2023-09-12T01:17:51,057 Created temporary directory: /tmp/pip-build-tracker-3v69ybzj
2023-09-12T01:17:51,058 Initialized build tracking at /tmp/pip-build-tracker-3v69ybzj
2023-09-12T01:17:51,059 Created build tracker: /tmp/pip-build-tracker-3v69ybzj
2023-09-12T01:17:51,059 Entered build tracker: /tmp/pip-build-tracker-3v69ybzj
2023-09-12T01:17:51,060 Created temporary directory: /tmp/pip-wheel-o3td1tns
2023-09-12T01:17:51,063 Created temporary directory: /tmp/pip-ephem-wheel-cache-o681t3cb
2023-09-12T01:17:51,087 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-12T01:17:51,091 2 location(s) to search for versions of gff3tool:
2023-09-12T01:17:51,091 * https://pypi.org/simple/gff3tool/
2023-09-12T01:17:51,091 * https://www.piwheels.org/simple/gff3tool/
2023-09-12T01:17:51,092 Fetching project page and analyzing links: https://pypi.org/simple/gff3tool/
2023-09-12T01:17:51,093 Getting page https://pypi.org/simple/gff3tool/
2023-09-12T01:17:51,094 Found index url https://pypi.org/simple/
2023-09-12T01:17:51,234 Fetched page https://pypi.org/simple/gff3tool/ as application/vnd.pypi.simple.v1+json
2023-09-12T01:17:51,237   Found link https://files.pythonhosted.org/packages/71/33/dac2be6f38dd40d4f914814e7afe2cc5391f1bfecc77439612284de537a1/gff3tool-1.1.0.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.1.0
2023-09-12T01:17:51,238   Found link https://files.pythonhosted.org/packages/a1/f1/6630128adac220623c28a5f5ed4e6cfa070589143a0b2151237c20923149/gff3tool-1.3.0.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.3.0
2023-09-12T01:17:51,238   Found link https://files.pythonhosted.org/packages/71/cb/9b9d73fd7171571b9ad063fa3a6aac684aeebc7e958a37e2423c690d5110/gff3tool-1.4.1.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.1
2023-09-12T01:17:51,239   Found link https://files.pythonhosted.org/packages/23/bb/0b7952dfc7fb8992e6d7349eb55cbbe51e6c0750d57e33c01de5be39da46/gff3tool-1.4.2.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.2
2023-09-12T01:17:51,239   Found link https://files.pythonhosted.org/packages/7c/79/b59b3e47735edfe2ac2a9334c8e2836d63c0899b51f9badc416ae07e8353/gff3tool-1.4.3.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.3
2023-09-12T01:17:51,240   Found link https://files.pythonhosted.org/packages/cf/33/8cd85764a601bf3a5e0116f8b457c308294ec9c25139aacade6e21860335/gff3tool-1.4.4.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.4
2023-09-12T01:17:51,241   Skipping link: No binaries permitted for gff3tool: https://files.pythonhosted.org/packages/2a/4c/a16d0aae5fa870fc7630eb0536042fd3e0494467efd9f27cea6090cdbbe0/gff3tool-1.4.5-cp27-cp27m-win_amd64.whl (from https://pypi.org/simple/gff3tool/)
2023-09-12T01:17:51,242   Found link https://files.pythonhosted.org/packages/f8/78/330f714b6e771d69079128a44f61830c9ce22969eaa3b176dafb94c48809/gff3tool-1.4.5.tar.gz (from https://pypi.org/simple/gff3tool/), version: 1.4.5
2023-09-12T01:17:51,243   Found link https://files.pythonhosted.org/packages/8a/82/0f528dc498d7fdfbd6b8a968ed1cfee43ffa55461e77830a22f606aea3bb/gff3tool-2.0.0.tar.gz (from https://pypi.org/simple/gff3tool/), version: 2.0.0
2023-09-12T01:17:51,243   Found link https://files.pythonhosted.org/packages/aa/b3/cecb768a048bf2e661f0e77bf3208ed8ef203acbd93107b1f00d7b57da1e/gff3tool-2.0.1.tar.gz (from https://pypi.org/simple/gff3tool/), version: 2.0.1
2023-09-12T01:17:51,244   Found link https://files.pythonhosted.org/packages/21/2e/7e77d34adec82b4d896c8959c7993534810f8bc43cc374e984e5635bbf94/gff3tool-2.0.3.tar.gz (from https://pypi.org/simple/gff3tool/), version: 2.0.3
2023-09-12T01:17:51,245   Found link https://files.pythonhosted.org/packages/7f/12/d177f42f6e3a73dae82fd5cc89e7404de121ab381e5454ca8da11110d88a/gff3tool-2.1.0.tar.gz (from https://pypi.org/simple/gff3tool/), version: 2.1.0
2023-09-12T01:17:51,245 Fetching project page and analyzing links: https://www.piwheels.org/simple/gff3tool/
2023-09-12T01:17:51,246 Getting page https://www.piwheels.org/simple/gff3tool/
2023-09-12T01:17:51,247 Found index url https://www.piwheels.org/simple/
2023-09-12T01:17:52,106 Fetched page https://www.piwheels.org/simple/gff3tool/ as text/html
2023-09-12T01:17:52,114   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-1.1.0-py3-none-any.whl#sha256=f5eefabf7e1b27382cef033e939fd956121ebf02ae4e7085b83ade5f98c69d90 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,115   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-1.3.0-py3-none-any.whl#sha256=f993f46b60c812a88426ea96ad2c23aa521aee04c8bdad4016e21d03d6186291 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,116   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp34-cp34m-linux_armv6l.whl#sha256=a6197f7982794de21eb411313c8591f643ea19667efba72907a0fbafd47ca4e7 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,116   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp34-cp34m-linux_armv7l.whl#sha256=a6197f7982794de21eb411313c8591f643ea19667efba72907a0fbafd47ca4e7 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,116   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp35-cp35m-linux_armv6l.whl#sha256=a6d1a1bf91d08ad305f7476e9a3439e57749b4091c112cbf4f73569a4f711a68 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,117   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp35-cp35m-linux_armv7l.whl#sha256=a6d1a1bf91d08ad305f7476e9a3439e57749b4091c112cbf4f73569a4f711a68 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,117   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp37-cp37m-linux_armv6l.whl#sha256=0be9d0d0079481fcbd19198c4fba52c6703b11b043e14bc17cd9b7863857efde (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,118   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp37-cp37m-linux_armv7l.whl#sha256=0be9d0d0079481fcbd19198c4fba52c6703b11b043e14bc17cd9b7863857efde (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,118   