2023-09-26T12:55:17,746 Created temporary directory: /tmp/pip-build-tracker-qnd29wob
2023-09-26T12:55:17,747 Initialized build tracking at /tmp/pip-build-tracker-qnd29wob
2023-09-26T12:55:17,747 Created build tracker: /tmp/pip-build-tracker-qnd29wob
2023-09-26T12:55:17,748 Entered build tracker: /tmp/pip-build-tracker-qnd29wob
2023-09-26T12:55:17,749 Created temporary directory: /tmp/pip-wheel-x7zsrbhl
2023-09-26T12:55:17,752 Created temporary directory: /tmp/pip-ephem-wheel-cache-s6qoa9mr
2023-09-26T12:55:17,774 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-26T12:55:17,778 2 location(s) to search for versions of flydra-core:
2023-09-26T12:55:17,778 * https://pypi.org/simple/flydra-core/
2023-09-26T12:55:17,778 * https://www.piwheels.org/simple/flydra-core/
2023-09-26T12:55:17,778 Fetching project page and analyzing links: https://pypi.org/simple/flydra-core/
2023-09-26T12:55:17,779 Getting page https://pypi.org/simple/flydra-core/
2023-09-26T12:55:17,781 Found index url https://pypi.org/simple/
2023-09-26T12:55:18,053 Fetched page https://pypi.org/simple/flydra-core/ as application/vnd.pypi.simple.v1+json
2023-09-26T12:55:18,055   Found link https://files.pythonhosted.org/packages/d6/5e/32ee2f385b11d41602ae3946fc7be395111ac2c6ab482317da7d7cffbc09/flydra_core-0.7.10.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.10
2023-09-26T12:55:18,056   Found link https://files.pythonhosted.org/packages/d0/db/f7aaa8a6e6a95ad52b8e82e75d608295cd9d9a12466172fa991828b27528/flydra_core-0.7.11.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.11
2023-09-26T12:55:18,056   Found link https://files.pythonhosted.org/packages/e4/02/387655c6c2eccefba71f9fd0b93ed976c7c9b63801f24d258602474048a9/flydra_core-0.7.12.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.12
2023-09-26T12:55:18,057   Found link https://files.pythonhosted.org/packages/e1/ad/ba869a951df89e63e2e27a149884ea70cdcbfa4e9d8f5c5c439de5db59d5/flydra_core-0.7.13.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.13
2023-09-26T12:55:18,058   Found link https://files.pythonhosted.org/packages/ba/10/131531f7b30a7ec7c57fc24892e8c53240f01699758ece05c000a33c4e61/flydra_core-0.7.14.tar.gz (from https://pypi.org/simple/flydra-core/), version: 0.7.14
2023-09-26T12:55:18,059   Found link https://files.pythonhosted.org/packages/47/2a/8de8cce5e410c3b2b0b0dc1d257b5a6ee7caee4b5d89544f784d19fd4309/flydra_core-0.7.15.tar.gz (from https://pypi.org/simple/flydra-core/) (requires-python:>=3.8), version: 0.7.15
2023-09-26T12:55:18,060   Found link https://files.pythonhosted.org/packages/e5/4a/75bdcf40f33c17b4667f47a36c7ec84d99ac61dc537f2e70655f727d3c20/flydra_core-0.7.16.tar.gz (from https://pypi.org/simple/flydra-core/) (requires-python:>=3.8), version: 0.7.16
2023-09-26T12:55:18,061 Fetching project page and analyzing links: https://www.piwheels.org/simple/flydra-core/
2023-09-26T12:55:18,061 Getting page https://www.piwheels.org/simple/flydra-core/
2023-09-26T12:55:18,063 Found index url https://www.piwheels.org/simple/
2023-09-26T12:55:18,238 Fetched page https://www.piwheels.org/simple/flydra-core/ as text/html
2023-09-26T12:55:18,245   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.16-cp39-cp39-linux_armv7l.whl#sha256=09152c35b510e082bb94054a0f9393ea734fb168c6d75facbebf01f0c5fa0d38 (from https://www.piwheels.org/simple/flydra-core/) (requires-python:>=3.8)
2023-09-26T12:55:18,246   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.16-cp39-cp39-linux_armv6l.whl#sha256=09152c35b510e082bb94054a0f9393ea734fb168c6d75facbebf01f0c5fa0d38 (from https://www.piwheels.org/simple/flydra-core/) (requires-python:>=3.8)
2023-09-26T12:55:18,247   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.15-cp39-cp39-linux_armv7l.whl#sha256=e470add313ca0c058b596e179c63d13d6832395ef14684170f0456afe38db60a (from https://www.piwheels.org/simple/flydra-core/) (requires-python:>=3.8)
2023-09-26T12:55:18,247   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.15-cp39-cp39-linux_armv6l.whl#sha256=e470add313ca0c058b596e179c63d13d6832395ef14684170f0456afe38db60a (from https://www.piwheels.org/simple/flydra-core/) (requires-python:>=3.8)
2023-09-26T12:55:18,248   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp39-cp39-linux_armv7l.whl#sha256=d3bc8999ff1853e020f3bb48464ff1a7717e3887e6a7aa98dcaa002cd5761fec (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,249   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp39-cp39-linux_armv6l.whl#sha256=d3bc8999ff1853e020f3bb48464ff1a7717e3887e6a7aa98dcaa002cd5761fec (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,249   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp37-cp37m-linux_armv7l.whl#sha256=63af59c5e709aad33bed072e7a6d169f7a89b29e06153cc0b0ba1a055673bc85 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,249   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp37-cp37m-linux_armv6l.whl#sha256=63af59c5e709aad33bed072e7a6d169f7a89b29e06153cc0b0ba1a055673bc85 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,250   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp35-cp35m-linux_armv7l.whl#sha256=3f8a0edffc02ed0827365a892bb716254cead0bb20d7d1f291afc276ca304e4a (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,250   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.14-cp35-cp35m-linux_armv6l.whl#sha256=3f8a0edffc02ed0827365a892bb716254cead0bb20d7d1f291afc276ca304e4a (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,251   