2023-09-10T18:45:06,931 Created temporary directory: /tmp/pip-build-tracker-wct8kse9 2023-09-10T18:45:06,933 Initialized build tracking at /tmp/pip-build-tracker-wct8kse9 2023-09-10T18:45:06,933 Created build tracker: /tmp/pip-build-tracker-wct8kse9 2023-09-10T18:45:06,934 Entered build tracker: /tmp/pip-build-tracker-wct8kse9 2023-09-10T18:45:06,935 Created temporary directory: /tmp/pip-wheel-901v7vg3 2023-09-10T18:45:06,938 Created temporary directory: /tmp/pip-ephem-wheel-cache-jva9bp85 2023-09-10T18:45:06,960 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-10T18:45:06,964 2 location(s) to search for versions of gff3tool: 2023-09-10T18:45:06,964 * https://pypi.org/simple/gff3tool/ 2023-09-10T18:45:06,964 * https://www.piwheels.org/simple/gff3tool/ 2023-09-10T18:45:06,965 Fetching project page and analyzing links: https://pypi.org/simple/gff3tool/ 2023-09-10T18:45:06,966 Getting page https://pypi.org/simple/gff3tool/ 2023-09-10T18:45:06,968 Found index url https://pypi.org/simple/ 2023-09-10T18:45:07,108 Fetched page https://pypi.org/simple/gff3tool/ as application/vnd.pypi.simple.v1+json 2023-09-10T18:45:07,111 Found link https://files.pythonhosted.org/packages/71/33/dac2be6f38dd40d4f914814e7afe2cc5391f1bfecc77439612284de537a1/gff3tool-1.1.0.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.1.0 2023-09-10T18:45:07,112 Found link https://files.pythonhosted.org/packages/a1/f1/6630128adac220623c28a5f5ed4e6cfa070589143a0b2151237c20923149/gff3tool-1.3.0.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.3.0 2023-09-10T18:45:07,113 Found link https://files.pythonhosted.org/packages/71/cb/9b9d73fd7171571b9ad063fa3a6aac684aeebc7e958a37e2423c690d5110/gff3tool-1.4.1.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.1 2023-09-10T18:45:07,114 Found link https://files.pythonhosted.org/packages/23/bb/0b7952dfc7fb8992e6d7349eb55cbbe51e6c0750d57e33c01de5be39da46/gff3tool-1.4.2.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.2 2023-09-10T18:45:07,114 Found link https://files.pythonhosted.org/packages/7c/79/b59b3e47735edfe2ac2a9334c8e2836d63c0899b51f9badc416ae07e8353/gff3tool-1.4.3.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.3 2023-09-10T18:45:07,115 Found link https://files.pythonhosted.org/packages/cf/33/8cd85764a601bf3a5e0116f8b457c308294ec9c25139aacade6e21860335/gff3tool-1.4.4.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.4 2023-09-10T18:45:07,116 Skipping link: No binaries permitted for gff3tool: https://files.pythonhosted.org/packages/2a/4c/a16d0aae5fa870fc7630eb0536042fd3e0494467efd9f27cea6090cdbbe0/gff3tool-1.4.5-cp27-cp27m-win_amd64.whl (from https://pypi.org/simple/gff3tool/) 2023-09-10T18:45:07,117 Found link https://files.pythonhosted.org/packages/f8/78/330f714b6e771d69079128a44f61830c9ce22969eaa3b176dafb94c48809/gff3tool-1.4.5.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.5 2023-09-10T18:45:07,118 Found link https://files.pythonhosted.org/packages/8a/82/0f528dc498d7fdfbd6b8a968ed1cfee43ffa55461e77830a22f606aea3bb/gff3tool-2.0.0.tar.gz (from https://pypi.org/simple/gff3tool/), version: 2.0.0 2023-09-10T18:45:07,119 Found link https://files.pythonhosted.org/packages/aa/b3/cecb768a048bf2e661f0e77bf3208ed8ef203acbd93107b1f00d7b57da1e/gff3tool-2.0.1.tar.gz (from https://pypi.org/simple/gff3tool/), version: 2.0.1 2023-09-10T18:45:07,121 Found link https://files.pythonhosted.org/packages/21/2e/7e77d34adec82b4d896c8959c7993534810f8bc43cc374e984e5635bbf94/gff3tool-2.0.3.tar.gz (from https://pypi.org/simple/gff3tool/), version: 2.0.3 2023-09-10T18:45:07,122 Found link https://files.pythonhosted.org/packages/7f/12/d177f42f6e3a73dae82fd5cc89e7404de121ab381e5454ca8da11110d88a/gff3tool-2.1.0.tar.gz (from https://pypi.org/simple/gff3tool/), version: 2.1.0 2023-09-10T18:45:07,122 Fetching project page and analyzing links: https://www.piwheels.org/simple/gff3tool/ 2023-09-10T18:45:07,123 Getting page https://www.piwheels.org/simple/gff3tool/ 2023-09-10T18:45:07,125 Found index url https://www.piwheels.org/simple/ 2023-09-10T18:45:07,518 Fetched page https://www.piwheels.org/simple/gff3tool/ as text/html 2023-09-10T18:45:07,572 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-1.1.0-py3-none-any.whl#sha256=f5eefabf7e1b27382cef033e939fd956121ebf02ae4e7085b83ade5f98c69d90 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,573 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-1.3.0-py3-none-any.whl#sha256=f993f46b60c812a88426ea96ad2c23aa521aee04c8bdad4016e21d03d6186291 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,574 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp34-cp34m-linux_armv6l.whl#sha256=a6197f7982794de21eb411313c8591f643ea19667efba72907a0fbafd47ca4e7 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,575 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp34-cp34m-linux_armv7l.whl#sha256=a6197f7982794de21eb411313c8591f643ea19667efba72907a0fbafd47ca4e7 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,576 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp35-cp35m-linux_armv6l.whl#sha256=a6d1a1bf91d08ad305f7476e9a3439e57749b4091c112cbf4f73569a4f711a68 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,577 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp35-cp35m-linux_armv7l.whl#sha256=a6d1a1bf91d08ad305f7476e9a3439e57749b4091c112cbf4f73569a4f711a68 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,578 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp37-cp37m-linux_armv6l.whl#sha256=0be9d0d0079481fcbd19198c4fba52c6703b11b043e14bc17cd9b7863857efde (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,580 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp37-cp37m-linux_armv7l.whl#sha256=0be9d0d0079481fcbd19198c4fba52c6703b11b043e14bc17cd9b7863857efde (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,667 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp39-cp39-linux_armv6l.whl#sha256=7dbbba3501c691ddb06f2ace77ee9897d1e51e32f6e05430923d4a5e53b86174 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,672 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp39-cp39-linux_armv7l.whl#sha256=7dbbba3501c691ddb06f2ace77ee9897d1e51e32f6e05430923d4a5e53b86174 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,673 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp34-cp34m-linux_armv6l.whl#sha256=fa519097d18d8d8239808e305f0bb0549b3dd93a72ed8d5ea6f45d785e6bef11 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,683 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp34-cp34m-linux_armv7l.whl#sha256=fa519097d18d8d8239808e305f0bb0549b3dd93a72ed8d5ea6f45d785e6bef11 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,684 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp35-cp35m-linux_armv6l.whl#sha256=baa47b3147a931daf4958a447f96979e4448707996cc9d60ac45ad3ebb8e9c1f (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,688 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp35-cp35m-linux_armv7l.whl#sha256=baa47b3147a931daf4958a447f96979e4448707996cc9d60ac45ad3ebb8e9c1f (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,689 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp37-cp37m-linux_armv6l.whl#sha256=88be7d8c71c322212fdc989a672f6e0f10ed299cb5615d7d34f70058a0d6f928 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,690 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp37-cp37m-linux_armv7l.whl#sha256=88be7d8c71c322212fdc989a672f6e0f10ed299cb5615d7d34f70058a0d6f928 