2023-09-14T17:50:43,341 Created temporary directory: /tmp/pip-build-tracker-15ggm6_6 2023-09-14T17:50:43,342 Initialized build tracking at /tmp/pip-build-tracker-15ggm6_6 2023-09-14T17:50:43,343 Created build tracker: /tmp/pip-build-tracker-15ggm6_6 2023-09-14T17:50:43,343 Entered build tracker: /tmp/pip-build-tracker-15ggm6_6 2023-09-14T17:50:43,344 Created temporary directory: /tmp/pip-wheel-196mz4e4 2023-09-14T17:50:43,347 Created temporary directory: /tmp/pip-ephem-wheel-cache-dvecqakm 2023-09-14T17:50:43,369 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-14T17:50:43,373 2 location(s) to search for versions of westpa: 2023-09-14T17:50:43,373 * https://pypi.org/simple/westpa/ 2023-09-14T17:50:43,373 * https://www.piwheels.org/simple/westpa/ 2023-09-14T17:50:43,374 Fetching project page and analyzing links: https://pypi.org/simple/westpa/ 2023-09-14T17:50:43,375 Getting page https://pypi.org/simple/westpa/ 2023-09-14T17:50:43,376 Found index url https://pypi.org/simple/ 2023-09-14T17:50:43,660 Fetched page https://pypi.org/simple/westpa/ as application/vnd.pypi.simple.v1+json 2023-09-14T17:50:43,667 Found link https://files.pythonhosted.org/packages/a8/57/c4b43d48677bb48b620e3f0cda3c71aa997ab3a039ba4ba0cb05d807df19/westpa-0.0.2.tar.gz (from https://pypi.org/simple/westpa/), version: 0.0.2 2023-09-14T17:50:43,668 Found link https://files.pythonhosted.org/packages/b0/49/26240704f4fcc44e3187b617d080c7b96a1f8b4004a79b19b189bf738a49/westpa-0.0.3.tar.gz (from https://pypi.org/simple/westpa/), version: 0.0.3 2023-09-14T17:50:43,669 Found link https://files.pythonhosted.org/packages/d6/81/c5fea3140456e5d1317e3ed32e1d5e01f2e9452cd100b0b3656b67cada3c/westpa-2.0.dev1.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2.0.dev1 2023-09-14T17:50:43,670 Found link https://files.pythonhosted.org/packages/fe/e9/e9ef53a71a73dfe76a8875a8eb2ce1c16942a7878502270922c5fdc8016f/westpa-2.0b5.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2.0b5 2023-09-14T17:50:43,671 Found link https://files.pythonhosted.org/packages/30/04/9821a74c5a60f831f54226e64454b172bfe7c5c84a505198aaa13058faa3/westpa-2022.1.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.1 2023-09-14T17:50:43,672 Found link https://files.pythonhosted.org/packages/30/c8/6eb627254809162a3b520723f678de9788be3fa1377bd5d943561130e5c8/westpa-2022.2.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.2 2023-09-14T17:50:43,673 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/69/0e/ec12d6ca2d3a2af50e8e93dc9a29731e37309751f2ec5786963638e73401/westpa-2022.3-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,673 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/b7/63/69efad20133b8ce5096cf01b8572116688e45d2eb874ac38de718ff50ede/westpa-2022.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,674 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/36/d2/76b2259196de2b10667808baf22c302cdac0e211f58d18a149dbd6974d25/westpa-2022.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,674 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/df/55/09ef147d70a6cb997d904f5094f05525ae5aa23ef9a7b0fe4a78448b7f83/westpa-2022.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,675 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/11/12/bab6b8aa12f6af86cbade87c82ce104e9b084dd5848b2cdd7894c4777c75/westpa-2022.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,676 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/b9/9c/9a76bebd1bd2a42e0cc16d21be5d84b89b4807a1a44875764188bb5b75ff/westpa-2022.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,676 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/9b/a3/e580004b1202a1f78f412994d2182e72dc029303e90e925e87f403387424/westpa-2022.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,677 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/30/f4/3dd7940c7c33b835729ea0c36429270aa9eba85f88eb3c9c72c16ae1b586/westpa-2022.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,678 Found link https://files.pythonhosted.org/packages/a1/a5/e82ed1cf2a3d3edd0350329da58d166bfff5601c07174076f76d3b7f2628/westpa-2022.3.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.3 2023-09-14T17:50:43,679 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/52/68/14e017cd84baec15ea6b88544153ac57109e1711f3ceb8682743fb4c1b4c/westpa-2022.4-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,679 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/3e/d0/88ad29bc7956e1c060501043bffdf134a0464f62b84d52c370ac537bb03d/westpa-2022.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,680 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/21/41/a8e7663bc0836e3a7cb93e7be0bb6e47f31ae054bd499cbd36bf01911ce3/westpa-2022.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,680 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/fd/15/cc3188fb79584322e4af515bf31c25154bbf2aba5917d9da5dd0a1f491d5/westpa-2022.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,681 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/24/24/e4380e00ca84dd2ab03db35aba7c72451eacb92ebae0dbd3e9de0aa21165/westpa-2022.4-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,681 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/93/1f/f5a9032c1012a4f1ace13eb9093e1728f0d9d9a61f3869a6a6c6e2c034ce/westpa-2022.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,682 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/7c/82/4e7d62a526cf73294131f851c482a32d48e99ea5a925f67afea20b079055/westpa-2022.4-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,682 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/fc/33/5fcbfd10fc416548c71240e08f39a10e6c342aeea41664d383de4e5ce105/westpa-2022.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,683 Found link https://files.pythonhosted.org/packages/72/5e/c9bf1571544cc7b7806d6d847ac896febe714b9c9a1e3789e457399a91fd/westpa-2022.4.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.4 2023-09-14T17:50:43,684 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/fa/9a/348dbaf04bf8c9a18b44a01d676e354154dbf25dd29b503d8aad12b979e5/westpa-2022.5-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,685 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/aa/1e/d71b9013e2d531b5e7c3bdbb841bdd8aa210ce69bccfcc0e5b7536f6f822/westpa-2022.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,685 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/09/8f/2e98390c7dd1d68e89ae77751f9c925bbd53ea436715bb3df29734a6ef1e/westpa-2022.5-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,686 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/10/54/1e68102cfc5256e817af48914a434a0ef39429d12be44edd9b123e45609f/westpa-2022.5-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,686 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/cf/ed/0d39fce58f3f524cce9ea157eb23606a1f9ec8774a474426f5407226da6c/westpa-2022.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,687 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/c6/81/72e1c125d71aa030efad147277a30c95fde09123a3afcb8d1b13e41561e0/westpa-2022.5-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,687 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/cd/0e/2d64005041bef9385c0b7064bfb332ca2aa383db3b7ea718eb50f738302c/westpa-2022.5-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,688 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/4b/fc/cb3f90c44be96986c1e2e84dd8ade75a0d027c980bbbc1a16cb57d7fb152/westpa-2022.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,688 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/75/ff/b7fa21ff0f42d9a6ed4d910a4caeac9bec6ad16e1448be93e4589466f122/westpa-2022.5-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,689 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/25/67/e625375bc0eec995ba44a95095357dfa53ff5c4c879050db17159ad82c11/westpa-2022.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,690 Found link https://files.pythonhosted.org/packages/3f/47/4b8d30ba9e1c2d6d37ed73e58cf643815e35f0f5cfa591aac166b5250a7f/westpa-2022.5.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.5 2023-09-14T17:50:43,691 Fetching project page and analyzing links: https://www.piwheels.org/simple/westpa/ 2023-09-14T17:50:43,692 Getting page https://www.piwheels.org/simple/westpa/ 2023-09-14T17:50:43,694 Found index url https://www.piwheels.org/simple/ 2023-09-14T17:50:43,981 Fetched page https://www.piwheels.org/simple/westpa/ as text/html 2023-09-14T17:50:43,993 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp39-cp39-linux_armv7l.whl#sha256=dc3a16c2582e1b713fdfc52b6504297d44e84e5c6e8538cdab3b603659b22d4b (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,993 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp39-cp39-linux_armv6l.whl#sha256=dc3a16c2582e1b713fdfc52b6504297d44e84e5c6e8538cdab3b603659b22d4b (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,994 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp37-cp37m-linux_armv7l.whl#sha256=6d321f54582ced0d7e39f606c95fadd59509a9692dc648daaa1067964429efee (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,995 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp37-cp37m-linux_armv6l.whl#sha256=6d321f54582ced0d7e39f606c95fadd59509a9692dc648daaa1067964429efee (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,995 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp39-cp39-linux_armv7l.whl#sha256=1adb91bb4eb598a71a766ccec6dc257cb4a4b6823fc6388930d564a72d0de8d7 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,996 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp39-cp39-linux_armv6l.whl#sha256=1adb91bb4eb598a71a766ccec6dc257cb4a4b6823fc6388930d564a72d0de8d7 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,996 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp37-cp37m-linux_armv7l.whl#sha256=67bc07f5def229a4155f399a75dcc7899dbdd1c38d53f3a68f1113b6cff39d10 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,997 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp37-cp37m-linux_armv6l.whl#sha256=67bc07f5def229a4155f399a75dcc7899dbdd1c38d53f3a68f1113b6cff39d10 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,997 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp39-cp39-linux_armv7l.whl#sha256=367492cb97cca120064cada5515b1f843953994d9b05bf528714ea59b506054e (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,997 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp39-cp39-linux_armv6l.whl#sha256=367492cb97cca120064cada5515b1f843953994d9b05bf528714ea59b506054e (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,998 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp37-cp37m-linux_armv7l.whl#sha256=aef03bdc7de5e2a121a7556fb13895722a03a5fffc6eaa42589479d0904f809c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,999 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp37-cp37m-linux_armv6l.whl#sha256=aef03bdc7de5e2a121a7556fb13895722a03a5fffc6eaa42589479d0904f809c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,999 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.2-cp39-cp39-linux_armv7l.whl#sha256=8612efd8791ddd3a3061c62f950e19262acc2be82c6ff488fd82eefd517c6bb9 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:43,999 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.2-cp39-cp39-linux_armv6l.whl#sha256=8612efd8791ddd3a3061c62f950e19262acc2be82c6ff488fd82eefd517c6bb9 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,000 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.2-cp37-cp37m-linux_armv7l.whl#sha256=bad9dd07c3ff32f2282482caedc0b82c861fea2adeb9a7f4c07f62fec17c82f5 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,000 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.2-cp37-cp37m-linux_armv6l.whl#sha256=bad9dd07c3ff32f2282482caedc0b82c861fea2adeb9a7f4c07f62fec17c82f5 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,001 