2023-12-20T02:34:17,574 Created temporary directory: /tmp/pip-build-tracker-e6vkjao0
2023-12-20T02:34:17,575 Initialized build tracking at /tmp/pip-build-tracker-e6vkjao0
2023-12-20T02:34:17,576 Created build tracker: /tmp/pip-build-tracker-e6vkjao0
2023-12-20T02:34:17,576 Entered build tracker: /tmp/pip-build-tracker-e6vkjao0
2023-12-20T02:34:17,577 Created temporary directory: /tmp/pip-wheel-m6btgf1b
2023-12-20T02:34:17,580 Created temporary directory: /tmp/pip-ephem-wheel-cache-w8gxqyd9
2023-12-20T02:34:17,604 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-20T02:34:17,608 2 location(s) to search for versions of syntheseus:
2023-12-20T02:34:17,608 * https://pypi.org/simple/syntheseus/
2023-12-20T02:34:17,608 * https://www.piwheels.org/simple/syntheseus/
2023-12-20T02:34:17,608 Fetching project page and analyzing links: https://pypi.org/simple/syntheseus/
2023-12-20T02:34:17,609 Getting page https://pypi.org/simple/syntheseus/
2023-12-20T02:34:17,611 Found index url https://pypi.org/simple/
2023-12-20T02:34:17,825 Fetched page https://pypi.org/simple/syntheseus/ as application/vnd.pypi.simple.v1+json
2023-12-20T02:34:17,827   Skipping link: No binaries permitted for syntheseus: https://files.pythonhosted.org/packages/72/25/d38f1b08e3113fcfc912158350c8d7b0150b98a3e1ab1ae2a4754e7c0d39/syntheseus-0.3.0-py3-none-any.whl (from https://pypi.org/simple/syntheseus/) (requires-python:>=3.7)
2023-12-20T02:34:17,828   Found link https://files.pythonhosted.org/packages/6f/05/55f01918e2c389864c5182d1452293afe24211549dab3bdca9525bdce9d2/syntheseus-0.3.0.tar.gz (from https://pypi.org/simple/syntheseus/) (requires-python:>=3.7), version: 0.3.0
2023-12-20T02:34:17,828 Fetching project page and analyzing links: https://www.piwheels.org/simple/syntheseus/
2023-12-20T02:34:17,829 Getting page https://www.piwheels.org/simple/syntheseus/
2023-12-20T02:34:17,830 Found index url https://www.piwheels.org/simple/
2023-12-20T02:34:17,988 Fetched page https://www.piwheels.org/simple/syntheseus/ as text/html
2023-12-20T02:34:17,989 Skipping link: not a file: https://www.piwheels.org/simple/syntheseus/
2023-12-20T02:34:17,990 Skipping link: not a file: https://pypi.org/simple/syntheseus/
2023-12-20T02:34:18,008 Given no hashes to check 1 links for project 'syntheseus': discarding no candidates
2023-12-20T02:34:18,026 Collecting syntheseus==0.3.0
2023-12-20T02:34:18,029   Created temporary directory: /tmp/pip-unpack-56r4tclj
2023-12-20T02:34:18,248   Downloading syntheseus-0.3.0.tar.gz (410 kB)
2023-12-20T02:34:18,654   Added syntheseus==0.3.0 from https://files.pythonhosted.org/packages/6f/05/55f01918e2c389864c5182d1452293afe24211549dab3bdca9525bdce9d2/syntheseus-0.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-e6vkjao0'
2023-12-20T02:34:18,661   Created temporary directory: /tmp/pip-build-env-qicxgr68
2023-12-20T02:34:18,666   Installing build dependencies: started
2023-12-20T02:34:18,667   Running command pip subprocess to install build dependencies
2023-12-20T02:34:19,831   Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-12-20T02:34:20,361   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-20T02:34:21,823   Collecting setuptools>=45
2023-12-20T02:34:21,838     Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.2-py3-none-any.whl (819 kB)
2023-12-20T02:34:22,146   Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2)
2023-12-20T02:34:22,162     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB)
2023-12-20T02:34:22,499   Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2)
2023-12-20T02:34:22,517     Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB)