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp39-cp39-linux_armv7l.whl#sha256=c8f9d7d4344b357e5ea25019ad6b85b1c9cc6468836e89acb992dfd5a7adbdc6 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,252   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp39-cp39-linux_armv6l.whl#sha256=c8f9d7d4344b357e5ea25019ad6b85b1c9cc6468836e89acb992dfd5a7adbdc6 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,252   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp37-cp37m-linux_armv7l.whl#sha256=4f9b109ae957e3becee04bbb95105c1b362142ac2a8783862f7c8bde548eed94 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,253   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp37-cp37m-linux_armv6l.whl#sha256=4f9b109ae957e3becee04bbb95105c1b362142ac2a8783862f7c8bde548eed94 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,253   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp35-cp35m-linux_armv7l.whl#sha256=7b95615cd65a695b0850d0425312a5b307491cfa2c9ff06b1e3f7352c8a4cab7 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,254   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.13-cp35-cp35m-linux_armv6l.whl#sha256=7b95615cd65a695b0850d0425312a5b307491cfa2c9ff06b1e3f7352c8a4cab7 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,255   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.11-cp37-cp37m-linux_armv7l.whl#sha256=4481fa947ab73d181ac26fe079115f36258de71caca6fa28443e4e53c39a212b (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,255   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.11-cp37-cp37m-linux_armv6l.whl#sha256=4481fa947ab73d181ac26fe079115f36258de71caca6fa28443e4e53c39a212b (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,256   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.11-cp35-cp35m-linux_armv7l.whl#sha256=9a2a07ef77eb2cd5cd2cb2359edc4c9c16104c65cc9ebbe18b58913a6b438ab8 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,256   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.11-cp35-cp35m-linux_armv6l.whl#sha256=9a2a07ef77eb2cd5cd2cb2359edc4c9c16104c65cc9ebbe18b58913a6b438ab8 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,257   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp39-cp39-linux_armv7l.whl#sha256=aac1f0e81b9da9e518121aeaf1dea0b20789c0e42dd76f375c64ea612d00127b (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,257   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp39-cp39-linux_armv6l.whl#sha256=aac1f0e81b9da9e518121aeaf1dea0b20789c0e42dd76f375c64ea612d00127b (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,258   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp35-cp35m-linux_armv7l.whl#sha256=ea95aeb43992d83ea680be08b9ffcdac3800a8956d87feaee64881a2970b5681 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,258   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp35-cp35m-linux_armv6l.whl#sha256=ea95aeb43992d83ea680be08b9ffcdac3800a8956d87feaee64881a2970b5681 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,259   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp37-cp37m-linux_armv6l.whl#sha256=1ca0df03a2f97cd7bf8bdf0bebbb6fbb9ebbc306984bb299061846a786bda323 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,259   Skipping link: No binaries permitted for flydra-core: https://www.piwheels.org/simple/flydra-core/flydra_core-0.7.10-cp37-cp37m-linux_armv7l.whl#sha256=1ca0df03a2f97cd7bf8bdf0bebbb6fbb9ebbc306984bb299061846a786bda323 (from https://www.piwheels.org/simple/flydra-core/)
2023-09-26T12:55:18,260 Skipping link: not a file: https://www.piwheels.org/simple/flydra-core/
2023-09-26T12:55:18,261 Skipping link: not a file: https://pypi.org/simple/flydra-core/
2023-09-26T12:55:18,281 Given no hashes to check 1 links for project 'flydra-core': discarding no candidates
2023-09-26T12:55:18,300 Collecting flydra-core==0.7.15
2023-09-26T12:55:18,302   Created temporary directory: /tmp/pip-unpack-_9sc7nof
2023-09-26T12:55:18,526   Downloading flydra_core-0.7.15.tar.gz (699 kB)
2023-09-26T12:55:18,913   Added flydra-core==0.7.15 from https://files.pythonhosted.org/packages/47/2a/8de8cce5e410c3b2b0b0dc1d257b5a6ee7caee4b5d89544f784d19fd4309/flydra_core-0.7.15.tar.gz to build tracker '/tmp/pip-build-tracker-qnd29wob'
2023-09-26T12:55:18,919   Created temporary directory: /tmp/pip-build-env-psk618y6
2023-09-26T12:55:18,923   Installing build dependencies: started
2023-09-26T12:55:18,925   Running command pip subprocess to install build dependencies
2023-09-26T12:55:20,053   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-26T12:55:20,559   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-26T12:55:22,101   Collecting setuptools>=61
2023-09-26T12:55:22,102     Obtaining dependency information for setuptools>=61 from https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl.metadata
2023-09-26T12:55:22,108     Using cached setuptools-68.2.2-py3-none-any.whl.metadata (6.3 kB)
2023-09-26T12:55:23,503   Collecting cython>=0.29
2023-09-26T12:55:23,504     Obtaining dependency information for cython>=0.29 from https://files.pythonhosted.org/packages/03/e9/9cc0c4f0d8a566089d096254cd25168a0db02dd047863a7f995d8d3eefa7/Cython-3.0.2-py2.py3-none-any.whl.metadata
2023-09-26T12:55:23,510     Using cached Cython-3.0.2-py2.py3-none-any.whl.metadata (3.1 kB)
2023-09-26T12:55:24,232     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-26T12:55:24,239     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-26T12:55:24,246     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-26T12:55:24,253     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-26T12:55:24,260     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2023-09-26T12:55:24,644   Collecting numpy