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.1-cp39-cp39-linux_armv7l.whl#sha256=20399dd4213b8187771d60f0f6a0aab6a48b8865887ba8e9c017318c1f19369d (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,001 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.1-cp39-cp39-linux_armv6l.whl#sha256=20399dd4213b8187771d60f0f6a0aab6a48b8865887ba8e9c017318c1f19369d (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,002 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.1-cp37-cp37m-linux_armv7l.whl#sha256=f19822caaaa1c0fb2b7c1a7147429df8125c622b19f139f29a031e4aeeffe46c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,003 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.1-cp37-cp37m-linux_armv6l.whl#sha256=f19822caaaa1c0fb2b7c1a7147429df8125c622b19f139f29a031e4aeeffe46c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,003 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0b5-cp39-cp39-linux_armv7l.whl#sha256=265f76630d30cd17eff4c3ec815f806705c85ae8128470bbc86f80728eca0577 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,004 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0b5-cp39-cp39-linux_armv6l.whl#sha256=265f76630d30cd17eff4c3ec815f806705c85ae8128470bbc86f80728eca0577 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,004 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0b5-cp37-cp37m-linux_armv7l.whl#sha256=e58d94fe97bced92cd8183a94b3ec32d3361426501e12211218f73838032bd40 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,005 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0b5-cp37-cp37m-linux_armv6l.whl#sha256=e58d94fe97bced92cd8183a94b3ec32d3361426501e12211218f73838032bd40 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,005 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0.dev1-cp39-cp39-linux_armv7l.whl#sha256=500629fe8f8e482464e9a60bc5b36d637ee23f35951b8f1ee229a452d0510a57 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,006 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0.dev1-cp39-cp39-linux_armv6l.whl#sha256=500629fe8f8e482464e9a60bc5b36d637ee23f35951b8f1ee229a452d0510a57 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,006 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0.dev1-cp37-cp37m-linux_armv7l.whl#sha256=2f29fa867961beab5862b4d3331b574743a7502341a3e6204756f9dce4374fd6 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,007 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0.dev1-cp37-cp37m-linux_armv6l.whl#sha256=2f29fa867961beab5862b4d3331b574743a7502341a3e6204756f9dce4374fd6 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2023-09-14T17:50:44,007 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.3-cp39-cp39-linux_armv7l.whl#sha256=ab08db8aa33ca1961dfe69ed87059da32ce65f1aa29d6bb022b7cab651f39766 (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,008 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.3-cp39-cp39-linux_armv6l.whl#sha256=ab08db8aa33ca1961dfe69ed87059da32ce65f1aa29d6bb022b7cab651f39766 (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,009 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.3-cp37-cp37m-linux_armv7l.whl#sha256=46ad4b8e3a72b7f3f633d7068c61ff09c546afaf7391cdadf507e4757283abe5 (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,009 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.3-cp37-cp37m-linux_armv6l.whl#sha256=46ad4b8e3a72b7f3f633d7068c61ff09c546afaf7391cdadf507e4757283abe5 (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,010 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.3-cp35-cp35m-linux_armv6l.whl#sha256=2d56e31ec6b4eb41aa74e6d9651effcd50d495f9344506d52c76dc17b3d8c273 (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,010 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.3-cp35-cp35m-linux_armv7l.whl#sha256=2d56e31ec6b4eb41aa74e6d9651effcd50d495f9344506d52c76dc17b3d8c273 (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,011 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp39-cp39-linux_armv7l.whl#sha256=8509f9b39ad64419d29b6f438ddb27216474513474b4f93982348610125b3bb8 (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,011 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp39-cp39-linux_armv6l.whl#sha256=8509f9b39ad64419d29b6f438ddb27216474513474b4f93982348610125b3bb8 (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,012 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp35-cp35m-linux_armv7l.whl#sha256=94be102c7e48aae37ae6d7e184182204193924634440f5439edddba2a23108db (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,012 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp35-cp35m-linux_armv6l.whl#sha256=94be102c7e48aae37ae6d7e184182204193924634440f5439edddba2a23108db (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,013 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=dee88fa69865b2bb166916e14cd5902f71b995e802ced263858b6d74197941fe (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,013 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=dee88fa69865b2bb166916e14cd5902f71b995e802ced263858b6d74197941fe (from https://www.piwheels.org/simple/westpa/) 2023-09-14T17:50:44,014 Skipping link: not a file: https://www.piwheels.org/simple/westpa/ 2023-09-14T17:50:44,014 Skipping link: not a file: https://pypi.org/simple/westpa/ 2023-09-14T17:50:44,034 Given no hashes to check 1 links for project 'westpa': discarding no candidates 2023-09-14T17:50:44,051 Collecting westpa==2.0b5 2023-09-14T17:50:44,054 Created temporary directory: /tmp/pip-unpack-pbd2_q26 2023-09-14T17:50:44,709 Downloading westpa-2.0b5.tar.gz (1.1 MB) 2023-09-14T17:50:45,579 Added westpa==2.0b5 from https://files.pythonhosted.org/packages/fe/e9/e9ef53a71a73dfe76a8875a8eb2ce1c16942a7878502270922c5fdc8016f/westpa-2.0b5.tar.gz to build tracker '/tmp/pip-build-tracker-15ggm6_6' 2023-09-14T17:50:45,592 Created temporary directory: /tmp/pip-build-env-0onpqun0 2023-09-14T17:50:45,599 Installing build dependencies: started 2023-09-14T17:50:45,600 Running command pip subprocess to install build dependencies 2023-09-14T17:50:46,761 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-14T17:50:47,277 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-14T17:50:50,209 Collecting setuptools>=40.8.0 2023-09-14T17:50:50,210 Obtaining dependency information for setuptools>=40.8.0 from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-14T17:50:50,216 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-14T17:50:50,419 Collecting wheel 2023-09-14T17:50:50,436 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-14T17:50:51,821 Collecting Cython>=0.29.16 2023-09-14T17:50:51,823 Obtaining dependency information for Cython>=0.29.16 from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata 2023-09-14T17:50:51,828 Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-14T17:50:51,957 Collecting oldest-supported-numpy 2023-09-14T17:50:51,980 Using cached https://www.piwheels.org/simple/oldest-supported-numpy/oldest_supported_numpy-2023.8.3-py3-none-any.whl (4.8 kB) 2023-09-14T17:50:52,354 Link requires a different Python (3.11.2 not in: '>=3.7,<3.10'): https://files.pythonhosted.org/packages/99/f1/c00d6be56e1a718a3068079e3ec8ce044d7179345280f6a3f5066068af0d/scipy-1.6.2.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.10) 2023-09-14T17:50:52,359 Link requires a different Python (3.11.2 not in: '>=3.7,<3.10'): https://files.pythonhosted.org/packages/fe/fd/8704c7b7b34cdac850485e638346025ca57c5a859934b9aa1be5399b33b7/scipy-1.6.3.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.10) 2023-09-14T17:50:52,364 Link requires a different Python (3.11.2 not in: '>=3.7,<3.10'): https://files.pythonhosted.org/packages/bb/bb/944f559d554df6c9adf037aa9fc982a9706ee0e96c0d5beac701cb158900/scipy-1.7.0.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.10) 2023-09-14T17:50:52,369 Link requires a different Python (3.11.2 not in: '>=3.7,<3.10'): https://files.pythonhosted.org/packages/47/33/a24aec22b7be7fdb10ec117a95e1e4099890d8bbc6646902f443fc7719d1/scipy-1.7.1.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.10) 2023-09-14T17:50:52,375 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/0e/23/58c4f995475a2a97cb5f4a032aedaf881ad87cd976a7180c55118d105a1d/scipy-1.7.2.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.11) 2023-09-14T17:50:52,382 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/61/67/1a654b96309c991762ee9bc39c363fc618076b155fe52d295211cf2536c7/scipy-1.7.3.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.7,<3.11) 2023-09-14T17:50:52,388 Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/c0/ad/e3c052ed4e0027a8abef0a5e8441a044427d252d17d9aee06d56e62fc698/scipy-1.8.0rc1.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11) 2023-09-14T17:50:52,394 Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/29/d2/151a54944b333e465f98804dced31dab1284f3c37b752b9cefa710b64681/scipy-1.8.0rc2.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11) 2023-09-14T17:50:52,400 Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/e4/26/83dd1c6378513a6241d984bda9f08c512b6e35fff13fba3acc1b3c195f02/scipy-1.8.0rc3.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11) 2023-09-14T17:50:52,405 Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/22/78/056cc43e7737811b6f50886788a940f852773dd9804f5365952805db9648/scipy-1.8.0rc4.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11) 2023-09-14T17:50:52,411 Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/b4/a2/4faa34bf0cdbefd5c706625f1234987795f368eb4e97bde9d6f46860843e/scipy-1.8.0.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11) 2023-09-14T17:50:52,417 Link requires a different Python (3.11.2 not in: '>=3.8,<3.11'): https://files.pythonhosted.org/packages/26/b5/9330f004b9a3b2b6a31f59f46f1617ce9ca15c0e7fe64288c20385a05c9d/scipy-1.8.1.tar.gz (from https://pypi.org/simple/scipy/) (requires-python:>=3.8,<3.11) 2023-09-14T17:50:52,615 Collecting scipy>=0.19.1 2023-09-14T17:50:56,965 Using cached https://www.piwheels.org/simple/scipy/scipy-1.11.2-cp311-cp311-linux_armv7l.whl (65.1 MB) 2023-09-14T17:50:59,330 Collecting versioneer-518 2023-09-14T17:50:59,391 Using cached https://www.piwheels.org/simple/versioneer-518/versioneer_518-0.19-py2.py3-none-any.whl (17 kB) 2023-09-14T17:51:00,453 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-14T17:51:00,461 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-14T17:51:00,468 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-14T17:51:00,476 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-14T17:51:00,483 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-14T17:51:00,898 Collecting numpy==1.23.2 (from oldest-supported-numpy) 2023-09-14T17:51:00,899 Using cached numpy-1.23.2-cp311-cp311-linux_armv7l.whl 2023-09-14T17:51:01,073 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-14T17:51:01,139 Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB) 2023-09-14T17:51:03,786 Installing collected packages: versioneer-518, wheel, setuptools, numpy, Cython, scipy, oldest-supported-numpy 2023-09-14T17:51:04,065 Creating /tmp/pip-build-env-0onpqun0/overlay/local/bin 2023-09-14T17:51:04,067 changing mode of /tmp/pip-build-env-0onpqun0/overlay/local/bin/wheel to 755 2023-09-14T17:51:15,531 changing mode of /tmp/pip-build-env-0onpqun0/overlay/local/bin/f2py to 755 2023-09-14T17:51:15,533 changing mode of /tmp/pip-build-env-0onpqun0/overlay/local/bin/f2py3 to 755 2023-09-14T17:51:15,535 changing mode of /tmp/pip-build-env-0onpqun0/overlay/local/bin/f2py3.11 to 755 2023-09-14T17:51:18,280 changing mode of /tmp/pip-build-env-0onpqun0/overlay/local/bin/cygdb to 755 2023-09-14T17:51:18,282 changing mode of /tmp/pip-build-env-0onpqun0/overlay/local/bin/cython to 755 2023-09-14T17:51:18,285 changing mode of /tmp/pip-build-env-0onpqun0/overlay/local/bin/cythonize to 755 2023-09-14T17:51:31,762 Successfully installed Cython-3.0.2 numpy-1.23.2 oldest-supported-numpy-2023.8.3 scipy-1.11.2 setuptools-68.2.2 versioneer-518-0.19 wheel-0.41.2 2023-09-14T17:51:32,489 Installing build dependencies: finished with status 'done' 2023-09-14T17:51:32,492 Getting requirements to build wheel: started 2023-09-14T17:51:32,493 Running command Getting requirements to build wheel 2023-09-14T17:51:54,238 warning: src/westpa/core/reweight/_reweight.pyx:351:13: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2023-09-14T17:51:54,239 warning: src/westpa/core/reweight/_reweight.pyx:351:21: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2023-09-14T17:51:54,240 warning: src/westpa/core/reweight/_reweight.pyx:351:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2023-09-14T17:51:54,241 warning: src/westpa/core/reweight/_reweight.pyx:352:15: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2023-09-14T17:51:54,241 warning: src/westpa/core/reweight/_reweight.pyx:352:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2023-09-14T17:51:54,242 warning: src/westpa/core/reweight/_reweight.pyx:352:35: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2023-09-14T17:51:54,242 warning: src/westpa/core/reweight/_reweight.pyx:352:46: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2023-09-14T17:51:54,243 warning: src/westpa/core/reweight/_reweight.pyx:352:54: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2023-09-14T17:52:08,511 Compiling src/westpa/fasthist/_fasthist.pyx because it changed. 