2023-12-20T02:34:22,638   Collecting typing-extensions (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2)
2023-12-20T02:34:22,652     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.9.0-py3-none-any.whl (32 kB)
2023-12-20T02:34:25,176   Installing collected packages: typing-extensions, setuptools, packaging, setuptools_scm
2023-12-20T02:34:27,929   Successfully installed packaging-23.2 setuptools-69.0.2 setuptools_scm-8.0.4 typing-extensions-4.9.0
2023-12-20T02:34:28,492   Installing build dependencies: finished with status 'done'
2023-12-20T02:34:28,496   Getting requirements to build wheel: started
2023-12-20T02:34:28,497   Running command Getting requirements to build wheel
2023-12-20T02:34:29,390   running egg_info
2023-12-20T02:34:29,395   writing syntheseus.egg-info/PKG-INFO
2023-12-20T02:34:29,403   writing dependency_links to syntheseus.egg-info/dependency_links.txt
2023-12-20T02:34:29,405   writing entry points to syntheseus.egg-info/entry_points.txt
2023-12-20T02:34:29,409   writing requirements to syntheseus.egg-info/requires.txt
2023-12-20T02:34:29,411   writing top-level names to syntheseus.egg-info/top_level.txt
2023-12-20T02:34:29,469   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-12-20T02:34:29,472   reading manifest file 'syntheseus.egg-info/SOURCES.txt'
2023-12-20T02:34:29,486   adding license file 'LICENSE'
2023-12-20T02:34:29,493   writing manifest file 'syntheseus.egg-info/SOURCES.txt'
2023-12-20T02:34:29,612   Getting requirements to build wheel: finished with status 'done'
2023-12-20T02:34:29,624   Installing backend dependencies: started
2023-12-20T02:34:29,625   Running command pip subprocess to install backend dependencies
2023-12-20T02:34:30,778   Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2023-12-20T02:34:31,313   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2023-12-20T02:34:31,802   Collecting wheel
2023-12-20T02:34:31,819     Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB)
2023-12-20T02:34:34,081   Installing collected packages: wheel
2023-12-20T02:34:34,312     Creating /tmp/pip-build-env-qicxgr68/normal/local/bin
2023-12-20T02:34:34,315     changing mode of /tmp/pip-build-env-qicxgr68/normal/local/bin/wheel to 755
2023-12-20T02:34:34,326   Successfully installed wheel-0.42.0
2023-12-20T02:34:34,831   Installing backend dependencies: finished with status 'done'
2023-12-20T02:34:34,833   Created temporary directory: /tmp/pip-modern-metadata-t2xxjw2r
2023-12-20T02:34:34,835   Preparing metadata (pyproject.toml): started
2023-12-20T02:34:34,837   Running command Preparing metadata (pyproject.toml)
2023-12-20T02:34:35,727   running dist_info
2023-12-20T02:34:35,732   creating /tmp/pip-modern-metadata-t2xxjw2r/syntheseus.egg-info
2023-12-20T02:34:35,738   writing /tmp/pip-modern-metadata-t2xxjw2r/syntheseus.egg-info/PKG-INFO
2023-12-20T02:34:35,746   writing dependency_links to /tmp/pip-modern-metadata-t2xxjw2r/syntheseus.egg-info/dependency_links.txt
2023-12-20T02:34:35,748   writing entry points to /tmp/pip-modern-metadata-t2xxjw2r/syntheseus.egg-info/entry_points.txt
2023-12-20T02:34:35,752   writing requirements to /tmp/pip-modern-metadata-t2xxjw2r/syntheseus.egg-info/requires.txt
2023-12-20T02:34:35,753   writing top-level names to /tmp/pip-modern-metadata-t2xxjw2r/syntheseus.egg-info/top_level.txt
2023-12-20T02:34:35,754   writing manifest file '/tmp/pip-modern-metadata-t2xxjw2r/syntheseus.egg-info/SOURCES.txt'
2023-12-20T02:34:35,816   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-12-20T02:34:35,820   reading manifest file '/tmp/pip-modern-metadata-t2xxjw2r/syntheseus.egg-info/SOURCES.txt'
2023-12-20T02:34:35,822   adding license file 'LICENSE'
