2023-10-09T02:34:35,398 Created temporary directory: /tmp/pip-build-tracker-6dm2j8n7
2023-10-09T02:34:35,399 Initialized build tracking at /tmp/pip-build-tracker-6dm2j8n7
2023-10-09T02:34:35,400 Created build tracker: /tmp/pip-build-tracker-6dm2j8n7
2023-10-09T02:34:35,400 Entered build tracker: /tmp/pip-build-tracker-6dm2j8n7
2023-10-09T02:34:35,401 Created temporary directory: /tmp/pip-wheel-agl4ub0a
2023-10-09T02:34:35,405 Created temporary directory: /tmp/pip-ephem-wheel-cache-j6kcgoww
2023-10-09T02:34:35,427 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-09T02:34:35,431 2 location(s) to search for versions of bioregistry:
2023-10-09T02:34:35,431 * https://pypi.org/simple/bioregistry/
2023-10-09T02:34:35,431 * https://www.piwheels.org/simple/bioregistry/
2023-10-09T02:34:35,431 Fetching project page and analyzing links: https://pypi.org/simple/bioregistry/
2023-10-09T02:34:35,432 Getting page https://pypi.org/simple/bioregistry/
2023-10-09T02:34:35,434 Found index url https://pypi.org/simple/
2023-10-09T02:34:35,708 Fetched page https://pypi.org/simple/bioregistry/ as application/vnd.pypi.simple.v1+json
2023-10-09T02:34:35,918   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/db/d0/a86cdecb48587601a85457f553bb400d6c26b8dd9526c7cee613f9a11acc/bioregistry-0.0.1-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,919   Found link https://files.pythonhosted.org/packages/36/70/31f7d80ee4f06918575944c9f52d80105e9b66930a0987706e573b09d2be/bioregistry-0.0.1.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.1
2023-10-09T02:34:35,920   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/33/f0/69edff7c26432308a6af2dbc37e90d95e5e4c7214483a5d55da5914f9892/bioregistry-0.0.2-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,921   Found link https://files.pythonhosted.org/packages/53/9f/3d53a810eca4eaa1e06a19fd7c0b73afa136d9c33033f34a054d49c2ee1e/bioregistry-0.0.2.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.2
2023-10-09T02:34:35,922   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/88/c6/f5b5b52f70123168d10204476c67ed71c3e3584cd435c3f7c73e9110c22a/bioregistry-0.0.3-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,923   Found link https://files.pythonhosted.org/packages/a5/2c/ff9fcdeb64a388433e8b9f41526e01bfc8a0c372a9be14569943d5d1ed2f/bioregistry-0.0.3.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.3
2023-10-09T02:34:35,923   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/99/4f/607f55c05934f3501225342c0e731d6aae0bda95bbdb3269f58a8906248c/bioregistry-0.0.4-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,925   Found link https://files.pythonhosted.org/packages/2d/08/279d3362c072d2b0334e487c8744b43c21d1ee4ea1cdf80411cd86faf166/bioregistry-0.0.4.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.4
2023-10-09T02:34:35,925   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/6d/9e/35c26e9cdd969610cacb1f3da0cd68b6910b248768a42fa6bc8b0179c43a/bioregistry-0.0.5-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,926   Found link https://files.pythonhosted.org/packages/a0/29/d6c230ae2af0105eb5aeb5b28d9416b1a19cee384ee38b70f519251835cb/bioregistry-0.0.5.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.5
2023-10-09T02:34:35,927   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/38/b7/d9d188a5f954ec1f1953977b02d1d4fece2b295cb17d93c4489363911125/bioregistry-0.0.6-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,928   Found link https://files.pythonhosted.org/packages/7c/1b/0eadaa8beac6831b83610be35085c11fd0a4c52ab5a9440d8b04d9ad9e61/bioregistry-0.0.6.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.6
2023-10-09T02:34:35,929   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/3f/12/2c0213fab1b8fd32f92bb2eda247622b34b710f70b39370e7ff2511ab0f4/bioregistry-0.0.7-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,930   Found link https://files.pythonhosted.org/packages/b5/30/56eb1e6c8b062cdaaf083876543b253b0613aca8ce8f29aa7a8ba4c82b40/bioregistry-0.0.7.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.7
2023-10-09T02:34:35,930   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/a2/e5/2a1313c2edee567ee035d0cac426f305e233fe1646194ae1426651f6b607/bioregistry-0.0.8-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,931   Found link https://files.pythonhosted.org/packages/33/44/399726b77275c201a407380d221b32e16bc1ecae0e2dd66ccaabb7e70bee/bioregistry-0.0.8.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.8
2023-10-09T02:34:35,932   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/2c/5e/b89ead247c5d1b046145f30df37222c2e8553a3e873cad6f6baecb182acb/bioregistry-0.0.9-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,933   Found link https://files.pythonhosted.org/packages/6e/fa/29a216e3f76739a20a4e830734a9522335a387b727fc32ee352a58ff082c/bioregistry-0.0.9.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.9
2023-10-09T02:34:35,934   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/c1/2c/2567e1fd36e60d2b2593858d8c66f4ea84fe0b890b4e62c3c446c92e7e21/bioregistry-0.0.10-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,934   Found link https://files.pythonhosted.org/packages/1e/09/d482652a82c4ebe06f5563d252851ef67a885a2d11b289cbadfb20f198b8/bioregistry-0.0.10.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.10
2023-10-09T02:34:35,935   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/9e/fe/2afa00eb68d5642640b3ef154a86590226f859116a285c8330fa89031618/bioregistry-0.0.11-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,936   Found link https://files.pythonhosted.org/packages/d6/b5/46378045149e007d639df041aa424db188dd69b824fa55ed4c434b54255e/bioregistry-0.0.11.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.11
2023-10-09T02:34:35,937   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/d4/78/d10400c07b62141aa746414ef566566cb052f679ce0d89bcc71c883bc500/bioregistry-0.0.12-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,938   Found link https://files.pythonhosted.org/packages/4d/0e/65ffd3e65c09dbd4a3643f1e2dbb02c7529649b30a846cb75bb776ec2f24/bioregistry-0.0.12.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.12
2023-10-09T02:34:35,939   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/48/46/2e4e7d1aaebc662e5dda7e57e4b86521ce9de37bb913cbfcf433a05f8ff9/bioregistry-0.0.13-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,940   Found link https://files.pythonhosted.org/packages/24/e5/02b34e5b7210a5700e840d3e034f07dc348ff0bbb83ea0da1787aa0344f3/bioregistry-0.0.13.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.13
2023-10-09T02:34:35,941   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/e3/91/1b0be1c988507b0cae755541e7c82b5f6258d3e8f33966561bf7ea1b6817/bioregistry-0.0.14-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,942   Found link https://files.pythonhosted.org/packages/a6/97/0bce92fb9f28bb7f96c77ada034ec52b8869c8fb603abf64fb478299a489/bioregistry-0.0.14.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.0.14
2023-10-09T02:34:35,942   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/56/24/730665d5fa23805d26374a2e373648fafcfdd61ae6ee424289d35aa9518d/bioregistry-0.1.0-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,943   Found link https://files.pythonhosted.org/packages/54/d3/c19c098d74a5752b38961501aa740e60e085ebcad4c00984b929bf9076dc/bioregistry-0.1.0.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.0
2023-10-09T02:34:35,944   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/9f/0b/f98abff4757447d1ddf300a9fad86d77864e012f5db5fa671084c0360881/bioregistry-0.1.1-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,945   Found link https://files.pythonhosted.org/packages/49/32/2b6a7ad4c3f4d16355a8ccb597bccbd7e1c5d0d98e0ee5f64d887ef5c67a/bioregistry-0.1.1.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.1
2023-10-09T02:34:35,945   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/31/c7/7d10449c2c54167462c9202de08480904c35135fe2748cd2e9d11072f0c7/bioregistry-0.1.2-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,946   Found link https://files.pythonhosted.org/packages/c2/d6/0ca9a35d26d8cd3567b3a6868c79383bdf7b52b6ffac6d0a1d839141e1fe/bioregistry-0.1.2.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.2
2023-10-09T02:34:35,947   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/eb/71/acfc3f2a0493365bd36b97640b4341368e21011327f28351a69b8bc8632d/bioregistry-0.1.3-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,948   Found link https://files.pythonhosted.org/packages/71/b1/c415de81e06c7927031dc1d2c6d05d838d584f387d5566fe6f8d4b905561/bioregistry-0.1.3.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.3
2023-10-09T02:34:35,949   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/f6/ae/536f6adcd851e6a8da45e169a76f59347115b8c74af84f9148ec3e17eb18/bioregistry-0.1.4-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,950   Found link https://files.pythonhosted.org/packages/1a/6e/3793292d15ee8b4cbd8163b7ea7b3ec31ee5a2c37ede323217c23cdaa3a4/bioregistry-0.1.4.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.4
2023-10-09T02:34:35,950   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/35/47/29dd714e524c5249303f41cf336f7ed5e1e072ec031beaf604e252e71017/bioregistry-0.1.5-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,951   Found link https://files.pythonhosted.org/packages/ce/89/5cccef7ccf8203b29551e6c63be37f6857ea93b25c4321e30f29c4a69048/bioregistry-0.1.5.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.5
2023-10-09T02:34:35,952   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/8f/5a/30427825b75d7766d4ba54374c560aaff59662ce588359d2542305ccd2a9/bioregistry-0.1.6-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,953   Found link https://files.pythonhosted.org/packages/09/72/b4d225028f96424238f583b03591b68be5b3b9476e6a996095eb4b2ea39b/bioregistry-0.1.6.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.6
2023-10-09T02:34:35,954   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/21/1b/9d6d299479a161b3ee19d30b02f6a57c736aae0b4e7ea315f74cefb5445f/bioregistry-0.1.7-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,955   Found link https://files.pythonhosted.org/packages/af/d8/cdb3b90ad4dbf27bf21c8c2d06a6fbace7e8fe3baa536347b3fb15e4daed/bioregistry-0.1.7.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.7
2023-10-09T02:34:35,956   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/15/6f/7dfd5e88e069d2762eafbd50e5e6f068e6656f6881a6d6aac47c34cd3146/bioregistry-0.1.8-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,957   Found link https://files.pythonhosted.org/packages/05/0d/aea63061a1f3f93ffac01711adc3178bd0c9c065743527b9081024438368/bioregistry-0.1.8.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.8
2023-10-09T02:34:35,957   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/08/02/b85ab79250906fa35e0752589a5ccefa3e75938fa503c82b7fd89115b1df/bioregistry-0.1.9-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,958   Found link https://files.pythonhosted.org/packages/50/cf/860d63bb3fcd00abfc06a4500aa40bfd1a2695ede13585685739aefa73c2/bioregistry-0.1.9.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.1.9
2023-10-09T02:34:35,959   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/c6/54/f582accc27eed19f87a10fdc3360702d643227a5bd32183939ea668932e2/bioregistry-0.1.10-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
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2023-10-09T02:34:35,961   Skipping link: No binaries permitted for bioregistry: https://files.pythonhosted.org/packages/d0/ae/404d855f40924636dc55ae7c8673ffc1e7bd4df8942d470ae27bad730ac3/bioregistry-0.2.0-py3-none-any.whl (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:35,962   Found link https://files.pythonhosted.org/packages/51/10/ea3446155e127bac11694cb2d28c33beedbdb3ad582afacc20dad10e9a2a/bioregistry-0.2.0.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.2.0
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2023-10-09T02:34:35,964   Found link https://files.pythonhosted.org/packages/31/b1/8c805e83104e95b69170407d8269c9eab22a4db357657745c8c0f55e5228/bioregistry-0.2.1.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.2.1
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2023-10-09T02:34:35,965   Found link https://files.pythonhosted.org/packages/7b/dd/1bb41e83c871a7811dd6700ebd4cce3fced0b8d18e77cb311f72900aca54/bioregistry-0.2.2.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.6), version: 0.2.2
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2023-10-09T02:34:36,939   Found link https://files.pythonhosted.org/packages/16/6c/d17d91eb44ebb3c99f05b5a490c283c59c6e5a0b5badb06d8cc15f472117/bioregistry-0.10.53.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.8), version: 0.10.53
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2023-10-09T02:34:36,941   Found link https://files.pythonhosted.org/packages/e1/6f/359afdfecf194fe8ca712dc96480ea76df35ea3414920db31c0f71c15840/bioregistry-0.10.54.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.8), version: 0.10.54
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2023-10-09T02:34:36,943   Found link https://files.pythonhosted.org/packages/2f/39/0d5782fd9209d7ec2fcaab87bfe659a45e0bda607ba46913a595130e4997/bioregistry-0.10.55.tar.gz (from https://pypi.org/simple/bioregistry/) (requires-python:>=3.8), version: 0.10.55
2023-10-09T02:34:36,944 Fetching project page and analyzing links: https://www.piwheels.org/simple/bioregistry/
2023-10-09T02:34:36,945 Getting page https://www.piwheels.org/simple/bioregistry/
2023-10-09T02:34:36,946 Found index url https://www.piwheels.org/simple/
2023-10-09T02:34:37,126 Fetched page https://www.piwheels.org/simple/bioregistry/ as text/html
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2023-10-09T02:34:37,647   Skipping link: No binaries permitted for bioregistry: https://www.piwheels.org/simple/bioregistry/bioregistry-0.0.14-py3-none-any.whl#sha256=89a30aed7b1623a383ae2256a1a1e307005660938896586b3d6029a8dd19371f (from https://www.piwheels.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:37,648   Skipping link: No binaries permitted for bioregistry: https://www.piwheels.org/simple/bioregistry/bioregistry-0.0.13-py3-none-any.whl#sha256=ad6e3265fdb2249e28ddc86e75ed43f9c268767f38bbb81b94af1baeb1626f89 (from https://www.piwheels.org/simple/bioregistry/) (requires-python:>=3.6)
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2023-10-09T02:34:37,654   Skipping link: No binaries permitted for bioregistry: https://www.piwheels.org/simple/bioregistry/bioregistry-0.0.3-py3-none-any.whl#sha256=678f2378148449c83d703e7e19c5ec1d55220be9389e2d1dec01ca3bb5ea019e (from https://www.piwheels.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:37,654   Skipping link: No binaries permitted for bioregistry: https://www.piwheels.org/simple/bioregistry/bioregistry-0.0.2-py3-none-any.whl#sha256=07796da08e66a6131fa55dbf495bfb739245686d5471099671a0bf9acfc53e68 (from https://www.piwheels.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:37,655   Skipping link: No binaries permitted for bioregistry: https://www.piwheels.org/simple/bioregistry/bioregistry-0.0.1-py3-none-any.whl#sha256=0a5c5c592b5ce79fd3eb3b5dc337d4f8fc95782bb9faad2bee080de0a924a002 (from https://www.piwheels.org/simple/bioregistry/) (requires-python:>=3.6)
2023-10-09T02:34:37,655 Skipping link: not a file: https://www.piwheels.org/simple/bioregistry/
2023-10-09T02:34:37,656 Skipping link: not a file: https://pypi.org/simple/bioregistry/
2023-10-09T02:34:37,751 Given no hashes to check 1 links for project 'bioregistry': discarding no candidates
2023-10-09T02:34:37,772 Collecting bioregistry==0.10.55
2023-10-09T02:34:37,774   Created temporary directory: /tmp/pip-unpack-p79z_5x4
2023-10-09T02:34:37,995   Downloading bioregistry-0.10.55.tar.gz (10.9 MB)
2023-10-09T02:34:42,224   Added bioregistry==0.10.55 from https://files.pythonhosted.org/packages/2f/39/0d5782fd9209d7ec2fcaab87bfe659a45e0bda607ba46913a595130e4997/bioregistry-0.10.55.tar.gz to build tracker '/tmp/pip-build-tracker-6dm2j8n7'
2023-10-09T02:34:42,229   Created temporary directory: /tmp/pip-build-env-qmag2v77
2023-10-09T02:34:42,234   Installing build dependencies: started
2023-10-09T02:34:42,235   Running command pip subprocess to install build dependencies
2023-10-09T02:34:43,369   Using pip 23.2.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-10-09T02:34:43,871   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-10-09T02:34:45,417   Collecting setuptools
2023-10-09T02:34:45,483     Using cached https://www.piwheels.org/simple/setuptools/setuptools-68.2.2-py3-none-any.whl (807 kB)
2023-10-09T02:34:45,714   Collecting wheel
2023-10-09T02:34:45,730     Using cached https://www.piwheels.org/simple/wheel/wheel-0.41.2-py3-none-any.whl (64 kB)
2023-10-09T02:34:48,290   Installing collected packages: wheel, setuptools
2023-10-09T02:34:48,516     Creating /tmp/pip-build-env-qmag2v77/overlay/local/bin
2023-10-09T02:34:48,518     changing mode of /tmp/pip-build-env-qmag2v77/overlay/local/bin/wheel to 755
2023-10-09T02:34:50,991   Successfully installed setuptools-68.2.2 wheel-0.41.2
2023-10-09T02:34:51,546   Installing build dependencies: finished with status 'done'
2023-10-09T02:34:51,549   Getting requirements to build wheel: started
2023-10-09T02:34:51,551   Running command Getting requirements to build wheel
2023-10-09T02:34:52,248   running egg_info
2023-10-09T02:34:52,252   writing src/bioregistry.egg-info/PKG-INFO
2023-10-09T02:34:52,269   writing dependency_links to src/bioregistry.egg-info/dependency_links.txt
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2023-10-09T02:34:52,438   adding license file 'LICENSE'
2023-10-09T02:34:52,453   writing manifest file 'src/bioregistry.egg-info/SOURCES.txt'
2023-10-09T02:34:52,531   Getting requirements to build wheel: finished with status 'done'
2023-10-09T02:34:52,542   Created temporary directory: /tmp/pip-modern-metadata-7gjsdtbq
2023-10-09T02:34:52,544   Preparing metadata (pyproject.toml): started
2023-10-09T02:34:52,546   Running command Preparing metadata (pyproject.toml)
2023-10-09T02:34:53,103   running dist_info
2023-10-09T02:34:53,121   creating /tmp/pip-modern-metadata-7gjsdtbq/bioregistry.egg-info
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2023-10-09T02:34:53,147   writing entry points to /tmp/pip-modern-metadata-7gjsdtbq/bioregistry.egg-info/entry_points.txt
2023-10-09T02:34:53,154   writing requirements to /tmp/pip-modern-metadata-7gjsdtbq/bioregistry.egg-info/requires.txt
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2023-10-09T02:34:53,186   reading manifest template 'MANIFEST.in'
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2023-10-09T02:34:53,266   warning: no files found matching '*.rst'
2023-10-09T02:34:53,266   adding license file 'LICENSE'
2023-10-09T02:34:53,278   writing manifest file '/tmp/pip-modern-metadata-7gjsdtbq/bioregistry.egg-info/SOURCES.txt'
2023-10-09T02:34:53,279   creating '/tmp/pip-modern-metadata-7gjsdtbq/bioregistry-0.10.55.dist-info'
2023-10-09T02:34:53,475   Preparing metadata (pyproject.toml): finished with status 'done'
2023-10-09T02:34:53,482   Source in /tmp/pip-wheel-agl4ub0a/bioregistry_0997e2407250481d8e0b6768098d5405 has version 0.10.55, which satisfies requirement bioregistry==0.10.55 from https://files.pythonhosted.org/packages/2f/39/0d5782fd9209d7ec2fcaab87bfe659a45e0bda607ba46913a595130e4997/bioregistry-0.10.55.tar.gz