2023-09-14T17:52:08,511 Compiling src/westpa/trajtree/_trajtree.pyx because it changed. 2023-09-14T17:52:08,512 Compiling src/westpa/mclib/_mclib.pyx because it changed. 2023-09-14T17:52:08,513 Compiling src/westpa/core/binning/_assign.pyx because it changed. 2023-09-14T17:52:08,513 Compiling src/westpa/core/kinetics/_kinetics.pyx because it changed. 2023-09-14T17:52:08,514 Compiling src/westpa/core/reweight/_reweight.pyx because it changed. 2023-09-14T17:52:08,514 [1/6] Cythonizing src/westpa/core/binning/_assign.pyx 2023-09-14T17:52:08,514 [2/6] Cythonizing src/westpa/core/kinetics/_kinetics.pyx 2023-09-14T17:52:08,515 [3/6] Cythonizing src/westpa/core/reweight/_reweight.pyx 2023-09-14T17:52:08,515 [4/6] Cythonizing src/westpa/fasthist/_fasthist.pyx 2023-09-14T17:52:08,516 [5/6] Cythonizing src/westpa/mclib/_mclib.pyx 2023-09-14T17:52:08,516 [6/6] Cythonizing src/westpa/trajtree/_trajtree.pyx 2023-09-14T17:52:08,610 running egg_info 2023-09-14T17:52:08,616 writing src/westpa.egg-info/PKG-INFO 2023-09-14T17:52:08,623 writing dependency_links to src/westpa.egg-info/dependency_links.txt 2023-09-14T17:52:08,626 writing entry points to src/westpa.egg-info/entry_points.txt 2023-09-14T17:52:08,629 writing requirements to src/westpa.egg-info/requires.txt 2023-09-14T17:52:08,631 writing top-level names to src/westpa.egg-info/top_level.txt 2023-09-14T17:52:08,689 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,690 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,690 dependency 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be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,693 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,694 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,694 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,694 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,695 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,695 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,696 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,696 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,697 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,697 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,698 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,698 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,699 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,699 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,700 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,700 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,701 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,701 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,702 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,702 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,703 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,703 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,703 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:08,704 reading manifest file 'src/westpa.egg-info/SOURCES.txt' 2023-09-14T17:52:08,709 reading manifest template 'MANIFEST.in' 2023-09-14T17:52:08,735 adding license file 'LICENSE' 2023-09-14T17:52:08,736 adding license file 'AUTHORS' 2023-09-14T17:52:08,743 writing manifest file 'src/westpa.egg-info/SOURCES.txt' 2023-09-14T17:52:09,280 Getting requirements to build wheel: finished with status 'done' 2023-09-14T17:52:09,290 Created temporary directory: /tmp/pip-modern-metadata-wg4350m9 2023-09-14T17:52:09,292 Preparing metadata (pyproject.toml): started 2023-09-14T17:52:09,293 Running command Preparing metadata (pyproject.toml) 2023-09-14T17:52:11,034 running dist_info 2023-09-14T17:52:11,048 creating /tmp/pip-modern-metadata-wg4350m9/westpa.egg-info 2023-09-14T17:52:11,054 writing /tmp/pip-modern-metadata-wg4350m9/westpa.egg-info/PKG-INFO 2023-09-14T17:52:11,062 writing dependency_links to /tmp/pip-modern-metadata-wg4350m9/westpa.egg-info/dependency_links.txt 2023-09-14T17:52:11,064 writing entry points to /tmp/pip-modern-metadata-wg4350m9/westpa.egg-info/entry_points.txt 2023-09-14T17:52:11,068 writing requirements to /tmp/pip-modern-metadata-wg4350m9/westpa.egg-info/requires.txt 2023-09-14T17:52:11,069 writing top-level names to /tmp/pip-modern-metadata-wg4350m9/westpa.egg-info/top_level.txt 2023-09-14T17:52:11,071 writing manifest file '/tmp/pip-modern-metadata-wg4350m9/westpa.egg-info/SOURCES.txt' 2023-09-14T17:52:11,108 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,109 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,109 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,110 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,111 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,111 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,112 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,112 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,113 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,114 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,114 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,114 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,115 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,115 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,116 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,116 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,117 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,117 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,118 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,118 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,119 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,119 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,120 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,121 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,121 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,122 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,122 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,123 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,123 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,123 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:52:11,124 reading manifest file '/tmp/pip-modern-metadata-wg4350m9/westpa.egg-info/SOURCES.txt' 2023-09-14T17:52:11,124 reading manifest template 'MANIFEST.in' 2023-09-14T17:52:11,146 adding license file 'LICENSE' 2023-09-14T17:52:11,146 adding license file 'AUTHORS' 2023-09-14T17:52:11,152 writing manifest file '/tmp/pip-modern-metadata-wg4350m9/westpa.egg-info/SOURCES.txt' 2023-09-14T17:52:11,154 creating '/tmp/pip-modern-metadata-wg4350m9/westpa-2.0b5.dist-info' 2023-09-14T17:52:11,402 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-14T17:52:11,407 Source in /tmp/pip-wheel-196mz4e4/westpa_054b79a9f6f142aa8d84a65fef5c81d6 has version 2.0b5, which satisfies requirement westpa==2.0b5 from https://files.pythonhosted.org/packages/fe/e9/e9ef53a71a73dfe76a8875a8eb2ce1c16942a7878502270922c5fdc8016f/westpa-2.0b5.tar.gz 2023-09-14T17:52:11,408 Removed westpa==2.0b5 from https://files.pythonhosted.org/packages/fe/e9/e9ef53a71a73dfe76a8875a8eb2ce1c16942a7878502270922c5fdc8016f/westpa-2.0b5.tar.gz from build tracker '/tmp/pip-build-tracker-15ggm6_6' 2023-09-14T17:52:11,413 WARNING: The candidate selected for download or install is a yanked version: 'westpa' candidate (version 2.0b5 at https://files.pythonhosted.org/packages/fe/e9/e9ef53a71a73dfe76a8875a8eb2ce1c16942a7878502270922c5fdc8016f/westpa-2.0b5.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6)) 2023-09-14T17:52:11,413 Reason for being yanked: Old version. Use 2.0dev1 instead. 2023-09-14T17:52:11,415 Created temporary directory: /tmp/pip-unpack-je77r3bc 2023-09-14T17:52:11,416 Created temporary directory: /tmp/pip-unpack-4mcl64w1 2023-09-14T17:52:11,458 Building wheels for collected packages: westpa 2023-09-14T17:52:11,463 Created temporary directory: /tmp/pip-wheel-pfmta5kf 2023-09-14T17:52:11,464 Destination directory: /tmp/pip-wheel-pfmta5kf 2023-09-14T17:52:11,466 Building wheel for westpa (pyproject.toml): started 2023-09-14T17:52:11,467 Running command Building wheel for westpa (pyproject.toml) 2023-09-14T17:52:13,129 running bdist_wheel 2023-09-14T17:52:13,173 running build 2023-09-14T17:52:13,173 running build_py 2023-09-14T17:52:13,178 creating build 2023-09-14T17:52:13,178 creating build/lib.linux-armv7l-cpython-311 2023-09-14T17:52:13,179 creating build/lib.linux-armv7l-cpython-311/westpa 2023-09-14T17:52:13,180 copying src/westpa/_version.py -> build/lib.linux-armv7l-cpython-311/westpa 2023-09-14T17:52:13,183 copying src/westpa/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa 2023-09-14T17:52:13,185 creating build/lib.linux-armv7l-cpython-311/westpa/cli 2023-09-14T17:52:13,187 copying src/westpa/cli/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/cli 2023-09-14T17:52:13,189 creating build/lib.linux-armv7l-cpython-311/westpa/trajtree 2023-09-14T17:52:13,191 copying src/westpa/trajtree/trajtree.py -> build/lib.linux-armv7l-cpython-311/westpa/trajtree 2023-09-14T17:52:13,194 copying src/westpa/trajtree/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/trajtree 2023-09-14T17:52:13,197 creating build/lib.linux-armv7l-cpython-311/westpa/analysis 2023-09-14T17:52:13,198 copying src/westpa/analysis/loaders.py -> build/lib.linux-armv7l-cpython-311/westpa/analysis 2023-09-14T17:52:13,200 copying src/westpa/analysis/core.py -> build/lib.linux-armv7l-cpython-311/westpa/analysis 2023-09-14T17:52:13,203 copying src/westpa/analysis/trajectories.py -> build/lib.linux-armv7l-cpython-311/westpa/analysis 2023-09-14T17:52:13,206 copying src/westpa/analysis/statistics.py -> build/lib.linux-armv7l-cpython-311/westpa/analysis 2023-09-14T17:52:13,208 copying src/westpa/analysis/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/analysis 2023-09-14T17:52:13,211 creating build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,212 copying src/westpa/tools/data_reader.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,215 copying src/westpa/tools/core.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,217 copying src/westpa/tools/selected_segs.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,220 copying src/westpa/tools/dtypes.