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,700 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=a89f1ece9e20b3183b0eba298b269f1c4b0109af60b409f5d3f7bc0be4914bfd (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,701 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp39-cp39-linux_armv7l.whl#sha256=a89f1ece9e20b3183b0eba298b269f1c4b0109af60b409f5d3f7bc0be4914bfd (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,702 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp35-cp35m-linux_armv6l.whl#sha256=ce80154080e74e3fb30b340e7a76661a4b8f3d78c6104490aa6da9c40fdc91d6 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,711 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp35-cp35m-linux_armv7l.whl#sha256=ce80154080e74e3fb30b340e7a76661a4b8f3d78c6104490aa6da9c40fdc91d6 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,712 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp37-cp37m-linux_armv6l.whl#sha256=79c3e33604c37bc449a60874dbc1520dde9140874fb47948d3a087eeec48f52f (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,713 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp37-cp37m-linux_armv7l.whl#sha256=79c3e33604c37bc449a60874dbc1520dde9140874fb47948d3a087eeec48f52f (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,714 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp39-cp39-linux_armv6l.whl#sha256=66d9164d8245e216f080754a89df8cda4192f034e99a32532198ccf3c38f6faa (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,746 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp39-cp39-linux_armv7l.whl#sha256=66d9164d8245e216f080754a89df8cda4192f034e99a32532198ccf3c38f6faa (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,760 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp35-cp35m-linux_armv6l.whl#sha256=5eef1c37d908cd2d30f368726348cf85a26dc4d95abc8131735de5c720d7975b (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,762 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp35-cp35m-linux_armv7l.whl#sha256=5eef1c37d908cd2d30f368726348cf85a26dc4d95abc8131735de5c720d7975b (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,884 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp37-cp37m-linux_armv6l.whl#sha256=cfe6edebe5cd63bcd5cd38e34377d8c34eb8fdc675d148da65e75d4399db5ff6 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,885 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp37-cp37m-linux_armv7l.whl#sha256=cfe6edebe5cd63bcd5cd38e34377d8c34eb8fdc675d148da65e75d4399db5ff6 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,886 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp39-cp39-linux_armv6l.whl#sha256=acb5d3cb45afefe5eab3c74db7b776dda5cf59ce38bb15cbde8edddd6079c343 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:07,975 Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp39-cp39-linux_armv7l.whl#sha256=acb5d3cb45afefe5eab3c74db7b776dda5cf59ce38bb15cbde8edddd6079c343 (from https://www.piwheels.org/simple/gff3tool/) 2023-09-10T18:45:08,023 Skipping link: not a file: https://www.piwheels.org/simple/gff3tool/ 2023-09-10T18:45:08,025 Skipping link: not a file: https://pypi.org/simple/gff3tool/ 2023-09-10T18:45:08,844 Given no hashes to check 1 links for project 'gff3tool': discarding no candidates 2023-09-10T18:45:10,628 Collecting gff3tool==1.4.2 2023-09-10T18:45:11,020 Created temporary directory: /tmp/pip-unpack-d98qp7k7 2023-09-10T18:45:11,574 Downloading gff3tool-1.4.2.tar.gz (81 kB) 2023-09-10T18:45:14,931 Added gff3tool==1.4.2 from https://files.pythonhosted.org/packages/23/bb/0b7952dfc7fb8992e6d7349eb55cbbe51e6c0750d57e33c01de5be39da46/gff3tool-1.4.2.tar.gz to build tracker '/tmp/pip-build-tracker-wct8kse9' 2023-09-10T18:45:14,933 Running setup.py (path:/tmp/pip-wheel-901v7vg3/gff3tool_2915bd05ac7748a68af28b6559c6991a/setup.py) egg_info for package gff3tool 2023-09-10T18:45:14,934 Created temporary directory: /tmp/pip-pip-egg-info-fdy1oqyw 2023-09-10T18:45:14,935 Preparing metadata (setup.py): started 2023-09-10T18:45:14,936 Running command python setup.py egg_info 2023-09-10T18:45:16,257 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-10T18:45:16,257 !! 