2023-10-09T02:34:53,483   Removed bioregistry==0.10.55 from https://files.pythonhosted.org/packages/2f/39/0d5782fd9209d7ec2fcaab87bfe659a45e0bda607ba46913a595130e4997/bioregistry-0.10.55.tar.gz from build tracker '/tmp/pip-build-tracker-6dm2j8n7'
2023-10-09T02:34:53,493 Created temporary directory: /tmp/pip-unpack-24dli8tb
2023-10-09T02:34:53,494 Created temporary directory: /tmp/pip-unpack-tdi22cgo
2023-10-09T02:34:53,612 Building wheels for collected packages: bioregistry
2023-10-09T02:34:53,617   Created temporary directory: /tmp/pip-wheel-brlrgkf2
2023-10-09T02:34:53,617   Destination directory: /tmp/pip-wheel-brlrgkf2
2023-10-09T02:34:53,620   Building wheel for bioregistry (pyproject.toml): started
2023-10-09T02:34:53,621   Running command Building wheel for bioregistry (pyproject.toml)
2023-10-09T02:34:54,228   running bdist_wheel
2023-10-09T02:34:54,269   running build
2023-10-09T02:34:54,270   running build_py
2023-10-09T02:34:54,277   creating build
2023-10-09T02:34:54,278   creating build/lib
2023-10-09T02:34:54,278   creating build/lib/bioregistry
2023-10-09T02:34:54,280   copying src/bioregistry/constants.py -> build/lib/bioregistry
2023-10-09T02:34:54,282   copying src/bioregistry/__init__.py -> build/lib/bioregistry
2023-10-09T02:34:54,284   copying src/bioregistry/uri_format.py -> build/lib/bioregistry
2023-10-09T02:34:54,287   copying src/bioregistry/cli.py -> build/lib/bioregistry
2023-10-09T02:34:54,289   copying src/bioregistry/record_accumulator.py -> build/lib/bioregistry
2023-10-09T02:34:54,291   copying src/bioregistry/summary.py -> build/lib/bioregistry
2023-10-09T02:34:54,293   copying src/bioregistry/utils.py -> build/lib/bioregistry
2023-10-09T02:34:54,296   copying src/bioregistry/lint.py -> build/lib/bioregistry
2023-10-09T02:34:54,297   copying src/bioregistry/parse_version_iri.py -> build/lib/bioregistry
2023-10-09T02:34:54,299   copying src/bioregistry/pandas.py -> build/lib/bioregistry
2023-10-09T02:34:54,302   copying src/bioregistry/resource_manager.py -> build/lib/bioregistry
2023-10-09T02:34:54,305   copying src/bioregistry/collection_api.py -> build/lib/bioregistry
2023-10-09T02:34:54,307   copying src/bioregistry/bibliometrics.py -> build/lib/bioregistry
2023-10-09T02:34:54,309   copying src/bioregistry/resolve_identifier.py -> build/lib/bioregistry
2023-10-09T02:34:54,311   copying src/bioregistry/metaresource_api.py -> build/lib/bioregistry
2023-10-09T02:34:54,313   copying src/bioregistry/resolve.py -> build/lib/bioregistry
2023-10-09T02:34:54,316   copying src/bioregistry/compare.py -> build/lib/bioregistry
2023-10-09T02:34:54,319   copying src/bioregistry/license_standardizer.py -> build/lib/bioregistry
2023-10-09T02:34:54,321   copying src/bioregistry/__main__.py -> build/lib/bioregistry
2023-10-09T02:34:54,323   copying src/bioregistry/schema_utils.py -> build/lib/bioregistry
2023-10-09T02:34:54,325   copying src/bioregistry/version.py -> build/lib/bioregistry
2023-10-09T02:34:54,327   copying src/bioregistry/parse_iri.py -> build/lib/bioregistry
2023-10-09T02:34:54,329   copying src/bioregistry/upload_ndex.py -> build/lib/bioregistry
2023-10-09T02:34:54,332   creating build/lib/bioregistry/data
2023-10-09T02:34:54,333   copying src/bioregistry/data/__init__.py -> build/lib/bioregistry/data
2023-10-09T02:34:54,336   creating build/lib/bioregistry/curation
2023-10-09T02:34:54,337   copying src/bioregistry/curation/__init__.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,338   copying src/bioregistry/curation/suggest_author_curation.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,340   copying src/bioregistry/curation/clean_name_suffixes.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,342   copying src/bioregistry/curation/import_pc_semiautomatic.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,343   copying src/bioregistry/curation/map_bartoc_via_wikidata.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,345   copying src/bioregistry/curation/add_descriptions_from_gs.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,347   copying src/bioregistry/curation/suggest_uniprot_providers.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,348   copying src/bioregistry/curation/add_examples.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,350   copying src/bioregistry/curation/enrich_publications.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,352   copying src/bioregistry/curation/add_examples_from_ols.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,354   copying src/bioregistry/curation/clean_publications.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,356   copying src/bioregistry/curation/deprecation_diff.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,357   copying src/bioregistry/curation/map_re3data_via_fairsharing.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,359   copying src/bioregistry/curation/add_co_providers.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,361   copying src/bioregistry/curation/review_pc.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,363   copying src/bioregistry/curation/bulk_import.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,364   copying src/bioregistry/curation/cleanup_authors.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,366   copying src/bioregistry/curation/fix_obo_purls.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,368   copying src/bioregistry/curation/clean_licenses.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,370   copying src/bioregistry/curation/add_examples_from_javert.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,371   copying src/bioregistry/curation/rename_metaprefix.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,373   copying src/bioregistry/curation/add_ontology_regexes.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,375   copying src/bioregistry/curation/make_description_curation_sheet.py -> build/lib/bioregistry/curation
2023-10-09T02:34:54,377   creating build/lib/bioregistry/schema
2023-10-09T02:34:54,378   copying src/bioregistry/schema/constants.py -> build/lib/bioregistry/schema
2023-10-09T02:34:54,381   copying src/bioregistry/schema/__init__.py -> build/lib/bioregistry/schema
2023-10-09T02:34:54,382   copying src/bioregistry/schema/utils.py -> build/lib/bioregistry/schema
2023-10-09T02:34:54,384   copying src/bioregistry/schema/struct.py -> build/lib/bioregistry/schema
2023-10-09T02:34:54,389   creating build/lib/bioregistry/align
2023-10-09T02:34:54,390   copying src/bioregistry/align/__init__.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,392   copying src/bioregistry/align/ecoportal.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,394   copying src/bioregistry/align/bartoc.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,396   copying src/bioregistry/align/rrid.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,397   copying src/bioregistry/align/miriam.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,399   copying src/bioregistry/align/bioportal.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,401   copying src/bioregistry/align/wikidata.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,403   copying src/bioregistry/align/fairsharing.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,404   copying src/bioregistry/align/utils.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,407   copying src/bioregistry/align/uniprot.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,409   copying src/bioregistry/align/edam.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,410   copying src/bioregistry/align/re3data.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,412   copying src/bioregistry/align/obofoundry.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,414   copying src/bioregistry/align/ols.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,415   copying src/bioregistry/align/biolink.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,417   copying src/bioregistry/align/prefixcommons.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,419   copying src/bioregistry/align/cropoct.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,420   copying src/bioregistry/align/n2t.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,422   copying src/bioregistry/align/biocontext.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,424   copying src/bioregistry/align/ontobee.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,426   copying src/bioregistry/align/agroportal.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,427   copying src/bioregistry/align/cheminf.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,429   copying src/bioregistry/align/go.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,431   copying src/bioregistry/align/hl7.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,433   copying src/bioregistry/align/ncbi.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,434   copying src/bioregistry/align/cellosaurus.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,436   copying src/bioregistry/align/aberowl.py -> build/lib/bioregistry/align
2023-10-09T02:34:54,438   creating build/lib/bioregistry/gh
2023-10-09T02:34:54,439   copying src/bioregistry/gh/__init__.py -> build/lib/bioregistry/gh
2023-10-09T02:34:54,441   copying src/bioregistry/gh/new_prefix.py -> build/lib/bioregistry/gh
2023-10-09T02:34:54,443   copying src/bioregistry/gh/github_client.py -> build/lib/bioregistry/gh
2023-10-09T02:34:54,446   creating build/lib/bioregistry/health
2023-10-09T02:34:54,447   copying src/bioregistry/health/__init__.py -> build/lib/bioregistry/health
2023-10-09T02:34:54,449   copying src/bioregistry/health/cli.py -> build/lib/bioregistry/health
2023-10-09T02:34:54,451   copying src/bioregistry/health/check_homepages.py -> build/lib/bioregistry/health
2023-10-09T02:34:54,452   copying src/bioregistry/health/check_providers.py -> build/lib/bioregistry/health
2023-10-09T02:34:54,455   copying src/bioregistry/health/__main__.py -> build/lib/bioregistry/health
2023-10-09T02:34:54,457   creating build/lib/bioregistry/benchmarks
2023-10-09T02:34:54,458   copying src/bioregistry/benchmarks/__init__.py -> build/lib/bioregistry/benchmarks
2023-10-09T02:34:54,460   copying src/bioregistry/benchmarks/cli.py -> build/lib/bioregistry/benchmarks
2023-10-09T02:34:54,462   copying src/bioregistry/benchmarks/curie_validation.py -> build/lib/bioregistry/benchmarks
2023-10-09T02:34:54,464   copying src/bioregistry/benchmarks/uri_parsing.py -> build/lib/bioregistry/benchmarks
2023-10-09T02:34:54,466   copying src/bioregistry/benchmarks/__main__.py -> build/lib/bioregistry/benchmarks
2023-10-09T02:34:54,468   copying src/bioregistry/benchmarks/curie_parsing.py -> build/lib/bioregistry/benchmarks
2023-10-09T02:34:54,470   creating build/lib/bioregistry/analysis
2023-10-09T02:34:54,471   copying src/bioregistry/analysis/__init__.py -> build/lib/bioregistry/analysis
2023-10-09T02:34:54,473   copying src/bioregistry/analysis/title_tfidf.py -> build/lib/bioregistry/analysis
2023-10-09T02:34:54,476   creating build/lib/bioregistry/external
2023-10-09T02:34:54,477   copying src/bioregistry/external/__init__.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,479   copying src/bioregistry/external/bartoc.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,481   copying src/bioregistry/external/miriam.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,483   copying src/bioregistry/external/bioportal.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,485   copying src/bioregistry/external/wikidata.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,487   copying src/bioregistry/external/fairsharing.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,489   copying src/bioregistry/external/uniprot.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,491   copying src/bioregistry/external/edam.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,493   copying src/bioregistry/external/re3data.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,495   copying src/bioregistry/external/obofoundry.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,497   copying src/bioregistry/external/ols.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,500   copying src/bioregistry/external/biolink.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,502   copying src/bioregistry/external/prefixcommons.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,504   copying src/bioregistry/external/cropoct.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,506   copying src/bioregistry/external/n2t.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,507   copying src/bioregistry/external/biocontext.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,509   copying src/bioregistry/external/ontobee.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,511   copying src/bioregistry/external/cheminf.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,513   copying src/bioregistry/external/go.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,514   copying src/bioregistry/external/ncbi.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,516   copying src/bioregistry/external/cellosaurus.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,518   copying src/bioregistry/external/aberowl.py -> build/lib/bioregistry/external
2023-10-09T02:34:54,521   creating build/lib/bioregistry/export
2023-10-09T02:34:54,521   copying src/bioregistry/export/__init__.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,524   copying src/bioregistry/export/cli.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,525   copying src/bioregistry/export/prefix_maps.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,527   copying src/bioregistry/export/warnings_export.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,530   copying src/bioregistry/export/yaml_export.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,531   copying src/bioregistry/export/rdf_export.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,534   copying src/bioregistry/export/schema_export.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,535   copying src/bioregistry/export/sssom_export.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,537   copying src/bioregistry/export/__main__.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,539   copying src/bioregistry/export/tables_export.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,542   copying src/bioregistry/export/tsv_export.py -> build/lib/bioregistry/export
2023-10-09T02:34:54,545   creating build/lib/bioregistry/app
2023-10-09T02:34:54,546   copying src/bioregistry/app/constants.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,548   copying src/bioregistry/app/__init__.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,550   copying src/bioregistry/app/cli.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,552   copying src/bioregistry/app/utils.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,555   copying src/bioregistry/app/test.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,557   copying src/bioregistry/app/proxies.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,559   copying src/bioregistry/app/ui.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,562   copying src/bioregistry/app/api.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,565   copying src/bioregistry/app/impl.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,567   copying src/bioregistry/app/wsgi.py -> build/lib/bioregistry/app
2023-10-09T02:34:54,570   creating build/lib/bioregistry/external/scicrunch
2023-10-09T02:34:54,571   copying src/bioregistry/external/scicrunch/__init__.py -> build/lib/bioregistry/external/scicrunch
2023-10-09T02:34:54,574   creating build/lib/bioregistry/external/hl7
2023-10-09T02:34:54,575   copying src/bioregistry/external/hl7/__init__.py -> build/lib/bioregistry/external/hl7
2023-10-09T02:34:54,577   running egg_info
2023-10-09T02:34:54,581   writing src/bioregistry.egg-info/PKG-INFO
2023-10-09T02:34:54,598   writing dependency_links to src/bioregistry.egg-info/dependency_links.txt
2023-10-09T02:34:54,600   writing entry points to src/bioregistry.egg-info/entry_points.txt
2023-10-09T02:34:54,607   writing requirements to src/bioregistry.egg-info/requires.txt
2023-10-09T02:34:54,609   writing top-level names to src/bioregistry.egg-info/top_level.txt
2023-10-09T02:34:54,626   reading manifest file 'src/bioregistry.egg-info/SOURCES.txt'
2023-10-09T02:34:54,634   reading manifest template 'MANIFEST.in'
2023-10-09T02:34:54,685   warning: no files found matching 'Makefile' under directory 'docs'
2023-10-09T02:34:54,702   warning: no previously-included files matching '*.png' found under directory 'docs/img'
2023-10-09T02:34:54,705   warning: no previously-included files matching '*.py[cod]' found anywhere in distribution
2023-10-09T02:34:54,707   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2023-10-09T02:34:54,709   warning: no previously-included files matching '*.so' found anywhere in distribution
2023-10-09T02:34:54,711   warning: no previously-included files matching '*.dylib' found anywhere in distribution
2023-10-09T02:34:54,714   warning: no previously-included files matching '.DS_Store' found anywhere in distribution
2023-10-09T02:34:54,716   warning: no previously-included files matching '*.gpickle' found anywhere in distribution
2023-10-09T02:34:54,718   no previously-included directories found matching 'docs/build'
2023-10-09T02:34:54,719   no previously-included directories found matching 'docs/_data'
2023-10-09T02:34:54,721   no previously-included directories found matching 'docs/source/api'
2023-10-09T02:34:54,722   no previously-included directories found matching 'exports'
2023-10-09T02:34:54,723   no previously-included directories found matching 'notebooks'
2023-10-09T02:34:54,724   no previously-included directories found matching 'tests/.pytest_cache'
2023-10-09T02:34:54,726   warning: no previously-included files found matching 'docs/*.md'
2023-10-09T02:34:54,727   warning: no previously-included files found matching 'docs/_config.yml'
2023-10-09T02:34:54,728   warning: no previously-included files found matching '.appveyor.yml'
2023-10-09T02:34:54,729   warning: no previously-included files found matching '.bumpversion.cfg'
2023-10-09T02:34:54,730   warning: no previously-included files found matching '.coveragerc'
2023-10-09T02:34:54,731   warning: no previously-included files found matching '.flake8'
2023-10-09T02:34:54,732   warning: no previously-included files found matching '.travis.yml'
2023-10-09T02:34:54,733   warning: no previously-included files found matching '.readthedocs.yml'
2023-10-09T02:34:54,734   warning: no previously-included files found matching 'tox.ini'
2023-10-09T02:34:54,735   warning: no previously-included files found matching '.pre-commit-config.yaml'
2023-10-09T02:34:54,735   warning: no previously-included files found matching 'Dockerfile'
2023-10-09T02:34:54,736   warning: no previously-included files found matching 'CITATION.cff'
2023-10-09T02:34:54,738   warning: no files found matching '*.rst'
2023-10-09T02:34:54,738   adding license file 'LICENSE'
2023-10-09T02:34:54,753   writing manifest file 'src/bioregistry.egg-info/SOURCES.txt'
2023-10-09T02:34:54,757   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.app.static' is absent from the `packages` configuration.
2023-10-09T02:34:54,757   !!