2023-09-26T12:55:25,528     Using cached https://www.piwheels.org/simple/numpy/numpy-1.25.2-cp311-cp311-linux_armv7l.whl (12.5 MB)
2023-09-26T12:55:26,143   Using cached setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-09-26T12:55:26,182   Using cached Cython-3.0.2-py2.py3-none-any.whl (1.2 MB)
2023-09-26T12:55:28,618   Installing collected packages: setuptools, numpy, cython
2023-09-26T12:55:39,808     Creating /tmp/pip-build-env-psk618y6/overlay/local/bin
2023-09-26T12:55:39,810     changing mode of /tmp/pip-build-env-psk618y6/overlay/local/bin/f2py to 755
2023-09-26T12:55:39,813     changing mode of /tmp/pip-build-env-psk618y6/overlay/local/bin/f2py3 to 755
2023-09-26T12:55:39,815     changing mode of /tmp/pip-build-env-psk618y6/overlay/local/bin/f2py3.11 to 755
2023-09-26T12:55:42,606     changing mode of /tmp/pip-build-env-psk618y6/overlay/local/bin/cygdb to 755
2023-09-26T12:55:42,608     changing mode of /tmp/pip-build-env-psk618y6/overlay/local/bin/cython to 755
2023-09-26T12:55:42,610     changing mode of /tmp/pip-build-env-psk618y6/overlay/local/bin/cythonize to 755
2023-09-26T12:55:42,636   Successfully installed cython-3.0.2 numpy-1.25.2 setuptools-68.2.2
2023-09-26T12:55:43,261   Installing build dependencies: finished with status 'done'
2023-09-26T12:55:43,264   Getting requirements to build wheel: started
2023-09-26T12:55:43,265   Running command Getting requirements to build wheel
2023-09-26T12:55:53,333   Compiling flydra_core/_reconstruct_utils.pyx because it changed.
2023-09-26T12:55:53,333   Compiling flydra_core/_pmat_jacobian.pyx because it changed.
2023-09-26T12:55:53,334   Compiling flydra_core/_pmat_jacobian_water.pyx because it changed.
2023-09-26T12:55:53,335   Compiling flydra_core/_flydra_tracked_object.pyx because it changed.
2023-09-26T12:55:53,335   Compiling flydra_core/_mahalanobis.pyx because it changed.
2023-09-26T12:55:53,336   Compiling flydra_core/_fastgeom.pyx because it changed.
2023-09-26T12:55:53,336   Compiling flydra_core/_Roots3And4.pyx because it changed.
2023-09-26T12:55:53,337   Compiling flydra_core/_refraction.pyx because it changed.
2023-09-26T12:55:53,338   [1/8] Cythonizing flydra_core/_Roots3And4.pyx
2023-09-26T12:55:53,338   [2/8] Cythonizing flydra_core/_fastgeom.pyx
2023-09-26T12:55:53,339   [3/8] Cythonizing flydra_core/_flydra_tracked_object.pyx
2023-09-26T12:55:53,339   [4/8] Cythonizing flydra_core/_mahalanobis.pyx
2023-09-26T12:55:53,340   [5/8] Cythonizing flydra_core/_pmat_jacobian.pyx
2023-09-26T12:55:53,340   [6/8] Cythonizing flydra_core/_pmat_jacobian_water.pyx
2023-09-26T12:55:53,340   [7/8] Cythonizing flydra_core/_reconstruct_utils.pyx
2023-09-26T12:55:53,341   [8/8] Cythonizing flydra_core/_refraction.pyx
2023-09-26T12:55:53,606   running egg_info
2023-09-26T12:55:53,610   writing flydra_core.egg-info/PKG-INFO
2023-09-26T12:55:53,613   writing dependency_links to flydra_core.egg-info/dependency_links.txt
2023-09-26T12:55:53,616   writing entry points to flydra_core.egg-info/entry_points.txt
2023-09-26T12:55:53,617   writing requirements to flydra_core.egg-info/requires.txt
2023-09-26T12:55:53,618   writing top-level names to flydra_core.egg-info/top_level.txt
2023-09-26T12:55:53,639   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_math.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,640   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,640   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,641   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,641   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,642   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,642   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,643   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,643   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,644   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,645   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,645   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,646   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,646   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,647   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,648   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:55:53,648   reading manifest file 'flydra_core.egg-info/SOURCES.txt'
2023-09-26T12:55:53,651   reading manifest template 'MANIFEST.in'
2023-09-26T12:55:53,658   writing manifest file 'flydra_core.egg-info/SOURCES.txt'
2023-09-26T12:55:54,009   Getting requirements to build wheel: finished with status 'done'
2023-09-26T12:55:54,019   Installing backend dependencies: started
2023-09-26T12:55:54,021   Running command pip subprocess to install backend dependencies
2023-09-26T12:55:55,405   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-09-26T12:55:55,919   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-09-26T12:55:56,415   Collecting wheel
2023-09-26T12:55:56,431     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-09-26T12:55:58,645   Installing collected packages: wheel
2023-09-26T12:55:58,866     Creating /tmp/pip-build-env-psk618y6/normal/local/bin
2023-09-26T12:55:58,868     changing mode of /tmp/pip-build-env-psk618y6/normal/local/bin/wheel to 755
2023-09-26T12:55:58,879   Successfully installed wheel-0.41.2