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp39-cp39-linux_armv6l.whl#sha256=7dbbba3501c691ddb06f2ace77ee9897d1e51e32f6e05430923d4a5e53b86174 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,119   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.0-cp39-cp39-linux_armv7l.whl#sha256=7dbbba3501c691ddb06f2ace77ee9897d1e51e32f6e05430923d4a5e53b86174 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,120   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp34-cp34m-linux_armv6l.whl#sha256=fa519097d18d8d8239808e305f0bb0549b3dd93a72ed8d5ea6f45d785e6bef11 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,120   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp34-cp34m-linux_armv7l.whl#sha256=fa519097d18d8d8239808e305f0bb0549b3dd93a72ed8d5ea6f45d785e6bef11 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,121   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp35-cp35m-linux_armv6l.whl#sha256=baa47b3147a931daf4958a447f96979e4448707996cc9d60ac45ad3ebb8e9c1f (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,121   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp35-cp35m-linux_armv7l.whl#sha256=baa47b3147a931daf4958a447f96979e4448707996cc9d60ac45ad3ebb8e9c1f (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,122   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp37-cp37m-linux_armv6l.whl#sha256=88be7d8c71c322212fdc989a672f6e0f10ed299cb5615d7d34f70058a0d6f928 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,123   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp37-cp37m-linux_armv7l.whl#sha256=88be7d8c71c322212fdc989a672f6e0f10ed299cb5615d7d34f70058a0d6f928 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,123   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp39-cp39-linux_armv6l.whl#sha256=a89f1ece9e20b3183b0eba298b269f1c4b0109af60b409f5d3f7bc0be4914bfd (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,124   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.1-cp39-cp39-linux_armv7l.whl#sha256=a89f1ece9e20b3183b0eba298b269f1c4b0109af60b409f5d3f7bc0be4914bfd (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,124   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp35-cp35m-linux_armv6l.whl#sha256=ce80154080e74e3fb30b340e7a76661a4b8f3d78c6104490aa6da9c40fdc91d6 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,125   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp35-cp35m-linux_armv7l.whl#sha256=ce80154080e74e3fb30b340e7a76661a4b8f3d78c6104490aa6da9c40fdc91d6 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,125   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp37-cp37m-linux_armv6l.whl#sha256=79c3e33604c37bc449a60874dbc1520dde9140874fb47948d3a087eeec48f52f (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,125   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp37-cp37m-linux_armv7l.whl#sha256=79c3e33604c37bc449a60874dbc1520dde9140874fb47948d3a087eeec48f52f (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,126   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp39-cp39-linux_armv6l.whl#sha256=66d9164d8245e216f080754a89df8cda4192f034e99a32532198ccf3c38f6faa (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,127   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.0.3-cp39-cp39-linux_armv7l.whl#sha256=66d9164d8245e216f080754a89df8cda4192f034e99a32532198ccf3c38f6faa (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,127   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp35-cp35m-linux_armv6l.whl#sha256=5eef1c37d908cd2d30f368726348cf85a26dc4d95abc8131735de5c720d7975b (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,128   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp35-cp35m-linux_armv7l.whl#sha256=5eef1c37d908cd2d30f368726348cf85a26dc4d95abc8131735de5c720d7975b (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,128   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp37-cp37m-linux_armv6l.whl#sha256=cfe6edebe5cd63bcd5cd38e34377d8c34eb8fdc675d148da65e75d4399db5ff6 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,129   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp37-cp37m-linux_armv7l.whl#sha256=cfe6edebe5cd63bcd5cd38e34377d8c34eb8fdc675d148da65e75d4399db5ff6 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,129   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp39-cp39-linux_armv6l.whl#sha256=acb5d3cb45afefe5eab3c74db7b776dda5cf59ce38bb15cbde8edddd6079c343 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,130   Skipping link: No binaries permitted for gff3tool: https://www.piwheels.org/simple/gff3tool/gff3tool-2.1.0-cp39-cp39-linux_armv7l.whl#sha256=acb5d3cb45afefe5eab3c74db7b776dda5cf59ce38bb15cbde8edddd6079c343 (from https://www.piwheels.org/simple/gff3tool/)
2023-09-12T01:17:52,131 Skipping link: not a file: https://www.piwheels.org/simple/gff3tool/
2023-09-12T01:17:52,131 Skipping link: not a file: https://pypi.org/simple/gff3tool/
2023-09-12T01:17:52,151 Given no hashes to check 1 links for project 'gff3tool': discarding no candidates
2023-09-12T01:17:52,168 Collecting gff3tool==2.0.0
2023-09-12T01:17:52,171   Created temporary directory: /tmp/pip-unpack-vwo5rc4j
2023-09-12T01:17:52,437   Downloading gff3tool-2.0.0.tar.gz (100 kB)
2023-09-12T01:17:52,629   Added gff3tool==2.0.0 from https://files.pythonhosted.org/packages/8a/82/0f528dc498d7fdfbd6b8a968ed1cfee43ffa55461e77830a22f606aea3bb/gff3tool-2.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-3v69ybzj'
2023-09-12T01:17:52,631   Running setup.py (path:/tmp/pip-wheel-o3td1tns/gff3tool_b0f16d1d44b5411b8c4a4881949056a9/setup.py) egg_info for package gff3tool
2023-09-12T01:17:52,632   Created temporary directory: /tmp/pip-pip-egg-info-vye8og_0
2023-09-12T01:17:52,632   Preparing metadata (setup.py): started
2023-09-12T01:17:52,634   Running command python setup.py egg_info
2023-09-12T01:17:53,393   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-12T01:17:53,393   !!