2023-10-09T02:34:54,759           ********************************************************************************
2023-10-09T02:34:54,759           ############################
2023-10-09T02:34:54,760           # Package would be ignored #
2023-10-09T02:34:54,761           ############################
2023-10-09T02:34:54,761           Python recognizes 'bioregistry.app.static' as an importable package[^1],
2023-10-09T02:34:54,761           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,762           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,763           package, please make sure that 'bioregistry.app.static' is explicitly added
2023-10-09T02:34:54,763           to the `packages` configuration field.

2023-10-09T02:34:54,764           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,765           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,765           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,766           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,767           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,768           If you don't want 'bioregistry.app.static' to be distributed and are
2023-10-09T02:34:54,768           already explicitly excluding 'bioregistry.app.static' via
2023-10-09T02:34:54,768           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,769           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,769           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,770           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,771           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,773           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,773                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,774                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,774                 directory, all directories are treated like packages.
2023-10-09T02:34:54,775           ********************************************************************************

2023-10-09T02:34:54,776   !!
2023-10-09T02:34:54,776     check.warn(importable)
2023-10-09T02:34:54,777   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.app.templates' is absent from the `packages` configuration.
2023-10-09T02:34:54,777   !!

2023-10-09T02:34:54,779           ********************************************************************************
2023-10-09T02:34:54,779           ############################
2023-10-09T02:34:54,780           # Package would be ignored #
2023-10-09T02:34:54,780           ############################
2023-10-09T02:34:54,781           Python recognizes 'bioregistry.app.templates' as an importable package[^1],
2023-10-09T02:34:54,781           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,782           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,783           package, please make sure that 'bioregistry.app.templates' is explicitly added
2023-10-09T02:34:54,783           to the `packages` configuration field.

2023-10-09T02:34:54,784           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,785           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,785           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,786           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,787           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,789           If you don't want 'bioregistry.app.templates' to be distributed and are
2023-10-09T02:34:54,789           already explicitly excluding 'bioregistry.app.templates' via
2023-10-09T02:34:54,789           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,790           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,790           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,790           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,791           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,792           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,793                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,793                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,793                 directory, all directories are treated like packages.
2023-10-09T02:34:54,794           ********************************************************************************

2023-10-09T02:34:54,794   !!
2023-10-09T02:34:54,795     check.warn(importable)
2023-10-09T02:34:54,795   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.app.templates.highlights' is absent from the `packages` configuration.
2023-10-09T02:34:54,796   !!

2023-10-09T02:34:54,796           ********************************************************************************
2023-10-09T02:34:54,797           ############################
2023-10-09T02:34:54,797           # Package would be ignored #
2023-10-09T02:34:54,798           ############################
2023-10-09T02:34:54,798           Python recognizes 'bioregistry.app.templates.highlights' as an importable package[^1],
2023-10-09T02:34:54,799           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,800           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,800           package, please make sure that 'bioregistry.app.templates.highlights' is explicitly added
2023-10-09T02:34:54,801           to the `packages` configuration field.

2023-10-09T02:34:54,802           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,802           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,803           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,804           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,805           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,806           If you don't want 'bioregistry.app.templates.highlights' to be distributed and are
2023-10-09T02:34:54,806           already explicitly excluding 'bioregistry.app.templates.highlights' via
2023-10-09T02:34:54,807           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,807           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,808           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,809           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,810           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,811           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,812                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,812                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,813                 directory, all directories are treated like packages.
2023-10-09T02:34:54,813           ********************************************************************************

2023-10-09T02:34:54,815   !!
2023-10-09T02:34:54,815     check.warn(importable)
2023-10-09T02:34:54,815   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.app.templates.meta' is absent from the `packages` configuration.
2023-10-09T02:34:54,816   !!

2023-10-09T02:34:54,816           ********************************************************************************
2023-10-09T02:34:54,817           ############################
2023-10-09T02:34:54,817           # Package would be ignored #
2023-10-09T02:34:54,817           ############################
2023-10-09T02:34:54,818           Python recognizes 'bioregistry.app.templates.meta' as an importable package[^1],
2023-10-09T02:34:54,818           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,819           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,819           package, please make sure that 'bioregistry.app.templates.meta' is explicitly added
2023-10-09T02:34:54,819           to the `packages` configuration field.

2023-10-09T02:34:54,820           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,820           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,821           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,821           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,823           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,824           If you don't want 'bioregistry.app.templates.meta' to be distributed and are
2023-10-09T02:34:54,824           already explicitly excluding 'bioregistry.app.templates.meta' via
2023-10-09T02:34:54,824           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,825           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,825           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,827           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,828           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,829           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,830                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,830                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,831                 directory, all directories are treated like packages.
2023-10-09T02:34:54,832           ********************************************************************************

2023-10-09T02:34:54,833   !!
2023-10-09T02:34:54,833     check.warn(importable)
2023-10-09T02:34:54,834   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.app.templates.resolve_errors' is absent from the `packages` configuration.
2023-10-09T02:34:54,834   !!

2023-10-09T02:34:54,835           ********************************************************************************
2023-10-09T02:34:54,836           ############################
2023-10-09T02:34:54,836           # Package would be ignored #
2023-10-09T02:34:54,837           ############################
2023-10-09T02:34:54,838           Python recognizes 'bioregistry.app.templates.resolve_errors' as an importable package[^1],
2023-10-09T02:34:54,838           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,840           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,840           package, please make sure that 'bioregistry.app.templates.resolve_errors' is explicitly added
2023-10-09T02:34:54,841           to the `packages` configuration field.

2023-10-09T02:34:54,842           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,842           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,843           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,844           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,845           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,845           If you don't want 'bioregistry.app.templates.resolve_errors' to be distributed and are
2023-10-09T02:34:54,846           already explicitly excluding 'bioregistry.app.templates.resolve_errors' via
2023-10-09T02:34:54,846           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,847           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,847           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,848           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,849           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,851           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,851                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,852                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,853                 directory, all directories are treated like packages.
2023-10-09T02:34:54,853           ********************************************************************************

2023-10-09T02:34:54,854   !!
2023-10-09T02:34:54,855     check.warn(importable)
2023-10-09T02:34:54,856   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.aberowl' is absent from the `packages` configuration.
2023-10-09T02:34:54,856   !!

2023-10-09T02:34:54,857           ********************************************************************************
2023-10-09T02:34:54,858           ############################
2023-10-09T02:34:54,859           # Package would be ignored #
2023-10-09T02:34:54,859           ############################
2023-10-09T02:34:54,860           Python recognizes 'bioregistry.data.external.aberowl' as an importable package[^1],
2023-10-09T02:34:54,861           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,862           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,863           package, please make sure that 'bioregistry.data.external.aberowl' is explicitly added
2023-10-09T02:34:54,863           to the `packages` configuration field.

2023-10-09T02:34:54,864           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,865           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,865           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,867           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,868           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,869           If you don't want 'bioregistry.data.external.aberowl' to be distributed and are
2023-10-09T02:34:54,870           already explicitly excluding 'bioregistry.data.external.aberowl' via
2023-10-09T02:34:54,870           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,871           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,872           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,874           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,876           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,878           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,879                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,880                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,880                 directory, all directories are treated like packages.
2023-10-09T02:34:54,881           ********************************************************************************

2023-10-09T02:34:54,883   !!
2023-10-09T02:34:54,883     check.warn(importable)
2023-10-09T02:34:54,884   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.agroportal' is absent from the `packages` configuration.
2023-10-09T02:34:54,885   !!

2023-10-09T02:34:54,885           ********************************************************************************
2023-10-09T02:34:54,886           ############################
2023-10-09T02:34:54,886           # Package would be ignored #
2023-10-09T02:34:54,887           ############################
2023-10-09T02:34:54,887           Python recognizes 'bioregistry.data.external.agroportal' as an importable package[^1],
2023-10-09T02:34:54,888           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,889           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,889           package, please make sure that 'bioregistry.data.external.agroportal' is explicitly added
2023-10-09T02:34:54,890           to the `packages` configuration field.

2023-10-09T02:34:54,891           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,891           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,892           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,893           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,894           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,896           If you don't want 'bioregistry.data.external.agroportal' to be distributed and are
2023-10-09T02:34:54,896           already explicitly excluding 'bioregistry.data.external.agroportal' via
2023-10-09T02:34:54,897           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,898           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,898           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,900           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,901           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,902           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,903                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,904                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,904                 directory, all directories are treated like packages.
2023-10-09T02:34:54,905           ********************************************************************************

2023-10-09T02:34:54,906   !!
2023-10-09T02:34:54,907     check.warn(importable)
2023-10-09T02:34:54,908   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.bartoc' is absent from the `packages` configuration.
2023-10-09T02:34:54,908   !!

2023-10-09T02:34:54,910           ********************************************************************************
2023-10-09T02:34:54,910           ############################
2023-10-09T02:34:54,911           # Package would be ignored #
2023-10-09T02:34:54,912           ############################
2023-10-09T02:34:54,912           Python recognizes 'bioregistry.data.external.bartoc' as an importable package[^1],
2023-10-09T02:34:54,913           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,914           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,914           package, please make sure that 'bioregistry.data.external.bartoc' is explicitly added
2023-10-09T02:34:54,914           to the `packages` configuration field.

2023-10-09T02:34:54,915           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,916           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,916           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,917           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,918           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,919           If you don't want 'bioregistry.data.external.bartoc' to be distributed and are
2023-10-09T02:34:54,920           already explicitly excluding 'bioregistry.data.external.bartoc' via
2023-10-09T02:34:54,920           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,921           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,921           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,923           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,924           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,926           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,926                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,927                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,928                 directory, all directories are treated like packages.
2023-10-09T02:34:54,928           ********************************************************************************

2023-10-09T02:34:54,930   !!
2023-10-09T02:34:54,930     check.warn(importable)
2023-10-09T02:34:54,931   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.biocontext' is absent from the `packages` configuration.
2023-10-09T02:34:54,932   !!

2023-10-09T02:34:54,933           ********************************************************************************
2023-10-09T02:34:54,933           ############################
2023-10-09T02:34:54,934           # Package would be ignored #
2023-10-09T02:34:54,935           ############################
2023-10-09T02:34:54,935           Python recognizes 'bioregistry.data.external.biocontext' as an importable package[^1],
2023-10-09T02:34:54,936           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,937           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,937           package, please make sure that 'bioregistry.data.external.biocontext' is explicitly added
2023-10-09T02:34:54,938           to the `packages` configuration field.

2023-10-09T02:34:54,939           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,940           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,941           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,942           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,943           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,945           If you don't want 'bioregistry.data.external.biocontext' to be distributed and are
2023-10-09T02:34:54,945           already explicitly excluding 'bioregistry.data.external.biocontext' via
2023-10-09T02:34:54,946           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,946           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,947           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,948           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,949           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,951           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,951                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,952                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,952                 directory, all directories are treated like packages.
2023-10-09T02:34:54,953           ********************************************************************************

2023-10-09T02:34:54,954   !!
2023-10-09T02:34:54,954     check.warn(importable)
2023-10-09T02:34:54,955   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.biolink' is absent from the `packages` configuration.
2023-10-09T02:34:54,955   !!

2023-10-09T02:34:54,956           ********************************************************************************
2023-10-09T02:34:54,957           ############################
2023-10-09T02:34:54,957           # Package would be ignored #
2023-10-09T02:34:54,958           ############################
2023-10-09T02:34:54,958           Python recognizes 'bioregistry.data.external.biolink' as an importable package[^1],
2023-10-09T02:34:54,959           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,963           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,964           package, please make sure that 'bioregistry.data.external.biolink' is explicitly added
2023-10-09T02:34:54,964           to the `packages` configuration field.

2023-10-09T02:34:54,966           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,966           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,967           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,968           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,969           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,971           If you don't want 'bioregistry.data.external.biolink' to be distributed and are
2023-10-09T02:34:54,971           already explicitly excluding 'bioregistry.data.external.biolink' via
2023-10-09T02:34:54,972           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,972           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,973           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,974           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,976           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:54,978           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:54,978                 even if it does not contain any `.py` files.
2023-10-09T02:34:54,979                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:54,980                 directory, all directories are treated like packages.
2023-10-09T02:34:54,980           ********************************************************************************

2023-10-09T02:34:54,981   !!
2023-10-09T02:34:54,982     check.warn(importable)
2023-10-09T02:34:54,982   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.bioportal' is absent from the `packages` configuration.
2023-10-09T02:34:54,983   !!