2023-09-10T18:45:16,262 ******************************************************************************** 2023-09-10T18:45:16,262 Usage of dash-separated 'dist-dir' will not be supported in future 2023-09-10T18:45:16,263 versions. Please use the underscore name 'dist_dir' instead. 2023-09-10T18:45:16,265 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-10T18:45:16,266 or your builds will no longer be supported. 2023-09-10T18:45:16,268 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-10T18:45:16,269 ******************************************************************************** 2023-09-10T18:45:16,272 !! 2023-09-10T18:45:16,273 opt = self.warn_dash_deprecation(opt, section) 2023-09-10T18:45:16,650 running egg_info 2023-09-10T18:45:16,652 creating /tmp/pip-pip-egg-info-fdy1oqyw/gff3tool.egg-info 2023-09-10T18:45:16,680 writing /tmp/pip-pip-egg-info-fdy1oqyw/gff3tool.egg-info/PKG-INFO 2023-09-10T18:45:16,685 writing dependency_links to /tmp/pip-pip-egg-info-fdy1oqyw/gff3tool.egg-info/dependency_links.txt 2023-09-10T18:45:16,687 writing entry points to /tmp/pip-pip-egg-info-fdy1oqyw/gff3tool.egg-info/entry_points.txt 2023-09-10T18:45:16,690 writing top-level names to /tmp/pip-pip-egg-info-fdy1oqyw/gff3tool.egg-info/top_level.txt 2023-09-10T18:45:16,692 writing manifest file '/tmp/pip-pip-egg-info-fdy1oqyw/gff3tool.egg-info/SOURCES.txt' 2023-09-10T18:45:16,765 reading manifest file '/tmp/pip-pip-egg-info-fdy1oqyw/gff3tool.egg-info/SOURCES.txt' 2023-09-10T18:45:16,771 reading manifest template 'MANIFEST.in' 2023-09-10T18:45:16,781 writing manifest file '/tmp/pip-pip-egg-info-fdy1oqyw/gff3tool.egg-info/SOURCES.txt' 2023-09-10T18:45:16,890 Preparing metadata (setup.py): finished with status 'done' 2023-09-10T18:45:16,895 Source in /tmp/pip-wheel-901v7vg3/gff3tool_2915bd05ac7748a68af28b6559c6991a has version 1.4.2, which satisfies requirement gff3tool==1.4.2 from https://files.pythonhosted.org/packages/23/bb/0b7952dfc7fb8992e6d7349eb55cbbe51e6c0750d57e33c01de5be39da46/gff3tool-1.4.2.tar.gz 2023-09-10T18:45:16,896 Removed gff3tool==1.4.2 from https://files.pythonhosted.org/packages/23/bb/0b7952dfc7fb8992e6d7349eb55cbbe51e6c0750d57e33c01de5be39da46/gff3tool-1.4.2.tar.gz from build tracker '/tmp/pip-build-tracker-wct8kse9' 2023-09-10T18:45:16,901 Created temporary directory: /tmp/pip-unpack-47bzl6fg 2023-09-10T18:45:16,907 Created temporary directory: /tmp/pip-unpack-x3zv1b6i 2023-09-10T18:45:16,912 Building wheels for collected packages: gff3tool 2023-09-10T18:45:16,918 Created temporary directory: /tmp/pip-wheel-dj_uec_a 2023-09-10T18:45:16,919 Building wheel for gff3tool (setup.py): started 2023-09-10T18:45:16,920 Destination directory: /tmp/pip-wheel-dj_uec_a 2023-09-10T18:45:16,921 Running command python setup.py bdist_wheel 2023-09-10T18:45:17,699 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-10T18:45:17,699 !! 2023-09-10T18:45:17,701 ******************************************************************************** 2023-09-10T18:45:17,701 Usage of dash-separated 'dist-dir' will not be supported in future 2023-09-10T18:45:17,702 versions. Please use the underscore name 'dist_dir' instead. 