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,222 copying src/westpa/tools/binning.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,225 copying src/westpa/tools/iter_range.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,227 copying src/westpa/tools/wipi.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,230 copying src/westpa/tools/kinetics_tool.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,233 copying src/westpa/tools/progress.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,235 copying src/westpa/tools/plot.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,237 copying src/westpa/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/tools 2023-09-14T17:52:13,240 creating build/lib.linux-armv7l-cpython-311/westpa/fasthist 2023-09-14T17:52:13,241 copying src/westpa/fasthist/__main__.py -> build/lib.linux-armv7l-cpython-311/westpa/fasthist 2023-09-14T17:52:13,243 copying src/westpa/fasthist/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/fasthist 2023-09-14T17:52:13,245 creating build/lib.linux-armv7l-cpython-311/westpa/oldtools 2023-09-14T17:52:13,247 copying src/westpa/oldtools/files.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools 2023-09-14T17:52:13,249 copying src/westpa/oldtools/miscfn.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools 2023-09-14T17:52:13,251 copying src/westpa/oldtools/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools 2023-09-14T17:52:13,254 creating build/lib.linux-armv7l-cpython-311/westpa/westext 2023-09-14T17:52:13,256 copying src/westpa/westext/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/westext 2023-09-14T17:52:13,259 creating build/lib.linux-armv7l-cpython-311/westpa/work_managers 2023-09-14T17:52:13,260 copying src/westpa/work_managers/core.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers 2023-09-14T17:52:13,263 copying src/westpa/work_managers/mpi.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers 2023-09-14T17:52:13,266 copying src/westpa/work_managers/threads.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers 2023-09-14T17:52:13,268 copying src/westpa/work_managers/environment.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers 2023-09-14T17:52:13,271 copying src/westpa/work_managers/serial.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers 2023-09-14T17:52:13,273 copying src/westpa/work_managers/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers 2023-09-14T17:52:13,275 copying src/westpa/work_managers/processes.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers 2023-09-14T17:52:13,279 creating build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,280 copying src/westpa/core/_rc.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,283 copying src/westpa/core/systems.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,285 copying src/westpa/core/data_manager.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,289 copying src/westpa/core/sim_manager.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,292 copying src/westpa/core/extloader.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,295 copying src/westpa/core/h5io.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,298 copying src/westpa/core/we_driver.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,301 copying src/westpa/core/segment.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,304 copying src/westpa/core/progress.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,307 copying src/westpa/core/yamlcfg.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,310 copying src/westpa/core/wm_ops.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,312 copying src/westpa/core/states.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,314 copying src/westpa/core/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,316 copying src/westpa/core/textio.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,319 copying src/westpa/core/trajectory.py -> build/lib.linux-armv7l-cpython-311/westpa/core 2023-09-14T17:52:13,322 creating build/lib.linux-armv7l-cpython-311/westpa/mclib 2023-09-14T17:52:13,323 copying src/westpa/mclib/__main__.py -> build/lib.linux-armv7l-cpython-311/westpa/mclib 2023-09-14T17:52:13,326 copying src/westpa/mclib/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/mclib 2023-09-14T17:52:13,330 creating build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,331 copying src/westpa/cli/tools/w_ipa.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,335 copying src/westpa/cli/tools/w_direct.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,337 copying src/westpa/cli/tools/w_crawl.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,340 copying src/westpa/cli/tools/w_trace.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,343 copying src/westpa/cli/tools/w_bins.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,346 copying src/westpa/cli/tools/w_kinetics.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,349 copying src/westpa/cli/tools/w_kinavg.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,351 copying src/westpa/cli/tools/w_postanalysis_reweight.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,354 copying src/westpa/cli/tools/w_postanalysis_matrix.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,356 copying src/westpa/cli/tools/plothist.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,359 copying src/westpa/cli/tools/w_multi_west.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,361 copying src/westpa/cli/tools/w_fluxanl.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,364 copying src/westpa/cli/tools/w_stateprobs.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,366 copying src/westpa/cli/tools/w_ntop.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,369 copying src/westpa/cli/tools/ploterr.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,372 copying src/westpa/cli/tools/w_dumpsegs.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,375 copying src/westpa/cli/tools/w_select.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,377 copying src/westpa/cli/tools/w_reweight.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,380 copying src/westpa/cli/tools/w_eddist.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,383 copying src/westpa/cli/tools/w_pdist.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,386 copying src/westpa/cli/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,388 copying src/westpa/cli/tools/w_assign.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/tools 2023-09-14T17:52:13,392 creating build/lib.linux-armv7l-cpython-311/westpa/cli/core 2023-09-14T17:52:13,393 copying src/westpa/cli/core/w_fork.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/core 2023-09-14T17:52:13,396 copying src/westpa/cli/core/w_states.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/core 2023-09-14T17:52:13,398 copying src/westpa/cli/core/w_run.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/core 2023-09-14T17:52:13,401 copying src/westpa/cli/core/w_truncate.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/core 2023-09-14T17:52:13,403 copying src/westpa/cli/core/w_succ.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/core 2023-09-14T17:52:13,405 copying src/westpa/cli/core/w_init.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/core 2023-09-14T17:52:13,407 copying src/westpa/cli/core/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/cli/core 2023-09-14T17:52:13,409 creating build/lib.linux-armv7l-cpython-311/westpa/oldtools/cmds 2023-09-14T17:52:13,411 copying src/westpa/oldtools/cmds/w_ttimes.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/cmds 2023-09-14T17:52:13,413 copying src/westpa/oldtools/cmds/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/cmds 2023-09-14T17:52:13,416 creating build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,417 copying src/westpa/oldtools/aframe/data_reader.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,419 copying src/westpa/oldtools/aframe/atool.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,421 copying src/westpa/oldtools/aframe/base_mixin.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,423 copying src/westpa/oldtools/aframe/transitions.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,426 copying src/westpa/oldtools/aframe/plotting.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,427 copying src/westpa/oldtools/aframe/binning.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,430 copying src/westpa/oldtools/aframe/iter_range.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,432 copying src/westpa/oldtools/aframe/trajwalker.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,435 copying src/westpa/oldtools/aframe/mcbs.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,437 copying src/westpa/oldtools/aframe/output.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,440 copying src/westpa/oldtools/aframe/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,442 copying src/westpa/oldtools/aframe/kinetics.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe 2023-09-14T17:52:13,445 creating build/lib.linux-armv7l-cpython-311/westpa/oldtools/stats 2023-09-14T17:52:13,446 copying src/westpa/oldtools/stats/accumulator.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/stats 2023-09-14T17:52:13,449 copying src/westpa/oldtools/stats/edfs.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/stats 2023-09-14T17:52:13,451 copying src/westpa/oldtools/stats/mcbs.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/stats 2023-09-14T17:52:13,453 copying src/westpa/oldtools/stats/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/oldtools/stats 2023-09-14T17:52:13,455 creating build/lib.linux-armv7l-cpython-311/westpa/westext/stringmethod 2023-09-14T17:52:13,456 copying src/westpa/westext/stringmethod/string_method.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/stringmethod 2023-09-14T17:52:13,459 copying src/westpa/westext/stringmethod/fourier_fitting.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/stringmethod 2023-09-14T17:52:13,461 copying src/westpa/westext/stringmethod/string_driver.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/stringmethod 2023-09-14T17:52:13,464 copying src/westpa/westext/stringmethod/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/stringmethod 2023-09-14T17:52:13,466 creating build/lib.linux-armv7l-cpython-311/westpa/westext/weed 2023-09-14T17:52:13,467 copying src/westpa/westext/weed/UncertMath.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/weed 2023-09-14T17:52:13,470 copying src/westpa/westext/weed/weed_driver.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/weed 2023-09-14T17:52:13,473 copying src/westpa/westext/weed/ProbAdjustEquil.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/weed 2023-09-14T17:52:13,476 copying src/westpa/westext/weed/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/weed 2023-09-14T17:52:13,478 copying src/westpa/westext/weed/BinCluster.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/weed 2023-09-14T17:52:13,481 creating build/lib.linux-armv7l-cpython-311/westpa/westext/adaptvoronoi 2023-09-14T17:52:13,482 copying src/westpa/westext/adaptvoronoi/adaptVor_driver.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/adaptvoronoi 2023-09-14T17:52:13,485 copying src/westpa/westext/adaptvoronoi/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/adaptvoronoi 2023-09-14T17:52:13,487 creating build/lib.linux-armv7l-cpython-311/westpa/westext/wess 2023-09-14T17:52:13,488 copying src/westpa/westext/wess/wess_driver.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/wess 2023-09-14T17:52:13,491 copying src/westpa/westext/wess/ProbAdjust.