2023-12-20T02:34:35,826   writing manifest file '/tmp/pip-modern-metadata-t2xxjw2r/syntheseus.egg-info/SOURCES.txt'
2023-12-20T02:34:35,827   creating '/tmp/pip-modern-metadata-t2xxjw2r/syntheseus-0.3.0.dist-info'
2023-12-20T02:34:35,994   Preparing metadata (pyproject.toml): finished with status 'done'
2023-12-20T02:34:35,999   Source in /tmp/pip-wheel-m6btgf1b/syntheseus_fc422518ecab445abed4a24ef6e19a79 has version 0.3.0, which satisfies requirement syntheseus==0.3.0 from https://files.pythonhosted.org/packages/6f/05/55f01918e2c389864c5182d1452293afe24211549dab3bdca9525bdce9d2/syntheseus-0.3.0.tar.gz
2023-12-20T02:34:36,000   Removed syntheseus==0.3.0 from https://files.pythonhosted.org/packages/6f/05/55f01918e2c389864c5182d1452293afe24211549dab3bdca9525bdce9d2/syntheseus-0.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-e6vkjao0'
2023-12-20T02:34:36,007 Created temporary directory: /tmp/pip-unpack-y33n0kth
2023-12-20T02:34:36,008 Created temporary directory: /tmp/pip-unpack-ob8u6rah
2023-12-20T02:34:36,057 Building wheels for collected packages: syntheseus
2023-12-20T02:34:36,062   Created temporary directory: /tmp/pip-wheel-ugkd58ho
2023-12-20T02:34:36,062   Destination directory: /tmp/pip-wheel-ugkd58ho
2023-12-20T02:34:36,064   Building wheel for syntheseus (pyproject.toml): started
2023-12-20T02:34:36,066   Running command Building wheel for syntheseus (pyproject.toml)
2023-12-20T02:34:36,897   running bdist_wheel
2023-12-20T02:34:36,919   running build
2023-12-20T02:34:36,920   running build_py
2023-12-20T02:34:36,925   creating build
2023-12-20T02:34:36,926   creating build/lib
2023-12-20T02:34:36,927   creating build/lib/syntheseus
2023-12-20T02:34:36,928   copying syntheseus/__init__.py -> build/lib/syntheseus
2023-12-20T02:34:36,930   creating build/lib/syntheseus/interface
2023-12-20T02:34:36,931   copying syntheseus/interface/molecule.py -> build/lib/syntheseus/interface
2023-12-20T02:34:36,933   copying syntheseus/interface/models.py -> build/lib/syntheseus/interface
2023-12-20T02:34:36,935   copying syntheseus/interface/__init__.py -> build/lib/syntheseus/interface
2023-12-20T02:34:36,937   copying syntheseus/interface/bag.py -> build/lib/syntheseus/interface
2023-12-20T02:34:36,939   copying syntheseus/interface/typed_dict.py -> build/lib/syntheseus/interface
2023-12-20T02:34:36,941   creating build/lib/syntheseus/cli
2023-12-20T02:34:36,942   copying syntheseus/cli/search.py -> build/lib/syntheseus/cli
2023-12-20T02:34:36,945   copying syntheseus/cli/__init__.py -> build/lib/syntheseus/cli
2023-12-20T02:34:36,946   copying syntheseus/cli/main.py -> build/lib/syntheseus/cli
2023-12-20T02:34:36,948   copying syntheseus/cli/eval_single_step.py -> build/lib/syntheseus/cli
2023-12-20T02:34:36,951   creating build/lib/syntheseus/reaction_prediction
2023-12-20T02:34:36,952   copying syntheseus/reaction_prediction/__init__.py -> build/lib/syntheseus/reaction_prediction
2023-12-20T02:34:36,955   creating build/lib/syntheseus/search
2023-12-20T02:34:36,956   copying syntheseus/search/chem.py -> build/lib/syntheseus/search
2023-12-20T02:34:36,957   copying syntheseus/search/visualization.py -> build/lib/syntheseus/search
2023-12-20T02:34:36,960   copying syntheseus/search/mol_inventory.py -> build/lib/syntheseus/search
2023-12-20T02:34:36,962   copying syntheseus/search/__init__.py -> build/lib/syntheseus/search