2023-09-26T12:55:59,335   Installing backend dependencies: finished with status 'done'
2023-09-26T12:55:59,337   Created temporary directory: /tmp/pip-modern-metadata-7vbcosg0
2023-09-26T12:55:59,339   Preparing metadata (pyproject.toml): started
2023-09-26T12:55:59,340   Running command Preparing metadata (pyproject.toml)
2023-09-26T12:56:01,152   running dist_info
2023-09-26T12:56:01,161   creating /tmp/pip-modern-metadata-7vbcosg0/flydra_core.egg-info
2023-09-26T12:56:01,166   writing /tmp/pip-modern-metadata-7vbcosg0/flydra_core.egg-info/PKG-INFO
2023-09-26T12:56:01,169   writing dependency_links to /tmp/pip-modern-metadata-7vbcosg0/flydra_core.egg-info/dependency_links.txt
2023-09-26T12:56:01,171   writing entry points to /tmp/pip-modern-metadata-7vbcosg0/flydra_core.egg-info/entry_points.txt
2023-09-26T12:56:01,173   writing requirements to /tmp/pip-modern-metadata-7vbcosg0/flydra_core.egg-info/requires.txt
2023-09-26T12:56:01,174   writing top-level names to /tmp/pip-modern-metadata-7vbcosg0/flydra_core.egg-info/top_level.txt
2023-09-26T12:56:01,175   writing manifest file '/tmp/pip-modern-metadata-7vbcosg0/flydra_core.egg-info/SOURCES.txt'
2023-09-26T12:56:01,194   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_math.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,194   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,195   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,195   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,196   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,196   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,197   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,198   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,198   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,199   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,199   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,200   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,200   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,200   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,201   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,201   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:01,202   reading manifest file '/tmp/pip-modern-metadata-7vbcosg0/flydra_core.egg-info/SOURCES.txt'
2023-09-26T12:56:01,204   reading manifest template 'MANIFEST.in'
2023-09-26T12:56:01,210   writing manifest file '/tmp/pip-modern-metadata-7vbcosg0/flydra_core.egg-info/SOURCES.txt'
2023-09-26T12:56:01,211   creating '/tmp/pip-modern-metadata-7vbcosg0/flydra_core-0.7.15.dist-info'
2023-09-26T12:56:01,429   Preparing metadata (pyproject.toml): finished with status 'done'
2023-09-26T12:56:01,433   Source in /tmp/pip-wheel-x7zsrbhl/flydra-core_bef4e1337590467e93bf685a9c374679 has version 0.7.15, which satisfies requirement flydra-core==0.7.15 from https://files.pythonhosted.org/packages/47/2a/8de8cce5e410c3b2b0b0dc1d257b5a6ee7caee4b5d89544f784d19fd4309/flydra_core-0.7.15.tar.gz
2023-09-26T12:56:01,434   Removed flydra-core==0.7.15 from https://files.pythonhosted.org/packages/47/2a/8de8cce5e410c3b2b0b0dc1d257b5a6ee7caee4b5d89544f784d19fd4309/flydra_core-0.7.15.tar.gz from build tracker '/tmp/pip-build-tracker-qnd29wob'
2023-09-26T12:56:01,439 Created temporary directory: /tmp/pip-unpack-kr9rs6ik
2023-09-26T12:56:01,440 Created temporary directory: /tmp/pip-unpack-wukfhaxa
2023-09-26T12:56:01,449 Building wheels for collected packages: flydra-core
2023-09-26T12:56:01,454   Created temporary directory: /tmp/pip-wheel-mb527qnm
2023-09-26T12:56:01,454   Destination directory: /tmp/pip-wheel-mb527qnm
2023-09-26T12:56:01,456   Building wheel for flydra-core (pyproject.toml): started
2023-09-26T12:56:01,458   Running command Building wheel for flydra-core (pyproject.toml)
2023-09-26T12:56:03,138   running bdist_wheel
2023-09-26T12:56:03,163   running build
2023-09-26T12:56:03,163   running build_py
2023-09-26T12:56:03,169   creating build
2023-09-26T12:56:03,169   creating build/lib.linux-armv7l-cpython-311
2023-09-26T12:56:03,170   creating build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,171   copying flydra_core/undistort.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,173   copying flydra_core/__init__.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,175   copying flydra_core/test_refraction.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,177   copying flydra_core/data_descriptions.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,178   copying flydra_core/debuglock.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,180   copying flydra_core/water.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,181   copying flydra_core/reconstruct.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,189   copying flydra_core/flydra_socket.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,191   copying flydra_core/common_variables.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,192   copying flydra_core/geom.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,194   copying flydra_core/align.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,196   copying flydra_core/version.py -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,198   creating build/lib.linux-armv7l-cpython-311/flydra_core/kalman
2023-09-26T12:56:03,199   copying flydra_core/kalman/point_prob.py -> build/lib.linux-armv7l-cpython-311/flydra_core/kalman