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/wess 2023-09-14T17:52:13,493 copying src/westpa/westext/wess/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/westext/wess 2023-09-14T17:52:13,496 creating build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq 2023-09-14T17:52:13,497 copying src/westpa/work_managers/zeromq/core.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq 2023-09-14T17:52:13,500 copying src/westpa/work_managers/zeromq/work_manager.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq 2023-09-14T17:52:13,502 copying src/westpa/work_managers/zeromq/worker.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq 2023-09-14T17:52:13,505 copying src/westpa/work_managers/zeromq/node.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq 2023-09-14T17:52:13,508 copying src/westpa/work_managers/zeromq/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq 2023-09-14T17:52:13,510 creating build/lib.linux-armv7l-cpython-311/westpa/core/reweight 2023-09-14T17:52:13,511 copying src/westpa/core/reweight/matrix.py -> build/lib.linux-armv7l-cpython-311/westpa/core/reweight 2023-09-14T17:52:13,514 copying src/westpa/core/reweight/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/core/reweight 2023-09-14T17:52:13,517 creating build/lib.linux-armv7l-cpython-311/westpa/core/binning 2023-09-14T17:52:13,522 copying src/westpa/core/binning/bins.py -> build/lib.linux-armv7l-cpython-311/westpa/core/binning 2023-09-14T17:52:13,524 copying src/westpa/core/binning/assign.py -> build/lib.linux-armv7l-cpython-311/westpa/core/binning 2023-09-14T17:52:13,527 copying src/westpa/core/binning/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/core/binning 2023-09-14T17:52:13,529 creating build/lib.linux-armv7l-cpython-311/westpa/core/kinetics 2023-09-14T17:52:13,530 copying src/westpa/core/kinetics/matrates.py -> build/lib.linux-armv7l-cpython-311/westpa/core/kinetics 2023-09-14T17:52:13,532 copying src/westpa/core/kinetics/rate_averaging.py -> build/lib.linux-armv7l-cpython-311/westpa/core/kinetics 2023-09-14T17:52:13,534 copying src/westpa/core/kinetics/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/core/kinetics 2023-09-14T17:52:13,536 copying src/westpa/core/kinetics/events.py -> build/lib.linux-armv7l-cpython-311/westpa/core/kinetics 2023-09-14T17:52:13,539 creating build/lib.linux-armv7l-cpython-311/westpa/core/propagators 2023-09-14T17:52:13,540 copying src/westpa/core/propagators/executable.py -> build/lib.linux-armv7l-cpython-311/westpa/core/propagators 2023-09-14T17:52:13,542 copying src/westpa/core/propagators/__init__.py -> build/lib.linux-armv7l-cpython-311/westpa/core/propagators 2023-09-14T17:52:13,558 UPDATING build/lib.linux-armv7l-cpython-311/westpa/_version.py 2023-09-14T17:52:13,559 set build/lib.linux-armv7l-cpython-311/westpa/_version.py to '2.0b5' 2023-09-14T17:52:13,559 running build_ext 2023-09-14T17:52:13,565 building 'westpa.fasthist._fasthist' extension 2023-09-14T17:52:13,565 creating build/temp.linux-armv7l-cpython-311 2023-09-14T17:52:13,566 creating build/temp.linux-armv7l-cpython-311/src 2023-09-14T17:52:13,566 creating build/temp.linux-armv7l-cpython-311/src/westpa 2023-09-14T17:52:13,567 creating build/temp.linux-armv7l-cpython-311/src/westpa/fasthist 2023-09-14T17:52:13,568 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/westpa/fasthist/_fasthist.c -o build/temp.linux-armv7l-cpython-311/src/westpa/fasthist/_fasthist.o -O3 2023-09-14T17:52:13,961 In file included from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-14T17:52:13,962 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-14T17:52:13,962 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-14T17:52:13,963 from src/westpa/fasthist/_fasthist.c:1179: 2023-09-14T17:52:13,963 /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-14T17:52:13,964 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-14T17:52:13,964 | ^~~~~~~ 2023-09-14T17:52:50,716 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/westpa/fasthist/_fasthist.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/westpa/fasthist/_fasthist.cpython-311-arm-linux-gnueabihf.so 2023-09-14T17:52:50,869 building 'westpa.trajtree._trajtree' extension 2023-09-14T17:52:50,869 creating build/temp.linux-armv7l-cpython-311/src/westpa/trajtree 2023-09-14T17:52:50,870 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/westpa/trajtree/_trajtree.c -o build/temp.linux-armv7l-cpython-311/src/westpa/trajtree/_trajtree.o -O3 2023-09-14T17:52:51,261 In file included from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-14T17:52:51,262 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-14T17:52:51,262 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-14T17:52:51,263 from src/westpa/trajtree/_trajtree.c:1179: 2023-09-14T17:52:51,263 /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-14T17:52:51,264 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-14T17:52:51,265 | ^~~~~~~ 2023-09-14T17:52:51,415 src/westpa/trajtree/_trajtree.c: In function ‘__pyx_f_6westpa_8trajtree_9_trajtree_14_trajtree_base__build_table’: 2023-09-14T17:52:51,420 src/westpa/trajtree/_trajtree.c:5898:35: warning: comparison of integer expressions of different signedness: ‘__pyx_t_5numpy_uint64_t’ {aka ‘long long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2023-09-14T17:52:51,421 5898 | for (__pyx_t_22 = 0; __pyx_t_22 < __pyx_t_27; __pyx_t_22+=1) { 2023-09-14T17:52:51,421 | ^ 2023-09-14T17:52:51,446 src/westpa/trajtree/_trajtree.c: In function ‘__pyx_f_6westpa_8trajtree_9_trajtree_14_trajtree_base_count_roots’: 2023-09-14T17:52:51,452 src/westpa/trajtree/_trajtree.c:6356:33: warning: comparison of integer expressions of different signedness: ‘__pyx_t_5numpy_uint64_t’ {aka ‘long long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2023-09-14T17:52:51,452 6356 | for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_8; __pyx_t_6+=1) { 2023-09-14T17:52:51,453 | ^ 2023-09-14T17:52:51,463 src/westpa/trajtree/_trajtree.c: In function ‘__pyx_f_6westpa_8trajtree_9_trajtree_14_trajtree_base_count_leaves’: 2023-09-14T17:52:51,469 src/westpa/trajtree/_trajtree.c:6656:33: warning: comparison of integer expressions of different signedness: ‘__pyx_t_5numpy_uint64_t’ {aka ‘long long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2023-09-14T17:52:51,470 6656 | for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_8; __pyx_t_6+=1) { 2023-09-14T17:52:51,471 | ^ 2023-09-14T17:53:07,725 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/westpa/trajtree/_trajtree.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/westpa/trajtree/_trajtree.cpython-311-arm-linux-gnueabihf.so 2023-09-14T17:53:07,851 building 'westpa.mclib._mclib' extension 2023-09-14T17:53:07,852 creating build/temp.linux-armv7l-cpython-311/src/westpa/mclib 2023-09-14T17:53:07,852 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/westpa/mclib/_mclib.c -o build/temp.linux-armv7l-cpython-311/src/westpa/mclib/_mclib.o -O3 2023-09-14T17:53:08,240 In file included from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-14T17:53:08,241 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-14T17:53:08,241 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-14T17:53:08,242 from src/westpa/mclib/_mclib.c:1179: 2023-09-14T17:53:08,243 /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-14T17:53:08,243 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-14T17:53:08,244 | ^~~~~~~ 2023-09-14T17:53:45,665 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/westpa/mclib/_mclib.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/westpa/mclib/_mclib.cpython-311-arm-linux-gnueabihf.so 2023-09-14T17:53:45,812 building 'westpa.core.binning._assign' extension 2023-09-14T17:53:45,812 creating build/temp.linux-armv7l-cpython-311/src/westpa/core 2023-09-14T17:53:45,813 creating build/temp.linux-armv7l-cpython-311/src/westpa/core/binning 2023-09-14T17:53:45,814 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/westpa/core/binning/_assign.c -o build/temp.linux-armv7l-cpython-311/src/westpa/core/binning/_assign.o -O3 2023-09-14T17:53:46,206 In file included from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-14T17:53:46,207 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-14T17:53:46,208 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-14T17:53:46,208 from src/westpa/core/binning/_assign.c:1179: 2023-09-14T17:53:46,209 /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-14T17:53:46,209 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-14T17:53:46,210 | ^~~~~~~ 2023-09-14T17:54:17,022 In function ‘__pyx_f_6westpa_4core_7binning_7_assign_rectilinear_assign’, 2023-09-14T17:54:17,023 inlined from ‘__pyx_pf_6westpa_4core_7binning_7_assign_rectilinear_assign’ at src/westpa/core/binning/_assign.c:20445:15, 2023-09-14T17:54:17,023 inlined from ‘__pyx_pw_6westpa_4core_7binning_7_assign_1rectilinear_assign’ at src/westpa/core/binning/_assign.c:20402:13: 2023-09-14T17:54:17,043 src/westpa/core/binning/_assign.c:20173:165: warning: ‘__pyx_v_index’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-14T17:54:17,043 20173 | *((__pyx_t_6westpa_4core_7binning_7_assign_index_t *) ( /* dim=0 */ (__pyx_v_output.data + __pyx_t_15 * __pyx_v_output.strides[0]) )) += (__pyx_v_index * __pyx_v_stridefac); 2023-09-14T17:54:17,044 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ 2023-09-14T17:54:17,045 src/westpa/core/binning/_assign.c: In function ‘__pyx_pw_6westpa_4core_7binning_7_assign_1rectilinear_assign’: 2023-09-14T17:54:17,063 src/westpa/core/binning/_assign.c:19693:51: note: ‘__pyx_v_index’ was declared here 2023-09-14T17:54:17,064 19693 | __pyx_t_6westpa_4core_7binning_7_assign_index_t __pyx_v_index; 2023-09-14T17:54:17,065 | ^~~~~~~~~~~~~ 2023-09-14T17:54:25,444 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/westpa/core/binning/_assign.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/westpa/core/binning/_assign.cpython-311-arm-linux-gnueabihf.so 2023-09-14T17:54:25,593 building 'westpa.core.kinetics._kinetics' extension 2023-09-14T17:54:25,593 creating build/temp.linux-armv7l-cpython-311/src/westpa/core/kinetics 2023-09-14T17:54:25,594 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/westpa/core/kinetics/_kinetics.c -o build/temp.linux-armv7l-cpython-311/src/westpa/core/kinetics/_kinetics.o -O3 2023-09-14T17:54:25,988 In file included from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-14T17:54:25,988 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-14T17:54:25,989 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-14T17:54:25,989 from src/westpa/core/kinetics/_kinetics.c:1179: 2023-09-14T17:54:25,990 /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-14T17:54:25,990 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-14T17:54:25,991 | ^~~~~~~ 2023-09-14T17:55:14,836 src/westpa/core/kinetics/_kinetics.c: In function ‘__pyx_pw_6westpa_4core_8kinetics_9_kinetics_23sequence_macro_flux_to_rate’: 2023-09-14T17:55:14,838 src/westpa/core/kinetics/_kinetics.c:2443:79: warning: ‘__pyx_v_iiter’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-14T17:55:14,838 2443 | __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ 2023-09-14T17:55:14,839 | ^~ 2023-09-14T17:55:14,839 2444 | (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\ 2023-09-14T17:55:14,840 | 2023-09-14T17:55:14,862 src/westpa/core/kinetics/_kinetics.c:25373:14: note: ‘__pyx_v_iiter’ was declared here 2023-09-14T17:55:14,863 25373 | Py_ssize_t __pyx_v_iiter; 2023-09-14T17:55:14,863 | ^~~~~~~~~~~~~ 2023-09-14T17:55:17,590 In function ‘__pyx_f_6westpa_4core_8kinetics_9_kinetics_find_macrostate_transitions’, 2023-09-14T17:55:17,591 inlined from ‘__pyx_pf_6westpa_4core_8kinetics_9_kinetics_26find_macrostate_transitions’ at src/westpa/core/kinetics/_kinetics.c:28099:15, 2023-09-14T17:55:17,591 inlined from ‘__pyx_pw_6westpa_4core_8kinetics_9_kinetics_27find_macrostate_transitions’ at src/westpa/core/kinetics/_kinetics.c:28063:13: 2023-09-14T17:55:17,616 src/westpa/core/kinetics/_kinetics.c:27786:105: warning: ‘__pyx_v_tm’ may be used uninitialized [-Wmaybe-uninitialized] 2023-09-14T17:55:17,617 27786 | *((double *) ( /* dim=0 */ (__pyx_v__last_time.data + __pyx_t_8 * __pyx_v__last_time.strides[0]) )) = __pyx_v_tm; 2023-09-14T17:55:17,617 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2023-09-14T17:55:17,618 src/westpa/core/kinetics/_kinetics.c: In function ‘__pyx_pw_6westpa_4core_8kinetics_9_kinetics_27find_macrostate_transitions’: 2023-09-14T17:55:17,644 src/westpa/core/kinetics/_kinetics.c:27314:10: note: ‘__pyx_v_tm’ was declared here 2023-09-14T17:55:17,644 27314 | double __pyx_v_tm; 2023-09-14T17:55:17,645 | ^~~~~~~~~~ 2023-09-14T17:55:21,567 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/westpa/core/kinetics/_kinetics.