2023-11-27T20:35:49,497 Created temporary directory: /tmp/pip-build-tracker-wl93af2t 2023-11-27T20:35:49,499 Initialized build tracking at /tmp/pip-build-tracker-wl93af2t 2023-11-27T20:35:49,499 Created build tracker: /tmp/pip-build-tracker-wl93af2t 2023-11-27T20:35:49,499 Entered build tracker: /tmp/pip-build-tracker-wl93af2t 2023-11-27T20:35:49,500 Created temporary directory: /tmp/pip-wheel-a5e2yxpq 2023-11-27T20:35:49,503 Created temporary directory: /tmp/pip-ephem-wheel-cache-9n1249g7 2023-11-27T20:35:49,525 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2023-11-27T20:35:49,528 2 location(s) to search for versions of spectrafp: 2023-11-27T20:35:49,528 * https://pypi.org/simple/spectrafp/ 2023-11-27T20:35:49,528 * https://www.piwheels.org/simple/spectrafp/ 2023-11-27T20:35:49,529 Fetching project page and analyzing links: https://pypi.org/simple/spectrafp/ 2023-11-27T20:35:49,530 Getting page https://pypi.org/simple/spectrafp/ 2023-11-27T20:35:49,531 Found index url https://pypi.org/simple/ 2023-11-27T20:35:49,742 Fetched page https://pypi.org/simple/spectrafp/ as application/vnd.pypi.simple.v1+json 2023-11-27T20:35:49,745 Skipping link: No binaries permitted for spectrafp: https://files.pythonhosted.org/packages/3c/58/65581951ef13e045fa604b555d45a67796d79766cbd5b8ea160a06f6d9cd/SpectraFP-1.0.0-py3-none-any.whl (from https://pypi.org/simple/spectrafp/) 2023-11-27T20:35:49,746 Found link https://files.pythonhosted.org/packages/7a/4f/debfa233444c7e1b16cdc61a4ae4e3e49140ebcdbce4c9d631e16c6a08b4/SpectraFP-1.0.0.linux-x86_64.tar.gz (from https://pypi.org/simple/spectrafp/), version: 1.0.0.linux-x86_64 2023-11-27T20:35:49,746 Skipping link: No binaries permitted for spectrafp: https://files.pythonhosted.org/packages/43/33/9094a53e4b6fb1a2d98371e31262168fd2b870543d688800b7e25be3ac04/SpectraFP-1.0.1-py3-none-any.whl (from https://pypi.org/simple/spectrafp/) 2023-11-27T20:35:49,747 Found link https://files.pythonhosted.org/packages/57/4f/417aaeb44e80d2fe15af5c4b881369979dbd0b194104233940620d502ed2/SpectraFP-1.0.1.linux-x86_64.tar.gz (from https://pypi.org/simple/spectrafp/), version: 1.0.1.linux-x86_64 2023-11-27T20:35:49,748 Skipping link: No binaries permitted for spectrafp: https://files.pythonhosted.org/packages/ca/fd/3d8a83bb087f986b9516e063ab5196e4017e57052ef051f5804355743ec9/SpectraFP-1.0.2-py3-none-any.whl (from https://pypi.org/simple/spectrafp/) 2023-11-27T20:35:49,749 Found link https://files.pythonhosted.org/packages/b1/bb/da895bfdeeaed8caac2da4fbc8a1bba5e53a2f53bf6fe7a3206ae697f2b0/SpectraFP-1.0.2.tar.gz (from https://pypi.org/simple/spectrafp/), version: 1.0.2 2023-11-27T20:35:49,749 Skipping link: No binaries permitted for spectrafp: https://files.pythonhosted.org/packages/d4/3a/c3d92b95724c6297d56a7c81060066940c2b293084fbabb53edf34db7caf/SpectraFP-1.1.0-py3-none-any.whl (from https://pypi.org/simple/spectrafp/) 2023-11-27T20:35:49,750 Found link https://files.pythonhosted.org/packages/23/8b/09079285c09c6cf57ed72fb3ca968b74a4e849ea18537a07a29dbc736ba7/SpectraFP-1.1.0.tar.gz (from https://pypi.org/simple/spectrafp/), version: 1.1.0 2023-11-27T20:35:49,751 Skipping link: No binaries permitted for spectrafp: https://files.pythonhosted.org/packages/b6/63/6df99c9562b952011992ba532f44a3e937b780a4dd1781f0e41cc7047c33/SpectraFP-1.1.1-py3-none-any.whl (from https://pypi.org/simple/spectrafp/) 2023-11-27T20:35:49,752 Found link https://files.pythonhosted.org/packages/db/10/bde199c86f8dd8e06ad3586b00976f14366169ee94acafaba9825adcd775/SpectraFP-1.1.1.tar.gz (from https://pypi.org/simple/spectrafp/), version: 1.1.1 2023-11-27T20:35:49,752 Fetching project page and analyzing links: https://www.piwheels.org/simple/spectrafp/ 2023-11-27T20:35:49,753 Getting page https://www.piwheels.org/simple/spectrafp/ 2023-11-27T20:35:49,754 Found index url https://www.piwheels.org/simple/ 2023-11-27T20:35:49,915 Fetched page https://www.piwheels.org/simple/spectrafp/ as text/html 2023-11-27T20:35:49,917 Skipping link: No binaries permitted for spectrafp: https://www.piwheels.org/simple/spectrafp/SpectraFP-1.1.0-py3-none-any.whl#sha256=449a7e536fa5900dc9633a78fc3763e7cef23363aa996dba1582b2af1f1e1d14 (from https://www.piwheels.org/simple/spectrafp/) 2023-11-27T20:35:49,917 Skipping link: No binaries permitted for spectrafp: https://www.piwheels.org/simple/spectrafp/SpectraFP-1.0.2-py3-none-any.whl#sha256=467975fa015f1e48be4e752d7bbcc6bda595df31695c4b8b93ecf2b85b616ef6 (from https://www.piwheels.org/simple/spectrafp/) 2023-11-27T20:35:49,918 Skipping link: not a file: https://www.piwheels.org/simple/spectrafp/ 2023-11-27T20:35:49,919 Skipping link: not a file: https://pypi.org/simple/spectrafp/ 2023-11-27T20:35:49,937 Given no hashes to check 1 links for project 'spectrafp': discarding no candidates 2023-11-27T20:35:49,955 Collecting spectrafp==1.1.1 2023-11-27T20:35:49,957 Created temporary directory: /tmp/pip-unpack-2mxw_l5z 2023-11-27T20:35:50,171 Downloading SpectraFP-1.1.1.tar.gz (5.8 MB) 2023-11-27T20:35:51,457 Added spectrafp==1.1.1 from https://files.pythonhosted.org/packages/db/10/bde199c86f8dd8e06ad3586b00976f14366169ee94acafaba9825adcd775/SpectraFP-1.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-wl93af2t' 2023-11-27T20:35:51,459 Running setup.py (path:/tmp/pip-wheel-a5e2yxpq/spectrafp_bf234dd8115f455183b6cf139ed596f6/setup.py) egg_info for package spectrafp 2023-11-27T20:35:51,460 Created temporary directory: /tmp/pip-pip-egg-info-3mqueitw 2023-11-27T20:35:51,460 Preparing metadata (setup.py): started 2023-11-27T20:35:51,461 Running command python setup.py egg_info 2023-11-27T20:35:51,895 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:472: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-27T20:35:51,895 !! 2023-11-27T20:35:51,897 ******************************************************************************** 2023-11-27T20:35:51,897 Usage of dash-separated 'description-file' will not be supported in future 2023-11-27T20:35:51,898 versions. Please use the underscore name 'description_file' instead. 2023-11-27T20:35:51,899 By 2024-Sep-26, you need to update your project and remove deprecated calls 2023-11-27T20:35:51,899 or your builds will no longer be supported. 2023-11-27T20:35:51,900 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-27T20:35:51,901 ******************************************************************************** 2023-11-27T20:35:51,902 !! 2023-11-27T20:35:51,903 opt = self.warn_dash_deprecation(opt, section) 2023-11-27T20:35:52,407 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:472: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-27T20:35:52,408 !! 