2023-12-20T02:34:36,964   creating build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,965   copying syntheseus/reaction_prediction/utils/parallel.py -> build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,967   copying syntheseus/reaction_prediction/utils/model_loading.py -> build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,969   copying syntheseus/reaction_prediction/utils/downloading.py -> build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,970   copying syntheseus/reaction_prediction/utils/inference.py -> build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,972   copying syntheseus/reaction_prediction/utils/__init__.py -> build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,974   copying syntheseus/reaction_prediction/utils/metrics.py -> build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,976   copying syntheseus/reaction_prediction/utils/misc.py -> build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,978   copying syntheseus/reaction_prediction/utils/syntheseus_wrapper.py -> build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,980   copying syntheseus/reaction_prediction/utils/config.py -> build/lib/syntheseus/reaction_prediction/utils
2023-12-20T02:34:36,982   creating build/lib/syntheseus/reaction_prediction/cli
2023-12-20T02:34:36,983   copying syntheseus/reaction_prediction/cli/__init__.py -> build/lib/syntheseus/reaction_prediction/cli
2023-12-20T02:34:36,985   creating build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:36,986   copying syntheseus/reaction_prediction/inference/chemformer.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:36,988   copying syntheseus/reaction_prediction/inference/root_aligned.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:36,990   copying syntheseus/reaction_prediction/inference/local_retro.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:36,992   copying syntheseus/reaction_prediction/inference/mhnreact.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:36,994   copying syntheseus/reaction_prediction/inference/base.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:36,996   copying syntheseus/reaction_prediction/inference/gln.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:36,998   copying syntheseus/reaction_prediction/inference/__init__.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,000   copying syntheseus/reaction_prediction/inference/retro_knn.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,002   copying syntheseus/reaction_prediction/inference/config.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,004   copying syntheseus/reaction_prediction/inference/megan.py -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,007   creating build/lib/syntheseus/reaction_prediction/models
2023-12-20T02:34:37,008   copying syntheseus/reaction_prediction/models/__init__.py -> build/lib/syntheseus/reaction_prediction/models
2023-12-20T02:34:37,009   copying syntheseus/reaction_prediction/models/retro_knn.py -> build/lib/syntheseus/reaction_prediction/models
2023-12-20T02:34:37,012   creating build/lib/syntheseus/reaction_prediction/data
2023-12-20T02:34:37,013   copying syntheseus/reaction_prediction/data/reaction_sample.py -> build/lib/syntheseus/reaction_prediction/data
2023-12-20T02:34:37,015   copying syntheseus/reaction_prediction/data/dataset.py -> build/lib/syntheseus/reaction_prediction/data
2023-12-20T02:34:37,017   copying syntheseus/reaction_prediction/data/__init__.py -> build/lib/syntheseus/reaction_prediction/data
2023-12-20T02:34:37,019   creating build/lib/syntheseus/reaction_prediction/chem
2023-12-20T02:34:37,020   copying syntheseus/reaction_prediction/chem/__init__.py -> build/lib/syntheseus/reaction_prediction/chem
2023-12-20T02:34:37,022   copying syntheseus/reaction_prediction/chem/utils.py -> build/lib/syntheseus/reaction_prediction/chem