2023-09-10T18:45:17,703 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-10T18:45:17,704 or your builds will no longer be supported. 2023-09-10T18:45:17,705 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-10T18:45:17,705 ******************************************************************************** 2023-09-10T18:45:17,707 !! 2023-09-10T18:45:17,707 opt = self.warn_dash_deprecation(opt, section) 2023-09-10T18:45:17,987 running bdist_wheel 2023-09-10T18:45:18,066 running build 2023-09-10T18:45:18,067 Traceback (most recent call last): 2023-09-10T18:45:18,068 File "", line 2, in 2023-09-10T18:45:18,068 File "", line 34, in 2023-09-10T18:45:18,069 File "/tmp/pip-wheel-901v7vg3/gff3tool_2915bd05ac7748a68af28b6559c6991a/setup.py", line 67, in 2023-09-10T18:45:18,069 setup( 2023-09-10T18:45:18,070 File "/usr/local/lib/python3.11/dist-packages/setuptools/__init__.py", line 103, in setup 2023-09-10T18:45:18,071 return distutils.core.setup(**attrs) 2023-09-10T18:45:18,071 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-10T18:45:18,072 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 185, in setup 2023-09-10T18:45:18,073 return run_commands(dist) 2023-09-10T18:45:18,073 ^^^^^^^^^^^^^^^^^^ 2023-09-10T18:45:18,074 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 201, in run_commands 2023-09-10T18:45:18,075 dist.run_commands() 2023-09-10T18:45:18,076 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 969, in run_commands 2023-09-10T18:45:18,076 self.run_command(cmd) 2023-09-10T18:45:18,077 File "/usr/local/lib/python3.11/dist-packages/setuptools/dist.py", line 1001, in run_command 2023-09-10T18:45:18,078 super().run_command(command) 2023-09-10T18:45:18,078 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-10T18:45:18,079 cmd_obj.run() 2023-09-10T18:45:18,079 File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 325, in run 2023-09-10T18:45:18,080 self.run_command("build") 2023-09-10T18:45:18,081 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command 2023-09-10T18:45:18,082 self.distribution.run_command(command) 2023-09-10T18:45:18,083 File "/usr/local/lib/python3.11/dist-packages/setuptools/dist.py", line 1001, in run_command 2023-09-10T18:45:18,084 super().run_command(command) 2023-09-10T18:45:18,085 File "/usr/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-10T18:45:18,086 cmd_obj.run() 2023-09-10T18:45:18,087 File "/tmp/pip-wheel-901v7vg3/gff3tool_2915bd05ac7748a68af28b6559c6991a/setup.py", line 41, in run 2023-09-10T18:45:18,088 urllib.urlretrieve('https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.31/ncbi-blast-2.2.31+-x64-linux.tar.gz', blast_file) 2023-09-10T18:45:18,089 ^^^^^^^^^^^^^^^^^^ 2023-09-10T18:45:18,090 AttributeError: module 'urllib' has no attribute 'urlretrieve' 2023-09-10T18:45:18,188 ERROR: [present-rich] python setup.py bdist_wheel exited with 1 2023-09-10T18:45:18,201 [bold magenta]full command[/]: [blue]/usr/bin/python3 -u -c ' 2023-09-10T18:45:18,201 exec(compile('"'"''"'"''"'"' 2023-09-10T18:45:18,201 # This is -- a caller that pip uses to run setup.py 2023-09-10T18:45:18,201 # 2023-09-10T18:45:18,201 # - It imports setuptools before invoking setup.py, to enable projects that directly 2023-09-10T18:45:18,201 # import from `distutils.core` to work with newer packaging standards. 2023-09-10T18:45:18,201 # - It provides a clear error message when setuptools is not installed. 2023-09-10T18:45:18,201 # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so 2023-09-10T18:45:18,201 # setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning: 2023-09-10T18:45:18,201 # manifest_maker: standard file '"'"'-c'"'"' not found". 