2023-10-19T20:26:22,178 Created temporary directory: /tmp/pip-build-tracker-thvnbado 2023-10-19T20:26:22,180 Initialized build tracking at /tmp/pip-build-tracker-thvnbado 2023-10-19T20:26:22,180 Created build tracker: /tmp/pip-build-tracker-thvnbado 2023-10-19T20:26:22,181 Entered build tracker: /tmp/pip-build-tracker-thvnbado 2023-10-19T20:26:22,181 Created temporary directory: /tmp/pip-wheel-f1_038q8 2023-10-19T20:26:22,184 Created temporary directory: /tmp/pip-ephem-wheel-cache-v87s_jax 2023-10-19T20:26:22,207 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-19T20:26:22,211 2 location(s) to search for versions of spectrafp: 2023-10-19T20:26:22,211 * https://pypi.org/simple/spectrafp/ 2023-10-19T20:26:22,211 * https://www.piwheels.org/simple/spectrafp/ 2023-10-19T20:26:22,211 Fetching project page and analyzing links: https://pypi.org/simple/spectrafp/ 2023-10-19T20:26:22,212 Getting page https://pypi.org/simple/spectrafp/ 2023-10-19T20:26:22,214 Found index url https://pypi.org/simple/ 2023-10-19T20:26:22,434 Fetched page https://pypi.org/simple/spectrafp/ as application/vnd.pypi.simple.v1+json 2023-10-19T20:26:22,436 Skipping link: No binaries permitted for spectrafp: https://files.pythonhosted.org/packages/3c/58/65581951ef13e045fa604b555d45a67796d79766cbd5b8ea160a06f6d9cd/SpectraFP-1.0.0-py3-none-any.whl (from https://pypi.org/simple/spectrafp/) 2023-10-19T20:26:22,437 Found link https://files.pythonhosted.org/packages/7a/4f/debfa233444c7e1b16cdc61a4ae4e3e49140ebcdbce4c9d631e16c6a08b4/SpectraFP-1.0.0.linux-x86_64.tar.gz (from https://pypi.org/simple/spectrafp/), version: 1.0.0.linux-x86_64 2023-10-19T20:26:22,438 Skipping link: No binaries permitted for spectrafp: https://files.pythonhosted.org/packages/43/33/9094a53e4b6fb1a2d98371e31262168fd2b870543d688800b7e25be3ac04/SpectraFP-1.0.1-py3-none-any.whl (from https://pypi.org/simple/spectrafp/) 2023-10-19T20:26:22,438 Found link https://files.pythonhosted.org/packages/57/4f/417aaeb44e80d2fe15af5c4b881369979dbd0b194104233940620d502ed2/SpectraFP-1.0.1.linux-x86_64.tar.gz (from https://pypi.org/simple/spectrafp/), version: 1.0.1.linux-x86_64 2023-10-19T20:26:22,439 Skipping link: No binaries permitted for spectrafp: https://files.pythonhosted.org/packages/ca/fd/3d8a83bb087f986b9516e063ab5196e4017e57052ef051f5804355743ec9/SpectraFP-1.0.2-py3-none-any.whl (from https://pypi.org/simple/spectrafp/) 2023-10-19T20:26:22,440 Found link https://files.pythonhosted.org/packages/b1/bb/da895bfdeeaed8caac2da4fbc8a1bba5e53a2f53bf6fe7a3206ae697f2b0/SpectraFP-1.0.2.tar.gz (from https://pypi.org/simple/spectrafp/), version: 1.0.2 2023-10-19T20:26:22,441 Skipping link: No binaries permitted for spectrafp: https://files.pythonhosted.org/packages/d4/3a/c3d92b95724c6297d56a7c81060066940c2b293084fbabb53edf34db7caf/SpectraFP-1.1.0-py3-none-any.whl (from https://pypi.org/simple/spectrafp/) 2023-10-19T20:26:22,441 Found link https://files.pythonhosted.org/packages/23/8b/09079285c09c6cf57ed72fb3ca968b74a4e849ea18537a07a29dbc736ba7/SpectraFP-1.1.0.tar.gz (from https://pypi.org/simple/spectrafp/), version: 1.1.0 2023-10-19T20:26:22,442 Fetching project page and analyzing links: https://www.piwheels.org/simple/spectrafp/ 2023-10-19T20:26:22,443 Getting page https://www.piwheels.org/simple/spectrafp/ 2023-10-19T20:26:22,444 Found index url https://www.piwheels.org/simple/ 2023-10-19T20:26:22,617 Fetched page https://www.piwheels.org/simple/spectrafp/ as text/html 2023-10-19T20:26:22,619 Skipping link: No binaries permitted for spectrafp: https://www.piwheels.org/simple/spectrafp/SpectraFP-1.0.2-py3-none-any.whl#sha256=467975fa015f1e48be4e752d7bbcc6bda595df31695c4b8b93ecf2b85b616ef6 (from https://www.piwheels.org/simple/spectrafp/) 