2023-10-09T02:34:54,984           ********************************************************************************
2023-10-09T02:34:54,984           ############################
2023-10-09T02:34:54,985           # Package would be ignored #
2023-10-09T02:34:54,985           ############################
2023-10-09T02:34:54,986           Python recognizes 'bioregistry.data.external.bioportal' as an importable package[^1],
2023-10-09T02:34:54,986           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:54,987           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:54,988           package, please make sure that 'bioregistry.data.external.bioportal' is explicitly added
2023-10-09T02:34:54,988           to the `packages` configuration field.

2023-10-09T02:34:54,989           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:54,990           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:54,990           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:54,991           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:54,992           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:54,993           If you don't want 'bioregistry.data.external.bioportal' to be distributed and are
2023-10-09T02:34:54,994           already explicitly excluding 'bioregistry.data.external.bioportal' via
2023-10-09T02:34:54,994           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:54,995           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:54,996           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:54,997           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:54,998           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,000           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,001                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,001                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,002                 directory, all directories are treated like packages.
2023-10-09T02:34:55,003           ********************************************************************************

2023-10-09T02:34:55,004   !!
2023-10-09T02:34:55,004     check.warn(importable)
2023-10-09T02:34:55,005   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.cellosaurus' is absent from the `packages` configuration.
2023-10-09T02:34:55,006   !!

2023-10-09T02:34:55,007           ********************************************************************************
2023-10-09T02:34:55,007           ############################
2023-10-09T02:34:55,008           # Package would be ignored #
2023-10-09T02:34:55,009           ############################
2023-10-09T02:34:55,009           Python recognizes 'bioregistry.data.external.cellosaurus' as an importable package[^1],
2023-10-09T02:34:55,010           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,011           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,012           package, please make sure that 'bioregistry.data.external.cellosaurus' is explicitly added
2023-10-09T02:34:55,013           to the `packages` configuration field.

2023-10-09T02:34:55,014           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,014           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,015           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,016           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,017           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,017           If you don't want 'bioregistry.data.external.cellosaurus' to be distributed and are
2023-10-09T02:34:55,018           already explicitly excluding 'bioregistry.data.external.cellosaurus' via
2023-10-09T02:34:55,018           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,019           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,019           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,020           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,021           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,023           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,023                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,024                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,024                 directory, all directories are treated like packages.
2023-10-09T02:34:55,025           ********************************************************************************

2023-10-09T02:34:55,026   !!
2023-10-09T02:34:55,027     check.warn(importable)
2023-10-09T02:34:55,027   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.cheminf' is absent from the `packages` configuration.
2023-10-09T02:34:55,028   !!

2023-10-09T02:34:55,029           ********************************************************************************
2023-10-09T02:34:55,030           ############################
2023-10-09T02:34:55,030           # Package would be ignored #
2023-10-09T02:34:55,031           ############################
2023-10-09T02:34:55,032           Python recognizes 'bioregistry.data.external.cheminf' as an importable package[^1],
2023-10-09T02:34:55,032           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,034           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,034           package, please make sure that 'bioregistry.data.external.cheminf' is explicitly added
2023-10-09T02:34:55,035           to the `packages` configuration field.

2023-10-09T02:34:55,036           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,043           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,043           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,045           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,046           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,047           If you don't want 'bioregistry.data.external.cheminf' to be distributed and are
2023-10-09T02:34:55,048           already explicitly excluding 'bioregistry.data.external.cheminf' via
2023-10-09T02:34:55,049           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,049           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,050           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,051           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,052           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,063           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,063                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,064                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,064                 directory, all directories are treated like packages.
2023-10-09T02:34:55,065           ********************************************************************************

2023-10-09T02:34:55,066   !!
2023-10-09T02:34:55,067     check.warn(importable)
2023-10-09T02:34:55,067   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.cropoct' is absent from the `packages` configuration.
2023-10-09T02:34:55,068   !!

2023-10-09T02:34:55,069           ********************************************************************************
2023-10-09T02:34:55,070           ############################
2023-10-09T02:34:55,070           # Package would be ignored #
2023-10-09T02:34:55,071           ############################
2023-10-09T02:34:55,071           Python recognizes 'bioregistry.data.external.cropoct' as an importable package[^1],
2023-10-09T02:34:55,072           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,073           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,074           package, please make sure that 'bioregistry.data.external.cropoct' is explicitly added
2023-10-09T02:34:55,074           to the `packages` configuration field.

2023-10-09T02:34:55,076           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,076           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,077           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,079           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,080           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,082           If you don't want 'bioregistry.data.external.cropoct' to be distributed and are
2023-10-09T02:34:55,082           already explicitly excluding 'bioregistry.data.external.cropoct' via
2023-10-09T02:34:55,083           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,094           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,102           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,146           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,150           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,152           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,152                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,153                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,154                 directory, all directories are treated like packages.
2023-10-09T02:34:55,155           ********************************************************************************

2023-10-09T02:34:55,157   !!
2023-10-09T02:34:55,158     check.warn(importable)
2023-10-09T02:34:55,159   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.ecoportal' is absent from the `packages` configuration.
2023-10-09T02:34:55,160   !!

2023-10-09T02:34:55,161           ********************************************************************************
2023-10-09T02:34:55,162           ############################
2023-10-09T02:34:55,163           # Package would be ignored #
2023-10-09T02:34:55,163           ############################
2023-10-09T02:34:55,164           Python recognizes 'bioregistry.data.external.ecoportal' as an importable package[^1],
2023-10-09T02:34:55,164           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,165           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,165           package, please make sure that 'bioregistry.data.external.ecoportal' is explicitly added
2023-10-09T02:34:55,166           to the `packages` configuration field.

2023-10-09T02:34:55,167           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,167           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,168           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,168           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,169           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,170           If you don't want 'bioregistry.data.external.ecoportal' to be distributed and are
2023-10-09T02:34:55,171           already explicitly excluding 'bioregistry.data.external.ecoportal' via
2023-10-09T02:34:55,171           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,172           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,172           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,173           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,174           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,176           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,176                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,177                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,177                 directory, all directories are treated like packages.
2023-10-09T02:34:55,178           ********************************************************************************

2023-10-09T02:34:55,179   !!
2023-10-09T02:34:55,179     check.warn(importable)
2023-10-09T02:34:55,180   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.edam' is absent from the `packages` configuration.
2023-10-09T02:34:55,180   !!

2023-10-09T02:34:55,181           ********************************************************************************
2023-10-09T02:34:55,182           ############################
2023-10-09T02:34:55,183           # Package would be ignored #
2023-10-09T02:34:55,184           ############################
2023-10-09T02:34:55,185           Python recognizes 'bioregistry.data.external.edam' as an importable package[^1],
2023-10-09T02:34:55,186           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,188           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,188           package, please make sure that 'bioregistry.data.external.edam' is explicitly added
2023-10-09T02:34:55,189           to the `packages` configuration field.

2023-10-09T02:34:55,190           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,190           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,191           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,192           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,198           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,201           If you don't want 'bioregistry.data.external.edam' to be distributed and are
2023-10-09T02:34:55,201           already explicitly excluding 'bioregistry.data.external.edam' via
2023-10-09T02:34:55,202           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,202           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,203           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,204           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,205           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,206           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,207                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,207                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,208                 directory, all directories are treated like packages.
2023-10-09T02:34:55,208           ********************************************************************************

2023-10-09T02:34:55,209   !!
2023-10-09T02:34:55,210     check.warn(importable)
2023-10-09T02:34:55,210   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.fairsharing' is absent from the `packages` configuration.
2023-10-09T02:34:55,210   !!

2023-10-09T02:34:55,212           ********************************************************************************
2023-10-09T02:34:55,213           ############################
2023-10-09T02:34:55,214           # Package would be ignored #
2023-10-09T02:34:55,214           ############################
2023-10-09T02:34:55,215           Python recognizes 'bioregistry.data.external.fairsharing' as an importable package[^1],
2023-10-09T02:34:55,216           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,218           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,218           package, please make sure that 'bioregistry.data.external.fairsharing' is explicitly added
2023-10-09T02:34:55,219           to the `packages` configuration field.

2023-10-09T02:34:55,221           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,222           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,223           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,224           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,226           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,228           If you don't want 'bioregistry.data.external.fairsharing' to be distributed and are
2023-10-09T02:34:55,229           already explicitly excluding 'bioregistry.data.external.fairsharing' via
2023-10-09T02:34:55,233           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,235           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,236           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,237           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,238           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,240           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,241                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,242                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,242                 directory, all directories are treated like packages.
2023-10-09T02:34:55,244           ********************************************************************************

2023-10-09T02:34:55,245   !!
2023-10-09T02:34:55,246     check.warn(importable)
2023-10-09T02:34:55,247   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.go' is absent from the `packages` configuration.
2023-10-09T02:34:55,247   !!

2023-10-09T02:34:55,248           ********************************************************************************
2023-10-09T02:34:55,249           ############################
2023-10-09T02:34:55,249           # Package would be ignored #
2023-10-09T02:34:55,250           ############################
2023-10-09T02:34:55,252           Python recognizes 'bioregistry.data.external.go' as an importable package[^1],
2023-10-09T02:34:55,253           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,256           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,259           package, please make sure that 'bioregistry.data.external.go' is explicitly added
2023-10-09T02:34:55,265           to the `packages` configuration field.

2023-10-09T02:34:55,267           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,267           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,268           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,269           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,270           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,271           If you don't want 'bioregistry.data.external.go' to be distributed and are
2023-10-09T02:34:55,271           already explicitly excluding 'bioregistry.data.external.go' via
2023-10-09T02:34:55,272           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,273           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,273           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,275           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,276           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,278           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,279                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,280                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,282                 directory, all directories are treated like packages.
2023-10-09T02:34:55,288           ********************************************************************************

2023-10-09T02:34:55,313   !!
2023-10-09T02:34:55,313     check.warn(importable)
2023-10-09T02:34:55,314   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.hl7' is absent from the `packages` configuration.
2023-10-09T02:34:55,314   !!

2023-10-09T02:34:55,315           ********************************************************************************
2023-10-09T02:34:55,316           ############################
2023-10-09T02:34:55,316           # Package would be ignored #
2023-10-09T02:34:55,317           ############################
2023-10-09T02:34:55,318           Python recognizes 'bioregistry.data.external.hl7' as an importable package[^1],
2023-10-09T02:34:55,318           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,320           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,320           package, please make sure that 'bioregistry.data.external.hl7' is explicitly added
2023-10-09T02:34:55,321           to the `packages` configuration field.

2023-10-09T02:34:55,322           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,323           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,323           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,324           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,325           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,326           If you don't want 'bioregistry.data.external.hl7' to be distributed and are
2023-10-09T02:34:55,326           already explicitly excluding 'bioregistry.data.external.hl7' via
2023-10-09T02:34:55,327           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,327           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,328           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,331           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,334           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,350           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,351                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,352                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,352                 directory, all directories are treated like packages.
2023-10-09T02:34:55,353           ********************************************************************************

2023-10-09T02:34:55,354   !!
2023-10-09T02:34:55,355     check.warn(importable)
2023-10-09T02:34:55,355   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.miriam' is absent from the `packages` configuration.
2023-10-09T02:34:55,356   !!

2023-10-09T02:34:55,357           ********************************************************************************
2023-10-09T02:34:55,358           ############################
2023-10-09T02:34:55,358           # Package would be ignored #
2023-10-09T02:34:55,359           ############################
2023-10-09T02:34:55,359           Python recognizes 'bioregistry.data.external.miriam' as an importable package[^1],
2023-10-09T02:34:55,360           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,361           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,362           package, please make sure that 'bioregistry.data.external.miriam' is explicitly added
2023-10-09T02:34:55,363           to the `packages` configuration field.

2023-10-09T02:34:55,364           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,364           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,365           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,366           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,367           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,368           If you don't want 'bioregistry.data.external.miriam' to be distributed and are
2023-10-09T02:34:55,369           already explicitly excluding 'bioregistry.data.external.miriam' via
2023-10-09T02:34:55,369           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,370           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,370           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,372           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,373           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,378           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,378                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,379                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,379                 directory, all directories are treated like packages.
2023-10-09T02:34:55,380           ********************************************************************************

2023-10-09T02:34:55,381   !!
2023-10-09T02:34:55,383     check.warn(importable)
2023-10-09T02:34:55,384   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.n2t' is absent from the `packages` configuration.
2023-10-09T02:34:55,384   !!

2023-10-09T02:34:55,386           ********************************************************************************
2023-10-09T02:34:55,390           ############################
2023-10-09T02:34:55,390           # Package would be ignored #
2023-10-09T02:34:55,391           ############################
2023-10-09T02:34:55,392           Python recognizes 'bioregistry.data.external.n2t' as an importable package[^1],
2023-10-09T02:34:55,394           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,398           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,399           package, please make sure that 'bioregistry.data.external.n2t' is explicitly added
2023-10-09T02:34:55,400           to the `packages` configuration field.

2023-10-09T02:34:55,401           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,401           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,402           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,403           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,404           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,405           If you don't want 'bioregistry.data.external.n2t' to be distributed and are
2023-10-09T02:34:55,405           already explicitly excluding 'bioregistry.data.external.n2t' via
2023-10-09T02:34:55,406           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,407           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,407           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,408           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,409           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,411           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,412                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,412                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,413                 directory, all directories are treated like packages.
2023-10-09T02:34:55,414           ********************************************************************************

2023-10-09T02:34:55,415   !!
2023-10-09T02:34:55,416     check.warn(importable)
2023-10-09T02:34:55,416   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.ncbi' is absent from the `packages` configuration.
2023-10-09T02:34:55,417   !!

2023-10-09T02:34:55,420           ********************************************************************************
2023-10-09T02:34:55,425           ############################
2023-10-09T02:34:55,437           # Package would be ignored #
2023-10-09T02:34:55,454           ############################
2023-10-09T02:34:55,456           Python recognizes 'bioregistry.data.external.ncbi' as an importable package[^1],
2023-10-09T02:34:55,457           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,458           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,459           package, please make sure that 'bioregistry.data.external.ncbi' is explicitly added
2023-10-09T02:34:55,459           to the `packages` configuration field.

2023-10-09T02:34:55,460           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,460           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,461           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,462           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,464           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,465           If you don't want 'bioregistry.data.external.ncbi' to be distributed and are
2023-10-09T02:34:55,466           already explicitly excluding 'bioregistry.data.external.ncbi' via
2023-10-09T02:34:55,467           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,467           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,469           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,471           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,473           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,475           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,476                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,477                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,478                 directory, all directories are treated like packages.
2023-10-09T02:34:55,478           ********************************************************************************

2023-10-09T02:34:55,480   !!
2023-10-09T02:34:55,480     check.warn(importable)
2023-10-09T02:34:55,481   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.obofoundry' is absent from the `packages` configuration.
2023-10-09T02:34:55,483   !!

2023-10-09T02:34:55,484           ********************************************************************************
2023-10-09T02:34:55,485           ############################
2023-10-09T02:34:55,486           # Package would be ignored #
2023-10-09T02:34:55,487           ############################
2023-10-09T02:34:55,488           Python recognizes 'bioregistry.data.external.obofoundry' as an importable package[^1],
2023-10-09T02:34:55,489           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,490           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,491           package, please make sure that 'bioregistry.data.external.obofoundry' is explicitly added
2023-10-09T02:34:55,492           to the `packages` configuration field.

2023-10-09T02:34:55,494           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,495           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,496           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,498           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,500           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,501           If you don't want 'bioregistry.data.external.obofoundry' to be distributed and are
2023-10-09T02:34:55,502           already explicitly excluding 'bioregistry.data.external.obofoundry' via
2023-10-09T02:34:55,503           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,504           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,505           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,506           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,508           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,510           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,511                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,512                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,513                 directory, all directories are treated like packages.
2023-10-09T02:34:55,514           ********************************************************************************

2023-10-09T02:34:55,516   !!
2023-10-09T02:34:55,516     check.warn(importable)
2023-10-09T02:34:55,517   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.ols' is absent from the `packages` configuration.
2023-10-09T02:34:55,517   !!