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/westpa/core/kinetics/_kinetics.cpython-311-arm-linux-gnueabihf.so 2023-09-14T17:55:21,742 building 'westpa.core.reweight._reweight' extension 2023-09-14T17:55:21,744 creating build/temp.linux-armv7l-cpython-311/src/westpa/core/reweight 2023-09-14T17:55:21,744 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c src/westpa/core/reweight/_reweight.c -o build/temp.linux-armv7l-cpython-311/src/westpa/core/reweight/_reweight.o -O3 2023-09-14T17:55:22,133 In file included from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1948, 2023-09-14T17:55:22,133 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2023-09-14T17:55:22,134 from /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2023-09-14T17:55:22,134 from src/westpa/core/reweight/_reweight.c:1179: 2023-09-14T17:55:22,135 /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2023-09-14T17:55:22,135 17 | #warning "Using deprecated NumPy API, disable it with " \ 2023-09-14T17:55:22,136 | ^~~~~~~ 2023-09-14T17:56:07,768 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/westpa/core/reweight/_reweight.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/westpa/core/reweight/_reweight.cpython-311-arm-linux-gnueabihf.so 2023-09-14T17:56:07,932 installing to build/bdist.linux-armv7l/wheel 2023-09-14T17:56:07,933 running install 2023-09-14T17:56:07,957 running install_lib 2023-09-14T17:56:07,965 creating build/bdist.linux-armv7l 2023-09-14T17:56:07,966 creating build/bdist.linux-armv7l/wheel 2023-09-14T17:56:07,967 creating build/bdist.linux-armv7l/wheel/westpa 2023-09-14T17:56:07,969 creating build/bdist.linux-armv7l/wheel/westpa/cli 2023-09-14T17:56:07,970 creating build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,971 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_ipa.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,974 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_direct.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,977 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_crawl.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,979 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_trace.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,981 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_bins.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,984 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_kinetics.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,985 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_kinavg.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,988 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_postanalysis_reweight.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,989 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_postanalysis_matrix.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,991 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/plothist.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,994 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_multi_west.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,997 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_fluxanl.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:07,999 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_stateprobs.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,001 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_ntop.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,003 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/ploterr.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,005 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_dumpsegs.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,007 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_select.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,010 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_reweight.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,013 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_eddist.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,016 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_pdist.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,018 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,020 copying build/lib.linux-armv7l-cpython-311/westpa/cli/tools/w_assign.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2023-09-14T17:56:08,023 creating build/bdist.linux-armv7l/wheel/westpa/cli/core 2023-09-14T17:56:08,025 copying build/lib.linux-armv7l-cpython-311/westpa/cli/core/w_fork.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2023-09-14T17:56:08,027 copying build/lib.linux-armv7l-cpython-311/westpa/cli/core/w_states.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2023-09-14T17:56:08,030 copying build/lib.linux-armv7l-cpython-311/westpa/cli/core/w_run.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2023-09-14T17:56:08,032 copying build/lib.linux-armv7l-cpython-311/westpa/cli/core/w_truncate.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2023-09-14T17:56:08,034 copying build/lib.linux-armv7l-cpython-311/westpa/cli/core/w_succ.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2023-09-14T17:56:08,036 copying build/lib.linux-armv7l-cpython-311/westpa/cli/core/w_init.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2023-09-14T17:56:08,039 copying build/lib.linux-armv7l-cpython-311/westpa/cli/core/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2023-09-14T17:56:08,041 copying build/lib.linux-armv7l-cpython-311/westpa/cli/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/cli 2023-09-14T17:56:08,043 creating build/bdist.linux-armv7l/wheel/westpa/trajtree 2023-09-14T17:56:08,044 copying build/lib.linux-armv7l-cpython-311/westpa/trajtree/trajtree.py -> build/bdist.linux-armv7l/wheel/westpa/trajtree 2023-09-14T17:56:08,047 copying build/lib.linux-armv7l-cpython-311/westpa/trajtree/_trajtree.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/trajtree 2023-09-14T17:56:08,059 copying build/lib.linux-armv7l-cpython-311/westpa/trajtree/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/trajtree 2023-09-14T17:56:08,061 creating build/bdist.linux-armv7l/wheel/westpa/analysis 2023-09-14T17:56:08,062 copying build/lib.linux-armv7l-cpython-311/westpa/analysis/loaders.py -> build/bdist.linux-armv7l/wheel/westpa/analysis 2023-09-14T17:56:08,064 copying build/lib.linux-armv7l-cpython-311/westpa/analysis/core.py -> build/bdist.linux-armv7l/wheel/westpa/analysis 2023-09-14T17:56:08,066 copying build/lib.linux-armv7l-cpython-311/westpa/analysis/trajectories.py -> build/bdist.linux-armv7l/wheel/westpa/analysis 2023-09-14T17:56:08,069 copying build/lib.linux-armv7l-cpython-311/westpa/analysis/statistics.py -> build/bdist.linux-armv7l/wheel/westpa/analysis 2023-09-14T17:56:08,071 copying build/lib.linux-armv7l-cpython-311/westpa/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/analysis 2023-09-14T17:56:08,073 creating build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,074 copying build/lib.linux-armv7l-cpython-311/westpa/tools/data_reader.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,076 copying build/lib.linux-armv7l-cpython-311/westpa/tools/core.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,078 copying build/lib.linux-armv7l-cpython-311/westpa/tools/selected_segs.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,080 copying build/lib.linux-armv7l-cpython-311/westpa/tools/dtypes.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,082 copying build/lib.linux-armv7l-cpython-311/westpa/tools/binning.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,084 copying build/lib.linux-armv7l-cpython-311/westpa/tools/iter_range.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,087 copying build/lib.linux-armv7l-cpython-311/westpa/tools/wipi.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,089 copying build/lib.linux-armv7l-cpython-311/westpa/tools/kinetics_tool.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,092 copying build/lib.linux-armv7l-cpython-311/westpa/tools/progress.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,094 copying build/lib.linux-armv7l-cpython-311/westpa/tools/plot.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,096 copying build/lib.linux-armv7l-cpython-311/westpa/tools/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2023-09-14T17:56:08,098 creating build/bdist.linux-armv7l/wheel/westpa/fasthist 2023-09-14T17:56:08,099 copying build/lib.linux-armv7l-cpython-311/westpa/fasthist/__main__.py -> build/bdist.linux-armv7l/wheel/westpa/fasthist 2023-09-14T17:56:08,101 copying build/lib.linux-armv7l-cpython-311/westpa/fasthist/_fasthist.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/fasthist 2023-09-14T17:56:08,129 copying build/lib.linux-armv7l-cpython-311/westpa/fasthist/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/fasthist 2023-09-14T17:56:08,131 creating build/bdist.linux-armv7l/wheel/westpa/oldtools 2023-09-14T17:56:08,132 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/files.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools 2023-09-14T17:56:08,135 creating build/bdist.linux-armv7l/wheel/westpa/oldtools/cmds 2023-09-14T17:56:08,136 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/cmds/w_ttimes.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/cmds 2023-09-14T17:56:08,138 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/cmds/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/cmds 2023-09-14T17:56:08,140 creating build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,141 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/data_reader.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,144 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/atool.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,146 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/base_mixin.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,148 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/transitions.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,151 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/plotting.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,153 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/binning.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,155 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/iter_range.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,158 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/trajwalker.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,160 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/mcbs.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,163 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/output.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,164 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,166 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/aframe/kinetics.