2023-10-19T20:26:22,619 Skipping link: not a file: https://www.piwheels.org/simple/spectrafp/ 2023-10-19T20:26:22,620 Skipping link: not a file: https://pypi.org/simple/spectrafp/ 2023-10-19T20:26:22,639 Given no hashes to check 1 links for project 'spectrafp': discarding no candidates 2023-10-19T20:26:22,657 Collecting spectrafp==1.1.0 2023-10-19T20:26:22,660 Created temporary directory: /tmp/pip-unpack-8hr3cqca 2023-10-19T20:26:22,886 Downloading SpectraFP-1.1.0.tar.gz (5.8 MB) 2023-10-19T20:26:24,241 Added spectrafp==1.1.0 from https://files.pythonhosted.org/packages/23/8b/09079285c09c6cf57ed72fb3ca968b74a4e849ea18537a07a29dbc736ba7/SpectraFP-1.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-thvnbado' 2023-10-19T20:26:24,244 Running setup.py (path:/tmp/pip-wheel-f1_038q8/spectrafp_d8359ea6b61441e2b6e0a673b49e72dc/setup.py) egg_info for package spectrafp 2023-10-19T20:26:24,244 Created temporary directory: /tmp/pip-pip-egg-info-v20d2feb 2023-10-19T20:26:24,245 Preparing metadata (setup.py): started 2023-10-19T20:26:24,246 Running command python setup.py egg_info 2023-10-19T20:26:24,733 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-10-19T20:26:24,733 !! 2023-10-19T20:26:24,734 ******************************************************************************** 2023-10-19T20:26:24,735 Usage of dash-separated 'description-file' will not be supported in future 2023-10-19T20:26:24,735 versions. Please use the underscore name 'description_file' instead. 2023-10-19T20:26:24,736 This deprecation is overdue, please update your project and remove deprecated 2023-10-19T20:26:24,737 calls to avoid build errors in the future. 2023-10-19T20:26:24,738 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-10-19T20:26:24,738 ******************************************************************************** 2023-10-19T20:26:24,739 !! 2023-10-19T20:26:24,740 opt = self.warn_dash_deprecation(opt, section) 2023-10-19T20:26:25,283 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-10-19T20:26:25,284 !! 2023-10-19T20:26:25,285 ******************************************************************************** 2023-10-19T20:26:25,286 Usage of dash-separated 'description-file' will not be supported in future 2023-10-19T20:26:25,286 versions. Please use the underscore name 'description_file' instead. 2023-10-19T20:26:25,287 This deprecation is overdue, please update your project and remove deprecated 2023-10-19T20:26:25,288 calls to avoid build errors in the future. 2023-10-19T20:26:25,289 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-10-19T20:26:25,290 ******************************************************************************** 2023-10-19T20:26:25,291 !! 2023-10-19T20:26:25,292 opt = self.warn_dash_deprecation(opt, section) 2023-10-19T20:26:25,322 running egg_info 2023-10-19T20:26:25,324 creating /tmp/pip-pip-egg-info-v20d2feb/SpectraFP.egg-info 2023-10-19T20:26:25,349 writing /tmp/pip-pip-egg-info-v20d2feb/SpectraFP.egg-info/PKG-INFO 2023-10-19T20:26:25,352 writing dependency_links to /tmp/pip-pip-egg-info-v20d2feb/SpectraFP.egg-info/dependency_links.txt 2023-10-19T20:26:25,354 writing requirements to /tmp/pip-pip-egg-info-v20d2feb/SpectraFP.egg-info/requires.txt 2023-10-19T20:26:25,355 writing top-level names to /tmp/pip-pip-egg-info-v20d2feb/SpectraFP.egg-info/top_level.txt 2023-10-19T20:26:25,356 writing manifest file '/tmp/pip-pip-egg-info-v20d2feb/SpectraFP.egg-info/SOURCES.txt' 2023-10-19T20:26:25,433 reading manifest file '/tmp/pip-pip-egg-info-v20d2feb/SpectraFP.egg-info/SOURCES.txt' 2023-10-19T20:26:25,434 reading manifest template 'MANIFEST.in' 2023-10-19T20:26:25,436 adding license file 'LICENSE' 2023-10-19T20:26:25,438 writing manifest file '/tmp/pip-pip-egg-info-v20d2feb/SpectraFP.egg-info/SOURCES.txt' 2023-10-19T20:26:25,548 Preparing metadata (setup.py): finished with status 'done' 2023-10-19T20:26:25,552 Source in /tmp/pip-wheel-f1_038q8/spectrafp_d8359ea6b61441e2b6e0a673b49e72dc has version 1.1.0, which satisfies requirement spectrafp==1.1.0 from https://files.pythonhosted.org/packages/23/8b/09079285c09c6cf57ed72fb3ca968b74a4e849ea18537a07a29dbc736ba7/SpectraFP-1.1.0.tar.gz 2023-10-19T20:26:25,553 Removed spectrafp==1.1.0 from https://files.pythonhosted.org/packages/23/8b/09079285c09c6cf57ed72fb3ca968b74a4e849ea18537a07a29dbc736ba7/SpectraFP-1.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-thvnbado' 2023-10-19T20:26:25,558 Created temporary directory: /tmp/pip-unpack-zfhxearf 2023-10-19T20:26:25,559 Created temporary directory: /tmp/pip-unpack-tr6bg9fp 2023-10-19T20:26:25,566 Building wheels for collected packages: spectrafp 2023-10-19T20:26:25,570 Created temporary directory: /tmp/pip-wheel-uoi1u1z5 2023-10-19T20:26:25,571 Building wheel for spectrafp (setup.py): started 2023-10-19T20:26:25,572 Destination directory: /tmp/pip-wheel-uoi1u1z5 2023-10-19T20:26:25,573 Running command python setup.py bdist_wheel 2023-10-19T20:26:26,017 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-10-19T20:26:26,018 !! 2023-10-19T20:26:26,019 ******************************************************************************** 2023-10-19T20:26:26,019 Usage of dash-separated 'description-file' will not be supported in future 2023-10-19T20:26:26,020 versions. Please use the underscore name 'description_file' instead. 2023-10-19T20:26:26,021 This deprecation is overdue, please update your project and remove deprecated 2023-10-19T20:26:26,021 calls to avoid build errors in the future. 2023-10-19T20:26:26,022 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-10-19T20:26:26,023 ******************************************************************************** 2023-10-19T20:26:26,024 !! 2023-10-19T20:26:26,024 opt = self.warn_dash_deprecation(opt, section) 2023-10-19T20:26:26,548 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:498: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-10-19T20:26:26,548 !! 2023-10-19T20:26:26,549 ******************************************************************************** 2023-10-19T20:26:26,550 Usage of dash-separated 'description-file' will not be supported in future 2023-10-19T20:26:26,550 versions. Please use the underscore name 'description_file' instead. 2023-10-19T20:26:26,551 This deprecation is overdue, please update your project and remove deprecated 2023-10-19T20:26:26,552 calls to avoid build errors in the future. 2023-10-19T20:26:26,553 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-10-19T20:26:26,554 ******************************************************************************** 2023-10-19T20:26:26,554 !! 2023-10-19T20:26:26,555 opt = self.warn_dash_deprecation(opt, section) 2023-10-19T20:26:26,579 running bdist_wheel 2023-10-19T20:26:26,674 running build 2023-10-19T20:26:26,674 running build_py 2023-10-19T20:26:26,701 creating build 2023-10-19T20:26:26,701 creating build/lib 2023-10-19T20:26:26,702 creating build/lib/SpectraFP 2023-10-19T20:26:26,703 copying SpectraFP/fastsimilarity.py -> build/lib/SpectraFP 2023-10-19T20:26:26,706 copying SpectraFP/spectrafp.py -> build/lib/SpectraFP 2023-10-19T20:26:26,709 copying SpectraFP/__init__.py -> build/lib/SpectraFP 2023-10-19T20:26:26,710 copying SpectraFP/__main__.py -> build/lib/SpectraFP 2023-10-19T20:26:26,712 running egg_info 2023-10-19T20:26:26,767 writing SpectraFP.egg-info/PKG-INFO 2023-10-19T20:26:26,770 writing dependency_links to SpectraFP.egg-info/dependency_links.txt 2023-10-19T20:26:26,772 writing requirements to SpectraFP.egg-info/requires.txt 2023-10-19T20:26:26,773 writing top-level names to SpectraFP.egg-info/top_level.txt 2023-10-19T20:26:26,799 reading manifest file 'SpectraFP.egg-info/SOURCES.txt' 2023-10-19T20:26:26,802 reading manifest template 'MANIFEST.in' 2023-10-19T20:26:26,803 adding license file 'LICENSE' 2023-10-19T20:26:26,805 writing manifest file 'SpectraFP.egg-info/SOURCES.txt' 2023-10-19T20:26:26,807 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'SpectraFP.data' is absent from the `packages` configuration. 