2023-09-26T12:56:03,201   copying flydra_core/kalman/ekf.py -> build/lib.linux-armv7l-cpython-311/flydra_core/kalman
2023-09-26T12:56:03,203   copying flydra_core/kalman/ori_smooth.py -> build/lib.linux-armv7l-cpython-311/flydra_core/kalman
2023-09-26T12:56:03,204   copying flydra_core/kalman/flydra_tracker.py -> build/lib.linux-armv7l-cpython-311/flydra_core/kalman
2023-09-26T12:56:03,206   copying flydra_core/kalman/flydra_kalman_utils.py -> build/lib.linux-armv7l-cpython-311/flydra_core/kalman
2023-09-26T12:56:03,209   copying flydra_core/kalman/__init__.py -> build/lib.linux-armv7l-cpython-311/flydra_core/kalman
2023-09-26T12:56:03,210   copying flydra_core/kalman/dynamic_models.py -> build/lib.linux-armv7l-cpython-311/flydra_core/kalman
2023-09-26T12:56:03,212   copying flydra_core/kalman/lsprofcalltree.py -> build/lib.linux-armv7l-cpython-311/flydra_core/kalman
2023-09-26T12:56:03,214   running egg_info
2023-09-26T12:56:03,218   writing flydra_core.egg-info/PKG-INFO
2023-09-26T12:56:03,220   writing dependency_links to flydra_core.egg-info/dependency_links.txt
2023-09-26T12:56:03,222   writing entry points to flydra_core.egg-info/entry_points.txt
2023-09-26T12:56:03,223   writing requirements to flydra_core.egg-info/requires.txt
2023-09-26T12:56:03,224   writing top-level names to flydra_core.egg-info/top_level.txt
2023-09-26T12:56:03,230   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_math.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,230   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,231   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,232   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,232   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,233   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,233   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,234   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,234   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,235   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,235   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,236   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,236   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,237   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,237   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,238   dependency /tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2023-09-26T12:56:03,238   reading manifest file 'flydra_core.egg-info/SOURCES.txt'
2023-09-26T12:56:03,241   reading manifest template 'MANIFEST.in'
2023-09-26T12:56:03,247   writing manifest file 'flydra_core.egg-info/SOURCES.txt'
2023-09-26T12:56:03,250   copying flydra_core/Roots3And4.c -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,253   copying flydra_core/Roots3And4.h -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,255   copying flydra_core/_Roots3And4.c -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,262   copying flydra_core/_Roots3And4.pxd -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,264   copying flydra_core/_Roots3And4.pyx -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,266   copying flydra_core/_fastgeom.c -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,275   copying flydra_core/_fastgeom.pxd -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,277   copying flydra_core/_fastgeom.pyx -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,279   copying flydra_core/_flydra_tracked_object.c -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,300   copying flydra_core/_flydra_tracked_object.pyx -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,302   copying flydra_core/_mahalanobis.c -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,309   copying flydra_core/_mahalanobis.pxd -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,311   copying flydra_core/_mahalanobis.pyx -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,313   copying flydra_core/_pmat_jacobian.c -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,324   copying flydra_core/_pmat_jacobian.pxd -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,326   copying flydra_core/_pmat_jacobian.pyx -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,328   copying flydra_core/_pmat_jacobian_water.c -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,341   copying flydra_core/_pmat_jacobian_water.pxd -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,342   copying flydra_core/_pmat_jacobian_water.pyx -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,344   copying flydra_core/_reconstruct_utils.c -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,360   copying flydra_core/_reconstruct_utils.pyx -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,363   copying flydra_core/_refraction.c -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,369   copying flydra_core/_refraction.pxd -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,371   copying flydra_core/_refraction.pyx -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,373   copying flydra_core/flydra_server_art.png -> build/lib.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,377   running build_ext
2023-09-26T12:56:03,383   building 'flydra_core._reconstruct_utils' extension
2023-09-26T12:56:03,384   creating build/temp.linux-armv7l-cpython-311
2023-09-26T12:56:03,385   creating build/temp.linux-armv7l-cpython-311/flydra_core
2023-09-26T12:56:03,386   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c flydra_core/_reconstruct_utils.c -o build/temp.linux-armv7l-cpython-311/flydra_core/_reconstruct_utils.o