2023-09-12T01:17:53,394           ********************************************************************************
2023-09-12T01:17:53,394           Usage of dash-separated 'dist-dir' will not be supported in future
2023-09-12T01:17:53,395           versions. Please use the underscore name 'dist_dir' instead.

2023-09-12T01:17:53,396           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-12T01:17:53,397           or your builds will no longer be supported.

2023-09-12T01:17:53,398           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-12T01:17:53,399           ********************************************************************************

2023-09-12T01:17:53,400   !!
2023-09-12T01:17:53,400     opt = self.warn_dash_deprecation(opt, section)
2023-09-12T01:17:53,707   running egg_info
2023-09-12T01:17:53,708   creating /tmp/pip-pip-egg-info-vye8og_0/gff3tool.egg-info
2023-09-12T01:17:53,732   writing /tmp/pip-pip-egg-info-vye8og_0/gff3tool.egg-info/PKG-INFO
2023-09-12T01:17:53,736   writing dependency_links to /tmp/pip-pip-egg-info-vye8og_0/gff3tool.egg-info/dependency_links.txt
2023-09-12T01:17:53,738   writing entry points to /tmp/pip-pip-egg-info-vye8og_0/gff3tool.egg-info/entry_points.txt
2023-09-12T01:17:53,739   writing top-level names to /tmp/pip-pip-egg-info-vye8og_0/gff3tool.egg-info/top_level.txt
2023-09-12T01:17:53,741   writing manifest file '/tmp/pip-pip-egg-info-vye8og_0/gff3tool.egg-info/SOURCES.txt'
2023-09-12T01:17:53,799   reading manifest file '/tmp/pip-pip-egg-info-vye8og_0/gff3tool.egg-info/SOURCES.txt'
2023-09-12T01:17:53,801   reading manifest template 'MANIFEST.in'
2023-09-12T01:17:53,809   writing manifest file '/tmp/pip-pip-egg-info-vye8og_0/gff3tool.egg-info/SOURCES.txt'
2023-09-12T01:17:53,926   Preparing metadata (setup.py): finished with status 'done'
2023-09-12T01:17:53,930   Source in /tmp/pip-wheel-o3td1tns/gff3tool_b0f16d1d44b5411b8c4a4881949056a9 has version 2.0.0, which satisfies requirement gff3tool==2.0.0 from https://files.pythonhosted.org/packages/8a/82/0f528dc498d7fdfbd6b8a968ed1cfee43ffa55461e77830a22f606aea3bb/gff3tool-2.0.0.tar.gz
2023-09-12T01:17:53,931   Removed gff3tool==2.0.0 from https://files.pythonhosted.org/packages/8a/82/0f528dc498d7fdfbd6b8a968ed1cfee43ffa55461e77830a22f606aea3bb/gff3tool-2.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-3v69ybzj'
2023-09-12T01:17:53,935 Created temporary directory: /tmp/pip-unpack-50_bc9di
2023-09-12T01:17:53,936 Created temporary directory: /tmp/pip-unpack-ywcv_6xd
2023-09-12T01:17:53,940 Building wheels for collected packages: gff3tool
2023-09-12T01:17:53,944   Created temporary directory: /tmp/pip-wheel-i4daqr7m
2023-09-12T01:17:53,944   Building wheel for gff3tool (setup.py): started
2023-09-12T01:17:53,945   Destination directory: /tmp/pip-wheel-i4daqr7m
2023-09-12T01:17:53,946   Running command python setup.py bdist_wheel
2023-09-12T01:17:54,898   /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:510: SetuptoolsDeprecationWarning: Invalid dash-separated options
2023-09-12T01:17:54,898   !!

2023-09-12T01:17:54,899           ********************************************************************************
2023-09-12T01:17:54,900           Usage of dash-separated 'dist-dir' will not be supported in future
2023-09-12T01:17:54,900           versions. Please use the underscore name 'dist_dir' instead.

2023-09-12T01:17:54,901           By 2023-Sep-26, you need to update your project and remove deprecated calls
2023-09-12T01:17:54,901           or your builds will no longer be supported.

2023-09-12T01:17:54,902           See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
2023-09-12T01:17:54,903           ********************************************************************************

2023-09-12T01:17:54,903   !!
2023-09-12T01:17:54,904     opt = self.warn_dash_deprecation(opt, section)
2023-09-12T01:17:55,172   running bdist_wheel
2023-09-12T01:17:55,243   running build
2023-09-12T01:18:40,645   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2023-09-12T01:18:40,646   !!

2023-09-12T01:18:40,647           ********************************************************************************
2023-09-12T01:18:40,648           Please avoid running ``setup.py`` directly.
2023-09-12T01:18:40,648           Instead, use pypa/build, pypa/installer or other
2023-09-12T01:18:40,649           standards-based tools.

2023-09-12T01:18:40,650           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2023-09-12T01:18:40,651           ********************************************************************************