2023-10-09T02:34:55,520           ********************************************************************************
2023-10-09T02:34:55,522           ############################
2023-10-09T02:34:55,523           # Package would be ignored #
2023-10-09T02:34:55,523           ############################
2023-10-09T02:34:55,524           Python recognizes 'bioregistry.data.external.ols' as an importable package[^1],
2023-10-09T02:34:55,525           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,526           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,526           package, please make sure that 'bioregistry.data.external.ols' is explicitly added
2023-10-09T02:34:55,527           to the `packages` configuration field.

2023-10-09T02:34:55,528           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,530           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,534           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,537           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,538           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,539           If you don't want 'bioregistry.data.external.ols' to be distributed and are
2023-10-09T02:34:55,539           already explicitly excluding 'bioregistry.data.external.ols' via
2023-10-09T02:34:55,540           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,540           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,541           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,542           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,543           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,545           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,546                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,547                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,547                 directory, all directories are treated like packages.
2023-10-09T02:34:55,548           ********************************************************************************

2023-10-09T02:34:55,551   !!
2023-10-09T02:34:55,552     check.warn(importable)
2023-10-09T02:34:55,552   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.ontobee' is absent from the `packages` configuration.
2023-10-09T02:34:55,553   !!

2023-10-09T02:34:55,554           ********************************************************************************
2023-10-09T02:34:55,554           ############################
2023-10-09T02:34:55,558           # Package would be ignored #
2023-10-09T02:34:55,558           ############################
2023-10-09T02:34:55,559           Python recognizes 'bioregistry.data.external.ontobee' as an importable package[^1],
2023-10-09T02:34:55,560           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,563           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,564           package, please make sure that 'bioregistry.data.external.ontobee' is explicitly added
2023-10-09T02:34:55,566           to the `packages` configuration field.

2023-10-09T02:34:55,572           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,572           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,572           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,573           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,575           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,576           If you don't want 'bioregistry.data.external.ontobee' to be distributed and are
2023-10-09T02:34:55,576           already explicitly excluding 'bioregistry.data.external.ontobee' via
2023-10-09T02:34:55,577           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,577           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,578           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,579           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,581           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,583           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,583                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,584                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,585                 directory, all directories are treated like packages.
2023-10-09T02:34:55,588           ********************************************************************************

2023-10-09T02:34:55,608   !!
2023-10-09T02:34:55,616     check.warn(importable)
2023-10-09T02:34:55,618   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.prefixcommons' is absent from the `packages` configuration.
2023-10-09T02:34:55,619   !!

2023-10-09T02:34:55,621           ********************************************************************************
2023-10-09T02:34:55,622           ############################
2023-10-09T02:34:55,623           # Package would be ignored #
2023-10-09T02:34:55,624           ############################
2023-10-09T02:34:55,625           Python recognizes 'bioregistry.data.external.prefixcommons' as an importable package[^1],
2023-10-09T02:34:55,627           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,628           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,629           package, please make sure that 'bioregistry.data.external.prefixcommons' is explicitly added
2023-10-09T02:34:55,635           to the `packages` configuration field.

2023-10-09T02:34:55,640           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,641           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,642           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,644           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,647           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,649           If you don't want 'bioregistry.data.external.prefixcommons' to be distributed and are
2023-10-09T02:34:55,651           already explicitly excluding 'bioregistry.data.external.prefixcommons' via
2023-10-09T02:34:55,652           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,652           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,653           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,654           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,660           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,669           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,670                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,670                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,671                 directory, all directories are treated like packages.
2023-10-09T02:34:55,671           ********************************************************************************

2023-10-09T02:34:55,672   !!
2023-10-09T02:34:55,673     check.warn(importable)
2023-10-09T02:34:55,673   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.re3data' is absent from the `packages` configuration.
2023-10-09T02:34:55,674   !!

2023-10-09T02:34:55,675           ********************************************************************************
2023-10-09T02:34:55,675           ############################
2023-10-09T02:34:55,676           # Package would be ignored #
2023-10-09T02:34:55,676           ############################
2023-10-09T02:34:55,677           Python recognizes 'bioregistry.data.external.re3data' as an importable package[^1],
2023-10-09T02:34:55,677           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,678           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,679           package, please make sure that 'bioregistry.data.external.re3data' is explicitly added
2023-10-09T02:34:55,680           to the `packages` configuration field.

2023-10-09T02:34:55,681           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,682           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,682           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,683           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,686           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,688           If you don't want 'bioregistry.data.external.re3data' to be distributed and are
2023-10-09T02:34:55,689           already explicitly excluding 'bioregistry.data.external.re3data' via
2023-10-09T02:34:55,689           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,690           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,690           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,692           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,693           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,696           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,697                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,698                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,698                 directory, all directories are treated like packages.
2023-10-09T02:34:55,698           ********************************************************************************

2023-10-09T02:34:55,699   !!
2023-10-09T02:34:55,700     check.warn(importable)
2023-10-09T02:34:55,700   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.uniprot' is absent from the `packages` configuration.
2023-10-09T02:34:55,701   !!

2023-10-09T02:34:55,701           ********************************************************************************
2023-10-09T02:34:55,702           ############################
2023-10-09T02:34:55,702           # Package would be ignored #
2023-10-09T02:34:55,703           ############################
2023-10-09T02:34:55,704           Python recognizes 'bioregistry.data.external.uniprot' as an importable package[^1],
2023-10-09T02:34:55,704           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,706           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,706           package, please make sure that 'bioregistry.data.external.uniprot' is explicitly added
2023-10-09T02:34:55,707           to the `packages` configuration field.

2023-10-09T02:34:55,708           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,708           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,709           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,710           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,711           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,712           If you don't want 'bioregistry.data.external.uniprot' to be distributed and are
2023-10-09T02:34:55,713           already explicitly excluding 'bioregistry.data.external.uniprot' via
2023-10-09T02:34:55,714           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,714           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,715           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,716           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,717           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,719           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,720                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,720                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,721                 directory, all directories are treated like packages.
2023-10-09T02:34:55,721           ********************************************************************************

2023-10-09T02:34:55,723   !!
2023-10-09T02:34:55,723     check.warn(importable)
2023-10-09T02:34:55,724   /tmp/pip-build-env-qmag2v77/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'bioregistry.data.external.wikidata' is absent from the `packages` configuration.
2023-10-09T02:34:55,724   !!

2023-10-09T02:34:55,726           ********************************************************************************
2023-10-09T02:34:55,727           ############################
2023-10-09T02:34:55,727           # Package would be ignored #
2023-10-09T02:34:55,728           ############################
2023-10-09T02:34:55,728           Python recognizes 'bioregistry.data.external.wikidata' as an importable package[^1],
2023-10-09T02:34:55,728           but it is absent from setuptools' `packages` configuration.

2023-10-09T02:34:55,730           This leads to an ambiguous overall configuration. If you want to distribute this
2023-10-09T02:34:55,731           package, please make sure that 'bioregistry.data.external.wikidata' is explicitly added
2023-10-09T02:34:55,732           to the `packages` configuration field.

2023-10-09T02:34:55,733           Alternatively, you can also rely on setuptools' discovery methods
2023-10-09T02:34:55,733           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-10-09T02:34:55,734           instead of `find_packages(...)`/`find:`).

2023-10-09T02:34:55,734           You can read more about "package discovery" on setuptools documentation page:

2023-10-09T02:34:55,735           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-10-09T02:34:55,736           If you don't want 'bioregistry.data.external.wikidata' to be distributed and are
2023-10-09T02:34:55,737           already explicitly excluding 'bioregistry.data.external.wikidata' via
2023-10-09T02:34:55,737           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-10-09T02:34:55,738           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-10-09T02:34:55,738           combination with a more fine grained `package-data` configuration.

2023-10-09T02:34:55,739           You can read more about "package data files" on setuptools documentation page:

2023-10-09T02:34:55,740           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-10-09T02:34:55,742           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-10-09T02:34:55,745                 even if it does not contain any `.py` files.
2023-10-09T02:34:55,745                 On the other hand, currently there is no concept of package data
2023-10-09T02:34:55,746                 directory, all directories are treated like packages.
2023-10-09T02:34:55,746           ********************************************************************************

