2023-09-25T23:21:12,524 Created temporary directory: /tmp/pip-build-tracker-a6hvv009 2023-09-25T23:21:12,525 Initialized build tracking at /tmp/pip-build-tracker-a6hvv009 2023-09-25T23:21:12,525 Created build tracker: /tmp/pip-build-tracker-a6hvv009 2023-09-25T23:21:12,526 Entered build tracker: /tmp/pip-build-tracker-a6hvv009 2023-09-25T23:21:12,527 Created temporary directory: /tmp/pip-wheel-46pwxw0w 2023-09-25T23:21:12,530 Created temporary directory: /tmp/pip-ephem-wheel-cache-e3icd1gw 2023-09-25T23:21:12,551 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-25T23:21:12,555 2 location(s) to search for versions of readsparse: 2023-09-25T23:21:12,555 * https://pypi.org/simple/readsparse/ 2023-09-25T23:21:12,555 * https://www.piwheels.org/simple/readsparse/ 2023-09-25T23:21:12,556 Fetching project page and analyzing links: https://pypi.org/simple/readsparse/ 2023-09-25T23:21:12,557 Getting page https://pypi.org/simple/readsparse/ 2023-09-25T23:21:12,558 Found index url https://pypi.org/simple/ 2023-09-25T23:21:12,792 Fetched page https://pypi.org/simple/readsparse/ as application/vnd.pypi.simple.v1+json 2023-09-25T23:21:12,796 Found link https://files.pythonhosted.org/packages/b9/10/ccd6ef86c5b2c48858e73b9edec7e9ffb1df05d82065218b25e1fd5f76f0/readsparse-0.1.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1 2023-09-25T23:21:12,797 Found link https://files.pythonhosted.org/packages/7e/8e/46903369b94b69459cabbe187a9a11cfbfe054fe1dbe4c29ccf3efecc816/readsparse-0.1.1.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.1 2023-09-25T23:21:12,798 Found link https://files.pythonhosted.org/packages/82/30/5b2702f21721c857d89f3f78c45ef2de70f1efa6b49163cdb9b69e784566/readsparse-0.1.2.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.2 2023-09-25T23:21:12,799 Found link https://files.pythonhosted.org/packages/ce/1c/b2e3f2ff1510ad32d1b6bbac2885f689350754b9a2bf1c50eade8e0dc61f/readsparse-0.1.2.post1.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.2.post1 2023-09-25T23:21:12,799 Found link https://files.pythonhosted.org/packages/b5/0e/4eda5912cdecda534957c06ef53ad3893e09093171f22229c97bde0881f2/readsparse-0.1.3.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.3 2023-09-25T23:21:12,800 Found link https://files.pythonhosted.org/packages/cc/5c/4f7025477e92966230a4b46f486fdb78949747f8547c0d662fd191e29946/readsparse-0.1.3.post1.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.3.post1 2023-09-25T23:21:12,801 Found link https://files.pythonhosted.org/packages/4f/46/ecfbe563e4f2abc52bddc53be1906113ab7ba3f9546ee25a373ff63af83b/readsparse-0.1.4.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.4 2023-09-25T23:21:12,802 Found link https://files.pythonhosted.org/packages/17/4f/2f960ed66ce04da4b660f1c065635047c05a8da8d66347601e40692a05fc/readsparse-0.1.4.post1.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.4.post1 2023-09-25T23:21:12,802 Found link https://files.pythonhosted.org/packages/bb/85/1e44c7738d0cd32d2690102df866bb600475a633b0fddf410827717f7c1c/readsparse-0.1.4.post2.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.4.post2 2023-09-25T23:21:12,803 Found link https://files.pythonhosted.org/packages/7d/b0/75c3880f074ddb8894e8f85bbc270ed2fdbfd2d0963ee089645304e8453e/readsparse-0.1.4.post3.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.4.post3 2023-09-25T23:21:12,804 Found link https://files.pythonhosted.org/packages/63/f7/998777c4b0b4eb5157e3da6dcccbf139a510169a7dafe2f23b9bca07a831/readsparse-0.1.5.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5 2023-09-25T23:21:12,804 Found link https://files.pythonhosted.org/packages/d4/23/9c71b7d02d2c112677e4ccd3d8e738ab4de354a73001a95c932620d0b704/readsparse-0.1.5.post1.