2023-09-12T01:18:40,652   !!
2023-09-12T01:18:40,653     self.initialize_options()
2023-09-12T01:18:40,671   installing to build/bdist.linux-armv7l/wheel
2023-09-12T01:18:40,672   running install
2023-09-12T01:18:40,695   running install_lib
2023-09-12T01:18:40,719   running build_py
2023-09-12T01:18:40,745   creating build
2023-09-12T01:18:40,746   creating build/lib
2023-09-12T01:18:40,746   creating build/lib/gff3tool
2023-09-12T01:18:40,747   copying gff3tool/__init__.py -> build/lib/gff3tool
2023-09-12T01:18:40,750   creating build/lib/gff3tool/bin
2023-09-12T01:18:40,751   copying gff3tool/bin/gff3_sort.py -> build/lib/gff3tool/bin
2023-09-12T01:18:40,753   copying gff3tool/bin/gff3_QC.py -> build/lib/gff3tool/bin
2023-09-12T01:18:40,756   copying gff3tool/bin/gff3_merge.py -> build/lib/gff3tool/bin
2023-09-12T01:18:40,758   copying gff3tool/bin/__init__.py -> build/lib/gff3tool/bin
2023-09-12T01:18:40,759   copying gff3tool/bin/gff3_fix.py -> build/lib/gff3tool/bin
2023-09-12T01:18:40,761   copying gff3tool/bin/version.py -> build/lib/gff3tool/bin
2023-09-12T01:18:40,763   copying gff3tool/bin/gff3_to_fasta.py -> build/lib/gff3tool/bin
2023-09-12T01:18:40,767   creating build/lib/gff3tool/lib
2023-09-12T01:18:40,768   copying gff3tool/lib/gff3_ID_generator.py -> build/lib/gff3tool/lib
2023-09-12T01:18:40,770   copying gff3tool/lib/replace_OGS.py -> build/lib/gff3tool/lib
2023-09-12T01:18:40,773   copying gff3tool/lib/__init__.py -> build/lib/gff3tool/lib
2023-09-12T01:18:40,774   copying gff3tool/lib/utils.py -> build/lib/gff3tool/lib
2023-09-12T01:18:40,776   copying gff3tool/lib/id_processor.py -> build/lib/gff3tool/lib
2023-09-12T01:18:40,779   creating build/lib/gff3tool/lib/single_feature
2023-09-12T01:18:40,780   copying gff3tool/lib/single_feature/__init__.py -> build/lib/gff3tool/lib/single_feature
2023-09-12T01:18:40,782   copying gff3tool/lib/single_feature/single_feature.py -> build/lib/gff3tool/lib/single_feature
2023-09-12T01:18:40,785   creating build/lib/gff3tool/lib/function4gff
2023-09-12T01:18:40,786   copying gff3tool/lib/function4gff/function4gff.py -> build/lib/gff3tool/lib/function4gff
2023-09-12T01:18:40,788   copying gff3tool/lib/function4gff/__init__.py -> build/lib/gff3tool/lib/function4gff
2023-09-12T01:18:40,790   creating build/lib/gff3tool/lib/gff3_merge
2023-09-12T01:18:40,791   copying gff3tool/lib/gff3_merge/merge.py -> build/lib/gff3tool/lib/gff3_merge
2023-09-12T01:18:40,793   copying gff3tool/lib/gff3_merge/auto_replace_tag.py -> build/lib/gff3tool/lib/gff3_merge
2023-09-12T01:18:40,796   copying gff3tool/lib/gff3_merge/__init__.py -> build/lib/gff3tool/lib/gff3_merge
2023-09-12T01:18:40,798   copying gff3tool/lib/gff3_merge/revision.py -> build/lib/gff3tool/lib/gff3_merge
2023-09-12T01:18:40,800   creating build/lib/gff3tool/lib/gff3_fix
2023-09-12T01:18:40,801   copying gff3tool/lib/gff3_fix/__init__.py -> build/lib/gff3tool/lib/gff3_fix
2023-09-12T01:18:40,803   copying gff3tool/lib/gff3_fix/fix.py -> build/lib/gff3tool/lib/gff3_fix
2023-09-12T01:18:40,806   creating build/lib/gff3tool/lib/inter_model
2023-09-12T01:18:40,807   copying gff3tool/lib/inter_model/inter_model.py -> build/lib/gff3tool/lib/inter_model
2023-09-12T01:18:40,810   copying gff3tool/lib/inter_model/__init__.py -> build/lib/gff3tool/lib/inter_model
2023-09-12T01:18:40,812   creating build/lib/gff3tool/lib/ERROR
2023-09-12T01:18:40,813   copying gff3tool/lib/ERROR/ERROR.py -> build/lib/gff3tool/lib/ERROR
2023-09-12T01:18:40,814   copying gff3tool/lib/ERROR/__init__.py -> build/lib/gff3tool/lib/ERROR
2023-09-12T01:18:40,817   creating build/lib/gff3tool/lib/gff3
2023-09-12T01:18:40,818   copying gff3tool/lib/gff3/__init__.py -> build/lib/gff3tool/lib/gff3
2023-09-12T01:18:40,819   copying gff3tool/lib/gff3/gff3.py -> build/lib/gff3tool/lib/gff3
2023-09-12T01:18:40,823   creating build/lib/gff3tool/lib/intra_model
2023-09-12T01:18:40,824   copying gff3tool/lib/intra_model/__init__.py -> build/lib/gff3tool/lib/intra_model
2023-09-12T01:18:40,826   copying gff3tool/lib/intra_model/intra_model.py -> build/lib/gff3tool/lib/intra_model
2023-09-12T01:18:40,828   running egg_info
2023-09-12T01:18:40,884   writing gff3tool.egg-info/PKG-INFO
2023-09-12T01:18:40,888   writing dependency_links to gff3tool.egg-info/dependency_links.txt
2023-09-12T01:18:40,889   writing entry points to gff3tool.egg-info/entry_points.txt
2023-09-12T01:18:40,891   writing top-level names to gff3tool.egg-info/top_level.txt
2023-09-12T01:18:40,922   reading manifest file 'gff3tool.egg-info/SOURCES.txt'
2023-09-12T01:18:40,925   reading manifest template 'MANIFEST.in'
2023-09-12T01:18:40,936   writing manifest file 'gff3tool.egg-info/SOURCES.txt'
2023-09-12T01:18:40,938   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'gff3tool.lib.auto_assignment' is absent from the `packages` configuration.
2023-09-12T01:18:40,939   !!

2023-09-12T01:18:40,940           ********************************************************************************
2023-09-12T01:18:40,940           ############################
2023-09-12T01:18:40,941           # Package would be ignored #
2023-09-12T01:18:40,942           ############################
2023-09-12T01:18:40,943           Python recognizes 'gff3tool.lib.auto_assignment' as an importable package[^1],
2023-09-12T01:18:40,943           but it is absent from setuptools' `packages` configuration.