2023-09-26T12:56:43,173   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/flydra_core/_reconstruct_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/flydra_core/_reconstruct_utils.cpython-311-arm-linux-gnueabihf.so
2023-09-26T12:56:43,311   building 'flydra_core._pmat_jacobian' extension
2023-09-26T12:56:43,312   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c flydra_core/_pmat_jacobian.c -o build/temp.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian.o
2023-09-26T12:56:52,507   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian.cpython-311-arm-linux-gnueabihf.so
2023-09-26T12:56:52,623   building 'flydra_core._pmat_jacobian_water' extension
2023-09-26T12:56:52,625   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c flydra_core/_pmat_jacobian_water.c -o build/temp.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian_water.o
2023-09-26T12:57:03,453   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian_water.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian_water.cpython-311-arm-linux-gnueabihf.so
2023-09-26T12:57:03,571   building 'flydra_core._flydra_tracked_object' extension
2023-09-26T12:57:03,572   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/tmp/pip-build-env-psk618y6/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c flydra_core/_flydra_tracked_object.c -o build/temp.linux-armv7l-cpython-311/flydra_core/_flydra_tracked_object.o
2023-09-26T12:57:52,550   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/flydra_core/_flydra_tracked_object.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/flydra_core/_flydra_tracked_object.cpython-311-arm-linux-gnueabihf.so
2023-09-26T12:57:52,702   building 'flydra_core._mahalanobis' extension
2023-09-26T12:57:52,702   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include/python3.11 -c flydra_core/_mahalanobis.c -o build/temp.linux-armv7l-cpython-311/flydra_core/_mahalanobis.o
2023-09-26T12:57:59,234   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/flydra_core/_mahalanobis.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/flydra_core/_mahalanobis.cpython-311-arm-linux-gnueabihf.so
2023-09-26T12:57:59,342   building 'flydra_core._fastgeom' extension
2023-09-26T12:57:59,342   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include/python3.11 -c flydra_core/_fastgeom.c -o build/temp.linux-armv7l-cpython-311/flydra_core/_fastgeom.o
2023-09-26T12:58:07,786   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/flydra_core/_fastgeom.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/flydra_core/_fastgeom.cpython-311-arm-linux-gnueabihf.so
2023-09-26T12:58:07,896   building 'flydra_core._Roots3And4' extension
2023-09-26T12:58:07,896   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -Iflydra_core -I/usr/include/python3.11 -c flydra_core/Roots3And4.c -o build/temp.linux-armv7l-cpython-311/flydra_core/Roots3And4.o
2023-09-26T12:58:08,170   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -Iflydra_core -I/usr/include/python3.11 -c flydra_core/_Roots3And4.c -o build/temp.linux-armv7l-cpython-311/flydra_core/_Roots3And4.o
2023-09-26T12:58:12,178   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/flydra_core/Roots3And4.o build/temp.linux-armv7l-cpython-311/flydra_core/_Roots3And4.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/flydra_core/_Roots3And4.cpython-311-arm-linux-gnueabihf.so
2023-09-26T12:58:12,282   building 'flydra_core._refraction' extension
2023-09-26T12:58:12,283   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -I/usr/include/python3.11 -c flydra_core/_refraction.c -o build/temp.linux-armv7l-cpython-311/flydra_core/_refraction.o
2023-09-26T12:58:15,611   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/flydra_core/_refraction.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/flydra_core/_refraction.cpython-311-arm-linux-gnueabihf.so
2023-09-26T12:58:15,721   installing to build/bdist.linux-armv7l/wheel
2023-09-26T12:58:15,722   running install
2023-09-26T12:58:15,745   running install_lib
2023-09-26T12:58:15,750   creating build/bdist.linux-armv7l
2023-09-26T12:58:15,751   creating build/bdist.linux-armv7l/wheel
2023-09-26T12:58:15,753   creating build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,754   copying build/lib.linux-armv7l-cpython-311/flydra_core/undistort.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,756   copying build/lib.linux-armv7l-cpython-311/flydra_core/_reconstruct_utils.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,774   copying build/lib.linux-armv7l-cpython-311/flydra_core/Roots3And4.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,776   copying build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,778   copying build/lib.linux-armv7l-cpython-311/flydra_core/_mahalanobis.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,780   copying build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian_water.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,782   copying build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,784   copying build/lib.linux-armv7l-cpython-311/flydra_core/__init__.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,785   copying build/lib.linux-armv7l-cpython-311/flydra_core/test_refraction.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,787   copying build/lib.linux-armv7l-cpython-311/flydra_core/_mahalanobis.