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post1 2023-09-25T23:21:12,805 Found link https://files.pythonhosted.org/packages/1a/d9/15ff530c66d2e2a684970ad84759cc56db95eef9c843f2f93208198ea955/readsparse-0.1.5.post2.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post2 2023-09-25T23:21:12,806 Found link https://files.pythonhosted.org/packages/16/2f/1e051ea86dc638b0768dc469eed1c208a499ad50c0e373a7b42143131f11/readsparse-0.1.5.post3.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post3 2023-09-25T23:21:12,807 Found link https://files.pythonhosted.org/packages/6c/63/8e7f8baf4133de7ed3aa58c2cba8b2a732169b3aca30e9350d95d2b1e488/readsparse-0.1.5.post4.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post4 2023-09-25T23:21:12,807 Found link https://files.pythonhosted.org/packages/e4/ec/483d58fd7dc21ad8bf9224a956bb1fc1889b721918ecfb398155cfb8ee3c/readsparse-0.1.5.post5.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post5 2023-09-25T23:21:12,808 Found link https://files.pythonhosted.org/packages/91/b0/c31bf9584c65119702d7d3fc2e832c549e42a8933b4e4858be6b0885add3/readsparse-0.1.5.post6.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post6 2023-09-25T23:21:12,808 Found link https://files.pythonhosted.org/packages/ce/42/9dcf37127da3375c5d7734e9ade8f4794dd2eca563e96083eeffd8b5561f/readsparse-0.1.5.post7.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post7 2023-09-25T23:21:12,809 Found link https://files.pythonhosted.org/packages/a5/a2/f75ba73e761a6bda2ce5d63191bffc6dfce37b7fc88ea8b210d69e354ad7/readsparse-0.1.5.post8.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post8 2023-09-25T23:21:12,809 Found link https://files.pythonhosted.org/packages/f0/c8/812eed041db81a40a6acb29a8287d784fc7fcb22805b20af37216385e7d2/readsparse-0.1.5.post9.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post9 2023-09-25T23:21:12,810 Found link https://files.pythonhosted.org/packages/1a/14/dc131e90fa811d396dbc7f70c5d83cbd65849065354109c3f7b0240d5870/readsparse-0.1.5.post10.tar.gz (from https://pypi.org/simple/readsparse/), version: 0.1.5.post10 2023-09-25T23:21:12,811 Fetching project page and analyzing links: https://www.piwheels.org/simple/readsparse/ 2023-09-25T23:21:12,811 Getting page https://www.piwheels.org/simple/readsparse/ 2023-09-25T23:21:12,812 Found index url https://www.piwheels.org/simple/ 2023-09-25T23:21:12,979 Fetched page https://www.piwheels.org/simple/readsparse/ as text/html 2023-09-25T23:21:12,980 Skipping link: not a file: https://www.piwheels.org/simple/readsparse/ 2023-09-25T23:21:12,981 Skipping link: not a file: https://pypi.org/simple/readsparse/ 2023-09-25T23:21:13,002 Given no hashes to check 1 links for project 'readsparse': discarding no candidates 2023-09-25T23:21:13,020 Collecting readsparse==0.1.5.post10 2023-09-25T23:21:13,022 Created temporary directory: /tmp/pip-unpack-_iu3_nsq 2023-09-25T23:21:13,234 Downloading readsparse-0.1.5.post10.tar.gz (39 kB) 2023-09-25T23:21:13,324 Added readsparse==0.1.5.post10 from https://files.pythonhosted.org/packages/1a/14/dc131e90fa811d396dbc7f70c5d83cbd65849065354109c3f7b0240d5870/readsparse-0.1.5.post10.tar.gz to build tracker '/tmp/pip-build-tracker-a6hvv009' 2023-09-25T23:21:13,330 Created temporary directory: /tmp/pip-build-env-uf6hy6al 2023-09-25T23:21:13,334 Installing build dependencies: started 2023-09-25T23:21:13,336 Running command pip subprocess to install build dependencies 2023-09-25T23:21:14,470 Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2023-09-25T23:21:14,966 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-09-25T23:21:16,698 Collecting cython>=3.0.0 2023-09-25T23:21:16,700 Obtaining dependency information for cython>=3.0.0 