2023-10-09T02:34:55,747   !!
2023-10-09T02:34:55,748     check.warn(importable)
2023-10-09T02:34:55,748   copying src/bioregistry/py.typed -> build/lib/bioregistry
2023-10-09T02:34:55,749   copying src/bioregistry/data/README.md -> build/lib/bioregistry/data
2023-10-09T02:34:55,749   copying src/bioregistry/data/bioregistry.json -> build/lib/bioregistry/data
2023-10-09T02:34:55,750   copying src/bioregistry/data/collections.json -> build/lib/bioregistry/data
2023-10-09T02:34:55,750   copying src/bioregistry/data/contexts.json -> build/lib/bioregistry/data
2023-10-09T02:34:55,751   copying src/bioregistry/data/metaregistry.json -> build/lib/bioregistry/data
2023-10-09T02:34:55,752   copying src/bioregistry/data/mismatch.json -> build/lib/bioregistry/data
2023-10-09T02:34:55,752   copying src/bioregistry/data/processing_biolink.json -> build/lib/bioregistry/data
2023-10-09T02:34:55,753   copying src/bioregistry/data/processing_go.json -> build/lib/bioregistry/data
2023-10-09T02:34:55,753   copying src/bioregistry/data/processing_ols.json -> build/lib/bioregistry/data
2023-10-09T02:34:55,754   copying src/bioregistry/data/processing_wikidata.json -> build/lib/bioregistry/data
2023-10-09T02:34:55,754   creating build/lib/bioregistry/data/external
2023-10-09T02:34:55,755   creating build/lib/bioregistry/data/external/aberowl
2023-10-09T02:34:55,755   copying src/bioregistry/data/external/aberowl/curation.tsv -> build/lib/bioregistry/data/external/aberowl
2023-10-09T02:34:55,756   copying src/bioregistry/data/external/aberowl/processed.json -> build/lib/bioregistry/data/external/aberowl
2023-10-09T02:34:55,757   copying src/bioregistry/data/external/aberowl/raw.json -> build/lib/bioregistry/data/external/aberowl
2023-10-09T02:34:55,757   creating build/lib/bioregistry/data/external/agroportal
2023-10-09T02:34:55,758   copying src/bioregistry/data/external/agroportal/curation.tsv -> build/lib/bioregistry/data/external/agroportal
2023-10-09T02:34:55,758   copying src/bioregistry/data/external/agroportal/processed.json -> build/lib/bioregistry/data/external/agroportal
2023-10-09T02:34:55,759   copying src/bioregistry/data/external/agroportal/raw.json -> build/lib/bioregistry/data/external/agroportal
2023-10-09T02:34:55,760   creating build/lib/bioregistry/data/external/bartoc
2023-10-09T02:34:55,760   copying src/bioregistry/data/external/bartoc/curation.tsv -> build/lib/bioregistry/data/external/bartoc
2023-10-09T02:34:55,761   copying src/bioregistry/data/external/bartoc/processed.json -> build/lib/bioregistry/data/external/bartoc
2023-10-09T02:34:55,761   creating build/lib/bioregistry/data/external/biocontext
2023-10-09T02:34:55,762   copying src/bioregistry/data/external/biocontext/curation.tsv -> build/lib/bioregistry/data/external/biocontext
2023-10-09T02:34:55,763   copying src/bioregistry/data/external/biocontext/processed.json -> build/lib/bioregistry/data/external/biocontext
2023-10-09T02:34:55,764   copying src/bioregistry/data/external/biocontext/raw.json -> build/lib/bioregistry/data/external/biocontext
2023-10-09T02:34:55,764   creating build/lib/bioregistry/data/external/biolink
2023-10-09T02:34:55,765   copying src/bioregistry/data/external/biolink/curation.tsv -> build/lib/bioregistry/data/external/biolink
2023-10-09T02:34:55,766   copying src/bioregistry/data/external/biolink/processed.json -> build/lib/bioregistry/data/external/biolink
2023-10-09T02:34:55,766   copying src/bioregistry/data/external/biolink/raw.yaml -> build/lib/bioregistry/data/external/biolink
2023-10-09T02:34:55,767   creating build/lib/bioregistry/data/external/bioportal
2023-10-09T02:34:55,768   copying src/bioregistry/data/external/bioportal/curation.tsv -> build/lib/bioregistry/data/external/bioportal
2023-10-09T02:34:55,768   copying src/bioregistry/data/external/bioportal/processed.json -> build/lib/bioregistry/data/external/bioportal
2023-10-09T02:34:55,769   copying src/bioregistry/data/external/bioportal/raw.json -> build/lib/bioregistry/data/external/bioportal
2023-10-09T02:34:55,769   creating build/lib/bioregistry/data/external/cellosaurus
2023-10-09T02:34:55,770   copying src/bioregistry/data/external/cellosaurus/curation.tsv -> build/lib/bioregistry/data/external/cellosaurus
2023-10-09T02:34:55,770   copying src/bioregistry/data/external/cellosaurus/processed.json -> build/lib/bioregistry/data/external/cellosaurus
2023-10-09T02:34:55,771   copying src/bioregistry/data/external/cellosaurus/raw.txt -> build/lib/bioregistry/data/external/cellosaurus
2023-10-09T02:34:55,772   creating build/lib/bioregistry/data/external/cheminf
2023-10-09T02:34:55,772   copying src/bioregistry/data/external/cheminf/processed.json -> build/lib/bioregistry/data/external/cheminf
2023-10-09T02:34:55,773   creating build/lib/bioregistry/data/external/cropoct
2023-10-09T02:34:55,773   copying src/bioregistry/data/external/cropoct/curation.tsv -> build/lib/bioregistry/data/external/cropoct
2023-10-09T02:34:55,774   copying src/bioregistry/data/external/cropoct/processed.json -> build/lib/bioregistry/data/external/cropoct
2023-10-09T02:34:55,774   copying src/bioregistry/data/external/cropoct/raw.yaml -> build/lib/bioregistry/data/external/cropoct
2023-10-09T02:34:55,775   creating build/lib/bioregistry/data/external/ecoportal
2023-10-09T02:34:55,776   copying src/bioregistry/data/external/ecoportal/curation.tsv -> build/lib/bioregistry/data/external/ecoportal
2023-10-09T02:34:55,776   copying src/bioregistry/data/external/ecoportal/processed.json -> build/lib/bioregistry/data/external/ecoportal
2023-10-09T02:34:55,777   copying src/bioregistry/data/external/ecoportal/raw.json -> build/lib/bioregistry/data/external/ecoportal
2023-10-09T02:34:55,778   creating build/lib/bioregistry/data/external/edam
2023-10-09T02:34:55,778   copying src/bioregistry/data/external/edam/curation.tsv -> build/lib/bioregistry/data/external/edam
2023-10-09T02:34:55,779   copying src/bioregistry/data/external/edam/processed.json -> build/lib/bioregistry/data/external/edam
2023-10-09T02:34:55,780   creating build/lib/bioregistry/data/external/fairsharing
2023-10-09T02:34:55,780   copying src/bioregistry/data/external/fairsharing/README.md -> build/lib/bioregistry/data/external/fairsharing
2023-10-09T02:34:55,781   copying src/bioregistry/data/external/fairsharing/curation.tsv -> build/lib/bioregistry/data/external/fairsharing
2023-10-09T02:34:55,781   copying src/bioregistry/data/external/fairsharing/processed.json -> build/lib/bioregistry/data/external/fairsharing
2023-10-09T02:34:55,782   creating build/lib/bioregistry/data/external/go
2023-10-09T02:34:55,782   copying src/bioregistry/data/external/go/curation.tsv -> build/lib/bioregistry/data/external/go
2023-10-09T02:34:55,784   copying src/bioregistry/data/external/go/processed.json -> build/lib/bioregistry/data/external/go
2023-10-09T02:34:55,787   copying src/bioregistry/data/external/go/raw.yml -> build/lib/bioregistry/data/external/go
2023-10-09T02:34:55,789   creating build/lib/bioregistry/data/external/hl7
2023-10-09T02:34:55,790   copying src/bioregistry/data/external/hl7/curation.tsv -> build/lib/bioregistry/data/external/hl7
2023-10-09T02:34:55,791   creating build/lib/bioregistry/data/external/miriam
2023-10-09T02:34:55,792   copying src/bioregistry/data/external/miriam/processed.json -> build/lib/bioregistry/data/external/miriam
2023-10-09T02:34:55,792   copying src/bioregistry/data/external/miriam/raw.json -> build/lib/bioregistry/data/external/miriam
2023-10-09T02:34:55,800   creating build/lib/bioregistry/data/external/n2t
2023-10-09T02:34:55,801   copying src/bioregistry/data/external/n2t/processed.json -> build/lib/bioregistry/data/external/n2t
2023-10-09T02:34:55,805   copying src/bioregistry/data/external/n2t/raw.yml -> build/lib/bioregistry/data/external/n2t
2023-10-09T02:34:55,810   creating build/lib/bioregistry/data/external/ncbi
2023-10-09T02:34:55,817   copying src/bioregistry/data/external/ncbi/curation.tsv -> build/lib/bioregistry/data/external/ncbi
2023-10-09T02:34:55,818   copying src/bioregistry/data/external/ncbi/processed.json -> build/lib/bioregistry/data/external/ncbi
2023-10-09T02:34:55,819   copying src/bioregistry/data/external/ncbi/raw.html -> build/lib/bioregistry/data/external/ncbi
2023-10-09T02:34:55,820   creating build/lib/bioregistry/data/external/obofoundry
2023-10-09T02:34:55,821   copying src/bioregistry/data/external/obofoundry/processed.json -> build/lib/bioregistry/data/external/obofoundry
2023-10-09T02:34:55,822   copying src/bioregistry/data/external/obofoundry/raw.yaml -> build/lib/bioregistry/data/external/obofoundry
2023-10-09T02:34:55,822   creating build/lib/bioregistry/data/external/ols
2023-10-09T02:34:55,832   copying src/bioregistry/data/external/ols/processed.json -> build/lib/bioregistry/data/external/ols
2023-10-09T02:34:55,833   copying src/bioregistry/data/external/ols/raw.json -> build/lib/bioregistry/data/external/ols
2023-10-09T02:34:55,834   creating build/lib/bioregistry/data/external/ontobee
2023-10-09T02:34:55,836   copying src/bioregistry/data/external/ontobee/curation.tsv -> build/lib/bioregistry/data/external/ontobee
2023-10-09T02:34:55,836   copying src/bioregistry/data/external/ontobee/processed.json -> build/lib/bioregistry/data/external/ontobee
2023-10-09T02:34:55,837   copying src/bioregistry/data/external/ontobee/raw.html -> build/lib/bioregistry/data/external/ontobee
2023-10-09T02:34:55,838   creating build/lib/bioregistry/data/external/prefixcommons
2023-10-09T02:34:55,839   copying src/bioregistry/data/external/prefixcommons/curation.tsv -> build/lib/bioregistry/data/external/prefixcommons
2023-10-09T02:34:55,840   copying src/bioregistry/data/external/prefixcommons/processed.json -> build/lib/bioregistry/data/external/prefixcommons
2023-10-09T02:34:55,840   copying src/bioregistry/data/external/prefixcommons/raw.tsv -> build/lib/bioregistry/data/external/prefixcommons
2023-10-09T02:34:55,841   creating build/lib/bioregistry/data/external/re3data
2023-10-09T02:34:55,841   copying src/bioregistry/data/external/re3data/curation.tsv -> build/lib/bioregistry/data/external/re3data
2023-10-09T02:34:55,842   copying src/bioregistry/data/external/re3data/processed.json -> build/lib/bioregistry/data/external/re3data
2023-10-09T02:34:55,876   creating build/lib/bioregistry/data/external/uniprot
2023-10-09T02:34:55,877   copying src/bioregistry/data/external/uniprot/curation.tsv -> build/lib/bioregistry/data/external/uniprot
2023-10-09T02:34:55,879   copying src/bioregistry/data/external/uniprot/processed.json -> build/lib/bioregistry/data/external/uniprot
2023-10-09T02:34:55,883   copying src/bioregistry/data/external/uniprot/raw.json -> build/lib/bioregistry/data/external/uniprot
2023-10-09T02:34:55,887   creating build/lib/bioregistry/data/external/wikidata
2023-10-09T02:34:55,887   copying src/bioregistry/data/external/wikidata/curation.tsv -> build/lib/bioregistry/data/external/wikidata
2023-10-09T02:34:55,892   copying src/bioregistry/data/external/wikidata/processed.json -> build/lib/bioregistry/data/external/wikidata
2023-10-09T02:34:55,899   copying src/bioregistry/schema/schema.json -> build/lib/bioregistry/schema
2023-10-09T02:34:55,903   creating build/lib/bioregistry/app/static
2023-10-09T02:34:55,904   copying src/bioregistry/app/static/logo.svg -> build/lib/bioregistry/app/static
2023-10-09T02:34:55,924   creating build/lib/bioregistry/app/templates
2023-10-09T02:34:55,925   copying src/bioregistry/app/templates/base.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,928   copying src/bioregistry/app/templates/collection.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,930   copying src/bioregistry/app/templates/collections.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,932   copying src/bioregistry/app/templates/context.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,935   copying src/bioregistry/app/templates/contexts.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,937   copying src/bioregistry/app/templates/contributor.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,940   copying src/bioregistry/app/templates/contributors.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,942   copying src/bioregistry/app/templates/home.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,945   copying src/bioregistry/app/templates/macros.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,948   copying src/bioregistry/app/templates/metaresource.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,950   copying src/bioregistry/app/templates/metaresources.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,953   copying src/bioregistry/app/templates/prose.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,955   copying src/bioregistry/app/templates/reference.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,957   copying src/bioregistry/app/templates/resource.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,960   copying src/bioregistry/app/templates/resources.html -> build/lib/bioregistry/app/templates
2023-10-09T02:34:55,962   creating build/lib/bioregistry/app/templates/highlights
2023-10-09T02:34:55,963   copying src/bioregistry/app/templates/highlights/keywords.html -> build/lib/bioregistry/app/templates/highlights
2023-10-09T02:34:55,965   copying src/bioregistry/app/templates/highlights/owners.html -> build/lib/bioregistry/app/templates/highlights
2023-10-09T02:34:55,967   copying src/bioregistry/app/templates/highlights/relations.html -> build/lib/bioregistry/app/templates/highlights
2023-10-09T02:34:55,969   copying src/bioregistry/app/templates/highlights/twitter.html -> build/lib/bioregistry/app/templates/highlights
2023-10-09T02:34:55,971   creating build/lib/bioregistry/app/templates/meta
2023-10-09T02:34:55,973   copying src/bioregistry/app/templates/meta/access.html -> build/lib/bioregistry/app/templates/meta
2023-10-09T02:34:55,975   copying src/bioregistry/app/templates/meta/acknowledgements.html -> build/lib/bioregistry/app/templates/meta
2023-10-09T02:34:55,978   copying src/bioregistry/app/templates/meta/download.html -> build/lib/bioregistry/app/templates/meta
2023-10-09T02:34:55,980   copying src/bioregistry/app/templates/meta/related.html -> build/lib/bioregistry/app/templates/meta
2023-10-09T02:34:55,983   copying src/bioregistry/app/templates/meta/schema.html -> build/lib/bioregistry/app/templates/meta
2023-10-09T02:34:55,985   copying src/bioregistry/app/templates/meta/summary.html -> build/lib/bioregistry/app/templates/meta
2023-10-09T02:34:55,988   copying src/bioregistry/app/templates/meta/sustainability.html -> build/lib/bioregistry/app/templates/meta
2023-10-09T02:34:55,991   creating build/lib/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:55,991   copying src/bioregistry/app/templates/resolve_errors/disallowed_identifier.html -> build/lib/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:55,994   copying src/bioregistry/app/templates/resolve_errors/invalid_identifier.html -> build/lib/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:55,996   copying src/bioregistry/app/templates/resolve_errors/missing_prefix.html -> build/lib/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:55,998   copying src/bioregistry/app/templates/resolve_errors/missing_providers.html -> build/lib/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:56,000   copying src/bioregistry/external/scicrunch/input.tsv -> build/lib/bioregistry/external/scicrunch
2023-10-09T02:34:56,169   copying src/bioregistry/external/hl7/OID_Report.csv -> build/lib/bioregistry/external/hl7
2023-10-09T02:34:56,195   installing to build/bdist.linux-armv7l/wheel
2023-10-09T02:34:56,196   running install
2023-10-09T02:34:56,220   running install_lib
2023-10-09T02:34:56,226   creating build/bdist.linux-armv7l
2023-10-09T02:34:56,227   creating build/bdist.linux-armv7l/wheel
2023-10-09T02:34:56,229   creating build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:56,230   copying build/lib/bioregistry/constants.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:56,234   creating build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:56,235   copying build/lib/bioregistry/data/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:56,238   copying build/lib/bioregistry/data/contexts.json -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:56,240   copying build/lib/bioregistry/data/README.md -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:56,243   copying build/lib/bioregistry/data/processing_biolink.json -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:56,245   copying build/lib/bioregistry/data/processing_ols.json -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:56,251   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external
2023-10-09T02:34:56,254   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/fairsharing
2023-10-09T02:34:56,256   copying build/lib/bioregistry/data/external/fairsharing/README.md -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/fairsharing
2023-10-09T02:34:56,260   copying build/lib/bioregistry/data/external/fairsharing/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/fairsharing
2023-10-09T02:34:56,303   copying build/lib/bioregistry/data/external/fairsharing/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/fairsharing
2023-10-09T02:34:56,330   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/uniprot
2023-10-09T02:34:56,331   copying build/lib/bioregistry/data/external/uniprot/raw.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/uniprot
2023-10-09T02:34:56,339   copying build/lib/bioregistry/data/external/uniprot/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/uniprot
2023-10-09T02:34:56,349   copying build/lib/bioregistry/data/external/uniprot/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/uniprot
2023-10-09T02:34:56,362   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/bioportal
2023-10-09T02:34:56,366   copying build/lib/bioregistry/data/external/bioportal/raw.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/bioportal
2023-10-09T02:34:56,451   copying build/lib/bioregistry/data/external/bioportal/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/bioportal
2023-10-09T02:34:56,463   copying build/lib/bioregistry/data/external/bioportal/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/bioportal
2023-10-09T02:34:56,483   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/wikidata
2023-10-09T02:34:56,486   copying build/lib/bioregistry/data/external/wikidata/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/wikidata
2023-10-09T02:34:56,493   copying build/lib/bioregistry/data/external/wikidata/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/wikidata
2023-10-09T02:34:56,514   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/edam
2023-10-09T02:34:56,518   copying build/lib/bioregistry/data/external/edam/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/edam
2023-10-09T02:34:56,526   copying build/lib/bioregistry/data/external/edam/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/edam
2023-10-09T02:34:56,534   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/n2t
2023-10-09T02:34:56,536   copying build/lib/bioregistry/data/external/n2t/raw.yml -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/n2t
2023-10-09T02:34:56,579   copying build/lib/bioregistry/data/external/n2t/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/n2t
2023-10-09T02:34:56,593   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/aberowl
2023-10-09T02:34:56,594   copying build/lib/bioregistry/data/external/aberowl/raw.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/aberowl
2023-10-09T02:34:56,624   copying build/lib/bioregistry/data/external/aberowl/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/aberowl
2023-10-09T02:34:56,633   copying build/lib/bioregistry/data/external/aberowl/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/aberowl
2023-10-09T02:34:56,649   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/agroportal
2023-10-09T02:34:56,650   copying build/lib/bioregistry/data/external/agroportal/raw.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/agroportal
2023-10-09T02:34:56,663   copying build/lib/bioregistry/data/external/agroportal/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/agroportal
2023-10-09T02:34:56,666   copying build/lib/bioregistry/data/external/agroportal/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/agroportal