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2023-09-14T17:56:08,169 creating build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2023-09-14T17:56:08,170 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/stats/accumulator.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2023-09-14T17:56:08,172 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/stats/edfs.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2023-09-14T17:56:08,174 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/stats/mcbs.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2023-09-14T17:56:08,176 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/stats/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2023-09-14T17:56:08,178 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/miscfn.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools 2023-09-14T17:56:08,179 copying build/lib.linux-armv7l-cpython-311/westpa/oldtools/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools 2023-09-14T17:56:08,182 creating build/bdist.linux-armv7l/wheel/westpa/westext 2023-09-14T17:56:08,183 creating build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2023-09-14T17:56:08,184 copying build/lib.linux-armv7l-cpython-311/westpa/westext/stringmethod/string_method.py -> build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2023-09-14T17:56:08,187 copying build/lib.linux-armv7l-cpython-311/westpa/westext/stringmethod/fourier_fitting.py -> build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2023-09-14T17:56:08,189 copying build/lib.linux-armv7l-cpython-311/westpa/westext/stringmethod/string_driver.py -> build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2023-09-14T17:56:08,191 copying build/lib.linux-armv7l-cpython-311/westpa/westext/stringmethod/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2023-09-14T17:56:08,194 creating build/bdist.linux-armv7l/wheel/westpa/westext/weed 2023-09-14T17:56:08,195 copying build/lib.linux-armv7l-cpython-311/westpa/westext/weed/UncertMath.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2023-09-14T17:56:08,197 copying build/lib.linux-armv7l-cpython-311/westpa/westext/weed/weed_driver.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2023-09-14T17:56:08,199 copying build/lib.linux-armv7l-cpython-311/westpa/westext/weed/ProbAdjustEquil.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2023-09-14T17:56:08,201 copying build/lib.linux-armv7l-cpython-311/westpa/westext/weed/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2023-09-14T17:56:08,203 copying build/lib.linux-armv7l-cpython-311/westpa/westext/weed/BinCluster.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2023-09-14T17:56:08,206 creating build/bdist.linux-armv7l/wheel/westpa/westext/adaptvoronoi 2023-09-14T17:56:08,207 copying build/lib.linux-armv7l-cpython-311/westpa/westext/adaptvoronoi/adaptVor_driver.py -> build/bdist.linux-armv7l/wheel/westpa/westext/adaptvoronoi 2023-09-14T17:56:08,210 copying build/lib.linux-armv7l-cpython-311/westpa/westext/adaptvoronoi/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext/adaptvoronoi 2023-09-14T17:56:08,212 creating build/bdist.linux-armv7l/wheel/westpa/westext/wess 2023-09-14T17:56:08,213 copying build/lib.linux-armv7l-cpython-311/westpa/westext/wess/wess_driver.py -> build/bdist.linux-armv7l/wheel/westpa/westext/wess 2023-09-14T17:56:08,215 copying build/lib.linux-armv7l-cpython-311/westpa/westext/wess/ProbAdjust.py -> build/bdist.linux-armv7l/wheel/westpa/westext/wess 2023-09-14T17:56:08,217 copying build/lib.linux-armv7l-cpython-311/westpa/westext/wess/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext/wess 2023-09-14T17:56:08,219 copying build/lib.linux-armv7l-cpython-311/westpa/westext/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext 2023-09-14T17:56:08,221 creating build/bdist.linux-armv7l/wheel/westpa/work_managers 2023-09-14T17:56:08,222 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/core.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2023-09-14T17:56:08,224 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/mpi.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2023-09-14T17:56:08,227 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/threads.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2023-09-14T17:56:08,229 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/environment.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2023-09-14T17:56:08,231 creating build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2023-09-14T17:56:08,232 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq/core.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2023-09-14T17:56:08,235 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq/work_manager.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2023-09-14T17:56:08,238 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq/worker.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2023-09-14T17:56:08,241 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq/node.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2023-09-14T17:56:08,243 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/zeromq/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2023-09-14T17:56:08,245 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/serial.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2023-09-14T17:56:08,246 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2023-09-14T17:56:08,248 copying build/lib.linux-armv7l-cpython-311/westpa/work_managers/processes.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2023-09-14T17:56:08,251 creating build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,252 copying build/lib.linux-armv7l-cpython-311/westpa/core/_rc.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,255 copying build/lib.linux-armv7l-cpython-311/westpa/core/systems.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,257 copying build/lib.linux-armv7l-cpython-311/westpa/core/data_manager.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,261 copying build/lib.linux-armv7l-cpython-311/westpa/core/sim_manager.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,264 creating build/bdist.linux-armv7l/wheel/westpa/core/reweight 2023-09-14T17:56:08,265 copying build/lib.linux-armv7l-cpython-311/westpa/core/reweight/matrix.py -> build/bdist.linux-armv7l/wheel/westpa/core/reweight 2023-09-14T17:56:08,268 copying build/lib.linux-armv7l-cpython-311/westpa/core/reweight/_reweight.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/core/reweight 2023-09-14T17:56:08,293 copying build/lib.linux-armv7l-cpython-311/westpa/core/reweight/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core/reweight 2023-09-14T17:56:08,295 copying build/lib.linux-armv7l-cpython-311/westpa/core/extloader.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,298 creating build/bdist.linux-armv7l/wheel/westpa/core/binning 2023-09-14T17:56:08,298 copying build/lib.linux-armv7l-cpython-311/westpa/core/binning/bins.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2023-09-14T17:56:08,300 copying build/lib.linux-armv7l-cpython-311/westpa/core/binning/assign.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2023-09-14T17:56:08,303 copying build/lib.linux-armv7l-cpython-311/westpa/core/binning/_assign.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2023-09-14T17:56:08,327 copying build/lib.linux-armv7l-cpython-311/westpa/core/binning/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2023-09-14T17:56:08,329 copying build/lib.linux-armv7l-cpython-311/westpa/core/h5io.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,332 creating build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2023-09-14T17:56:08,333 copying build/lib.linux-armv7l-cpython-311/westpa/core/kinetics/_kinetics.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2023-09-14T17:56:08,373 copying build/lib.linux-armv7l-cpython-311/westpa/core/kinetics/matrates.py -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2023-09-14T17:56:08,375 copying build/lib.linux-armv7l-cpython-311/westpa/core/kinetics/rate_averaging.py -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2023-09-14T17:56:08,377 copying build/lib.linux-armv7l-cpython-311/westpa/core/kinetics/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2023-09-14T17:56:08,379 copying build/lib.linux-armv7l-cpython-311/westpa/core/kinetics/events.py -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2023-09-14T17:56:08,382 copying build/lib.linux-armv7l-cpython-311/westpa/core/we_driver.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,385 copying build/lib.linux-armv7l-cpython-311/westpa/core/segment.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,387 copying build/lib.linux-armv7l-cpython-311/westpa/core/progress.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,390 copying build/lib.linux-armv7l-cpython-311/westpa/core/yamlcfg.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,393 copying build/lib.linux-armv7l-cpython-311/westpa/core/wm_ops.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,395 creating build/bdist.linux-armv7l/wheel/westpa/core/propagators 2023-09-14T17:56:08,396 copying build/lib.linux-armv7l-cpython-311/westpa/core/propagators/executable.py -> build/bdist.linux-armv7l/wheel/westpa/core/propagators 2023-09-14T17:56:08,400 copying build/lib.linux-armv7l-cpython-311/westpa/core/propagators/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core/propagators 2023-09-14T17:56:08,402 copying build/lib.linux-armv7l-cpython-311/westpa/core/states.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,404 copying build/lib.linux-armv7l-cpython-311/westpa/core/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,406 copying build/lib.linux-armv7l-cpython-311/westpa/core/textio.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,409 copying build/lib.linux-armv7l-cpython-311/westpa/core/trajectory.py -> build/bdist.linux-armv7l/wheel/westpa/core 2023-09-14T17:56:08,413 creating build/bdist.linux-armv7l/wheel/westpa/mclib 2023-09-14T17:56:08,414 copying build/lib.linux-armv7l-cpython-311/westpa/mclib/__main__.py -> build/bdist.linux-armv7l/wheel/westpa/mclib 2023-09-14T17:56:08,416 copying build/lib.linux-armv7l-cpython-311/westpa/mclib/_mclib.