from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata 2023-09-25T23:21:16,707 Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB) 2023-09-25T23:21:17,952 Collecting setuptools 2023-09-25T23:21:17,953 Obtaining dependency information for setuptools from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata 2023-09-25T23:21:17,959 Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB) 2023-09-25T23:21:18,162 Collecting wheel 2023-09-25T23:21:18,177 Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB) 2023-09-25T23:21:18,906 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-25T23:21:18,914 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-25T23:21:18,921 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-25T23:21:18,928 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-25T23:21:18,935 Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11) 2023-09-25T23:21:19,316 Collecting numpy>=1.11.1 2023-09-25T23:21:20,198 Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.2-cp311-cp311-linux_armv7l.whl (12.5 MB) 2023-09-25T23:21:20,815 Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB) 2023-09-25T23:21:20,857 Using cached setuptools-68.2.2-py3-none-any.whl (807 kB) 2023-09-25T23:21:23,302 Installing collected packages: wheel, setuptools, numpy, cython 2023-09-25T23:21:23,524 Creating /tmp/pip-build-env-uf6hy6al/overlay/local/bin 2023-09-25T23:21:23,526 changing mode of /tmp/pip-build-env-uf6hy6al/overlay/local/bin/wheel to 755 2023-09-25T23:21:34,276 changing mode of /tmp/pip-build-env-uf6hy6al/overlay/local/bin/f2py to 755 2023-09-25T23:21:34,278 changing mode of /tmp/pip-build-env-uf6hy6al/overlay/local/bin/f2py3 to 755 2023-09-25T23:21:34,280 changing mode of /tmp/pip-build-env-uf6hy6al/overlay/local/bin/f2py3.11 to 755 2023-09-25T23:21:37,240 changing mode of /tmp/pip-build-env-uf6hy6al/overlay/local/bin/cygdb to 755 2023-09-25T23:21:37,242 changing mode of /tmp/pip-build-env-uf6hy6al/overlay/local/bin/cython to 755 2023-09-25T23:21:37,244 changing mode of /tmp/pip-build-env-uf6hy6al/overlay/local/bin/cythonize to 755 2023-09-25T23:21:37,276 Successfully installed cython-3.0.2 numpy-1.25.2 setuptools-68.2.2 wheel-0.41.2 2023-09-25T23:21:37,900 Installing build dependencies: finished with status 'done' 2023-09-25T23:21:37,912 Getting requirements to build wheel: started 2023-09-25T23:21:37,913 Running command Getting requirements to build wheel 2023-09-25T23:21:38,745 /tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/extension.py:134: UserWarning: Unknown Extension options: 'compiler_directives', 'install_requires' 2023-09-25T23:21:38,745 warnings.warn(msg) 2023-09-25T23:21:38,777 /tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:314: InformationOnly: Normalizing '0.1.5-10' to '0.1.5.post10' 2023-09-25T23:21:38,778 self.metadata.version = self._normalize_version( 2023-09-25T23:21:38,816 running egg_info 2023-09-25T23:21:38,823 writing readsparse.egg-info/PKG-INFO 2023-09-25T23:21:38,826 writing dependency_links to readsparse.egg-info/dependency_links.txt 2023-09-25T23:21:38,828 writing top-level names to readsparse.egg-info/top_level.txt 2023-09-25T23:21:38,853 reading manifest file 'readsparse.egg-info/SOURCES.txt' 2023-09-25T23:21:38,855 reading manifest template 'MANIFEST.in' 2023-09-25T23:21:38,861 warning: no previously-included files matching '*.o' found anywhere in distribution 2023-09-25T23:21:38,862 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-09-25T23:21:38,862 warning: no previously-included files matching '*.md' found anywhere in distribution 2023-09-25T23:21:38,863 warning: no previously-included files found matching '.gitignore' 2023-09-25T23:21:38,863 warning: no previously-included files found matching '.gitattributes' 2023-09-25T23:21:38,864 warning: no previously-included files found matching 'readsparse/*.cpp' 2023-09-25T23:21:38,864 warning: no previously-included files found matching 'docs/*' 2023-09-25T23:21:38,865 no previously-included directories found matching 'docs/*' 2023-09-25T23:21:38,866 warning: no previously-included files found matching 'example/*' 2023-09-25T23:21:38,866 no previously-included directories found matching 'example/*' 2023-09-25T23:21:38,867 warning: no previously-included files found matching 'src/Rwrapper.cpp' 2023-09-25T23:21:38,867 warning: no previously-included files found matching 'src/RcppExports.cpp' 2023-09-25T23:21:38,868 no previously-included directories found matching 'autom4te.cache/*' 2023-09-25T23:21:38,868 adding license file 'LICENSE' 2023-09-25T23:21:38,870 writing manifest file 'readsparse.egg-info/SOURCES.txt' 2023-09-25T23:21:38,986 Getting requirements to build wheel: finished with status 'done' 2023-09-25T23:21:38,995 Created temporary directory: /tmp/pip-modern-metadata-lejwrrau 2023-09-25T23:21:38,997 Preparing metadata (pyproject.toml): started 2023-09-25T23:21:38,998 Running command Preparing metadata (pyproject.toml) 2023-09-25T23:21:39,719 /tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/extension.py:134: UserWarning: Unknown Extension options: 'compiler_directives', 'install_requires' 2023-09-25T23:21:39,719 warnings.warn(msg) 2023-09-25T23:21:39,738 /tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:314: InformationOnly: Normalizing '0.1.5-10' to '0.1.5.post10' 2023-09-25T23:21:39,739 self.metadata.version = self._normalize_version( 2023-09-25T23:21:39,763 running dist_info 2023-09-25T23:21:39,784 creating /tmp/pip-modern-metadata-lejwrrau/readsparse.egg-info 2023-09-25T23:21:39,790 writing /tmp/pip-modern-metadata-lejwrrau/readsparse.egg-info/PKG-INFO 2023-09-25T23:21:39,793 writing dependency_links to /tmp/pip-modern-metadata-lejwrrau/readsparse.egg-info/dependency_links.txt 2023-09-25T23:21:39,795 writing top-level names to /tmp/pip-modern-metadata-lejwrrau/readsparse.egg-info/top_level.txt 2023-09-25T23:21:39,796 writing manifest file '/tmp/pip-modern-metadata-lejwrrau/readsparse.egg-info/SOURCES.txt' 2023-09-25T23:21:39,818 reading manifest file '/tmp/pip-modern-metadata-lejwrrau/readsparse.egg-info/SOURCES.txt' 2023-09-25T23:21:39,821 reading manifest template 'MANIFEST.in' 2023-09-25T23:21:39,826 warning: no previously-included files matching '*.o' found anywhere in distribution 2023-09-25T23:21:39,826 warning: no previously-included files matching '*.so' found anywhere in distribution 2023-09-25T23:21:39,827 warning: no previously-included files matching '*.md' found anywhere in distribution 2023-09-25T23:21:39,828 warning: no previously-included files found matching '.gitignore' 2023-09-25T23:21:39,828 warning: no previously-included files found matching '.gitattributes' 2023-09-25T23:21:39,829 warning: no previously-included files found matching 'readsparse/*.cpp' 2023-09-25T23:21:39,830 warning: no previously-included files found matching 'docs/*' 2023-09-25T23:21:39,830 no previously-included directories found matching 'docs/*' 2023-09-25T23:21:39,831 warning: no previously-included files found matching 'example/*' 2023-09-25T23:21:39,832 no previously-included directories found matching 'example/*' 2023-09-25T23:21:39,833 warning: no previously-included files found matching 'src/Rwrapper.cpp' 2023-09-25T23:21:39,833 warning: no previously-included files found matching 'src/RcppExports.cpp' 2023-09-25T23:21:39,834 no previously-included directories found matching 'autom4te.cache/*' 2023-09-25T23:21:39,834 adding license file 'LICENSE' 2023-09-25T23:21:39,835 writing