2023-09-12T01:18:40,944           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-12T01:18:40,945           package, please make sure that 'gff3tool.lib.auto_assignment' is explicitly added
2023-09-12T01:18:40,946           to the `packages` configuration field.

2023-09-12T01:18:40,947           Alternatively, you can also rely on setuptools' discovery methods
2023-09-12T01:18:40,947           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-12T01:18:40,948           instead of `find_packages(...)`/`find:`).

2023-09-12T01:18:40,949           You can read more about "package discovery" on setuptools documentation page:

2023-09-12T01:18:40,950           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-12T01:18:40,950           If you don't want 'gff3tool.lib.auto_assignment' to be distributed and are
2023-09-12T01:18:40,951           already explicitly excluding 'gff3tool.lib.auto_assignment' via
2023-09-12T01:18:40,951           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-12T01:18:40,952           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-12T01:18:40,952           combination with a more fine grained `package-data` configuration.

2023-09-12T01:18:40,953           You can read more about "package data files" on setuptools documentation page:

2023-09-12T01:18:40,954           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-12T01:18:40,955           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-12T01:18:40,956                 even if it does not contain any `.py` files.
2023-09-12T01:18:40,956                 On the other hand, currently there is no concept of package data
2023-09-12T01:18:40,957                 directory, all directories are treated like packages.
2023-09-12T01:18:40,957           ********************************************************************************

2023-09-12T01:18:40,958   !!
2023-09-12T01:18:40,959     check.warn(importable)
2023-09-12T01:18:40,959   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'gff3tool.lib.check_gene_parent' is absent from the `packages` configuration.
2023-09-12T01:18:40,960   !!

2023-09-12T01:18:40,961           ********************************************************************************
2023-09-12T01:18:40,961           ############################
2023-09-12T01:18:40,962           # Package would be ignored #
2023-09-12T01:18:40,962           ############################
2023-09-12T01:18:40,963           Python recognizes 'gff3tool.lib.check_gene_parent' as an importable package[^1],
2023-09-12T01:18:40,963           but it is absent from setuptools' `packages` configuration.

2023-09-12T01:18:40,964           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-12T01:18:40,965           package, please make sure that 'gff3tool.lib.check_gene_parent' is explicitly added
2023-09-12T01:18:40,965           to the `packages` configuration field.

2023-09-12T01:18:40,967           Alternatively, you can also rely on setuptools' discovery methods
2023-09-12T01:18:40,967           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-12T01:18:40,968           instead of `find_packages(...)`/`find:`).

2023-09-12T01:18:40,969           You can read more about "package discovery" on setuptools documentation page:

2023-09-12T01:18:40,970           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-12T01:18:40,971           If you don't want 'gff3tool.lib.check_gene_parent' to be distributed and are
2023-09-12T01:18:40,972           already explicitly excluding 'gff3tool.lib.check_gene_parent' via
2023-09-12T01:18:40,972           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-12T01:18:40,973           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-12T01:18:40,973           combination with a more fine grained `package-data` configuration.

2023-09-12T01:18:40,975           You can read more about "package data files" on setuptools documentation page:

2023-09-12T01:18:40,976           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-12T01:18:40,978           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-12T01:18:40,979                 even if it does not contain any `.py` files.
2023-09-12T01:18:40,980                 On the other hand, currently there is no concept of package data
2023-09-12T01:18:40,980                 directory, all directories are treated like packages.
2023-09-12T01:18:40,981           ********************************************************************************

2023-09-12T01:18:40,982   !!
2023-09-12T01:18:40,982     check.warn(importable)
2023-09-12T01:18:40,982   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'gff3tool.lib.gff3.__pycache__' is absent from the `packages` configuration.
2023-09-12T01:18:40,983   !!

2023-09-12T01:18:40,984           ********************************************************************************
2023-09-12T01:18:40,984           ############################
2023-09-12T01:18:40,985           # Package would be ignored #
2023-09-12T01:18:40,985           ############################
2023-09-12T01:18:40,985           Python recognizes 'gff3tool.lib.gff3.__pycache__' as an importable package[^1],
2023-09-12T01:18:40,986           but it is absent from setuptools' `packages` configuration.

2023-09-12T01:18:40,987           This leads to an ambiguous overall configuration. If you want to distribute this
2023-09-12T01:18:40,987           package, please make sure that 'gff3tool.lib.gff3.__pycache__' is explicitly added
2023-09-12T01:18:40,988           to the `packages` configuration field.

2023-09-12T01:18:40,988           Alternatively, you can also rely on setuptools' discovery methods
2023-09-12T01:18:40,989           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-09-12T01:18:40,990           instead of `find_packages(...)`/`find:`).

2023-09-12T01:18:40,991           You can read more about "package discovery" on setuptools documentation page:

2023-09-12T01:18:40,992           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-09-12T01:18:40,993           If you don't want 'gff3tool.lib.gff3.__pycache__' to be distributed and are
2023-09-12T01:18:40,994           already explicitly excluding 'gff3tool.lib.gff3.__pycache__' via
2023-09-12T01:18:40,995           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-09-12T01:18:40,995           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-09-12T01:18:40,996           combination with a more fine grained `package-data` configuration.

