887                                     ^
2023-09-09T22:35:55,887   ------------------------------------------------------------

2023-09-09T22:35:55,889   pydensecrf/densecrf.pxd:69:34: 'c_MatrixXf' is not a type identifier
2023-09-09T22:35:55,889   warning: pydensecrf/densecrf.pyx:20:4: Unreachable code

2023-09-09T22:35:56,727   Error compiling Cython file:
2023-09-09T22:35:56,728   ------------------------------------------------------------
2023-09-09T22:35:56,729   ...
2023-09-09T22:35:56,729           return eigen.MatrixXf().wrap(self._this.inference(niter))

2023-09-09T22:35:56,731       def startInference(self):
2023-09-09T22:35:56,732           return eigen.MatrixXf().wrap(self._this.startInference()), eigen.MatrixXf(), eigen.MatrixXf()

2023-09-09T22:35:56,733       def stepInference(self, MatrixXf Q, MatrixXf tmp1, MatrixXf tmp2):
2023-09-09T22:35:56,733                               ^
2023-09-09T22:35:56,734   ------------------------------------------------------------

2023-09-09T22:35:56,735   pydensecrf/densecrf.pyx:97:28: 'MatrixXf' is not a type identifier

2023-09-09T22:35:56,736   Error compiling Cython file:
2023-09-09T22:35:56,736   ------------------------------------------------------------
2023-09-09T22:35:56,737   ...
2023-09-09T22:35:56,737           return eigen.MatrixXf().wrap(self._this.inference(niter))

2023-09-09T22:35:56,738       def startInference(self):
2023-09-09T22:35:56,739           return eigen.MatrixXf().wrap(self._this.startInference()), eigen.MatrixXf(), eigen.MatrixXf()

2023-09-09T22:35:56,740       def stepInference(self, MatrixXf Q, MatrixXf tmp1, MatrixXf tmp2):
2023-09-09T22:35:56,740                                           ^
2023-09-09T22:35:56,741   ------------------------------------------------------------

2023-09-09T22:35:56,742   pydensecrf/densecrf.pyx:97:40: 'MatrixXf' is not a type identifier

2023-09-09T22:35:56,743   Error compiling Cython file:
2023-09-09T22:35:56,743   ------------------------------------------------------------
2023-09-09T22:35:56,744   ...
2023-09-09T22:35:56,744           return eigen.MatrixXf().wrap(self._this.inference(niter))

2023-09-09T22:35:56,745       def startInference(self):
2023-09-09T22:35:56,746           return eigen.MatrixXf().wrap(self._this.startInference()), eigen.MatrixXf(), eigen.MatrixXf()

2023-09-09T22:35:56,747       def stepInference(self, MatrixXf Q, MatrixXf tmp1, MatrixXf tmp2):
2023-09-09T22:35:56,748                                                          ^
2023-09-09T22:35:56,748   ------------------------------------------------------------

2023-09-09T22:35:56,749   pydensecrf/densecrf.pyx:97:55: 'MatrixXf' is not a type identifier

2023-09-09T22:35:56,751   Error compiling Cython file:
2023-09-09T22:35:56,751   ------------------------------------------------------------
2023-09-09T22:35:56,752   ...
2023-09-09T22:35:56,753           return eigen.MatrixXf().wrap(self._this.startInference()), eigen.MatrixXf(), eigen.MatrixXf()

2023-09-09T22:35:56,754       def stepInference(self, MatrixXf Q, MatrixXf tmp1, MatrixXf tmp2):
2023-09-09T22:35:56,754           self._this.stepInference(Q.m, tmp1.m, tmp2.m)

2023-09-09T22:35:56,756       def klDivergence(self, MatrixXf Q):
2023-09-09T22:35:56,756                              ^
2023-09-09T22:35:56,757   ------------------------------------------------------------

2023-09-09T22:35:56,759   pydensecrf/densecrf.pyx:100:27: 'MatrixXf' is not a type identifier

2023-09-09T22:35:56,864   Error compiling Cython file:
2023-09-09T22:35:56,864   ------------------------------------------------------------
2023-09-09T22:35:56,865   ...
2023-09-09T22:35:56,865               raise ValueError("Bad shape for pairwise energy (Need (?, {}), got {})".format(self._nvar, (features.shape[0], features.shape[1])))