manifest file '/tmp/pip-modern-metadata-lejwrrau/readsparse.egg-info/SOURCES.txt' 2023-09-25T23:21:39,836 creating '/tmp/pip-modern-metadata-lejwrrau/readsparse-0.1.5.post10.dist-info' 2023-09-25T23:21:40,029 Preparing metadata (pyproject.toml): finished with status 'done' 2023-09-25T23:21:40,034 Source in /tmp/pip-wheel-46pwxw0w/readsparse_ae7d2952bdd34d13b05f825525d6d9f9 has version 0.1.5.post10, which satisfies requirement readsparse==0.1.5.post10 from https://files.pythonhosted.org/packages/1a/14/dc131e90fa811d396dbc7f70c5d83cbd65849065354109c3f7b0240d5870/readsparse-0.1.5.post10.tar.gz 2023-09-25T23:21:40,035 Removed readsparse==0.1.5.post10 from https://files.pythonhosted.org/packages/1a/14/dc131e90fa811d396dbc7f70c5d83cbd65849065354109c3f7b0240d5870/readsparse-0.1.5.post10.tar.gz from build tracker '/tmp/pip-build-tracker-a6hvv009' 2023-09-25T23:21:40,038 Created temporary directory: /tmp/pip-unpack-bps8t3vf 2023-09-25T23:21:40,039 Created temporary directory: /tmp/pip-unpack-ytqi8gb5 2023-09-25T23:21:40,041 Building wheels for collected packages: readsparse 2023-09-25T23:21:40,045 Created temporary directory: /tmp/pip-wheel-pxoyje85 2023-09-25T23:21:40,046 Destination directory: /tmp/pip-wheel-pxoyje85 2023-09-25T23:21:40,048 Building wheel for readsparse (pyproject.toml): started 2023-09-25T23:21:40,049 Running command Building wheel for readsparse (pyproject.toml) 2023-09-25T23:21:40,742 /tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/extension.py:134: UserWarning: Unknown Extension options: 'compiler_directives', 'install_requires' 2023-09-25T23:21:40,743 warnings.warn(msg) 2023-09-25T23:21:40,761 /tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py:314: InformationOnly: Normalizing '0.1.5-10' to '0.1.5.post10' 2023-09-25T23:21:40,762 self.metadata.version = self._normalize_version( 2023-09-25T23:21:40,823 running bdist_wheel 2023-09-25T23:21:40,858 running build 2023-09-25T23:21:40,859 running build_py 2023-09-25T23:21:40,866 creating build 2023-09-25T23:21:40,867 creating build/lib.linux-armv7l-cpython-311 2023-09-25T23:21:40,868 creating build/lib.linux-armv7l-cpython-311/readsparse 2023-09-25T23:21:40,869 copying readsparse/__init__.py -> build/lib.linux-armv7l-cpython-311/readsparse 2023-09-25T23:21:40,872 running build_ext 2023-09-25T23:21:46,106 Error compiling Cython file: 2023-09-25T23:21:46,106 ------------------------------------------------------------ 2023-09-25T23:21:46,107 ... 2023-09-25T23:21:46,108 int_t_ *indices, 2023-09-25T23:21:46,108 real_t_ *values, 2023-09-25T23:21:46,109 size_t nrows, size_t ncols 2023-09-25T23:21:46,109 ) 2023-09-25T23:21:46,110 cdef int_t* get_ptr_int(np.ndarray[int_t, ndim=1] a): 2023-09-25T23:21:46,111 ^ 2023-09-25T23:21:46,112 ------------------------------------------------------------ 2023-09-25T23:21:46,113 readsparse/cpp_interface.pxi:220:23: Type is not specialized 2023-09-25T23:21:46,114 Error compiling Cython file: 2023-09-25T23:21:46,115 ------------------------------------------------------------ 2023-09-25T23:21:46,116 ... 2023-09-25T23:21:46,116 if a.shape[0]: 2023-09-25T23:21:46,117 return &a[0] 2023-09-25T23:21:46,118 else: 2023-09-25T23:21:46,119 return NULL 2023-09-25T23:21:46,120 cdef real_t* get_ptr_num(np.ndarray[real_t, ndim=1] a): 2023-09-25T23:21:46,121 ^ 2023-09-25T23:21:46,122 ------------------------------------------------------------ 2023-09-25T23:21:46,124 readsparse/cpp_interface.pxi:226:24: Type is not specialized 2023-09-25T23:21:46,126 Error compiling Cython file: 2023-09-25T23:21:46,126 ------------------------------------------------------------ 2023-09-25T23:21:46,127 ... 