2023-10-19T20:26:26,807 !! 2023-10-19T20:26:26,808 ******************************************************************************** 2023-10-19T20:26:26,809 ############################ 2023-10-19T20:26:26,809 # Package would be ignored # 2023-10-19T20:26:26,809 ############################ 2023-10-19T20:26:26,810 Python recognizes 'SpectraFP.data' as an importable package[^1], 2023-10-19T20:26:26,810 but it is absent from setuptools' `packages` configuration. 2023-10-19T20:26:26,811 This leads to an ambiguous overall configuration. If you want to distribute this 2023-10-19T20:26:26,812 package, please make sure that 'SpectraFP.data' is explicitly added 2023-10-19T20:26:26,812 to the `packages` configuration field. 2023-10-19T20:26:26,813 Alternatively, you can also rely on setuptools' discovery methods 2023-10-19T20:26:26,814 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-10-19T20:26:26,814 instead of `find_packages(...)`/`find:`). 2023-10-19T20:26:26,815 You can read more about "package discovery" on setuptools documentation page: 2023-10-19T20:26:26,816 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-10-19T20:26:26,817 If you don't want 'SpectraFP.data' to be distributed and are 2023-10-19T20:26:26,817 already explicitly excluding 'SpectraFP.data' via 2023-10-19T20:26:26,818 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-10-19T20:26:26,818 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-10-19T20:26:26,820 combination with a more fine grained `package-data` configuration. 2023-10-19T20:26:26,824 You can read more about "package data files" on setuptools documentation page: 2023-10-19T20:26:26,825 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-10-19T20:26:26,834 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-10-19T20:26:26,838 even if it does not contain any `.py` files. 2023-10-19T20:26:26,839 On the other hand, currently there is no concept of package data 2023-10-19T20:26:26,839 directory, all directories are treated like packages. 2023-10-19T20:26:26,840 ******************************************************************************** 2023-10-19T20:26:26,841 !! 2023-10-19T20:26:26,841 check.warn(importable) 2023-10-19T20:26:26,842 creating build/lib/SpectraFP/data 2023-10-19T20:26:26,843 copying SpectraFP/data/df_l0.pkl -> build/lib/SpectraFP/data 2023-10-19T20:26:26,843 copying SpectraFP/data/df_l1.pkl -> build/lib/SpectraFP/data 2023-10-19T20:26:26,863 copying SpectraFP/data/df_l2.pkl -> build/lib/SpectraFP/data 2023-10-19T20:26:26,882 copying SpectraFP/data/df_l3.pkl -> build/lib/SpectraFP/data 2023-10-19T20:26:26,902 copying SpectraFP/data/df_l4.pkl -> build/lib/SpectraFP/data 2023-10-19T20:26:26,918 copying SpectraFP/data/multiplicities.csv -> build/lib/SpectraFP/data 2023-10-19T20:26:26,944 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-10-19T20:26:26,945 !! 2023-10-19T20:26:26,946 ******************************************************************************** 2023-10-19T20:26:26,947 Please avoid running ``setup.py`` directly. 2023-10-19T20:26:26,948 Instead, use pypa/build, pypa/installer or other 2023-10-19T20:26:26,949 standards-based tools. 