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,796   copying build/lib.linux-armv7l-cpython-311/flydra_core/flydra_server_art.png -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,798   copying build/lib.linux-armv7l-cpython-311/flydra_core/_Roots3And4.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,808   copying build/lib.linux-armv7l-cpython-311/flydra_core/data_descriptions.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,810   creating build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-26T12:58:15,811   copying build/lib.linux-armv7l-cpython-311/flydra_core/kalman/point_prob.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-26T12:58:15,813   copying build/lib.linux-armv7l-cpython-311/flydra_core/kalman/ekf.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-26T12:58:15,815   copying build/lib.linux-armv7l-cpython-311/flydra_core/kalman/ori_smooth.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-26T12:58:15,817   copying build/lib.linux-armv7l-cpython-311/flydra_core/kalman/flydra_tracker.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-26T12:58:15,819   copying build/lib.linux-armv7l-cpython-311/flydra_core/kalman/flydra_kalman_utils.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-26T12:58:15,821   copying build/lib.linux-armv7l-cpython-311/flydra_core/kalman/__init__.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-26T12:58:15,823   copying build/lib.linux-armv7l-cpython-311/flydra_core/kalman/dynamic_models.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-26T12:58:15,826   copying build/lib.linux-armv7l-cpython-311/flydra_core/kalman/lsprofcalltree.py -> build/bdist.linux-armv7l/wheel/flydra_core/kalman
2023-09-26T12:58:15,828   copying build/lib.linux-armv7l-cpython-311/flydra_core/_refraction.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,834   copying build/lib.linux-armv7l-cpython-311/flydra_core/_refraction.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,840   copying build/lib.linux-armv7l-cpython-311/flydra_core/_reconstruct_utils.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,843   copying build/lib.linux-armv7l-cpython-311/flydra_core/debuglock.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,845   copying build/lib.linux-armv7l-cpython-311/flydra_core/_fastgeom.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,847   copying build/lib.linux-armv7l-cpython-311/flydra_core/water.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,849   copying build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,862   copying build/lib.linux-armv7l-cpython-311/flydra_core/_Roots3And4.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,867   copying build/lib.linux-armv7l-cpython-311/flydra_core/reconstruct.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,871   copying build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian_water.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,886   copying build/lib.linux-armv7l-cpython-311/flydra_core/_refraction.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,889   copying build/lib.linux-armv7l-cpython-311/flydra_core/_mahalanobis.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,891   copying build/lib.linux-armv7l-cpython-311/flydra_core/flydra_socket.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,893   copying build/lib.linux-armv7l-cpython-311/flydra_core/_mahalanobis.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,901   copying build/lib.linux-armv7l-cpython-311/flydra_core/common_variables.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,903   copying build/lib.linux-armv7l-cpython-311/flydra_core/geom.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,906   copying build/lib.linux-armv7l-cpython-311/flydra_core/_flydra_tracked_object.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,936   copying build/lib.linux-armv7l-cpython-311/flydra_core/_reconstruct_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,953   copying build/lib.linux-armv7l-cpython-311/flydra_core/_fastgeom.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,963   copying build/lib.linux-armv7l-cpython-311/flydra_core/_flydra_tracked_object.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,965   copying build/lib.linux-armv7l-cpython-311/flydra_core/_flydra_tracked_object.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:15,989   copying build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian_water.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,000   copying build/lib.linux-armv7l-cpython-311/flydra_core/_Roots3And4.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,002   copying build/lib.linux-armv7l-cpython-311/flydra_core/_refraction.pyx -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,003   copying build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian_water.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,005   copying build/lib.linux-armv7l-cpython-311/flydra_core/align.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,007   copying build/lib.linux-armv7l-cpython-311/flydra_core/_fastgeom.c -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,017   copying build/lib.linux-armv7l-cpython-311/flydra_core/_pmat_jacobian.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,025   copying build/lib.linux-armv7l-cpython-311/flydra_core/_Roots3And4.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,027   copying build/lib.linux-armv7l-cpython-311/flydra_core/_fastgeom.pxd -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,029   copying build/lib.linux-armv7l-cpython-311/flydra_core/Roots3And4.h -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,030   copying build/lib.linux-armv7l-cpython-311/flydra_core/version.py -> build/bdist.linux-armv7l/wheel/flydra_core