2023-09-10T18:45:18,201 # - It generates a shim setup.py, for handling setup.cfg-only projects. 2023-09-10T18:45:18,201 import os, sys, tokenize 2023-09-10T18:45:18,201 2023-09-10T18:45:18,201 try: 2023-09-10T18:45:18,201 import setuptools 2023-09-10T18:45:18,201 except ImportError as error: 2023-09-10T18:45:18,201 print( 2023-09-10T18:45:18,201 "ERROR: Can not execute `setup.py` since setuptools is not available in " 2023-09-10T18:45:18,201 "the build environment.", 2023-09-10T18:45:18,201 file=sys.stderr, 2023-09-10T18:45:18,201 ) 2023-09-10T18:45:18,201 sys.exit(1) 2023-09-10T18:45:18,201 2023-09-10T18:45:18,201 __file__ = %r 2023-09-10T18:45:18,201 sys.argv[0] = __file__ 2023-09-10T18:45:18,201 2023-09-10T18:45:18,201 if os.path.exists(__file__): 2023-09-10T18:45:18,201 filename = __file__ 2023-09-10T18:45:18,201 with tokenize.open(__file__) as f: 2023-09-10T18:45:18,201 setup_py_code = f.read() 2023-09-10T18:45:18,201 else: 2023-09-10T18:45:18,201 filename = "" 2023-09-10T18:45:18,201 setup_py_code = "from setuptools import setup; setup()" 2023-09-10T18:45:18,201 2023-09-10T18:45:18,201 exec(compile(setup_py_code, filename, "exec")) 2023-09-10T18:45:18,201 '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-901v7vg3/gff3tool_2915bd05ac7748a68af28b6559c6991a/setup.py'"'"',), "", "exec"))' bdist_wheel -d /tmp/pip-wheel-dj_uec_a[/] 2023-09-10T18:45:18,202 [bold magenta]cwd[/]: /tmp/pip-wheel-901v7vg3/gff3tool_2915bd05ac7748a68af28b6559c6991a/ 2023-09-10T18:45:18,202 Building wheel for gff3tool (setup.py): finished with status 'error' 2023-09-10T18:45:18,204 ERROR: Failed building wheel for gff3tool 2023-09-10T18:45:18,205 Running setup.py clean for gff3tool 2023-09-10T18:45:18,206 Running command python setup.py clean 2023-09-10T18:45:20,281 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-09-10T18:45:20,281 !! 2023-09-10T18:45:20,282 ******************************************************************************** 2023-09-10T18:45:20,283 Usage of dash-separated 'dist-dir' will not be supported in future 2023-09-10T18:45:20,283 versions. Please use the underscore name 'dist_dir' instead. 2023-09-10T18:45:20,285 By 2023-Sep-26, you need to update your project and remove deprecated calls 2023-09-10T18:45:20,285 or your builds will no longer be supported. 2023-09-10T18:45:20,287 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-09-10T18:45:20,288 ******************************************************************************** 2023-09-10T18:45:20,289 !! 2023-09-10T18:45:20,290 opt = self.warn_dash_deprecation(opt, section) 2023-09-10T18:45:20,602 running clean 2023-09-10T18:45:20,630 'build/lib' does not exist -- can't clean it 2023-09-10T18:45:20,631 'build/bdist.linux-armv7l' does not exist -- can't clean it 2023-09-10T18:45:20,631 'build/scripts-3.11' does not exist -- can't clean it 2023-09-10T18:45:20,741 Failed to build gff3tool 2023-09-10T18:45:20,743 ERROR: Failed to build one or more wheels 2023-09-10T18:45:20,744 Exception information: 2023-09-10T18:45:20,744 Traceback (most recent call last): 2023-09-10T18:45:20,744 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-10T18:45:20,744 status = run_func(*args) 2023-09-10T18:45:20,744 ^^^^^^^^^^^^^^^ 2023-09-10T18:45:20,744 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-10T18:45:20,744 return func(self, options, args) 2023-09-10T18:45:20,744 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-10T18:45:20,744 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-09-10T18:45:20,744 raise CommandError("Failed to build one or more wheels") 2023-09-10T18:45:20,744 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-09-10T18:45:20,748 Removed build tracker: '/tmp/pip-build-tracker-wct8kse9'