2023-09-12T01:18:40,997           You can read more about "package data files" on setuptools documentation page:

2023-09-12T01:18:40,999           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-09-12T01:18:41,001           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-09-12T01:18:41,001                 even if it does not contain any `.py` files.
2023-09-12T01:18:41,002                 On the other hand, currently there is no concept of package data
2023-09-12T01:18:41,002                 directory, all directories are treated like packages.
2023-09-12T01:18:41,003           ********************************************************************************

2023-09-12T01:18:41,004   !!
2023-09-12T01:18:41,004     check.warn(importable)
2023-09-12T01:18:41,005   copying gff3tool/lib.md -> build/lib/gff3tool
2023-09-12T01:18:41,006   creating build/lib/gff3tool/lib/auto_assignment
2023-09-12T01:18:41,006   copying gff3tool/lib/auto_assignment/create_annotation_summaries_nov21-7.pl -> build/lib/gff3tool/lib/auto_assignment
2023-09-12T01:18:41,007   copying gff3tool/lib/auto_assignment/find_match.pl -> build/lib/gff3tool/lib/auto_assignment
2023-09-12T01:18:41,007   copying gff3tool/lib/auto_assignment/gen_spreadsheet.pl -> build/lib/gff3tool/lib/auto_assignment
2023-09-12T01:18:41,008   creating build/lib/gff3tool/lib/check_gene_parent
2023-09-12T01:18:41,009   copying gff3tool/lib/check_gene_parent/find_wrongly_split_gene_parent.pl -> build/lib/gff3tool/lib/check_gene_parent
2023-09-12T01:18:41,010   creating build/lib/gff3tool/lib/ncbi-blast+
2023-09-12T01:18:41,011   creating build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:41,011   copying gff3tool/lib/ncbi-blast+/bin/blast_formatter -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:41,417   copying gff3tool/lib/ncbi-blast+/bin/blastdb_aliastool -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:41,715   copying gff3tool/lib/ncbi-blast+/bin/blastdbcheck -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:42,034   copying gff3tool/lib/ncbi-blast+/bin/blastdbcmd -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:42,469   copying gff3tool/lib/ncbi-blast+/bin/blastn -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:42,937   copying gff3tool/lib/ncbi-blast+/bin/blastp -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:43,423   copying gff3tool/lib/ncbi-blast+/bin/blastx -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:43,880   copying gff3tool/lib/ncbi-blast+/bin/convert2blastmask -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:44,876   copying gff3tool/lib/ncbi-blast+/bin/deltablast -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:46,020   copying gff3tool/lib/ncbi-blast+/bin/dustmasker -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:46,320   copying gff3tool/lib/ncbi-blast+/bin/legacy_blast.pl -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:46,323   copying gff3tool/lib/ncbi-blast+/bin/makeblastdb -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:46,799   copying gff3tool/lib/ncbi-blast+/bin/makembindex -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:47,111   copying gff3tool/lib/ncbi-blast+/bin/makeprofiledb -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:48,227   copying gff3tool/lib/ncbi-blast+/bin/psiblast -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:49,210   copying gff3tool/lib/ncbi-blast+/bin/rpsblast -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:49,800   copying gff3tool/lib/ncbi-blast+/bin/rpstblastn -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:50,337   copying gff3tool/lib/ncbi-blast+/bin/segmasker -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:50,842   copying gff3tool/lib/ncbi-blast+/bin/tblastn -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:51,821   copying gff3tool/lib/ncbi-blast+/bin/tblastx -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:53,730   copying gff3tool/lib/ncbi-blast+/bin/update_blastdb.pl -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:53,734   copying gff3tool/lib/ncbi-blast+/bin/windowmasker -> build/lib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:54,267   creating build/lib/gff3tool/lib/gff3/__pycache__
2023-09-12T01:18:54,268   copying gff3tool/lib/gff3/__pycache__/__init__.cpython-36.pyc -> build/lib/gff3tool/lib/gff3/__pycache__
2023-09-12T01:18:54,271   copying gff3tool/lib/gff3/__pycache__/gff3.cpython-36.pyc -> build/lib/gff3tool/lib/gff3/__pycache__
2023-09-12T01:18:54,282   creating build/bdist.linux-armv7l
2023-09-12T01:18:54,283   creating build/bdist.linux-armv7l/wheel
2023-09-12T01:18:54,284   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data
2023-09-12T01:18:54,285   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib
2023-09-12T01:18:54,287   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool
2023-09-12T01:18:54,288   copying build/lib/gff3tool/lib.md -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool
2023-09-12T01:18:54,291   copying build/lib/gff3tool/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool
2023-09-12T01:18:54,293   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/bin
2023-09-12T01:18:54,294   copying build/lib/gff3tool/bin/gff3_sort.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/bin
2023-09-12T01:18:54,298   copying build/lib/gff3tool/bin/gff3_QC.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/bin
2023-09-12T01:18:54,301   copying build/lib/gff3tool/bin/gff3_merge.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/bin
2023-09-12T01:18:54,304   copying build/lib/gff3tool/bin/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/bin
2023-09-12T01:18:54,307   copying build/lib/gff3tool/bin/gff3_fix.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/bin
2023-09-12T01:18:54,309   copying build/lib/gff3tool/bin/version.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/bin
2023-09-12T01:18:54,312   copying build/lib/gff3tool/bin/gff3_to_fasta.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/bin
2023-09-12T01:18:54,316   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib
2023-09-12T01:18:54,317   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/single_feature
2023-09-12T01:18:54,319   copying build/lib/gff3tool/lib/single_feature/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/single_feature
2023-09-12T01:18:54,321   copying build/lib/gff3tool/lib/single_feature/single_feature.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/single_feature
2023-09-12T01:18:54,323   copying build/lib/gff3tool/lib/gff3_ID_generator.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib
2023-09-12T01:18:54,327   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/auto_assignment
2023-09-12T01:18:54,327   copying build/lib/gff3tool/lib/auto_assignment/gen_spreadsheet.pl -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/auto_assignment
2023-09-12T01:18:54,329   copying build/lib/gff3tool/lib/auto_assignment/find_match.pl -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/auto_assignment