2023-09-25T23:21:46,127 if a.shape[0]: 2023-09-25T23:21:46,127 return &a[0] 2023-09-25T23:21:46,128 else: 2023-09-25T23:21:46,128 return NULL 2023-09-25T23:21:46,129 cdef label_t* get_ptr_lab(np.ndarray[label_t, ndim=1] a): 2023-09-25T23:21:46,130 ^ 2023-09-25T23:21:46,130 ------------------------------------------------------------ 2023-09-25T23:21:46,131 readsparse/cpp_interface.pxi:232:25: Type is not specialized 2023-09-25T23:22:02,571 --- Checking compiler support for option '-march=native' 2023-09-25T23:22:02,571 --- Checking compiler support for '__restrict' qualifier 2023-09-25T23:22:02,572 --- Checking compiler support for option '-O2' 2023-09-25T23:22:02,572 --- Checking compiler support for option '-std=c++11' 2023-09-25T23:22:02,573 Compiling readsparse/cpp_interface_uint64_t.pyx because it changed. 2023-09-25T23:22:02,573 [1/1] Cythonizing readsparse/cpp_interface_uint64_t.pyx 2023-09-25T23:22:02,574 Traceback (most recent call last): 2023-09-25T23:22:02,574 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in 2023-09-25T23:22:02,575 main() 2023-09-25T23:22:02,575 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main 2023-09-25T23:22:02,575 json_out['return_val'] = hook(**hook_input['kwargs']) 2023-09-25T23:22:02,576 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-25T23:22:02,577 File "/usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 251, in build_wheel 2023-09-25T23:22:02,577 return _build_backend().build_wheel(wheel_directory, config_settings, 2023-09-25T23:22:02,578 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-25T23:22:02,578 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 434, in build_wheel 2023-09-25T23:22:02,579 return self._build_with_temp_dir( 2023-09-25T23:22:02,579 ^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-25T23:22:02,580 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 419, in _build_with_temp_dir 2023-09-25T23:22:02,580 self.run_setup() 2023-09-25T23:22:02,581 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 507, in run_setup 2023-09-25T23:22:02,581 super(_BuildMetaLegacyBackend, self).run_setup(setup_script=setup_script) 2023-09-25T23:22:02,582 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/build_meta.py", line 341, in run_setup 2023-09-25T23:22:02,583 exec(code, locals()) 2023-09-25T23:22:02,583 File "", line 208, in 2023-09-25T23:22:02,584 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/__init__.py", line 103, in setup 2023-09-25T23:22:02,584 return distutils.core.setup(**attrs) 2023-09-25T23:22:02,585 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-25T23:22:02,585 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 185, in setup 2023-09-25T23:22:02,586 return run_commands(dist) 2023-09-25T23:22:02,587 ^^^^^^^^^^^^^^^^^^ 2023-09-25T23:22:02,587 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/core.py", line 201, in run_commands 2023-09-25T23:22:02,588 dist.run_commands() 2023-09-25T23:22:02,588 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 969, in run_commands 2023-09-25T23:22:02,589 self.run_command(cmd) 2023-09-25T23:22:02,590 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py", line 989, in run_command 2023-09-25T23:22:02,590 super().run_command(command) 2023-09-25T23:22:02,590 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-25T23:22:02,591 cmd_obj.run() 2023-09-25T23:22:02,591 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/wheel/bdist_wheel.py", line 364, in run 2023-09-25T23:22:02,592 self.run_command("build") 2023-09-25T23:22:02,592 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command 2023-09-25T23:22:02,593 self.distribution.run_command(command) 2023-09-25T23:22:02,593 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py", line 989, in run_command 2023-09-25T23:22:02,594 