2023-11-27T20:35:52,409 ******************************************************************************** 2023-11-27T20:35:52,410 Usage of dash-separated 'description-file' will not be supported in future 2023-11-27T20:35:52,410 versions. Please use the underscore name 'description_file' instead. 2023-11-27T20:35:52,412 By 2024-Sep-26, you need to update your project and remove deprecated calls 2023-11-27T20:35:52,412 or your builds will no longer be supported. 2023-11-27T20:35:52,413 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-27T20:35:52,414 ******************************************************************************** 2023-11-27T20:35:52,415 !! 2023-11-27T20:35:52,415 opt = self.warn_dash_deprecation(opt, section) 2023-11-27T20:35:52,446 running egg_info 2023-11-27T20:35:52,447 creating /tmp/pip-pip-egg-info-3mqueitw/SpectraFP.egg-info 2023-11-27T20:35:52,471 writing /tmp/pip-pip-egg-info-3mqueitw/SpectraFP.egg-info/PKG-INFO 2023-11-27T20:35:52,475 writing dependency_links to /tmp/pip-pip-egg-info-3mqueitw/SpectraFP.egg-info/dependency_links.txt 2023-11-27T20:35:52,477 writing requirements to /tmp/pip-pip-egg-info-3mqueitw/SpectraFP.egg-info/requires.txt 2023-11-27T20:35:52,478 writing top-level names to /tmp/pip-pip-egg-info-3mqueitw/SpectraFP.egg-info/top_level.txt 2023-11-27T20:35:52,479 writing manifest file '/tmp/pip-pip-egg-info-3mqueitw/SpectraFP.egg-info/SOURCES.txt' 2023-11-27T20:35:52,555 reading manifest file '/tmp/pip-pip-egg-info-3mqueitw/SpectraFP.egg-info/SOURCES.txt' 2023-11-27T20:35:52,556 reading manifest template 'MANIFEST.in' 2023-11-27T20:35:52,558 adding license file 'LICENSE' 2023-11-27T20:35:52,560 writing manifest file '/tmp/pip-pip-egg-info-3mqueitw/SpectraFP.egg-info/SOURCES.txt' 2023-11-27T20:35:52,667 Preparing metadata (setup.py): finished with status 'done' 2023-11-27T20:35:52,671 Source in /tmp/pip-wheel-a5e2yxpq/spectrafp_bf234dd8115f455183b6cf139ed596f6 has version 1.1.1, which satisfies requirement spectrafp==1.1.1 from https://files.pythonhosted.org/packages/db/10/bde199c86f8dd8e06ad3586b00976f14366169ee94acafaba9825adcd775/SpectraFP-1.1.1.tar.gz 2023-11-27T20:35:52,672 Removed spectrafp==1.1.1 from https://files.pythonhosted.org/packages/db/10/bde199c86f8dd8e06ad3586b00976f14366169ee94acafaba9825adcd775/SpectraFP-1.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-wl93af2t' 2023-11-27T20:35:52,676 Created temporary directory: /tmp/pip-unpack-py4wzb8r 2023-11-27T20:35:52,677 Created temporary directory: /tmp/pip-unpack-_yrqps04 2023-11-27T20:35:52,684 Building wheels for collected packages: spectrafp 2023-11-27T20:35:52,688 Created temporary directory: /tmp/pip-wheel-mts9gopt 2023-11-27T20:35:52,688 Building wheel for spectrafp (setup.py): started 2023-11-27T20:35:52,689 Destination directory: /tmp/pip-wheel-mts9gopt 2023-11-27T20:35:52,690 Running command python setup.py bdist_wheel 2023-11-27T20:35:53,131 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:472: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-27T20:35:53,132 !! 2023-11-27T20:35:53,133 ******************************************************************************** 2023-11-27T20:35:53,133 Usage of dash-separated 'description-file' will not be supported in future 2023-11-27T20:35:53,134 versions. Please use the underscore name 'description_file' instead. 