2023-12-14T04:25:19,063 Created temporary directory: /tmp/pip-build-tracker-xw7womwl
2023-12-14T04:25:19,064 Initialized build tracking at /tmp/pip-build-tracker-xw7womwl
2023-12-14T04:25:19,065 Created build tracker: /tmp/pip-build-tracker-xw7womwl
2023-12-14T04:25:19,065 Entered build tracker: /tmp/pip-build-tracker-xw7womwl
2023-12-14T04:25:19,066 Created temporary directory: /tmp/pip-wheel-fjjwwbb0
2023-12-14T04:25:19,069 Created temporary directory: /tmp/pip-ephem-wheel-cache-xk8q8hl4
2023-12-14T04:25:19,093 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-14T04:25:19,098 2 location(s) to search for versions of sieveai:
2023-12-14T04:25:19,098 * https://pypi.org/simple/sieveai/
2023-12-14T04:25:19,098 * https://www.piwheels.org/simple/sieveai/
2023-12-14T04:25:19,098 Fetching project page and analyzing links: https://pypi.org/simple/sieveai/
2023-12-14T04:25:19,099 Getting page https://pypi.org/simple/sieveai/
2023-12-14T04:25:19,101 Found index url https://pypi.org/simple/
2023-12-14T04:25:19,354 Fetched page https://pypi.org/simple/sieveai/ as application/vnd.pypi.simple.v1+json
2023-12-14T04:25:19,355   Found link https://files.pythonhosted.org/packages/53/fb/31727fc4b169b880f83a2a6665e389bbbb64664ef2cd744a9a359b850c88/SieveAI-0.5.2023090513.tar.gz (from https://pypi.org/simple/sieveai/), version: 0.5.2023090513
2023-12-14T04:25:19,356   Found link https://files.pythonhosted.org/packages/9a/c4/8d46d57039b31e0f9e2fbf063ff0c2634f93f06d00861c7728d93b17dc5c/SieveAI-0.6.20231212.tar.gz (from https://pypi.org/simple/sieveai/), version: 0.6.20231212
2023-12-14T04:25:19,357 Fetching project page and analyzing links: https://www.piwheels.org/simple/sieveai/
2023-12-14T04:25:19,357 Getting page https://www.piwheels.org/simple/sieveai/
2023-12-14T04:25:19,359 Found index url https://www.piwheels.org/simple/
2023-12-14T04:25:19,540 Fetched page https://www.piwheels.org/simple/sieveai/ as text/html
2023-12-14T04:25:19,541 Skipping link: not a file: https://www.piwheels.org/simple/sieveai/
2023-12-14T04:25:19,542 Skipping link: not a file: https://pypi.org/simple/sieveai/
2023-12-14T04:25:19,561 Given no hashes to check 1 links for project 'sieveai': discarding no candidates
2023-12-14T04:25:19,581 Collecting sieveai==0.6.20231212
2023-12-14T04:25:19,583   Created temporary directory: /tmp/pip-unpack-x5udjvhi
2023-12-14T04:25:19,796   Downloading SieveAI-0.6.20231212.tar.gz (28 kB)
2023-12-14T04:25:19,862   Added sieveai==0.6.20231212 from https://files.pythonhosted.org/packages/9a/c4/8d46d57039b31e0f9e2fbf063ff0c2634f93f06d00861c7728d93b17dc5c/SieveAI-0.6.20231212.tar.gz to build tracker '/tmp/pip-build-tracker-xw7womwl'
2023-12-14T04:25:19,864   Running setup.py (path:/tmp/pip-wheel-fjjwwbb0/sieveai_d34b550fe9b4446692772786e9067829/setup.py) egg_info for package sieveai
2023-12-14T04:25:19,865   Created temporary directory: /tmp/pip-pip-egg-info-1n1nbmdm
2023-12-14T04:25:19,866   Preparing metadata (setup.py): started
2023-12-14T04:25:19,867   Running command python setup.py egg_info
2023-12-14T04:25:20,282   Traceback (most recent call last):
2023-12-14T04:25:20,282     File "<string>", line 2, in <module>
2023-12-14T04:25:20,283     File "<pip-setuptools-caller>", line 34, in <module>
2023-12-14T04:25:20,283     File "/tmp/pip-wheel-fjjwwbb0/sieveai_d34b550fe9b4446692772786e9067829/setup.py", line 2, in <module>
2023-12-14T04:25:20,284       from sieveai import *
2023-12-14T04:25:20,285     File "/tmp/pip-wheel-fjjwwbb0/sieveai_d34b550fe9b4446692772786e9067829/sieveai/__init__.py", line 9, in <module>
2023-12-14T04:25:20,286       from .exe import Vina
2023-12-14T04:25:20,287     File "/tmp/pip-wheel-fjjwwbb0/sieveai_d34b550fe9b4446692772786e9067829/sieveai/exe/__init__.py", line 1, in <module>
2023-12-14T04:25:20,288       from .Vina import Vina
2023-12-14T04:25:20,289     File "/tmp/pip-wheel-fjjwwbb0/sieveai_d34b550fe9b4446692772786e9067829/sieveai/exe/Vina.py", line 2, in <module>
2023-12-14T04:25:20,290       from pdbtools.pdb_selaltloc import select_by_occupancy as selAltLoc
2023-12-14T04:25:20,291   ModuleNotFoundError: No module named 'pdbtools'
2023-12-14T04:25:20,354   ERROR: python setup.py egg_info exited with 1
2023-12-14T04:25:20,367   [bold magenta]full command[/]: [blue]/usr/bin/python3 -c '
2023-12-14T04:25:20,367   exec(compile('"'"''"'"''"'"'
2023-12-14T04:25:20,367   # This is <pip-setuptools-caller> -- a caller that pip uses to run setup.py
2023-12-14T04:25:20,367   #
2023-12-14T04:25:20,367   # - It imports setuptools before invoking setup.py, to enable projects that directly
2023-12-14T04:25:20,367   #   import from `distutils.core` to work with newer packaging standards.