2023-09-12T01:18:54,331   copying build/lib/gff3tool/lib/auto_assignment/create_annotation_summaries_nov21-7.pl -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/auto_assignment
2023-09-12T01:18:54,334   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/function4gff
2023-09-12T01:18:54,335   copying build/lib/gff3tool/lib/function4gff/function4gff.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/function4gff
2023-09-12T01:18:54,338   copying build/lib/gff3tool/lib/function4gff/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/function4gff
2023-09-12T01:18:54,339   copying build/lib/gff3tool/lib/replace_OGS.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib
2023-09-12T01:18:54,342   copying build/lib/gff3tool/lib/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib
2023-09-12T01:18:54,344   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/check_gene_parent
2023-09-12T01:18:54,345   copying build/lib/gff3tool/lib/check_gene_parent/find_wrongly_split_gene_parent.pl -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/check_gene_parent
2023-09-12T01:18:54,348   copying build/lib/gff3tool/lib/utils.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib
2023-09-12T01:18:54,350   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_merge
2023-09-12T01:18:54,351   copying build/lib/gff3tool/lib/gff3_merge/merge.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_merge
2023-09-12T01:18:54,354   copying build/lib/gff3tool/lib/gff3_merge/auto_replace_tag.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_merge
2023-09-12T01:18:54,357   copying build/lib/gff3tool/lib/gff3_merge/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_merge
2023-09-12T01:18:54,359   copying build/lib/gff3tool/lib/gff3_merge/revision.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_merge
2023-09-12T01:18:54,362   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+
2023-09-12T01:18:54,364   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:54,365   copying build/lib/gff3tool/lib/ncbi-blast+/bin/blastn -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:55,667   copying build/lib/gff3tool/lib/ncbi-blast+/bin/psiblast -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:56,590   copying build/lib/gff3tool/lib/ncbi-blast+/bin/convert2blastmask -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:58,558   copying build/lib/gff3tool/lib/ncbi-blast+/bin/blastdbcheck -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:18:59,248   copying build/lib/gff3tool/lib/ncbi-blast+/bin/makembindex -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:00,591   copying build/lib/gff3tool/lib/ncbi-blast+/bin/dustmasker -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:00,914   copying build/lib/gff3tool/lib/ncbi-blast+/bin/makeblastdb -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:01,331   copying build/lib/gff3tool/lib/ncbi-blast+/bin/blastdb_aliastool -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:01,806   copying build/lib/gff3tool/lib/ncbi-blast+/bin/deltablast -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:03,458   copying build/lib/gff3tool/lib/ncbi-blast+/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:03,462   copying build/lib/gff3tool/lib/ncbi-blast+/bin/rpstblastn -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:03,949   copying build/lib/gff3tool/lib/ncbi-blast+/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:03,951   copying build/lib/gff3tool/lib/ncbi-blast+/bin/blastp -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:06,714   copying build/lib/gff3tool/lib/ncbi-blast+/bin/blast_formatter -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:08,286   copying build/lib/gff3tool/lib/ncbi-blast+/bin/segmasker -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:08,603   copying build/lib/gff3tool/lib/ncbi-blast+/bin/tblastx -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:09,075   copying build/lib/gff3tool/lib/ncbi-blast+/bin/tblastn -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:11,132   copying build/lib/gff3tool/lib/ncbi-blast+/bin/makeprofiledb -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:11,669   copying build/lib/gff3tool/lib/ncbi-blast+/bin/windowmasker -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:12,127   copying build/lib/gff3tool/lib/ncbi-blast+/bin/rpsblast -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:15,682   copying build/lib/gff3tool/lib/ncbi-blast+/bin/blastdbcmd -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:16,111   copying build/lib/gff3tool/lib/ncbi-blast+/bin/blastx -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin
2023-09-12T01:19:16,929   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_fix
2023-09-12T01:19:16,931   copying build/lib/gff3tool/lib/gff3_fix/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_fix
2023-09-12T01:19:16,932   copying build/lib/gff3tool/lib/gff3_fix/fix.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_fix
2023-09-12T01:19:16,935   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/inter_model
2023-09-12T01:19:16,936   copying build/lib/gff3tool/lib/inter_model/inter_model.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/inter_model
2023-09-12T01:19:16,938   copying build/lib/gff3tool/lib/inter_model/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/inter_model
2023-09-12T01:19:16,940   copying build/lib/gff3tool/lib/id_processor.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib
2023-09-12T01:19:16,943   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ERROR
2023-09-12T01:19:16,943   copying build/lib/gff3tool/lib/ERROR/ERROR.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ERROR
2023-09-12T01:19:16,945   copying build/lib/gff3tool/lib/ERROR/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/ERROR
2023-09-12T01:19:16,947   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3
2023-09-12T01:19:16,948   copying build/lib/gff3tool/lib/gff3/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3
2023-09-12T01:19:16,950   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3/__pycache__
2023-09-12T01:19:16,951   copying build/lib/gff3tool/lib/gff3/__pycache__/gff3.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3/__pycache__
2023-09-12T01:19:16,955   copying build/lib/gff3tool/lib/gff3/__pycache__/__init__.cpython-36.pyc -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3/__pycache__
2023-09-12T01:19:16,956   copying build/lib/gff3tool/lib/gff3/gff3.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3
2023-09-12T01:19:16,960   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/intra_model
2023-09-12T01:19:16,961   copying build/lib/gff3tool/lib/intra_model/__init__.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/intra_model
2023-09-12T01:19:16,963   copying build/lib/gff3tool/lib/intra_model/intra_model.py -> build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool/lib/intra_model
2023-09-12T01:19:16,965   running install_egg_info
2023-09-12T01:19:17,013   Copying gff3tool.egg-info to build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.data/purelib/gff3tool-2.0.0-py3.11.egg-info