2023-11-27T20:35:53,135 By 2024-Sep-26, you need to update your project and remove deprecated calls 2023-11-27T20:35:53,135 or your builds will no longer be supported. 2023-11-27T20:35:53,137 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-27T20:35:53,137 ******************************************************************************** 2023-11-27T20:35:53,138 !! 2023-11-27T20:35:53,139 opt = self.warn_dash_deprecation(opt, section) 2023-11-27T20:35:53,637 /usr/local/lib/python3.11/dist-packages/setuptools/dist.py:472: SetuptoolsDeprecationWarning: Invalid dash-separated options 2023-11-27T20:35:53,638 !! 2023-11-27T20:35:53,639 ******************************************************************************** 2023-11-27T20:35:53,640 Usage of dash-separated 'description-file' will not be supported in future 2023-11-27T20:35:53,640 versions. Please use the underscore name 'description_file' instead. 2023-11-27T20:35:53,641 By 2024-Sep-26, you need to update your project and remove deprecated calls 2023-11-27T20:35:53,642 or your builds will no longer be supported. 2023-11-27T20:35:53,643 See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. 2023-11-27T20:35:53,643 ******************************************************************************** 2023-11-27T20:35:53,644 !! 2023-11-27T20:35:53,645 opt = self.warn_dash_deprecation(opt, section) 2023-11-27T20:35:53,668 running bdist_wheel 2023-11-27T20:35:53,759 running build 2023-11-27T20:35:53,759 running build_py 2023-11-27T20:35:53,785 creating build 2023-11-27T20:35:53,786 creating build/lib 2023-11-27T20:35:53,786 creating build/lib/SpectraFP 2023-11-27T20:35:53,788 copying SpectraFP/spectrafp.py -> build/lib/SpectraFP 2023-11-27T20:35:53,790 copying SpectraFP/__main__.py -> build/lib/SpectraFP 2023-11-27T20:35:53,792 copying SpectraFP/fastsimilarity.py -> build/lib/SpectraFP 2023-11-27T20:35:53,794 copying SpectraFP/__init__.py -> build/lib/SpectraFP 2023-11-27T20:35:53,795 running egg_info 2023-11-27T20:35:53,849 writing SpectraFP.egg-info/PKG-INFO 2023-11-27T20:35:53,851 writing dependency_links to SpectraFP.egg-info/dependency_links.txt 2023-11-27T20:35:53,853 writing requirements to SpectraFP.egg-info/requires.txt 2023-11-27T20:35:53,854 writing top-level names to SpectraFP.egg-info/top_level.txt 2023-11-27T20:35:53,879 reading manifest file 'SpectraFP.egg-info/SOURCES.txt' 2023-11-27T20:35:53,881 reading manifest template 'MANIFEST.in' 2023-11-27T20:35:53,882 adding license file 'LICENSE' 2023-11-27T20:35:53,884 writing manifest file 'SpectraFP.egg-info/SOURCES.txt' 2023-11-27T20:35:53,886 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SpectraFP.data' is absent from the `packages` configuration. 2023-11-27T20:35:53,887 !! 2023-11-27T20:35:53,888 ******************************************************************************** 2023-11-27T20:35:53,888 ############################ 2023-11-27T20:35:53,889 # Package would be ignored # 2023-11-27T20:35:53,889 ############################ 2023-11-27T20:35:53,889 Python recognizes 'SpectraFP.data' as an importable package[^1], 2023-11-27T20:35:53,890 but it is absent from setuptools' `packages` configuration. 