2023-10-25T19:59:17,159 Created temporary directory: /tmp/pip-build-tracker-acqiz98f 2023-10-25T19:59:17,160 Initialized build tracking at /tmp/pip-build-tracker-acqiz98f 2023-10-25T19:59:17,160 Created build tracker: /tmp/pip-build-tracker-acqiz98f 2023-10-25T19:59:17,161 Entered build tracker: /tmp/pip-build-tracker-acqiz98f 2023-10-25T19:59:17,162 Created temporary directory: /tmp/pip-wheel-npd_g79a 2023-10-25T19:59:17,165 Created temporary directory: /tmp/pip-ephem-wheel-cache-nfrxdnct 2023-10-25T19:59:17,187 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-10-25T19:59:17,190 2 location(s) to search for versions of tides-ml: 2023-10-25T19:59:17,190 * https://pypi.org/simple/tides-ml/ 2023-10-25T19:59:17,190 * https://www.piwheels.org/simple/tides-ml/ 2023-10-25T19:59:17,191 Fetching project page and analyzing links: https://pypi.org/simple/tides-ml/ 2023-10-25T19:59:17,192 Getting page https://pypi.org/simple/tides-ml/ 2023-10-25T19:59:17,193 Found index url https://pypi.org/simple/ 2023-10-25T19:59:17,412 Fetched page https://pypi.org/simple/tides-ml/ as application/vnd.pypi.simple.v1+json 2023-10-25T19:59:17,414 Found link https://files.pythonhosted.org/packages/5f/36/546fae559d74d7dea6662566758707c0c4fdc5472e8a833813aa24ae39ba/TIdeS-ML-1.0.0.tar.gz (from https://pypi.org/simple/tides-ml/) (requires-python:>=3.8), version: 1.0.0 2023-10-25T19:59:17,415 Found link https://files.pythonhosted.org/packages/fd/e2/ef42b4e54a85fb97c9ecfff090fe5fa3b796feec59066ba1fa3b758c0c02/TIdeS-ML-1.0.1.tar.gz (from https://pypi.org/simple/tides-ml/) (requires-python:>=3.8), version: 1.0.1 2023-10-25T19:59:17,416 Found link https://files.pythonhosted.org/packages/30/d6/ebccee35601bfd2e2959a4bfa7882613eb8bf4f8a33c768fa9bb5c1536c0/TIdeS-ML-1.0.4.tar.gz (from https://pypi.org/simple/tides-ml/) (requires-python:>=3.8), version: 1.0.4 2023-10-25T19:59:17,417 Found link https://files.pythonhosted.org/packages/44/07/5f618127dce352efb0df7bd3eb06a52c89571cdaa2b2422ab4227abadd69/TIdeS-ML-1.1.0.tar.gz (from https://pypi.org/simple/tides-ml/) (requires-python:>=3.8), version: 1.1.0 2023-10-25T19:59:17,418 Found link https://files.pythonhosted.org/packages/26/21/d2d3abae9d0333ef9a312c4160b712bf871963164903234c2d5aca37a6b8/TIdeS-ML-1.1.1.tar.gz (from https://pypi.org/simple/tides-ml/) (requires-python:>=3.8), version: 1.1.1 2023-10-25T19:59:17,419 Fetching project page and analyzing links: https://www.piwheels.org/simple/tides-ml/ 2023-10-25T19:59:17,420 Getting page https://www.piwheels.org/simple/tides-ml/ 2023-10-25T19:59:17,421 Found index url https://www.piwheels.org/simple/ 2023-10-25T19:59:17,588 Fetched page https://www.piwheels.org/simple/tides-ml/ as text/html 2023-10-25T19:59:17,590 Skipping link: No binaries permitted for tides-ml: https://www.piwheels.org/simple/tides-ml/TIdeS_ML-1.0.4-py3-none-any.whl#sha256=339f9bbffbb45aa06c6a24e7e7806f415e9556b9502eb5b5531ccb67b036deef (from https://www.piwheels.org/simple/tides-ml/) (requires-python:>=3.8) 2023-10-25T19:59:17,591 Skipping link: No binaries permitted for tides-ml: https://www.piwheels.org/simple/tides-ml/TIdeS_ML-1.0.1-py3-none-any.whl#sha256=ae4f2e68764f7b4dd415b9c8f7a874bc11ac83903ecb40d3182d6e0f6e85216c (from https://www.piwheels.org/simple/tides-ml/) (requires-python:>=3.8) 2023-10-25T19:59:17,591 Skipping link: No binaries permitted for tides-ml: https://www.piwheels.org/simple/tides-ml/TIdeS_ML-1.0.0-py3-none-any.whl#sha256=a797fda6cba81937be103210baeb4801cc668eef08712fd68d35749a50dadc3b (from https://www.piwheels.org/simple/tides-ml/) (requires-python:>=3.8) 2023-10-25T19:59:17,592 Skipping link: not a file: https://www.piwheels.org/simple/tides-ml/ 2023-10-25T19:59:17,593 Skipping link: not a file: https://pypi.org/simple/tides-ml/ 2023-10-25T19:59:17,614 Given no hashes to check 1 links for project 'tides-ml': discarding no candidates 2023-10-25T19:59:17,633 Collecting tides-ml==1.1.0 2023-10-25T19:59:17,636 Created temporary directory: /tmp/pip-unpack-nzq0zbv2 2023-10-25T19:59:17,852 Downloading TIdeS-ML-1.1.0.tar.gz (22 kB) 2023-10-25T19:59:17,906 Added tides-ml==1.1.0 from https://files.pythonhosted.org/packages/44/07/5f618127dce352efb0df7bd3eb06a52c89571cdaa2b2422ab4227abadd69/TIdeS-ML-1.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-acqiz98f' 2023-10-25T19:59:17,908 Running setup.py (path:/tmp/pip-wheel-npd_g79a/tides-ml_c62f11189d2f45fb8da42b4f14e9743f/setup.py) egg_info for package tides-ml 2023-10-25T19:59:17,909 Created temporary directory: /tmp/pip-pip-egg-info-rlv3_s6z 2023-10-25T19:59:17,909 Preparing metadata (setup.py): started 2023-10-25T19:59:17,910 Running command python setup.py egg_info 2023-10-25T19:59:18,948 running egg_info 2023-10-25T19:59:18,949 creating /tmp/pip-pip-egg-info-rlv3_s6z/TIdeS_ML.egg-info 2023-10-25T19:59:18,975 writing /tmp/pip-pip-egg-info-rlv3_s6z/TIdeS_ML.egg-info/PKG-INFO 2023-10-25T19:59:18,982 writing dependency_links to /tmp/pip-pip-egg-info-rlv3_s6z/TIdeS_ML.egg-info/dependency_links.txt 2023-10-25T19:59:18,983 writing entry points to /tmp/pip-pip-egg-info-rlv3_s6z/TIdeS_ML.egg-info/entry_points.txt 2023-10-25T19:59:18,985 writing requirements to /tmp/pip-pip-egg-info-rlv3_s6z/TIdeS_ML.egg-info/requires.txt 2023-10-25T19:59:18,986 writing top-level names to /tmp/pip-pip-egg-info-rlv3_s6z/TIdeS_ML.egg-info/top_level.txt 2023-10-25T19:59:18,987 writing manifest file '/tmp/pip-pip-egg-info-rlv3_s6z/TIdeS_ML.egg-info/SOURCES.txt' 2023-10-25T19:59:19,067 reading manifest file '/tmp/pip-pip-egg-info-rlv3_s6z/TIdeS_ML.egg-info/SOURCES.txt' 2023-10-25T19:59:19,069 adding license file 'LICENSE' 2023-10-25T19:59:19,071 writing manifest file '/tmp/pip-pip-egg-info-rlv3_s6z/TIdeS_ML.egg-info/SOURCES.txt' 2023-10-25T19:59:19,182 Preparing metadata (setup.py): finished with status 'done' 2023-10-25T19:59:19,187 Source in /tmp/pip-wheel-npd_g79a/tides-ml_c62f11189d2f45fb8da42b4f14e9743f has version 1.1.0, which satisfies requirement tides-ml==1.1.0 from https://files.pythonhosted.org/packages/44/07/5f618127dce352efb0df7bd3eb06a52c89571cdaa2b2422ab4227abadd69/TIdeS-ML-1.1.0.tar.gz 2023-10-25T19:59:19,188 Removed tides-ml==1.1.0 from https://files.pythonhosted.org/packages/44/07/5f618127dce352efb0df7bd3eb06a52c89571cdaa2b2422ab4227abadd69/TIdeS-ML-1.