2023-12-14T04:25:20,367   # - It provides a clear error message when setuptools is not installed.
2023-12-14T04:25:20,367   # - It sets `sys.argv[0]` to the underlying `setup.py`, when invoking `setup.py` so
2023-12-14T04:25:20,367   #   setuptools doesn'"'"'t think the script is `-c`. This avoids the following warning:
2023-12-14T04:25:20,367   #     manifest_maker: standard file '"'"'-c'"'"' not found".
2023-12-14T04:25:20,367   # - It generates a shim setup.py, for handling setup.cfg-only projects.
2023-12-14T04:25:20,367   import os, sys, tokenize
2023-12-14T04:25:20,367   
2023-12-14T04:25:20,367   try:
2023-12-14T04:25:20,367       import setuptools
2023-12-14T04:25:20,367   except ImportError as error:
2023-12-14T04:25:20,367       print(
2023-12-14T04:25:20,367           "ERROR: Can not execute `setup.py` since setuptools is not available in "
2023-12-14T04:25:20,367           "the build environment.",
2023-12-14T04:25:20,367           file=sys.stderr,
2023-12-14T04:25:20,367       )
2023-12-14T04:25:20,367       sys.exit(1)
2023-12-14T04:25:20,367   
2023-12-14T04:25:20,367   __file__ = %r
2023-12-14T04:25:20,367   sys.argv[0] = __file__
2023-12-14T04:25:20,367   
2023-12-14T04:25:20,367   if os.path.exists(__file__):
2023-12-14T04:25:20,367       filename = __file__
2023-12-14T04:25:20,367       with tokenize.open(__file__) as f:
2023-12-14T04:25:20,367           setup_py_code = f.read()
2023-12-14T04:25:20,367   else:
2023-12-14T04:25:20,367       filename = "<auto-generated setuptools caller>"
2023-12-14T04:25:20,367       setup_py_code = "from setuptools import setup; setup()"
2023-12-14T04:25:20,367   
2023-12-14T04:25:20,367   exec(compile(setup_py_code, filename, "exec"))
2023-12-14T04:25:20,367   '"'"''"'"''"'"' % ('"'"'/tmp/pip-wheel-fjjwwbb0/sieveai_d34b550fe9b4446692772786e9067829/setup.py'"'"',), "<pip-setuptools-caller>", "exec"))' egg_info --egg-base /tmp/pip-pip-egg-info-1n1nbmdm[/]
2023-12-14T04:25:20,368   [bold magenta]cwd[/]: /tmp/pip-wheel-fjjwwbb0/sieveai_d34b550fe9b4446692772786e9067829/
2023-12-14T04:25:20,369   Preparing metadata (setup.py): finished with status 'error'
2023-12-14T04:25:20,370 ERROR: metadata generation failed
2023-12-14T04:25:20,376 Exception information:
2023-12-14T04:25:20,376 Traceback (most recent call last):
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/operations/build/metadata_legacy.py", line 64, in generate_metadata
2023-12-14T04:25:20,376     call_subprocess(
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/utils/subprocess.py", line 224, in call_subprocess
2023-12-14T04:25:20,376     raise error
2023-12-14T04:25:20,376 pip._internal.exceptions.InstallationSubprocessError: python setup.py egg_info exited with 1
2023-12-14T04:25:20,376 
2023-12-14T04:25:20,376 The above exception was the direct cause of the following exception:
2023-12-14T04:25:20,376 
2023-12-14T04:25:20,376 Traceback (most recent call last):
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/cli/base_command.py", line 180, in exc_logging_wrapper
2023-12-14T04:25:20,376     status = run_func(*args)
2023-12-14T04:25:20,376              ^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/cli/req_command.py", line 245, in wrapper
2023-12-14T04:25:20,376     return func(self, options, args)
2023-12-14T04:25:20,376            ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/commands/wheel.py", line 147, in run
2023-12-14T04:25:20,376     requirement_set = resolver.resolve(reqs, check_supported_wheels=True)
2023-12-14T04:25:20,376                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/resolver.py", line 95, in resolve
2023-12-14T04:25:20,376     result = self._result = resolver.resolve(
2023-12-14T04:25:20,376                             ^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_vendor/resolvelib/resolvers.py", line 546, in resolve
2023-12-14T04:25:20,376     state = resolution.resolve(requirements, max_rounds=max_rounds)