2023-11-27T20:35:53,891 This leads to an ambiguous overall configuration. If you want to distribute this 2023-11-27T20:35:53,891 package, please make sure that 'SpectraFP.data' is explicitly added 2023-11-27T20:35:53,892 to the `packages` configuration field. 2023-11-27T20:35:53,893 Alternatively, you can also rely on setuptools' discovery methods 2023-11-27T20:35:53,894 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2023-11-27T20:35:53,895 instead of `find_packages(...)`/`find:`). 2023-11-27T20:35:53,896 You can read more about "package discovery" on setuptools documentation page: 2023-11-27T20:35:53,897 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2023-11-27T20:35:53,902 If you don't want 'SpectraFP.data' to be distributed and are 2023-11-27T20:35:53,916 already explicitly excluding 'SpectraFP.data' via 2023-11-27T20:35:53,923 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2023-11-27T20:35:53,924 you can try to use `exclude_package_data`, or `include-package-data=False` in 2023-11-27T20:35:53,924 combination with a more fine grained `package-data` configuration. 2023-11-27T20:35:53,925 You can read more about "package data files" on setuptools documentation page: 2023-11-27T20:35:53,926 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2023-11-27T20:35:53,928 [^1]: For Python, any directory (with suitable naming) can be imported, 2023-11-27T20:35:53,929 even if it does not contain any `.py` files. 2023-11-27T20:35:53,929 On the other hand, currently there is no concept of package data 2023-11-27T20:35:53,930 directory, all directories are treated like packages. 2023-11-27T20:35:53,930 ******************************************************************************** 2023-11-27T20:35:53,931 !! 2023-11-27T20:35:53,934 check.warn(importable) 2023-11-27T20:35:53,945 creating build/lib/SpectraFP/data 2023-11-27T20:35:53,950 copying SpectraFP/data/df_l0.pkl -> build/lib/SpectraFP/data 2023-11-27T20:35:53,951 copying SpectraFP/data/df_l1.pkl -> build/lib/SpectraFP/data 2023-11-27T20:35:53,952 copying SpectraFP/data/df_l2.pkl -> build/lib/SpectraFP/data 2023-11-27T20:35:53,970 copying SpectraFP/data/df_l3.pkl -> build/lib/SpectraFP/data 2023-11-27T20:35:53,990 copying SpectraFP/data/df_l4.pkl -> build/lib/SpectraFP/data 2023-11-27T20:35:54,009 copying SpectraFP/data/multiplicities.csv -> build/lib/SpectraFP/data 2023-11-27T20:35:54,035 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2023-11-27T20:35:54,035 !! 2023-11-27T20:35:54,036 ******************************************************************************** 2023-11-27T20:35:54,037 Please avoid running ``setup.py`` directly. 2023-11-27T20:35:54,037 Instead, use pypa/build, pypa/installer or other 2023-11-27T20:35:54,037 standards-based tools. 2023-11-27T20:35:54,038 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2023-11-27T20:35:54,039 ******************************************************************************** 2023-11-27T20:35:54,039 !! 