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-acqiz98f' 2023-10-25T19:59:19,194 Created temporary directory: /tmp/pip-unpack-g6_j9ogg 2023-10-25T19:59:19,195 Created temporary directory: /tmp/pip-unpack-_iip3ta7 2023-10-25T19:59:19,205 Building wheels for collected packages: tides-ml 2023-10-25T19:59:19,209 Created temporary directory: /tmp/pip-wheel-2kw9psrg 2023-10-25T19:59:19,209 Building wheel for tides-ml (setup.py): started 2023-10-25T19:59:19,211 Destination directory: /tmp/pip-wheel-2kw9psrg 2023-10-25T19:59:19,211 Running command python setup.py bdist_wheel 2023-10-25T19:59:20,219 running bdist_wheel 2023-10-25T19:59:20,350 running build 2023-10-25T19:59:20,351 running build_py 2023-10-25T19:59:20,378 creating build 2023-10-25T19:59:20,379 creating build/lib 2023-10-25T19:59:20,380 creating build/lib/tides 2023-10-25T19:59:20,381 copying tides/tides.py -> build/lib/tides 2023-10-25T19:59:20,384 copying tides/__init__.py -> build/lib/tides 2023-10-25T19:59:20,386 creating build/lib/tides/bin 2023-10-25T19:59:20,387 copying tides/bin/save_preds.py -> build/lib/tides/bin 2023-10-25T19:59:20,389 copying tides/bin/orf_composition.py -> build/lib/tides/bin 2023-10-25T19:59:20,390 copying tides/bin/__init__.py -> build/lib/tides/bin 2023-10-25T19:59:20,392 copying tides/bin/classify_orfs.py -> build/lib/tides/bin 2023-10-25T19:59:20,394 copying tides/bin/orf_call.py -> build/lib/tides/bin 2023-10-25T19:59:20,397 copying tides/bin/filt_seqs.py -> build/lib/tides/bin 2023-10-25T19:59:20,399 copying tides/bin/orf_prep.py -> build/lib/tides/bin 2023-10-25T19:59:20,431 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-10-25T19:59:20,431 !! 2023-10-25T19:59:20,433 ******************************************************************************** 2023-10-25T19:59:20,433 Please avoid running ``setup.py`` directly. 2023-10-25T19:59:20,434 Instead, use pypa/build, pypa/installer or other 2023-10-25T19:59:20,434 standards-based tools. 2023-10-25T19:59:20,435 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-10-25T19:59:20,436 ******************************************************************************** 2023-10-25T19:59:20,437 !! 2023-10-25T19:59:20,437 self.initialize_options() 2023-10-25T19:59:20,458 installing to build/bdist.linux-armv7l/wheel 2023-10-25T19:59:20,459 running install 2023-10-25T19:59:20,483 running install_lib 2023-10-25T19:59:20,508 creating build/bdist.linux-armv7l 2023-10-25T19:59:20,509 creating build/bdist.linux-armv7l/wheel 2023-10-25T19:59:20,510 creating build/bdist.linux-armv7l/wheel/tides 2023-10-25T19:59:20,511 copying build/lib/tides/tides.py -> build/bdist.linux-armv7l/wheel/tides 2023-10-25T19:59:20,514 creating build/bdist.linux-armv7l/wheel/tides/bin 2023-10-25T19:59:20,515 copying build/lib/tides/bin/save_preds.py -> build/bdist.linux-armv7l/wheel/tides/bin 2023-10-25T19:59:20,517 copying build/lib/tides/bin/orf_composition.py -> build/bdist.linux-armv7l/wheel/tides/bin 2023-10-25T19:59:20,519 copying build/lib/tides/bin/__init__.py -> build/bdist.linux-armv7l/wheel/tides/bin 2023-10-25T19:59:20,520 