2023-10-09T02:34:56,670   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/miriam
2023-10-09T02:34:56,672   copying build/lib/bioregistry/data/external/miriam/raw.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/miriam
2023-10-09T02:34:56,720   copying build/lib/bioregistry/data/external/miriam/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/miriam
2023-10-09T02:34:56,731   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/re3data
2023-10-09T02:34:56,733   copying build/lib/bioregistry/data/external/re3data/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/re3data
2023-10-09T02:34:56,766   copying build/lib/bioregistry/data/external/re3data/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/re3data
2023-10-09T02:34:56,811   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/biocontext
2023-10-09T02:34:56,812   copying build/lib/bioregistry/data/external/biocontext/raw.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/biocontext
2023-10-09T02:34:56,816   copying build/lib/bioregistry/data/external/biocontext/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/biocontext
2023-10-09T02:34:56,818   copying build/lib/bioregistry/data/external/biocontext/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/biocontext
2023-10-09T02:34:56,823   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/ecoportal
2023-10-09T02:34:56,824   copying build/lib/bioregistry/data/external/ecoportal/raw.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ecoportal
2023-10-09T02:34:56,829   copying build/lib/bioregistry/data/external/ecoportal/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ecoportal
2023-10-09T02:34:56,832   copying build/lib/bioregistry/data/external/ecoportal/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ecoportal
2023-10-09T02:34:56,835   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/go
2023-10-09T02:34:56,836   copying build/lib/bioregistry/data/external/go/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/go
2023-10-09T02:34:56,839   copying build/lib/bioregistry/data/external/go/raw.yml -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/go
2023-10-09T02:34:56,843   copying build/lib/bioregistry/data/external/go/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/go
2023-10-09T02:34:56,849   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/ontobee
2023-10-09T02:34:56,850   copying build/lib/bioregistry/data/external/ontobee/raw.html -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ontobee
2023-10-09T02:34:56,856   copying build/lib/bioregistry/data/external/ontobee/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ontobee
2023-10-09T02:34:56,859   copying build/lib/bioregistry/data/external/ontobee/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ontobee
2023-10-09T02:34:56,862   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/ols
2023-10-09T02:34:56,863   copying build/lib/bioregistry/data/external/ols/raw.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ols
2023-10-09T02:34:56,876   copying build/lib/bioregistry/data/external/ols/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ols
2023-10-09T02:34:56,881   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/prefixcommons
2023-10-09T02:34:56,882   copying build/lib/bioregistry/data/external/prefixcommons/raw.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/prefixcommons
2023-10-09T02:34:56,904   copying build/lib/bioregistry/data/external/prefixcommons/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/prefixcommons
2023-10-09T02:34:56,908   copying build/lib/bioregistry/data/external/prefixcommons/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/prefixcommons
2023-10-09T02:34:56,920   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/biolink
2023-10-09T02:34:56,921   copying build/lib/bioregistry/data/external/biolink/raw.yaml -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/biolink
2023-10-09T02:34:56,930   copying build/lib/bioregistry/data/external/biolink/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/biolink
2023-10-09T02:34:56,933   copying build/lib/bioregistry/data/external/biolink/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/biolink
2023-10-09T02:34:56,936   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/obofoundry
2023-10-09T02:34:56,937   copying build/lib/bioregistry/data/external/obofoundry/raw.yaml -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/obofoundry
2023-10-09T02:34:56,946   copying build/lib/bioregistry/data/external/obofoundry/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/obofoundry
2023-10-09T02:34:56,952   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/cheminf
2023-10-09T02:34:56,953   copying build/lib/bioregistry/data/external/cheminf/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/cheminf
2023-10-09T02:34:56,955   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/bartoc
2023-10-09T02:34:56,956   copying build/lib/bioregistry/data/external/bartoc/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/bartoc
2023-10-09T02:34:56,984   copying build/lib/bioregistry/data/external/bartoc/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/bartoc
2023-10-09T02:34:57,018   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/cropoct
2023-10-09T02:34:57,019   copying build/lib/bioregistry/data/external/cropoct/raw.yaml -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/cropoct
2023-10-09T02:34:57,022   copying build/lib/bioregistry/data/external/cropoct/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/cropoct
2023-10-09T02:34:57,024   copying build/lib/bioregistry/data/external/cropoct/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/cropoct
2023-10-09T02:34:57,026   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/cellosaurus
2023-10-09T02:34:57,027   copying build/lib/bioregistry/data/external/cellosaurus/raw.txt -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/cellosaurus
2023-10-09T02:34:57,030   copying build/lib/bioregistry/data/external/cellosaurus/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/cellosaurus
2023-10-09T02:34:57,032   copying build/lib/bioregistry/data/external/cellosaurus/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/cellosaurus
2023-10-09T02:34:57,035   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/hl7
2023-10-09T02:34:57,036   copying build/lib/bioregistry/data/external/hl7/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/hl7
2023-10-09T02:34:57,042   creating build/bdist.linux-armv7l/wheel/bioregistry/data/external/ncbi
2023-10-09T02:34:57,042   copying build/lib/bioregistry/data/external/ncbi/raw.html -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ncbi
2023-10-09T02:34:57,047   copying build/lib/bioregistry/data/external/ncbi/curation.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ncbi
2023-10-09T02:34:57,049   copying build/lib/bioregistry/data/external/ncbi/processed.json -> build/bdist.linux-armv7l/wheel/bioregistry/data/external/ncbi
2023-10-09T02:34:57,051   copying build/lib/bioregistry/data/collections.json -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:57,054   copying build/lib/bioregistry/data/processing_wikidata.json -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:57,055   copying build/lib/bioregistry/data/processing_go.json -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:57,057   copying build/lib/bioregistry/data/mismatch.json -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:57,059   copying build/lib/bioregistry/data/metaregistry.json -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:57,062   copying build/lib/bioregistry/data/bioregistry.json -> build/bdist.linux-armv7l/wheel/bioregistry/data
2023-10-09T02:34:57,143   copying build/lib/bioregistry/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,145   copying build/lib/bioregistry/uri_format.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,147   copying build/lib/bioregistry/py.typed -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,148   copying build/lib/bioregistry/cli.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,150   copying build/lib/bioregistry/record_accumulator.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,153   creating build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,154   copying build/lib/bioregistry/curation/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,156   copying build/lib/bioregistry/curation/suggest_author_curation.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,158   copying build/lib/bioregistry/curation/clean_name_suffixes.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,159   copying build/lib/bioregistry/curation/import_pc_semiautomatic.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,161   copying build/lib/bioregistry/curation/map_bartoc_via_wikidata.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,163   copying build/lib/bioregistry/curation/add_descriptions_from_gs.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,165   copying build/lib/bioregistry/curation/suggest_uniprot_providers.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,166   copying build/lib/bioregistry/curation/add_examples.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,168   copying build/lib/bioregistry/curation/enrich_publications.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,170   copying build/lib/bioregistry/curation/add_examples_from_ols.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,172   copying build/lib/bioregistry/curation/clean_publications.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,174   copying build/lib/bioregistry/curation/deprecation_diff.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,175   copying build/lib/bioregistry/curation/map_re3data_via_fairsharing.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,177   copying build/lib/bioregistry/curation/add_co_providers.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,179   copying build/lib/bioregistry/curation/review_pc.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,181   copying build/lib/bioregistry/curation/bulk_import.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,183   copying build/lib/bioregistry/curation/cleanup_authors.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,185   copying build/lib/bioregistry/curation/fix_obo_purls.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,186   copying build/lib/bioregistry/curation/clean_licenses.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,188   copying build/lib/bioregistry/curation/add_examples_from_javert.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,190   copying build/lib/bioregistry/curation/rename_metaprefix.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,192   copying build/lib/bioregistry/curation/add_ontology_regexes.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,193   copying build/lib/bioregistry/curation/make_description_curation_sheet.py -> build/bdist.linux-armv7l/wheel/bioregistry/curation
2023-10-09T02:34:57,196   creating build/bdist.linux-armv7l/wheel/bioregistry/schema
2023-10-09T02:34:57,197   copying build/lib/bioregistry/schema/constants.py -> build/bdist.linux-armv7l/wheel/bioregistry/schema
2023-10-09T02:34:57,200   copying build/lib/bioregistry/schema/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/schema
2023-10-09T02:34:57,201   copying build/lib/bioregistry/schema/utils.py -> build/bdist.linux-armv7l/wheel/bioregistry/schema
2023-10-09T02:34:57,204   copying build/lib/bioregistry/schema/struct.py -> build/bdist.linux-armv7l/wheel/bioregistry/schema
2023-10-09T02:34:57,208   copying build/lib/bioregistry/schema/schema.json -> build/bdist.linux-armv7l/wheel/bioregistry/schema
2023-10-09T02:34:57,212   creating build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,213   copying build/lib/bioregistry/align/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,215   copying build/lib/bioregistry/align/ecoportal.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,216   copying build/lib/bioregistry/align/bartoc.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,218   copying build/lib/bioregistry/align/rrid.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,220   copying build/lib/bioregistry/align/miriam.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,222   copying build/lib/bioregistry/align/bioportal.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,223   copying build/lib/bioregistry/align/wikidata.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,225   copying build/lib/bioregistry/align/fairsharing.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,227   copying build/lib/bioregistry/align/utils.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,229   copying build/lib/bioregistry/align/uniprot.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,231   copying build/lib/bioregistry/align/edam.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,233   copying build/lib/bioregistry/align/re3data.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,235   copying build/lib/bioregistry/align/obofoundry.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,237   copying build/lib/bioregistry/align/ols.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,238   copying build/lib/bioregistry/align/biolink.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,240   copying build/lib/bioregistry/align/prefixcommons.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,242   copying build/lib/bioregistry/align/cropoct.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,244   copying build/lib/bioregistry/align/n2t.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,246   copying build/lib/bioregistry/align/biocontext.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,248   copying build/lib/bioregistry/align/ontobee.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,249   copying build/lib/bioregistry/align/agroportal.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,251   copying build/lib/bioregistry/align/cheminf.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,253   copying build/lib/bioregistry/align/go.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,255   copying build/lib/bioregistry/align/hl7.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,257   copying build/lib/bioregistry/align/ncbi.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,258   copying build/lib/bioregistry/align/cellosaurus.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,260   copying build/lib/bioregistry/align/aberowl.py -> build/bdist.linux-armv7l/wheel/bioregistry/align
2023-10-09T02:34:57,262   copying build/lib/bioregistry/summary.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,265   copying build/lib/bioregistry/utils.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,267   creating build/bdist.linux-armv7l/wheel/bioregistry/gh
2023-10-09T02:34:57,269   copying build/lib/bioregistry/gh/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/gh
2023-10-09T02:34:57,271   copying build/lib/bioregistry/gh/new_prefix.py -> build/bdist.linux-armv7l/wheel/bioregistry/gh
2023-10-09T02:34:57,273   copying build/lib/bioregistry/gh/github_client.py -> build/bdist.linux-armv7l/wheel/bioregistry/gh
2023-10-09T02:34:57,276   creating build/bdist.linux-armv7l/wheel/bioregistry/health
2023-10-09T02:34:57,280   copying build/lib/bioregistry/health/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/health
2023-10-09T02:34:57,282   copying build/lib/bioregistry/health/cli.py -> build/bdist.linux-armv7l/wheel/bioregistry/health
2023-10-09T02:34:57,284   copying build/lib/bioregistry/health/check_homepages.py -> build/bdist.linux-armv7l/wheel/bioregistry/health
2023-10-09T02:34:57,286   copying build/lib/bioregistry/health/check_providers.py -> build/bdist.linux-armv7l/wheel/bioregistry/health
2023-10-09T02:34:57,288   copying build/lib/bioregistry/health/__main__.py -> build/bdist.linux-armv7l/wheel/bioregistry/health
2023-10-09T02:34:57,289   copying build/lib/bioregistry/lint.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,292   creating build/bdist.linux-armv7l/wheel/bioregistry/benchmarks
2023-10-09T02:34:57,293   copying build/lib/bioregistry/benchmarks/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/benchmarks
2023-10-09T02:34:57,295   copying build/lib/bioregistry/benchmarks/cli.py -> build/bdist.linux-armv7l/wheel/bioregistry/benchmarks
2023-10-09T02:34:57,296   copying build/lib/bioregistry/benchmarks/curie_validation.py -> build/bdist.linux-armv7l/wheel/bioregistry/benchmarks
2023-10-09T02:34:57,298   copying build/lib/bioregistry/benchmarks/uri_parsing.py -> build/bdist.linux-armv7l/wheel/bioregistry/benchmarks
2023-10-09T02:34:57,300   copying build/lib/bioregistry/benchmarks/__main__.py -> build/bdist.linux-armv7l/wheel/bioregistry/benchmarks
2023-10-09T02:34:57,302   copying build/lib/bioregistry/benchmarks/curie_parsing.py -> build/bdist.linux-armv7l/wheel/bioregistry/benchmarks
2023-10-09T02:34:57,304   copying build/lib/bioregistry/parse_version_iri.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,306   copying build/lib/bioregistry/pandas.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,310   creating build/bdist.linux-armv7l/wheel/bioregistry/analysis
2023-10-09T02:34:57,311   copying build/lib/bioregistry/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/analysis
2023-10-09T02:34:57,313   copying build/lib/bioregistry/analysis/title_tfidf.py -> build/bdist.linux-armv7l/wheel/bioregistry/analysis
2023-10-09T02:34:57,315   copying build/lib/bioregistry/resource_manager.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,319   copying build/lib/bioregistry/collection_api.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,321   copying build/lib/bioregistry/bibliometrics.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,323   copying build/lib/bioregistry/resolve_identifier.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,325   copying build/lib/bioregistry/metaresource_api.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,328   copying build/lib/bioregistry/resolve.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,331   copying build/lib/bioregistry/compare.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,334   copying build/lib/bioregistry/license_standardizer.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,336   copying build/lib/bioregistry/__main__.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,339   creating build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,341   copying build/lib/bioregistry/external/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,343   copying build/lib/bioregistry/external/bartoc.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,345   copying build/lib/bioregistry/external/miriam.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,348   copying build/lib/bioregistry/external/bioportal.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,351   copying build/lib/bioregistry/external/wikidata.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,354   copying build/lib/bioregistry/external/fairsharing.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,357   copying build/lib/bioregistry/external/uniprot.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,359   copying build/lib/bioregistry/external/edam.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,361   copying build/lib/bioregistry/external/re3data.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,364   copying build/lib/bioregistry/external/obofoundry.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,367   creating build/bdist.linux-armv7l/wheel/bioregistry/external/scicrunch
2023-10-09T02:34:57,369   copying build/lib/bioregistry/external/scicrunch/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/external/scicrunch
2023-10-09T02:34:57,371   copying build/lib/bioregistry/external/scicrunch/input.tsv -> build/bdist.linux-armv7l/wheel/bioregistry/external/scicrunch