2023-12-14T04:25:20,376             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_vendor/resolvelib/resolvers.py", line 397, in resolve
2023-12-14T04:25:20,376     self._add_to_criteria(self.state.criteria, r, parent=None)
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_vendor/resolvelib/resolvers.py", line 173, in _add_to_criteria
2023-12-14T04:25:20,376     if not criterion.candidates:
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_vendor/resolvelib/structs.py", line 156, in __bool__
2023-12-14T04:25:20,376     return bool(self._sequence)
2023-12-14T04:25:20,376            ^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 155, in __bool__
2023-12-14T04:25:20,376     return any(self)
2023-12-14T04:25:20,376            ^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 143, in <genexpr>
2023-12-14T04:25:20,376     return (c for c in iterator if id(c) not in self._incompatible_ids)
2023-12-14T04:25:20,376            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/found_candidates.py", line 47, in _iter_built
2023-12-14T04:25:20,376     candidate = func()
2023-12-14T04:25:20,376                 ^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/factory.py", line 211, in _make_candidate_from_link
2023-12-14T04:25:20,376     self._link_candidate_cache[link] = LinkCandidate(
2023-12-14T04:25:20,376                                        ^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 293, in __init__
2023-12-14T04:25:20,376     super().__init__(
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 156, in __init__
2023-12-14T04:25:20,376     self.dist = self._prepare()
2023-12-14T04:25:20,376                 ^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 225, in _prepare
2023-12-14T04:25:20,376     dist = self._prepare_distribution()
2023-12-14T04:25:20,376            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/resolution/resolvelib/candidates.py", line 304, in _prepare_distribution
2023-12-14T04:25:20,376     return preparer.prepare_linked_requirement(self._ireq, parallel_builds=True)
2023-12-14T04:25:20,376            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/operations/prepare.py", line 525, in prepare_linked_requirement
2023-12-14T04:25:20,376     return self._prepare_linked_requirement(req, parallel_builds)
2023-12-14T04:25:20,376            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/operations/prepare.py", line 640, in _prepare_linked_requirement
2023-12-14T04:25:20,376     dist = _get_prepared_distribution(
2023-12-14T04:25:20,376            ^^^^^^^^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/operations/prepare.py", line 71, in _get_prepared_distribution
2023-12-14T04:25:20,376     abstract_dist.prepare_distribution_metadata(
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/distributions/sdist.py", line 67, in prepare_distribution_metadata
2023-12-14T04:25:20,376     self.req.prepare_metadata()
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/req/req_install.py", line 583, in prepare_metadata
2023-12-14T04:25:20,376     self.metadata_directory = generate_metadata_legacy(
2023-12-14T04:25:20,376                               ^^^^^^^^^^^^^^^^^^^^^^^^^
2023-12-14T04:25:20,376   File "/home/piwheels/.local/lib/python3.11/site-packages/pip/_internal/operations/build/metadata_legacy.py", line 71, in generate_metadata
2023-12-14T04:25:20,376     raise MetadataGenerationFailed(package_details=details) from error
2023-12-14T04:25:20,376 pip._internal.exceptions.MetadataGenerationFailed: metadata generation failed
2023-12-14T04:25:20,389 Removed sieveai==0.6.20231212 from https://files.pythonhosted.org/packages/9a/c4/8d46d57039b31e0f9e2fbf063ff0c2634f93f06d00861c7728d93b17dc5c/SieveAI-0.6.20231212.tar.gz from build tracker '/tmp/pip-build-tracker-xw7womwl'
2023-12-14T04:25:20,390 Removed build tracker: '/tmp/pip-build-tracker-xw7womwl'