2023-09-09T22:35:56,867           self._this.addPairwiseEnergy(eigen.c_matrixXf(features), _labelcomp(compat), kernel, normalization)

2023-09-09T22:35:56,868       def setUnary(self, Unary u):
2023-09-09T22:35:56,868           self._this.setUnaryEnergy(u.move())
2023-09-09T22:35:56,869                                    ^
2023-09-09T22:35:56,869   ------------------------------------------------------------

2023-09-09T22:35:56,871   pydensecrf/densecrf.pyx:78:33: ambiguous overloaded method
2023-09-09T22:35:59,012   Traceback (most recent call last):
2023-09-09T22:35:59,013     File "<string>", line 2, in <module>
2023-09-09T22:35:59,014     File "<pip-setuptools-caller>", line 34, in <module>
2023-09-09T22:35:59,014     File "/tmp/pip-wheel-p8kkbqtb/pydensecrf_a91618e723fe446f9e828bfe8808051e/setup.py", line 13, in <module>
2023-09-09T22:35:59,015       ext_modules = cythonize(['pydensecrf/eigen.pyx', 'pydensecrf/densecrf.pyx'])
2023-09-09T22:35:59,016                     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,017     File "/usr/local/lib/python3.11/dist-packages/Cython/Build/Dependencies.py", line 1134, in cythonize
2023-09-09T22:35:59,018       cythonize_one(*args)
2023-09-09T22:35:59,019     File "/usr/local/lib/python3.11/dist-packages/Cython/Build/Dependencies.py", line 1301, in cythonize_one
2023-09-09T22:35:59,020       raise CompileError(None, pyx_file)
2023-09-09T22:35:59,020   Cython.Compiler.Errors.CompileError: pydensecrf/densecrf.pyx
2023-09-09T22:35:59,021   Compiling pydensecrf/eigen.pyx because it changed.
2023-09-09T22:35:59,022   Compiling pydensecrf/densecrf.pyx because it changed.
2023-09-09T22:35:59,022   [1/2] Cythonizing pydensecrf/densecrf.pyx
2023-09-09T22:35:59,368   ERROR: [present-rich] python setup.py egg_info exited with 1
2023-09-09T22:35:59,381   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-09-09T22:35:59,381   exec(compile('"'"''"'"''"'"'
2023-09-09T22:35:59,381   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-09-09T22:35:59,381   #
2023-09-09T22:35:59,381   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-09-09T22:35:59,381   #   import from `distutils.core` to work with newer packaging standards.
2023-09-09T22:35:59,381   # - It provides a clear error message when setuptools is not installed.
2023-09-09T22:35:59,381   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-09-09T22:35:59,381   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-09-09T22:35:59,381   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-09-09T22:35:59,381   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-09-09T22:35:59,381   import os, sys, tokenize
2023-09-09T22:35:59,381   
2023-09-09T22:35:59,381   try:
2023-09-09T22:35:59,381       import setuptools
2023-09-09T22:35:59,381   except ImportError as error:
2023-09-09T22:35:59,381       print(
2023-09-09T22:35:59,381           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-09-09T22:35:59,381           "the build environment.",
2023-09-09T22:35:59,381           file=sys.stderr,
2023-09-09T22:35:59,381       )
2023-09-09T22:35:59,381       sys.exit(1)
2023-09-09T22:35:59,381   
2023-09-09T22:35:59,381   __file__ = %r
2023-09-09T22:35:59,381   sys.argv[0] = __file__
2023-09-09T22:35:59,381   
2023-09-09T22:35:59,381   if os.path.exists(__file__):
2023-09-09T22:35:59,381       filename = __file__
2023-09-09T22:35:59,381       with tokenize.open(__file__) as f:
2023-09-09T22:35:59,381           setup_py_code = f.read()
2023-09-09T22:35:59,381   else:
2023-09-09T22:35:59,381       filename = "<auto-generated setuptools caller>"
2023-09-09T22:35:59,381       setup_py_code = "from setuptools import setup; setup()"
2023-09-09T22:35:59,381   
2023-09-09T22:35:59,381   exec(compile(setup_py_code, filename, "exec"))
2023-09-09T22:35:59,381   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-p8kkbqtb/pydensecrf_a91618e723fe446f9e828bfe8808051e/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-eweo2lwl[/]
2023-09-09T22:35:59,381   [bold magenta]cwd[/]: /tmp/pip-wheel-p8kkbqtb/pydensecrf_a91618e723fe446f9e828bfe8808051e/
2023-09-09T22:35:59,382   Preparing metadata (setup.py): finished with status 'error'
2023-09-09T22:35:59,383 ERROR: [present-rich] metadata generation failed
2023-09-09T22:35:59,389 Exception information:
2023-09-09T22:35:59,389 Traceback (most recent call last):
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-09-09T22:35:59,389     call_subprocess(