super().run_command(command) 2023-09-25T23:22:02,594 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-25T23:22:02,594 cmd_obj.run() 2023-09-25T23:22:02,595 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build.py", line 131, in run 2023-09-25T23:22:02,595 self.run_command(cmd_name) 2023-09-25T23:22:02,596 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py", line 318, in run_command 2023-09-25T23:22:02,597 self.distribution.run_command(command) 2023-09-25T23:22:02,598 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/dist.py", line 989, in run_command 2023-09-25T23:22:02,598 super().run_command(command) 2023-09-25T23:22:02,599 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/dist.py", line 988, in run_command 2023-09-25T23:22:02,600 cmd_obj.run() 2023-09-25T23:22:02,601 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build_ext.py", line 345, in run 2023-09-25T23:22:02,602 self.build_extensions() 2023-09-25T23:22:02,603 File "", line 64, in build_extensions 2023-09-25T23:22:02,604 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build_ext.py", line 467, in build_extensions 2023-09-25T23:22:02,605 self._build_extensions_serial() 2023-09-25T23:22:02,606 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/setuptools/_distutils/command/build_ext.py", line 493, in _build_extensions_serial 2023-09-25T23:22:02,607 self.build_extension(ext) 2023-09-25T23:22:02,608 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/Cython/Distutils/build_ext.py", line 122, in build_extension 2023-09-25T23:22:02,609 new_ext = cythonize( 2023-09-25T23:22:02,610 ^^^^^^^^^^ 2023-09-25T23:22:02,611 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/Cython/Build/Dependencies.py", line 1134, in cythonize 2023-09-25T23:22:02,612 cythonize_one(*args) 2023-09-25T23:22:02,613 File "/tmp/pip-build-env-uf6hy6al/overlay/local/lib/python3.11/dist-packages/Cython/Build/Dependencies.py", line 1301, in cythonize_one 2023-09-25T23:22:02,614 raise CompileError(None, pyx_file) 2023-09-25T23:22:02,615 Cython.Compiler.Errors.CompileError: readsparse/cpp_interface_uint64_t.pyx 2023-09-25T23:22:03,919 ERROR: [present-rich] Building wheel for readsparse (pyproject.toml) exited with 1 2023-09-25T23:22:03,933 [bold magenta]full command[/]: [blue]/usr/bin/python3 /usr/local/lib/python3.11/dist-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py build_wheel /tmp/tmpei2raac_[/] 2023-09-25T23:22:03,934 [bold magenta]cwd[/]: /tmp/pip-wheel-46pwxw0w/readsparse_ae7d2952bdd34d13b05f825525d6d9f9 2023-09-25T23:22:03,934 Building wheel for readsparse (pyproject.toml): finished with status 'error' 2023-09-25T23:22:03,936 ERROR: Failed building wheel for readsparse 2023-09-25T23:22:03,939 Failed to build readsparse 2023-09-25T23:22:03,940 ERROR: Failed to build one or more wheels 2023-09-25T23:22:03,941 Exception information: 2023-09-25T23:22:03,941 Traceback (most recent call last): 2023-09-25T23:22:03,941 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper 2023-09-25T23:22:03,941 status = run_func(*args) 2023-09-25T23:22:03,941 ^^^^^^^^^^^^^^^ 2023-09-25T23:22:03,941 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/cli/req_command.py", line 248, in wrapper 2023-09-25T23:22:03,941 return func(self, options, args) 2023-09-25T23:22:03,941 ^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-09-25T23:22:03,941 File "/usr/local/lib/python3.11/dist-packages/pip/_internal/commands/wheel.py", line 181, in run 2023-09-25T23:22:03,941 raise CommandError("Failed to build one or more wheels") 2023-09-25T23:22:03,941 pip._internal.exceptions.CommandError: Failed to build one or more wheels 2023-09-25T23:22:03,944 Removed build tracker: '/tmp/pip-build-tracker-a6hvv009'