2023-09-26T12:58:16,032   running install_egg_info
2023-09-26T12:58:16,037   Copying flydra_core.egg-info to build/bdist.linux-armv7l/wheel/flydra_core-0.7.15-py3.11.egg-info
2023-09-26T12:58:16,048   running install_scripts
2023-09-26T12:58:16,110   creating build/bdist.linux-armv7l/wheel/flydra_core-0.7.15.dist-info/WHEEL
2023-09-26T12:58:16,113   creating '/tmp/pip-wheel-mb527qnm/.tmp-cdp7q1xi/flydra_core-0.7.15-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-09-26T12:58:16,118   adding 'flydra_core/Roots3And4.c'
2023-09-26T12:58:16,122   adding 'flydra_core/Roots3And4.h'
2023-09-26T12:58:16,166   adding 'flydra_core/_Roots3And4.c'
2023-09-26T12:58:16,220   adding 'flydra_core/_Roots3And4.cpython-311-arm-linux-gnueabihf.so'
2023-09-26T12:58:16,223   adding 'flydra_core/_Roots3And4.pxd'
2023-09-26T12:58:16,225   adding 'flydra_core/_Roots3And4.pyx'
2023-09-26T12:58:16,226   adding 'flydra_core/__init__.py'
2023-09-26T12:58:16,265   adding 'flydra_core/_fastgeom.c'
2023-09-26T12:58:16,355   adding 'flydra_core/_fastgeom.cpython-311-arm-linux-gnueabihf.so'
2023-09-26T12:58:16,359   adding 'flydra_core/_fastgeom.pxd'
2023-09-26T12:58:16,360   adding 'flydra_core/_fastgeom.pyx'
2023-09-26T12:58:16,457   adding 'flydra_core/_flydra_tracked_object.c'
2023-09-26T12:58:16,781   adding 'flydra_core/_flydra_tracked_object.cpython-311-arm-linux-gnueabihf.so'
2023-09-26T12:58:16,797   adding 'flydra_core/_flydra_tracked_object.pyx'
2023-09-26T12:58:16,827   adding 'flydra_core/_mahalanobis.c'
2023-09-26T12:58:16,896   adding 'flydra_core/_mahalanobis.cpython-311-arm-linux-gnueabihf.so'
2023-09-26T12:58:16,900   adding 'flydra_core/_mahalanobis.pxd'
2023-09-26T12:58:16,901   adding 'flydra_core/_mahalanobis.pyx'
2023-09-26T12:58:16,947   adding 'flydra_core/_pmat_jacobian.c'
2023-09-26T12:58:17,041   adding 'flydra_core/_pmat_jacobian.cpython-311-arm-linux-gnueabihf.so'
2023-09-26T12:58:17,046   adding 'flydra_core/_pmat_jacobian.pxd'
2023-09-26T12:58:17,048   adding 'flydra_core/_pmat_jacobian.pyx'
2023-09-26T12:58:17,100   adding 'flydra_core/_pmat_jacobian_water.c'
2023-09-26T12:58:17,211   adding 'flydra_core/_pmat_jacobian_water.cpython-311-arm-linux-gnueabihf.so'
2023-09-26T12:58:17,217   adding 'flydra_core/_pmat_jacobian_water.pxd'
2023-09-26T12:58:17,218   adding 'flydra_core/_pmat_jacobian_water.pyx'
2023-09-26T12:58:17,288   adding 'flydra_core/_reconstruct_utils.c'
2023-09-26T12:58:17,506   adding 'flydra_core/_reconstruct_utils.cpython-311-arm-linux-gnueabihf.so'
2023-09-26T12:58:17,517   adding 'flydra_core/_reconstruct_utils.pyx'
2023-09-26T12:58:17,540   adding 'flydra_core/_refraction.c'
2023-09-26T12:58:17,576   adding 'flydra_core/_refraction.cpython-311-arm-linux-gnueabihf.so'
2023-09-26T12:58:17,578   adding 'flydra_core/_refraction.pxd'
2023-09-26T12:58:17,580   adding 'flydra_core/_refraction.pyx'
2023-09-26T12:58:17,581   adding 'flydra_core/align.py'
2023-09-26T12:58:17,582   adding 'flydra_core/common_variables.py'
2023-09-26T12:58:17,584   adding 'flydra_core/data_descriptions.py'
2023-09-26T12:58:17,585   adding 'flydra_core/debuglock.py'
2023-09-26T12:58:17,587   adding 'flydra_core/flydra_server_art.png'
2023-09-26T12:58:17,589   adding 'flydra_core/flydra_socket.py'
2023-09-26T12:58:17,591   adding 'flydra_core/geom.py'
2023-09-26T12:58:17,601   adding 'flydra_core/reconstruct.py'
2023-09-26T12:58:17,603   adding 'flydra_core/test_refraction.py'
2023-09-26T12:58:17,605   adding 'flydra_core/undistort.py'
2023-09-26T12:58:17,606   adding 'flydra_core/version.py'
2023-09-26T12:58:17,607   adding 'flydra_core/water.py'
2023-09-26T12:58:17,609   adding 'flydra_core/kalman/__init__.py'
2023-09-26T12:58:17,611   adding 'flydra_core/kalman/dynamic_models.py'
2023-09-26T12:58:17,613   adding 'flydra_core/kalman/ekf.py'
2023-09-26T12:58:17,614   adding 'flydra_core/kalman/flydra_kalman_utils.py'
2023-09-26T12:58:17,616   adding 'flydra_core/kalman/flydra_tracker.py'
2023-09-26T12:58:17,617   adding 'flydra_core/kalman/lsprofcalltree.py'
2023-09-26T12:58:17,619   adding 'flydra_core/kalman/ori_smooth.py'
2023-09-26T12:58:17,620   adding 'flydra_core/kalman/point_prob.py'
2023-09-26T12:58:17,622   adding 'flydra_core-0.7.15.dist-info/METADATA'
2023-09-26T12:58:17,623   adding 'flydra_core-0.7.15.dist-info/WHEEL'
2023-09-26T12:58:17,624   adding 'flydra_core-0.7.15.dist-info/entry_points.txt'
2023-09-26T12:58:17,624   adding 'flydra_core-0.7.15.dist-info/top_level.txt'
2023-09-26T12:58:17,626   adding 'flydra_core-0.7.15.dist-info/RECORD'
2023-09-26T12:58:17,669   removing build/bdist.linux-armv7l/wheel
2023-09-26T12:58:17,871   Building wheel for flydra-core (pyproject.toml): finished with status 'done'
2023-09-26T12:58:17,942   Created wheel for flydra-core: filename=flydra_core-0.7.15-cp311-cp311-linux_armv7l.whl size=2631969 sha256=61f9e1e35844cd48d72f7eb595a701a228b53e0cbbe0c403bf7cc570d168e5e0
2023-09-26T12:58:17,944   Stored in directory: /tmp/pip-ephem-wheel-cache-s6qoa9mr/wheels/a5/12/37/844571916a6df02218e55c6e71aa7bde6137e45b6358ade143
2023-09-26T12:58:17,957 Successfully built flydra-core
2023-09-26T12:58:18,030 Removed build tracker: '/tmp/pip-build-tracker-qnd29wob'