2023-10-09T02:34:57,558   copying build/lib/bioregistry/external/ols.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,561   copying build/lib/bioregistry/external/biolink.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,563   copying build/lib/bioregistry/external/prefixcommons.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,565   copying build/lib/bioregistry/external/cropoct.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,567   copying build/lib/bioregistry/external/n2t.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,570   copying build/lib/bioregistry/external/biocontext.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,572   copying build/lib/bioregistry/external/ontobee.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,574   copying build/lib/bioregistry/external/cheminf.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,576   copying build/lib/bioregistry/external/go.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,578   copying build/lib/bioregistry/external/ncbi.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,581   creating build/bdist.linux-armv7l/wheel/bioregistry/external/hl7
2023-10-09T02:34:57,582   copying build/lib/bioregistry/external/hl7/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/external/hl7
2023-10-09T02:34:57,585   copying build/lib/bioregistry/external/hl7/OID_Report.csv -> build/bdist.linux-armv7l/wheel/bioregistry/external/hl7
2023-10-09T02:34:57,592   copying build/lib/bioregistry/external/cellosaurus.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,594   copying build/lib/bioregistry/external/aberowl.py -> build/bdist.linux-armv7l/wheel/bioregistry/external
2023-10-09T02:34:57,596   copying build/lib/bioregistry/schema_utils.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,599   copying build/lib/bioregistry/version.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,601   copying build/lib/bioregistry/parse_iri.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,603   copying build/lib/bioregistry/upload_ndex.py -> build/bdist.linux-armv7l/wheel/bioregistry
2023-10-09T02:34:57,606   creating build/bdist.linux-armv7l/wheel/bioregistry/export
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2023-10-09T02:34:57,610   copying build/lib/bioregistry/export/cli.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,612   copying build/lib/bioregistry/export/prefix_maps.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,615   copying build/lib/bioregistry/export/warnings_export.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,618   copying build/lib/bioregistry/export/yaml_export.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,620   copying build/lib/bioregistry/export/rdf_export.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,622   copying build/lib/bioregistry/export/schema_export.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,624   copying build/lib/bioregistry/export/sssom_export.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,627   copying build/lib/bioregistry/export/__main__.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,629   copying build/lib/bioregistry/export/tables_export.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,631   copying build/lib/bioregistry/export/tsv_export.py -> build/bdist.linux-armv7l/wheel/bioregistry/export
2023-10-09T02:34:57,634   creating build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,635   copying build/lib/bioregistry/app/constants.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,637   copying build/lib/bioregistry/app/__init__.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,640   creating build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,641   copying build/lib/bioregistry/app/templates/reference.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,644   copying build/lib/bioregistry/app/templates/macros.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,646   copying build/lib/bioregistry/app/templates/context.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,649   copying build/lib/bioregistry/app/templates/metaresource.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,652   copying build/lib/bioregistry/app/templates/resource.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,655   copying build/lib/bioregistry/app/templates/base.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,658   creating build/bdist.linux-armv7l/wheel/bioregistry/app/templates/highlights
2023-10-09T02:34:57,659   copying build/lib/bioregistry/app/templates/highlights/keywords.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/highlights
2023-10-09T02:34:57,661   copying build/lib/bioregistry/app/templates/highlights/twitter.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/highlights
2023-10-09T02:34:57,664   copying build/lib/bioregistry/app/templates/highlights/relations.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/highlights
2023-10-09T02:34:57,666   copying build/lib/bioregistry/app/templates/highlights/owners.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/highlights
2023-10-09T02:34:57,668   copying build/lib/bioregistry/app/templates/contexts.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,670   copying build/lib/bioregistry/app/templates/home.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,673   copying build/lib/bioregistry/app/templates/contributor.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,676   copying build/lib/bioregistry/app/templates/collections.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,678   creating build/bdist.linux-armv7l/wheel/bioregistry/app/templates/meta
2023-10-09T02:34:57,680   copying build/lib/bioregistry/app/templates/meta/acknowledgements.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/meta
2023-10-09T02:34:57,683   copying build/lib/bioregistry/app/templates/meta/schema.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/meta
2023-10-09T02:34:57,685   copying build/lib/bioregistry/app/templates/meta/related.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/meta
2023-10-09T02:34:57,688   copying build/lib/bioregistry/app/templates/meta/summary.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/meta
2023-10-09T02:34:57,691   copying build/lib/bioregistry/app/templates/meta/access.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/meta
2023-10-09T02:34:57,693   copying build/lib/bioregistry/app/templates/meta/download.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/meta
2023-10-09T02:34:57,696   copying build/lib/bioregistry/app/templates/meta/sustainability.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/meta
2023-10-09T02:34:57,699   copying build/lib/bioregistry/app/templates/collection.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,701   copying build/lib/bioregistry/app/templates/contributors.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,703   copying build/lib/bioregistry/app/templates/resources.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,706   copying build/lib/bioregistry/app/templates/prose.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,708   creating build/bdist.linux-armv7l/wheel/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:57,710   copying build/lib/bioregistry/app/templates/resolve_errors/missing_prefix.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:57,712   copying build/lib/bioregistry/app/templates/resolve_errors/missing_providers.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:57,714   copying build/lib/bioregistry/app/templates/resolve_errors/invalid_identifier.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:57,717   copying build/lib/bioregistry/app/templates/resolve_errors/disallowed_identifier.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates/resolve_errors
2023-10-09T02:34:57,719   copying build/lib/bioregistry/app/templates/metaresources.html -> build/bdist.linux-armv7l/wheel/bioregistry/app/templates
2023-10-09T02:34:57,721   copying build/lib/bioregistry/app/cli.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,723   creating build/bdist.linux-armv7l/wheel/bioregistry/app/static
2023-10-09T02:34:57,725   copying build/lib/bioregistry/app/static/logo.svg -> build/bdist.linux-armv7l/wheel/bioregistry/app/static
2023-10-09T02:34:57,739   copying build/lib/bioregistry/app/utils.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,741   copying build/lib/bioregistry/app/test.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,743   copying build/lib/bioregistry/app/proxies.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,745   copying build/lib/bioregistry/app/ui.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,748   copying build/lib/bioregistry/app/api.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,750   copying build/lib/bioregistry/app/impl.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,753   copying build/lib/bioregistry/app/wsgi.py -> build/bdist.linux-armv7l/wheel/bioregistry/app
2023-10-09T02:34:57,754   running install_egg_info
2023-10-09T02:34:57,765   Copying src/bioregistry.egg-info to build/bdist.linux-armv7l/wheel/bioregistry-0.10.55-py3.11.egg-info
2023-10-09T02:34:57,780   running install_scripts
2023-10-09T02:34:57,811   creating build/bdist.linux-armv7l/wheel/bioregistry-0.10.55.dist-info/WHEEL
2023-10-09T02:34:57,814   creating '/tmp/pip-wheel-brlrgkf2/.tmp-8p2a0sts/bioregistry-0.10.55-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-10-09T02:34:57,817   adding 'bioregistry/__init__.py'
2023-10-09T02:34:57,818   adding 'bioregistry/__main__.py'
2023-10-09T02:34:57,819   adding 'bioregistry/bibliometrics.py'
2023-10-09T02:34:57,821   adding 'bioregistry/cli.py'
2023-10-09T02:34:57,822   adding 'bioregistry/collection_api.py'
2023-10-09T02:34:57,825   adding 'bioregistry/compare.py'
2023-10-09T02:34:57,827   adding 'bioregistry/constants.py'
2023-10-09T02:34:57,828   adding 'bioregistry/license_standardizer.py'
2023-10-09T02:34:57,830   adding 'bioregistry/lint.py'
2023-10-09T02:34:57,831   adding 'bioregistry/metaresource_api.py'
2023-10-09T02:34:57,833   adding 'bioregistry/pandas.py'
2023-10-09T02:34:57,835   adding 'bioregistry/parse_iri.py'
2023-10-09T02:34:57,836   adding 'bioregistry/parse_version_iri.py'
2023-10-09T02:34:57,837   adding 'bioregistry/py.typed'
2023-10-09T02:34:57,839   adding 'bioregistry/record_accumulator.py'
2023-10-09T02:34:57,843   adding 'bioregistry/resolve.py'
2023-10-09T02:34:57,845   adding 'bioregistry/resolve_identifier.py'
2023-10-09T02:34:57,852   adding 'bioregistry/resource_manager.py'
2023-10-09T02:34:57,854   adding 'bioregistry/schema_utils.py'
2023-10-09T02:34:57,856   adding 'bioregistry/summary.py'
2023-10-09T02:34:57,858   adding 'bioregistry/upload_ndex.py'
2023-10-09T02:34:57,859   adding 'bioregistry/uri_format.py'
2023-10-09T02:34:57,861   adding 'bioregistry/utils.py'
2023-10-09T02:34:57,862   adding 'bioregistry/version.py'
2023-10-09T02:34:57,864   adding 'bioregistry/align/__init__.py'
2023-10-09T02:34:57,865   adding 'bioregistry/align/aberowl.py'
2023-10-09T02:34:57,866   adding 'bioregistry/align/agroportal.py'
2023-10-09T02:34:57,867   adding 'bioregistry/align/bartoc.py'
2023-10-09T02:34:57,869   adding 'bioregistry/align/biocontext.py'
2023-10-09T02:34:57,870   adding 'bioregistry/align/biolink.py'
2023-10-09T02:34:57,871   adding 'bioregistry/align/bioportal.py'
2023-10-09T02:34:57,872   adding 'bioregistry/align/cellosaurus.py'
2023-10-09T02:34:57,874   adding 'bioregistry/align/cheminf.py'
2023-10-09T02:34:57,875   adding 'bioregistry/align/cropoct.py'
2023-10-09T02:34:57,876   adding 'bioregistry/align/ecoportal.py'
2023-10-09T02:34:57,877   adding 'bioregistry/align/edam.py'
2023-10-09T02:34:57,878   adding 'bioregistry/align/fairsharing.py'
2023-10-09T02:34:57,880   adding 'bioregistry/align/go.py'
2023-10-09T02:34:57,881   adding 'bioregistry/align/hl7.py'
2023-10-09T02:34:57,882   adding 'bioregistry/align/miriam.py'
2023-10-09T02:34:57,883   adding 'bioregistry/align/n2t.py'
2023-10-09T02:34:57,884   adding 'bioregistry/align/ncbi.py'
2023-10-09T02:34:57,886   adding 'bioregistry/align/obofoundry.py'
2023-10-09T02:34:57,887   adding 'bioregistry/align/ols.py'
2023-10-09T02:34:57,888   adding 'bioregistry/align/ontobee.py'
2023-10-09T02:34:57,889   adding 'bioregistry/align/prefixcommons.py'
2023-10-09T02:34:57,890   adding 'bioregistry/align/re3data.py'
2023-10-09T02:34:57,892   adding 'bioregistry/align/rrid.py'
2023-10-09T02:34:57,893   adding 'bioregistry/align/uniprot.py'
2023-10-09T02:34:57,895   adding 'bioregistry/align/utils.py'
2023-10-09T02:34:57,896   adding 'bioregistry/align/wikidata.py'
2023-10-09T02:34:57,898   adding 'bioregistry/analysis/__init__.py'
2023-10-09T02:34:57,899   adding 'bioregistry/analysis/title_tfidf.py'
2023-10-09T02:34:57,901   adding 'bioregistry/app/__init__.py'
2023-10-09T02:34:57,903   adding 'bioregistry/app/api.py'
2023-10-09T02:34:57,905   adding 'bioregistry/app/cli.py'
2023-10-09T02:34:57,906   adding 'bioregistry/app/constants.py'
2023-10-09T02:34:57,908   adding 'bioregistry/app/impl.py'
2023-10-09T02:34:57,909   adding 'bioregistry/app/proxies.py'
2023-10-09T02:34:57,910   adding 'bioregistry/app/test.py'
2023-10-09T02:34:57,913   adding 'bioregistry/app/ui.py'
2023-10-09T02:34:57,914   adding 'bioregistry/app/utils.py'
2023-10-09T02:34:57,916   adding 'bioregistry/app/wsgi.py'
2023-10-09T02:34:58,030   adding 'bioregistry/app/static/logo.svg'
2023-10-09T02:34:58,039   adding 'bioregistry/app/templates/base.html'
2023-10-09T02:34:58,040   adding 'bioregistry/app/templates/collection.html'
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2023-10-09T02:34:58,065   adding 'bioregistry/app/templates/highlights/twitter.html'
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2023-10-09T02:34:58,086   adding 'bioregistry/benchmarks/__init__.py'
2023-10-09T02:34:58,087   adding 'bioregistry/benchmarks/__main__.py'
2023-10-09T02:34:58,088   adding 'bioregistry/benchmarks/cli.py'
2023-10-09T02:34:58,089   adding 'bioregistry/benchmarks/curie_parsing.py'
2023-10-09T02:34:58,091   adding 'bioregistry/benchmarks/curie_validation.py'
2023-10-09T02:34:58,092   adding 'bioregistry/benchmarks/uri_parsing.py'
2023-10-09T02:34:58,094   adding 'bioregistry/curation/__init__.py'
2023-10-09T02:34:58,096   adding 'bioregistry/curation/add_co_providers.py'
2023-10-09T02:34:58,097   adding 'bioregistry/curation/add_descriptions_from_gs.py'
2023-10-09T02:34:58,098   adding 'bioregistry/curation/add_examples.py'
2023-10-09T02:34:58,099   adding 'bioregistry/curation/add_examples_from_javert.py'
2023-10-09T02:34:58,101   adding 'bioregistry/curation/add_examples_from_ols.py'
2023-10-09T02:34:58,102   adding 'bioregistry/curation/add_ontology_regexes.py'
2023-10-09T02:34:58,104   adding 'bioregistry/curation/bulk_import.py'
2023-10-09T02:34:58,105   adding 'bioregistry/curation/clean_licenses.py'
2023-10-09T02:34:58,106   adding 'bioregistry/curation/clean_name_suffixes.py'
2023-10-09T02:34:58,107   adding 'bioregistry/curation/clean_publications.py'
2023-10-09T02:34:58,108   adding 'bioregistry/curation/cleanup_authors.py'
2023-10-09T02:34:58,110   adding 'bioregistry/curation/deprecation_diff.py'
2023-10-09T02:34:58,111   adding 'bioregistry/curation/enrich_publications.py'
2023-10-09T02:34:58,112   adding 'bioregistry/curation/fix_obo_purls.py'
2023-10-09T02:34:58,114   adding 'bioregistry/curation/import_pc_semiautomatic.py'
2023-10-09T02:34:58,115   adding 'bioregistry/curation/make_description_curation_sheet.py'
2023-10-09T02:34:58,116   adding 'bioregistry/curation/map_bartoc_via_wikidata.py'
2023-10-09T02:34:58,117   adding 'bioregistry/curation/map_re3data_via_fairsharing.py'
2023-10-09T02:34:58,118   adding 'bioregistry/curation/rename_metaprefix.py'
2023-10-09T02:34:58,120   adding 'bioregistry/curation/review_pc.py'
2023-10-09T02:34:58,121   adding 'bioregistry/curation/suggest_author_curation.py'
2023-10-09T02:34:58,122   adding 'bioregistry/curation/suggest_uniprot_providers.py'
2023-10-09T02:34:58,124   adding 'bioregistry/data/README.md'
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2023-10-09T02:35:01,827   adding 'bioregistry/data/external/uniprot/curation.tsv'
2023-10-09T02:35:01,832   adding 'bioregistry/data/external/uniprot/processed.json'
2023-10-09T02:35:01,839   adding 'bioregistry/data/external/uniprot/raw.json'
2023-10-09T02:35:01,860   adding 'bioregistry/data/external/wikidata/curation.tsv'
2023-10-09T02:35:01,891   adding 'bioregistry/data/external/wikidata/processed.json'
2023-10-09T02:35:01,896   adding 'bioregistry/export/__init__.py'
2023-10-09T02:35:01,897   adding 'bioregistry/export/__main__.py'
2023-10-09T02:35:01,898   adding 'bioregistry/export/cli.py'
2023-10-09T02:35:01,900   adding 'bioregistry/export/prefix_maps.py'
2023-10-09T02:35:01,901   adding 'bioregistry/export/rdf_export.py'
2023-10-09T02:35:01,903   adding 'bioregistry/export/schema_export.py'
2023-10-09T02:35:01,904   adding 'bioregistry/export/sssom_export.py'
2023-10-09T02:35:01,906   adding 'bioregistry/export/tables_export.py'
2023-10-09T02:35:01,907   adding 'bioregistry/export/tsv_export.py'
2023-10-09T02:35:01,909   adding 'bioregistry/export/warnings_export.py'
2023-10-09T02:35:01,910   adding 'bioregistry/export/yaml_export.py'
2023-10-09T02:35:01,912   adding 'bioregistry/external/__init__.py'
2023-10-09T02:35:01,913   adding 'bioregistry/external/aberowl.py'
2023-10-09T02:35:01,914   adding 'bioregistry/external/bartoc.py'
2023-10-09T02:35:01,916   adding 'bioregistry/external/biocontext.py'
2023-10-09T02:35:01,917   adding 'bioregistry/external/biolink.py'
2023-10-09T02:35:01,918   adding 'bioregistry/external/bioportal.py'
2023-10-09T02:35:01,920   adding 'bioregistry/external/cellosaurus.py'
2023-10-09T02:35:01,921   adding 'bioregistry/external/cheminf.py'
2023-10-09T02:35:01,922   adding 'bioregistry/external/cropoct.py'
2023-10-09T02:35:01,924   adding 'bioregistry/external/edam.py'
2023-10-09T02:35:01,925   adding 'bioregistry/external/fairsharing.py'
2023-10-09T02:35:01,926   adding 'bioregistry/external/go.py'
2023-10-09T02:35:01,928   adding 'bioregistry/external/miriam.py'
2023-10-09T02:35:01,929   adding 'bioregistry/external/n2t.py'
2023-10-09T02:35:01,930   adding 'bioregistry/external/ncbi.py'
2023-10-09T02:35:01,932   adding 'bioregistry/external/obofoundry.py'
2023-10-09T02:35:01,934   adding 'bioregistry/external/ols.py'
2023-10-09T02:35:01,935   adding 'bioregistry/external/ontobee.py'
2023-10-09T02:35:01,936   adding 'bioregistry/external/prefixcommons.py'
2023-10-09T02:35:01,938   adding 'bioregistry/external/re3data.py'
2023-10-09T02:35:01,939   adding 'bioregistry/external/uniprot.py'
2023-10-09T02:35:01,941   adding 'bioregistry/external/wikidata.py'
2023-10-09T02:35:01,976   adding 'bioregistry/external/hl7/OID_Report.csv'
2023-10-09T02:35:01,980   adding 'bioregistry/external/hl7/__init__.py'
2023-10-09T02:35:01,981   adding 'bioregistry/external/scicrunch/__init__.py'
2023-10-09T02:35:03,075   adding 'bioregistry/external/scicrunch/input.tsv'
2023-10-09T02:35:03,163   adding 'bioregistry/gh/__init__.py'
2023-10-09T02:35:03,165   adding 'bioregistry/gh/github_client.py'
2023-10-09T02:35:03,167   adding 'bioregistry/gh/new_prefix.py'
2023-10-09T02:35:03,170   adding 'bioregistry/health/__init__.py'
2023-10-09T02:35:03,171   adding 'bioregistry/health/__main__.py'
2023-10-09T02:35:03,173   adding 'bioregistry/health/check_homepages.py'
2023-10-09T02:35:03,176   adding 'bioregistry/health/check_providers.py'
2023-10-09T02:35:03,178   adding 'bioregistry/health/cli.py'
2023-10-09T02:35:03,180   adding 'bioregistry/schema/__init__.py'
2023-10-09T02:35:03,183   adding 'bioregistry/schema/constants.py'
2023-10-09T02:35:03,187   adding 'bioregistry/schema/schema.json'
2023-10-09T02:35:03,199   adding 'bioregistry/schema/struct.py'
2023-10-09T02:35:03,201   adding 'bioregistry/schema/utils.py'
2023-10-09T02:35:03,203   adding 'bioregistry-0.10.55.dist-info/LICENSE'
2023-10-09T02:35:03,206   adding 'bioregistry-0.10.55.dist-info/METADATA'
2023-10-09T02:35:03,208   adding 'bioregistry-0.10.55.dist-info/WHEEL'
2023-10-09T02:35:03,209   adding 'bioregistry-0.10.55.dist-info/entry_points.txt'
2023-10-09T02:35:03,209   adding 'bioregistry-0.10.55.dist-info/top_level.txt'
2023-10-09T02:35:03,213   adding 'bioregistry-0.10.55.dist-info/RECORD'
2023-10-09T02:35:03,344   removing build/bdist.linux-armv7l/wheel
2023-10-09T02:35:03,540   Building wheel for bioregistry (pyproject.toml): finished with status 'done'
2023-10-09T02:35:03,786   Created wheel for bioregistry: filename=bioregistry-0.10.55-py3-none-any.whl size=10421323 sha256=8552ba2acad474861ae211a11530334a40114c9967c1d60b318b408a6248f9df
2023-10-09T02:35:03,788   Stored in directory: /tmp/pip-ephem-wheel-cache-j6kcgoww/wheels/07/e8/ad/dc07fa8d99ba1a291686f26ee9ea4080120dadbaba4efd1542
2023-10-09T02:35:03,815 Successfully built bioregistry
2023-10-09T02:35:04,084 Removed build tracker: '/tmp/pip-build-tracker-6dm2j8n7'