copying build/lib/tides/bin/classify_orfs.py -> build/bdist.linux-armv7l/wheel/tides/bin 2023-10-25T19:59:20,523 copying build/lib/tides/bin/orf_call.py -> build/bdist.linux-armv7l/wheel/tides/bin 2023-10-25T19:59:20,525 copying build/lib/tides/bin/filt_seqs.py -> build/bdist.linux-armv7l/wheel/tides/bin 2023-10-25T19:59:20,527 copying build/lib/tides/bin/orf_prep.py -> build/bdist.linux-armv7l/wheel/tides/bin 2023-10-25T19:59:20,529 copying build/lib/tides/__init__.py -> build/bdist.linux-armv7l/wheel/tides 2023-10-25T19:59:20,531 running install_egg_info 2023-10-25T19:59:20,562 running egg_info 2023-10-25T19:59:20,587 writing TIdeS_ML.egg-info/PKG-INFO 2023-10-25T19:59:20,591 writing dependency_links to TIdeS_ML.egg-info/dependency_links.txt 2023-10-25T19:59:20,592 writing entry points to TIdeS_ML.egg-info/entry_points.txt 2023-10-25T19:59:20,593 writing requirements to TIdeS_ML.egg-info/requires.txt 2023-10-25T19:59:20,594 writing top-level names to TIdeS_ML.egg-info/top_level.txt 2023-10-25T19:59:20,622 reading manifest file 'TIdeS_ML.egg-info/SOURCES.txt' 2023-10-25T19:59:20,624 adding license file 'LICENSE' 2023-10-25T19:59:20,626 writing manifest file 'TIdeS_ML.egg-info/SOURCES.txt' 2023-10-25T19:59:20,628 Copying TIdeS_ML.egg-info to build/bdist.linux-armv7l/wheel/TIdeS_ML-1.1.0-py3.11.egg-info 2023-10-25T19:59:20,638 running install_scripts 2023-10-25T19:59:20,654 creating build/bdist.linux-armv7l/wheel/TIdeS_ML-1.1.0.dist-info/WHEEL 2023-10-25T19:59:20,656 creating '/tmp/pip-wheel-2kw9psrg/TIdeS_ML-1.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-10-25T19:59:20,659 adding 'tides/__init__.py' 2023-10-25T19:59:20,662 adding 'tides/tides.py' 2023-10-25T19:59:20,664 adding 'tides/bin/__init__.py' 2023-10-25T19:59:20,665 adding 'tides/bin/classify_orfs.py' 2023-10-25T19:59:20,668 adding 'tides/bin/filt_seqs.py' 2023-10-25T19:59:20,671 adding 'tides/bin/orf_call.py' 2023-10-25T19:59:20,672 adding 'tides/bin/orf_composition.py' 2023-10-25T19:59:20,674 adding 'tides/bin/orf_prep.py' 2023-10-25T19:59:20,675 adding 'tides/bin/save_preds.py' 2023-10-25T19:59:20,676 adding 'TIdeS_ML-1.1.0.dist-info/LICENSE' 2023-10-25T19:59:20,678 adding 'TIdeS_ML-1.1.0.dist-info/METADATA' 2023-10-25T19:59:20,679 adding 'TIdeS_ML-1.1.0.dist-info/WHEEL' 2023-10-25T19:59:20,680 adding 'TIdeS_ML-1.1.0.dist-info/entry_points.txt' 2023-10-25T19:59:20,681 adding 'TIdeS_ML-1.1.0.dist-info/top_level.txt' 2023-10-25T19:59:20,682 adding 'TIdeS_ML-1.1.0.dist-info/RECORD' 2023-10-25T19:59:20,683 removing build/bdist.linux-armv7l/wheel 2023-10-25T19:59:20,802 Building wheel for tides-ml (setup.py): finished with status 'done' 2023-10-25T19:59:20,805 Created wheel for tides-ml: filename=TIdeS_ML-1.1.0-py3-none-any.whl size=26261 sha256=0367146f3b2b5a33dc6f312d7b3c673997175b203a06efd045a8ea3e24389555 2023-10-25T19:59:20,806 Stored in directory: /tmp/pip-ephem-wheel-cache-nfrxdnct/wheels/d5/fa/70/b943145c0c2a716cd4714038d083ac650b25743109b468aff5 2023-10-25T19:59:20,817 Successfully built tides-ml 2023-10-25T19:59:20,821 Removed build tracker: '/tmp/pip-build-tracker-acqiz98f'