2023-10-19T20:26:26,950 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-10-19T20:26:26,950 ******************************************************************************** 2023-10-19T20:26:26,951 !! 2023-10-19T20:26:26,952 self.initialize_options() 2023-10-19T20:26:26,974 installing to build/bdist.linux-armv7l/wheel 2023-10-19T20:26:26,974 running install 2023-10-19T20:26:26,999 running install_lib 2023-10-19T20:26:27,024 creating build/bdist.linux-armv7l 2023-10-19T20:26:27,025 creating build/bdist.linux-armv7l/wheel 2023-10-19T20:26:27,027 creating build/bdist.linux-armv7l/wheel/SpectraFP 2023-10-19T20:26:27,028 copying build/lib/SpectraFP/fastsimilarity.py -> build/bdist.linux-armv7l/wheel/SpectraFP 2023-10-19T20:26:27,031 copying build/lib/SpectraFP/spectrafp.py -> build/bdist.linux-armv7l/wheel/SpectraFP 2023-10-19T20:26:27,034 creating build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-10-19T20:26:27,035 copying build/lib/SpectraFP/data/df_l0.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-10-19T20:26:27,065 copying build/lib/SpectraFP/data/df_l2.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-10-19T20:26:27,084 copying build/lib/SpectraFP/data/df_l1.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-10-19T20:26:27,113 copying build/lib/SpectraFP/data/df_l4.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-10-19T20:26:27,131 copying build/lib/SpectraFP/data/multiplicities.csv -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-10-19T20:26:27,133 copying build/lib/SpectraFP/data/df_l3.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-10-19T20:26:27,158 copying build/lib/SpectraFP/__init__.py -> build/bdist.linux-armv7l/wheel/SpectraFP 2023-10-19T20:26:27,160 copying build/lib/SpectraFP/__main__.py -> build/bdist.linux-armv7l/wheel/SpectraFP 2023-10-19T20:26:27,162 running install_egg_info 2023-10-19T20:26:27,193 Copying SpectraFP.egg-info to build/bdist.linux-armv7l/wheel/SpectraFP-1.1.0-py3.11.egg-info 2023-10-19T20:26:27,203 running install_scripts 2023-10-19T20:26:27,219 creating build/bdist.linux-armv7l/wheel/SpectraFP-1.1.0.dist-info/WHEEL 2023-10-19T20:26:27,221 creating '/tmp/pip-wheel-uoi1u1z5/SpectraFP-1.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-19T20:26:27,224 adding 'SpectraFP/__init__.py' 2023-10-19T20:26:27,226 adding 'SpectraFP/__main__.py' 2023-10-19T20:26:27,227 adding 'SpectraFP/fastsimilarity.py' 2023-10-19T20:26:27,231 adding 'SpectraFP/spectrafp.py' 2023-10-19T20:26:27,523 adding 'SpectraFP/data/df_l0.pkl' 2023-10-19T20:26:27,711 adding 'SpectraFP/data/df_l1.pkl' 2023-10-19T20:26:27,866 adding 'SpectraFP/data/df_l2.pkl' 2023-10-19T20:26:28,005 adding 'SpectraFP/data/df_l3.pkl' 2023-10-19T20:26:28,135 adding 'SpectraFP/data/df_l4.pkl' 2023-10-19T20:26:28,144 adding 'SpectraFP/data/multiplicities.csv' 2023-10-19T20:26:28,152 adding 'SpectraFP-1.1.0.dist-info/LICENSE' 2023-10-19T20:26:28,154 adding 'SpectraFP-1.1.0.dist-info/METADATA' 2023-10-19T20:26:28,155 adding 'SpectraFP-1.1.0.dist-info/WHEEL' 2023-10-19T20:26:28,156 adding 'SpectraFP-1.1.0.dist-info/top_level.txt' 2023-10-19T20:26:28,161 adding 'SpectraFP-1.1.0.dist-info/RECORD' 2023-10-19T20:26:28,225 removing build/bdist.linux-armv7l/wheel 2023-10-19T20:26:28,345 Building wheel for spectrafp (setup.py): finished with status 'done' 2023-10-19T20:26:28,419 Created wheel for spectrafp: filename=SpectraFP-1.1.0-py3-none-any.whl size=5764619 sha256=449a7e536fa5900dc9633a78fc3763e7cef23363aa996dba1582b2af1f1e1d14 2023-10-19T20:26:28,420 Stored in directory: /tmp/pip-ephem-wheel-cache-v87s_jax/wheels/a0/3d/2f/6224557c636a1266929306e889bcd72314628669f937b47fff 2023-10-19T20:26:28,433 Successfully built spectrafp 2023-10-19T20:26:28,574 Removed build tracker: '/tmp/pip-build-tracker-thvnbado'