2023-11-27T20:35:54,040 self.initialize_options() 2023-11-27T20:35:54,062 installing to build/bdist.linux-armv7l/wheel 2023-11-27T20:35:54,063 running install 2023-11-27T20:35:54,087 running install_lib 2023-11-27T20:35:54,112 creating build/bdist.linux-armv7l 2023-11-27T20:35:54,112 creating build/bdist.linux-armv7l/wheel 2023-11-27T20:35:54,114 creating build/bdist.linux-armv7l/wheel/SpectraFP 2023-11-27T20:35:54,115 copying build/lib/SpectraFP/spectrafp.py -> build/bdist.linux-armv7l/wheel/SpectraFP 2023-11-27T20:35:54,119 creating build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-11-27T20:35:54,120 copying build/lib/SpectraFP/data/multiplicities.csv -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-11-27T20:35:54,122 copying build/lib/SpectraFP/data/df_l3.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-11-27T20:35:54,139 copying build/lib/SpectraFP/data/df_l4.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-11-27T20:35:54,155 copying build/lib/SpectraFP/data/df_l0.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-11-27T20:35:54,190 copying build/lib/SpectraFP/data/df_l2.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-11-27T20:35:54,208 copying build/lib/SpectraFP/data/df_l1.pkl -> build/bdist.linux-armv7l/wheel/SpectraFP/data 2023-11-27T20:35:54,232 copying build/lib/SpectraFP/__main__.py -> build/bdist.linux-armv7l/wheel/SpectraFP 2023-11-27T20:35:54,233 copying build/lib/SpectraFP/fastsimilarity.py -> build/bdist.linux-armv7l/wheel/SpectraFP 2023-11-27T20:35:54,236 copying build/lib/SpectraFP/__init__.py -> build/bdist.linux-armv7l/wheel/SpectraFP 2023-11-27T20:35:54,237 running install_egg_info 2023-11-27T20:35:54,266 Copying SpectraFP.egg-info to build/bdist.linux-armv7l/wheel/SpectraFP-1.1.1-py3.11.egg-info 2023-11-27T20:35:54,275 running install_scripts 2023-11-27T20:35:54,289 creating build/bdist.linux-armv7l/wheel/SpectraFP-1.1.1.dist-info/WHEEL 2023-11-27T20:35:54,292 creating '/tmp/pip-wheel-mts9gopt/SpectraFP-1.1.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2023-11-27T20:35:54,294 adding 'SpectraFP/__init__.py' 2023-11-27T20:35:54,295 adding 'SpectraFP/__main__.py' 2023-11-27T20:35:54,296 adding 'SpectraFP/fastsimilarity.py' 2023-11-27T20:35:54,299 adding 'SpectraFP/spectrafp.py' 2023-11-27T20:35:54,625 adding 'SpectraFP/data/df_l0.pkl' 2023-11-27T20:35:54,807 adding 'SpectraFP/data/df_l1.pkl' 2023-11-27T20:35:54,959 adding 'SpectraFP/data/df_l2.pkl' 2023-11-27T20:35:55,095 adding 'SpectraFP/data/df_l3.pkl' 2023-11-27T20:35:55,221 adding 'SpectraFP/data/df_l4.pkl' 2023-11-27T20:35:55,229 adding 'SpectraFP/data/multiplicities.csv' 2023-11-27T20:35:55,235 adding 'SpectraFP-1.1.1.dist-info/LICENSE' 2023-11-27T20:35:55,237 adding 'SpectraFP-1.1.1.dist-info/METADATA' 2023-11-27T20:35:55,238 adding 'SpectraFP-1.1.1.dist-info/WHEEL' 2023-11-27T20:35:55,239 adding 'SpectraFP-1.1.1.dist-info/top_level.txt' 2023-11-27T20:35:55,239 adding 'SpectraFP-1.1.1.dist-info/RECORD' 2023-11-27T20:35:55,305 removing build/bdist.linux-armv7l/wheel 2023-11-27T20:35:55,421 Building wheel for spectrafp (setup.py): finished with status 'done' 2023-11-27T20:35:55,480 Created wheel for spectrafp: filename=SpectraFP-1.1.1-py3-none-any.whl size=5764622 sha256=8e982254bf2f4bc0b3a70e3282c95c3c4fc617944e8371bce07fa91454b73fc0 2023-11-27T20:35:55,481 Stored in directory: /tmp/pip-ephem-wheel-cache-9n1249g7/wheels/f3/87/d0/3862101541951f5cb325730e15504e48a28bfa4de0a9ad0eec 2023-11-27T20:35:55,494 Successfully built spectrafp 2023-11-27T20:35:55,636 Removed build tracker: '/tmp/pip-build-tracker-wl93af2t'