2023-09-12T01:19:17,023   running install_scripts
2023-09-12T01:19:17,074   creating build/bdist.linux-armv7l/wheel/gff3tool-2.0.0.dist-info/WHEEL
2023-09-12T01:19:17,077   creating '/tmp/pip-wheel-i4daqr7m/gff3tool-2.0.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-12T01:19:17,080   adding 'gff3tool-2.0.0.data/purelib/gff3tool/__init__.py'
2023-09-12T01:19:17,081   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib.md'
2023-09-12T01:19:17,083   adding 'gff3tool-2.0.0.data/purelib/gff3tool/bin/__init__.py'
2023-09-12T01:19:17,085   adding 'gff3tool-2.0.0.data/purelib/gff3tool/bin/gff3_QC.py'
2023-09-12T01:19:17,086   adding 'gff3tool-2.0.0.data/purelib/gff3tool/bin/gff3_fix.py'
2023-09-12T01:19:17,088   adding 'gff3tool-2.0.0.data/purelib/gff3tool/bin/gff3_merge.py'
2023-09-12T01:19:17,091   adding 'gff3tool-2.0.0.data/purelib/gff3tool/bin/gff3_sort.py'
2023-09-12T01:19:17,095   adding 'gff3tool-2.0.0.data/purelib/gff3tool/bin/gff3_to_fasta.py'
2023-09-12T01:19:17,097   adding 'gff3tool-2.0.0.data/purelib/gff3tool/bin/version.py'
2023-09-12T01:19:17,098   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/__init__.py'
2023-09-12T01:19:17,100   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_ID_generator.py'
2023-09-12T01:19:17,103   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/id_processor.py'
2023-09-12T01:19:17,107   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/replace_OGS.py'
2023-09-12T01:19:17,109   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/utils.py'
2023-09-12T01:19:17,110   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ERROR/ERROR.py'
2023-09-12T01:19:17,112   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ERROR/__init__.py'
2023-09-12T01:19:17,114   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/auto_assignment/create_annotation_summaries_nov21-7.pl'
2023-09-12T01:19:17,116   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/auto_assignment/find_match.pl'
2023-09-12T01:19:17,117   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/auto_assignment/gen_spreadsheet.pl'
2023-09-12T01:19:17,119   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/check_gene_parent/find_wrongly_split_gene_parent.pl'
2023-09-12T01:19:17,121   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/function4gff/__init__.py'
2023-09-12T01:19:17,122   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/function4gff/function4gff.py'
2023-09-12T01:19:17,124   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3/__init__.py'
2023-09-12T01:19:17,132   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3/gff3.py'
2023-09-12T01:19:17,134   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3/__pycache__/__init__.cpython-36.pyc'
2023-09-12T01:19:17,141   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3/__pycache__/gff3.cpython-36.pyc'
2023-09-12T01:19:17,143   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_fix/__init__.py'
2023-09-12T01:19:17,147   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_fix/fix.py'
2023-09-12T01:19:17,149   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_merge/__init__.py'
2023-09-12T01:19:17,151   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_merge/auto_replace_tag.py'
2023-09-12T01:19:17,153   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_merge/merge.py'
2023-09-12T01:19:17,155   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/gff3_merge/revision.py'
2023-09-12T01:19:17,157   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/inter_model/__init__.py'
2023-09-12T01:19:17,159   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/inter_model/inter_model.py'
2023-09-12T01:19:17,160   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/intra_model/__init__.py'
2023-09-12T01:19:17,162   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/intra_model/intra_model.py'
2023-09-12T01:19:22,096   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/blast_formatter'
2023-09-12T01:19:25,417   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/blastdb_aliastool'
2023-09-12T01:19:29,114   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/blastdbcheck'
2023-09-12T01:19:33,657   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/blastdbcmd'
2023-09-12T01:19:38,816   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/blastn'
2023-09-12T01:19:44,009   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/blastp'
2023-09-12T01:19:49,580   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/blastx'
2023-09-12T01:19:53,154   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/convert2blastmask'
2023-09-12T01:19:58,271   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/deltablast'
2023-09-12T01:20:01,926   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/dustmasker'
2023-09-12T01:20:02,101   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/legacy_blast.pl'
2023-09-12T01:20:05,817   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/makeblastdb'
2023-09-12T01:20:09,541   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/makembindex'
2023-09-12T01:20:13,095   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/makeprofiledb'
2023-09-12T01:20:18,611   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/psiblast'
2023-09-12T01:20:23,899   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/rpsblast'
2023-09-12T01:20:29,254   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/rpstblastn'
2023-09-12T01:20:32,884   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/segmasker'
2023-09-12T01:20:38,091   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/tblastn'
2023-09-12T01:20:43,803   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/tblastx'
2023-09-12T01:20:44,067   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/update_blastdb.pl'
2023-09-12T01:20:48,128   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/ncbi-blast+/bin/windowmasker'
2023-09-12T01:20:48,334   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/single_feature/__init__.py'
2023-09-12T01:20:48,336   adding 'gff3tool-2.0.0.data/purelib/gff3tool/lib/single_feature/single_feature.py'
2023-09-12T01:20:48,339   adding 'gff3tool-2.0.0.dist-info/METADATA'
2023-09-12T01:20:48,340   adding 'gff3tool-2.0.0.dist-info/WHEEL'
2023-09-12T01:20:48,342   adding 'gff3tool-2.0.0.dist-info/entry_points.txt'
2023-09-12T01:20:48,343   adding 'gff3tool-2.0.0.dist-info/top_level.txt'
2023-09-12T01:20:48,345   adding 'gff3tool-2.0.0.dist-info/RECORD'
2023-09-12T01:20:48,547   removing build/bdist.linux-armv7l/wheel
2023-09-12T01:20:48,876   Building wheel for gff3tool (setup.py): finished with status 'done'
2023-09-12T01:20:52,962   Created wheel for gff3tool: filename=gff3tool-2.0.0-cp311-cp311-linux_armv7l.whl size=177080901 sha256=036c36c64ae995bbd9b6234e9f0b2fdaed36e2a4869fa2885c0fa449d01f6bd1
2023-09-12T01:20:52,964   Stored in directory: /tmp/pip-ephem-wheel-cache-o681t3cb/wheels/ca/d3/3a/f5b33c08f8af7eea08026640e70e2cda23eddb4de41460ad07
2023-09-12T01:20:53,060 Successfully built gff3tool
2023-09-12T01:20:57,051 Removed build tracker: '/tmp/pip-build-tracker-3v69ybzj'