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/mclib 2023-09-14T17:56:08,440 copying build/lib.linux-armv7l-cpython-311/westpa/mclib/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/mclib 2023-09-14T17:56:08,443 copying build/lib.linux-armv7l-cpython-311/westpa/_version.py -> build/bdist.linux-armv7l/wheel/westpa 2023-09-14T17:56:08,444 copying build/lib.linux-armv7l-cpython-311/westpa/__init__.py -> build/bdist.linux-armv7l/wheel/westpa 2023-09-14T17:56:08,446 running install_egg_info 2023-09-14T17:56:08,464 running egg_info 2023-09-14T17:56:08,472 writing src/westpa.egg-info/PKG-INFO 2023-09-14T17:56:08,481 writing dependency_links to src/westpa.egg-info/dependency_links.txt 2023-09-14T17:56:08,484 writing entry points to src/westpa.egg-info/entry_points.txt 2023-09-14T17:56:08,489 writing requirements to src/westpa.egg-info/requires.txt 2023-09-14T17:56:08,490 writing top-level names to src/westpa.egg-info/top_level.txt 2023-09-14T17:56:08,536 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,536 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,537 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,538 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,538 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,539 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,540 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,540 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,541 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,542 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,543 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,543 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,544 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,545 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,545 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,546 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,547 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,547 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,548 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,548 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,549 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,549 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,550 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,550 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,551 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,551 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,552 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,552 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,553 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,553 dependency /tmp/pip-build-env-0onpqun0/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2023-09-14T17:56:08,554 reading manifest file 'src/westpa.egg-info/SOURCES.txt' 2023-09-14T17:56:08,559 reading manifest template 'MANIFEST.in' 2023-09-14T17:56:08,627 adding license file 'LICENSE' 2023-09-14T17:56:08,628 adding license file 'AUTHORS' 2023-09-14T17:56:08,635 writing manifest file 'src/westpa.egg-info/SOURCES.txt' 2023-09-14T17:56:08,637 Copying src/westpa.egg-info to build/bdist.linux-armv7l/wheel/westpa-2.0b5-py3.11.egg-info 2023-09-14T17:56:08,651 running install_scripts 2023-09-14T17:56:08,708 creating build/bdist.linux-armv7l/wheel/westpa-2.0b5.dist-info/WHEEL 2023-09-14T17:56:08,712 creating '/tmp/pip-wheel-pfmta5kf/.tmp-6xnpzu40/westpa-2.0b5-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-09-14T17:56:08,714 adding 'westpa/__init__.py' 2023-09-14T17:56:08,716 adding 'westpa/_version.py' 2023-09-14T17:56:08,717 adding 'westpa/analysis/__init__.py' 2023-09-14T17:56:08,720 adding 'westpa/analysis/core.py' 2023-09-14T17:56:08,722 adding 'westpa/analysis/loaders.py' 2023-09-14T17:56:08,723 adding 'westpa/analysis/statistics.py' 2023-09-14T17:56:08,725 adding 'westpa/analysis/trajectories.py' 2023-09-14T17:56:08,727 adding 'westpa/cli/__init__.py' 2023-09-14T17:56:08,729 adding 'westpa/cli/core/__init__.py' 2023-09-14T17:56:08,731 adding 'westpa/cli/core/w_fork.py' 2023-09-14T17:56:08,732 adding 'westpa/cli/core/w_init.py' 2023-09-14T17:56:08,734 adding 'westpa/cli/core/w_run.py' 2023-09-14T17:56:08,736 adding 'westpa/cli/core/w_states.py' 2023-09-14T17:56:08,738 adding 'westpa/cli/core/w_succ.py' 2023-09-14T17:56:08,739 adding 'westpa/cli/core/w_truncate.py' 2023-09-14T17:56:08,741 adding 'westpa/cli/tools/__init__.py' 2023-09-14T17:56:08,744 adding 'westpa/cli/tools/ploterr.py' 2023-09-14T17:56:08,747 adding 'westpa/cli/tools/plothist.py' 2023-09-14T17:56:08,751 adding 'westpa/cli/tools/w_assign.py' 2023-09-14T17:56:08,754 adding 'westpa/cli/tools/w_bins.py' 2023-09-14T17:56:08,755 adding 'westpa/cli/tools/w_crawl.py' 2023-09-14T17:56:08,758 adding 'westpa/cli/tools/w_direct.py' 2023-09-14T17:56:08,760 adding 'westpa/cli/tools/w_dumpsegs.py' 2023-09-14T17:56:08,763 adding 'westpa/cli/tools/w_eddist.py' 2023-09-14T17:56:08,766 adding 'westpa/cli/tools/w_fluxanl.py' 2023-09-14T17:56:08,771 adding 'westpa/cli/tools/w_ipa.py' 2023-09-14T17:56:08,773 adding 'westpa/cli/tools/w_kinavg.py' 2023-09-14T17:56:08,775 adding 'westpa/cli/tools/w_kinetics.py' 2023-09-14T17:56:08,778 adding 'westpa/cli/tools/w_multi_west.py' 2023-09-14T17:56:08,780 adding 'westpa/cli/tools/w_ntop.py' 2023-09-14T17:56:08,783 adding 'westpa/cli/tools/w_pdist.py' 2023-09-14T17:56:08,785 adding 'westpa/cli/tools/w_postanalysis_matrix.py' 2023-09-14T17:56:08,787 adding 'westpa/cli/tools/w_postanalysis_reweight.py' 2023-09-14T17:56:08,791 adding 'westpa/cli/tools/w_reweight.py' 2023-09-14T17:56:08,793 adding 'westpa/cli/tools/w_select.py' 2023-09-14T17:56:08,795 adding 'westpa/cli/tools/w_stateprobs.py' 2023-09-14T17:56:08,799 adding 'westpa/cli/tools/w_trace.py' 2023-09-14T17:56:08,801 adding 'westpa/core/__init__.py' 2023-09-14T17:56:08,804 adding 'westpa/core/_rc.py' 2023-09-14T17:56:08,812 adding 'westpa/core/data_manager.py' 2023-09-14T17:56:08,815 adding 'westpa/core/extloader.py' 2023-09-14T17:56:08,819 adding 'westpa/core/h5io.py' 2023-09-14T17:56:08,821 adding 'westpa/core/progress.py' 2023-09-14T17:56:08,823 adding 'westpa/core/segment.py' 2023-09-14T17:56:08,827 adding 'westpa/core/sim_manager.py' 2023-09-14T17:56:08,830 adding 'westpa/core/states.py' 2023-09-14T17:56:08,832 adding 'westpa/core/systems.py' 2023-09-14T17:56:08,834 adding 'westpa/core/textio.py' 2023-09-14T17:56:08,836 adding 'westpa/core/trajectory.py' 2023-09-14T17:56:08,841 adding 'westpa/core/we_driver.py' 2023-09-14T17:56:08,843 adding 'westpa/core/wm_ops.py' 2023-09-14T17:56:08,846 adding 'westpa/core/yamlcfg.py' 2023-09-14T17:56:08,848 adding 'westpa/core/binning/__init__.py' 2023-09-14T17:56:09,146 adding 'westpa/core/binning/_assign.cpython-311-arm-linux-gnueabihf.so' 2023-09-14T17:56:09,160 adding 'westpa/core/binning/assign.py' 2023-09-14T17:56:09,162 adding 'westpa/core/binning/bins.py' 2023-09-14T17:56:09,164 adding 'westpa/core/kinetics/__init__.py' 2023-09-14T17:56:09,564 adding 'westpa/core/kinetics/_kinetics.cpython-311-arm-linux-gnueabihf.so' 2023-09-14T17:56:09,582 adding 'westpa/core/kinetics/events.py' 2023-09-14T17:56:09,584 adding 'westpa/core/kinetics/matrates.py' 2023-09-14T17:56:09,587 adding 'westpa/core/kinetics/rate_averaging.py' 2023-09-14T17:56:09,589 adding 'westpa/core/propagators/__init__.py' 2023-09-14T17:56:09,593 adding 'westpa/core/propagators/executable.py' 2023-09-14T17:56:09,595 adding 'westpa/core/reweight/__init__.py' 2023-09-14T17:56:09,898 adding 'westpa/core/reweight/_reweight.cpython-311-arm-linux-gnueabihf.so' 2023-09-14T17:56:09,912 adding 'westpa/core/reweight/matrix.py' 2023-09-14T17:56:09,914 adding 'westpa/fasthist/__init__.py' 2023-09-14T17:56:09,916 adding 'westpa/fasthist/__main__.py' 2023-09-14T17:56:10,210 adding 'westpa/fasthist/_fasthist.cpython-311-arm-linux-gnueabihf.so' 2023-09-14T17:56:10,224 adding 'westpa/mclib/__init__.py' 2023-09-14T17:56:10,226 adding 'westpa/mclib/__main__.py' 2023-09-14T17:56:10,523 adding 'westpa/mclib/_mclib.cpython-311-arm-linux-gnueabihf.so' 2023-09-14T17:56:10,535 adding 'westpa/oldtools/__init__.py' 2023-09-14T17:56:10,537 adding 'westpa/oldtools/files.py' 2023-09-14T17:56:10,538 adding 'westpa/oldtools/miscfn.py' 2023-09-14T17:56:10,540 adding 'westpa/oldtools/aframe/__init__.py' 2023-09-14T17:56:10,542 adding 'westpa/oldtools/aframe/atool.py' 2023-09-14T17:56:10,543 adding 'westpa/oldtools/aframe/base_mixin.py' 2023-09-14T17:56:10,545 adding 'westpa/oldtools/aframe/binning.py' 2023-09-14T17:56:10,548 adding 'westpa/oldtools/aframe/data_reader.py' 2023-09-14T17:56:10,550 adding 'westpa/oldtools/aframe/iter_range.py' 2023-09-14T17:56:10,552 adding 'westpa/oldtools/aframe/kinetics.py' 2023-09-14T17:56:10,554 adding 'westpa/oldtools/aframe/mcbs.py' 2023-09-14T17:56:10,555 adding 'westpa/oldtools/aframe/output.py' 2023-09-14T17:56:10,557 adding 'westpa/oldtools/aframe/plotting.py' 2023-09-14T17:56:10,559 adding 'westpa/oldtools/aframe/trajwalker.py' 2023-09-14T17:56:10,561 adding 'westpa/oldtools/aframe/transitions.py' 2023-09-14T17:56:10,563 adding 'westpa/oldtools/cmds/__init__.py' 2023-09-14T17:56:10,565 adding 'westpa/oldtools/cmds/w_ttimes.py' 2023-09-14T17:56:10,567 adding 'westpa/oldtools/stats/__init__.py' 2023-09-14T17:56:10,569 adding 'westpa/oldtools/stats/accumulator.py' 2023-09-14T17:56:10,570 adding 'westpa/oldtools/stats/edfs.py' 2023-09-14T17:56:10,572 adding 'westpa/oldtools/stats/mcbs.py' 2023-09-14T17:56:10,574 adding 'westpa/tools/__init__.py' 2023-09-14T17:56:10,577 adding 'westpa/tools/binning.py' 2023-09-14T17:56:10,580 adding 'westpa/tools/core.py' 2023-09-14T17:56:10,581 adding 'westpa/tools/data_reader.py' 2023-09-14T17:56:10,583 adding 'westpa/tools/dtypes.py' 2023-09-14T17:56:10,585 adding 'westpa/tools/iter_range.py' 2023-09-14T17:56:10,588 adding 'westpa/tools/kinetics_tool.py' 2023-09-14T17:56:10,590 adding 'westpa/tools/plot.py' 2023-09-14T17:56:10,591 adding 'westpa/tools/progress.py' 2023-09-14T17:56:10,593 adding 'westpa/tools/selected_segs.py' 2023-09-14T17:56:10,597 adding 'westpa/tools/wipi.py' 2023-09-14T17:56:10,599 adding 'westpa/trajtree/__init__.py' 2023-09-14T17:56:10,742 adding 'westpa/trajtree/_trajtree.cpython-311-arm-linux-gnueabihf.so' 2023-09-14T17:56:10,748 adding 'westpa/trajtree/trajtree.py' 2023-09-14T17:56:10,750 adding 'westpa/westext/__init__.py' 2023-09-14T17:56:10,751 adding 'westpa/westext/adaptvoronoi/__init__.py' 2023-09-14T17:56:10,753 adding 'westpa/westext/adaptvoronoi/adaptVor_driver.py' 2023-09-14T17:56:10,754 adding 'westpa/westext/stringmethod/__init__.py' 2023-09-14T17:56:10,755 adding 'westpa/westext/stringmethod/fourier_fitting.py' 2023-09-14T17:56:10,757 adding 'westpa/westext/stringmethod/string_driver.py' 2023-09-14T17:56:10,759 adding 'westpa/westext/stringmethod/string_method.py' 2023-09-14T17:56:10,761 adding 'westpa/westext/weed/BinCluster.py' 2023-09-14T17:56:10,762 adding 'westpa/westext/weed/ProbAdjustEquil.py' 2023-09-14T17:56:10,764 adding 'westpa/westext/weed/UncertMath.py' 2023-09-14T17:56:10,765 adding 'westpa/westext/weed/__init__.py' 2023-09-14T17:56:10,767 adding 'westpa/westext/weed/weed_driver.py' 2023-09-14T17:56:10,768 adding 'westpa/westext/wess/ProbAdjust.py' 2023-09-14T17:56:10,770 adding 'westpa/westext/wess/__init__.py' 2023-09-14T17:56:10,771 adding 'westpa/westext/wess/wess_driver.py' 2023-09-14T17:56:10,773 adding 'westpa/work_managers/__init__.py' 2023-09-14T17:56:10,775 adding 'westpa/work_managers/core.py' 2023-09-14T17:56:10,776 adding 'westpa/work_managers/environment.py' 2023-09-14T17:56:10,778 adding 'westpa/work_managers/mpi.py' 2023-09-14T17:56:10,779 adding 'westpa/work_managers/processes.py' 2023-09-14T17:56:10,781 adding 'westpa/work_managers/serial.py' 2023-09-14T17:56:10,782 adding 'westpa/work_managers/threads.py' 2023-09-14T17:56:10,783 adding 'westpa/work_managers/zeromq/__init__.py' 2023-09-14T17:56:10,786 adding 'westpa/work_managers/zeromq/core.py' 2023-09-14T17:56:10,788 adding 'westpa/work_managers/zeromq/node.py' 2023-09-14T17:56:10,790 adding 'westpa/work_managers/zeromq/work_manager.py' 2023-09-14T17:56:10,792 adding 'westpa/work_managers/zeromq/worker.py' 2023-09-14T17:56:10,794 adding 'westpa-2.0b5.dist-info/AUTHORS' 2023-09-14T17:56:10,795 adding 'westpa-2.0b5.dist-info/LICENSE' 2023-09-14T17:56:10,797 adding 'westpa-2.0b5.dist-info/METADATA' 2023-09-14T17:56:10,798 adding 'westpa-2.0b5.dist-info/WHEEL' 2023-09-14T17:56:10,799 adding 'westpa-2.0b5.dist-info/entry_points.txt' 2023-09-14T17:56:10,799 adding 'westpa-2.0b5.dist-info/top_level.txt' 2023-09-14T17:56:10,802 adding 'westpa-2.0b5.dist-info/RECORD' 2023-09-14T17:56:10,844 removing build/bdist.linux-armv7l/wheel 2023-09-14T17:56:11,054 Building wheel for westpa (pyproject.toml): finished with status 'done' 2023-09-14T17:56:11,162 Created wheel for westpa: filename=westpa-2.0b5-cp311-cp311-linux_armv7l.whl size=3777058 sha256=9f0593de33c94430b0a9806ee07880c9db8d1189512f3c3214e0e653cc6f494f 2023-09-14T17:56:11,164 Stored in directory: /tmp/pip-ephem-wheel-cache-dvecqakm/wheels/da/31/e4/4c7b64c39f574d3437b1301c5f338b47b1fa03f876c57dd022 2023-09-14T17:56:11,181 Successfully built westpa 2023-09-14T17:56:11,285 Removed build tracker: '/tmp/pip-build-tracker-15ggm6_6'