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-09-09T22:35:59,389     raise error
2023-09-09T22:35:59,389 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-09-09T22:35:59,389 
2023-09-09T22:35:59,389 The above exception was the direct cause of the following exception:
2023-09-09T22:35:59,389 
2023-09-09T22:35:59,389 Traceback (most recent call last):
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-09-09T22:35:59,389     status = run_func(*args)
2023-09-09T22:35:59,389              ^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper
2023-09-09T22:35:59,389     return func(self, options, args)
2023-09-09T22:35:59,389            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-09-09T22:35:59,389     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-09-09T22:35:59,389                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/resolver.py", line 92, in resolve
2023-09-09T22:35:59,389     result = self._result = resolver.resolve(
2023-09-09T22:35:59,389                             ^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-09-09T22:35:59,389     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-09-09T22:35:59,389             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-09-09T22:35:59,389     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-09-09T22:35:59,389     if not criterion.candidates:
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-09-09T22:35:59,389     return bool(self._sequence)
2023-09-09T22:35:59,389            ^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-09-09T22:35:59,389     return any(self)
2023-09-09T22:35:59,389            ^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-09-09T22:35:59,389     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-09-09T22:35:59,389            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-09-09T22:35:59,389     candidate = func()
2023-09-09T22:35:59,389                 ^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/factory.py", line 206, in _make_candidate_from_link
2023-09-09T22:35:59,389     self._link_candidate_cache[link] = LinkCandidate(
2023-09-09T22:35:59,389                                        ^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-09-09T22:35:59,389     super().__init__(
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-09-09T22:35:59,389     self.dist = self._prepare()
2023-09-09T22:35:59,389                 ^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-09-09T22:35:59,389     dist = self._prepare_distribution()
2023-09-09T22:35:59,389            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-09-09T22:35:59,389     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-09-09T22:35:59,389            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 538, in prepare_linked_requirement
2023-09-09T22:35:59,389     return self._prepare_linked_requirement(req, parallel_builds)
2023-09-09T22:35:59,389            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 653, in _prepare_linked_requirement
2023-09-09T22:35:59,389     dist = _get_prepared_distribution(
2023-09-09T22:35:59,389            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/prepare.py", line 69, in _get_prepared_distribution
2023-09-09T22:35:59,389     abstract_dist.prepare_distribution_metadata(
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/distributions/sdist.py", line 61, in prepare_distribution_metadata
2023-09-09T22:35:59,389     self.req.prepare_metadata()
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/req/req_install.py", line 568, in prepare_metadata
2023-09-09T22:35:59,389     self.metadata_directory = generate_metadata_legacy(
2023-09-09T22:35:59,389                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-09-09T22:35:59,389   File "/usr/local/lib/python3.11/dist-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-09-09T22:35:59,389     raise MetadataGenerationFailed(package_details=details) from error
2023-09-09T22:35:59,389 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-09-09T22:35:59,401 Removed pydensecrf==1.0rc1 from https://files.pythonhosted.org/packages/87/40/8bca500342914f83d35da61fd7be0c47955156bee87683a6aa1d0e8e040a/pydensecrf-1.0rc1.tar.gz from build tracker '/tmp/pip-build-tracker-_o6ljyv8'
2023-09-09T22:35:59,402 Removed build tracker: '/tmp/pip-build-tracker-_o6ljyv8'