2023-12-20T02:34:37,024   creating build/lib/syntheseus/search/reaction_models
2023-12-20T02:34:37,025   copying syntheseus/search/reaction_models/base.py -> build/lib/syntheseus/search/reaction_models
2023-12-20T02:34:37,027   copying syntheseus/search/reaction_models/toy.py -> build/lib/syntheseus/search/reaction_models
2023-12-20T02:34:37,029   copying syntheseus/search/reaction_models/__init__.py -> build/lib/syntheseus/search/reaction_models
2023-12-20T02:34:37,032   creating build/lib/syntheseus/search/graph
2023-12-20T02:34:37,033   copying syntheseus/search/graph/route.py -> build/lib/syntheseus/search/graph
2023-12-20T02:34:37,035   copying syntheseus/search/graph/and_or.py -> build/lib/syntheseus/search/graph
2023-12-20T02:34:37,037   copying syntheseus/search/graph/standardization.py -> build/lib/syntheseus/search/graph
2023-12-20T02:34:37,039   copying syntheseus/search/graph/node.py -> build/lib/syntheseus/search/graph
2023-12-20T02:34:37,041   copying syntheseus/search/graph/__init__.py -> build/lib/syntheseus/search/graph
2023-12-20T02:34:37,043   copying syntheseus/search/graph/molset.py -> build/lib/syntheseus/search/graph
2023-12-20T02:34:37,045   copying syntheseus/search/graph/base_graph.py -> build/lib/syntheseus/search/graph
2023-12-20T02:34:37,049   creating build/lib/syntheseus/search/utils
2023-12-20T02:34:37,050   copying syntheseus/search/utils/__init__.py -> build/lib/syntheseus/search/utils
2023-12-20T02:34:37,053   copying syntheseus/search/utils/misc.py -> build/lib/syntheseus/search/utils
2023-12-20T02:34:37,056   creating build/lib/syntheseus/search/analysis
2023-12-20T02:34:37,057   copying syntheseus/search/analysis/solution_time.py -> build/lib/syntheseus/search/analysis
2023-12-20T02:34:37,060   copying syntheseus/search/analysis/__init__.py -> build/lib/syntheseus/search/analysis
2023-12-20T02:34:37,061   copying syntheseus/search/analysis/diversity.py -> build/lib/syntheseus/search/analysis
2023-12-20T02:34:37,063   copying syntheseus/search/analysis/route_extraction.py -> build/lib/syntheseus/search/analysis
2023-12-20T02:34:37,066   creating build/lib/syntheseus/search/algorithms
2023-12-20T02:34:37,067   copying syntheseus/search/algorithms/base.py -> build/lib/syntheseus/search/algorithms
2023-12-20T02:34:37,070   copying syntheseus/search/algorithms/mixins.py -> build/lib/syntheseus/search/algorithms
2023-12-20T02:34:37,071   copying syntheseus/search/algorithms/pdvn.py -> build/lib/syntheseus/search/algorithms
2023-12-20T02:34:37,074   copying syntheseus/search/algorithms/__init__.py -> build/lib/syntheseus/search/algorithms
2023-12-20T02:34:37,075   copying syntheseus/search/algorithms/breadth_first.py -> build/lib/syntheseus/search/algorithms
2023-12-20T02:34:37,077   creating build/lib/syntheseus/search/node_evaluation
2023-12-20T02:34:37,078   copying syntheseus/search/node_evaluation/common.py -> build/lib/syntheseus/search/node_evaluation
2023-12-20T02:34:37,080   copying syntheseus/search/node_evaluation/base.py -> build/lib/syntheseus/search/node_evaluation
2023-12-20T02:34:37,083   copying syntheseus/search/node_evaluation/__init__.py -> build/lib/syntheseus/search/node_evaluation
2023-12-20T02:34:37,085   creating build/lib/syntheseus/search/graph/message_passing
2023-12-20T02:34:37,086   copying syntheseus/search/graph/message_passing/__init__.py -> build/lib/syntheseus/search/graph/message_passing
2023-12-20T02:34:37,088   copying syntheseus/search/graph/message_passing/run.py -> build/lib/syntheseus/search/graph/message_passing
2023-12-20T02:34:37,090   copying syntheseus/search/graph/message_passing/update_functions.py -> build/lib/syntheseus/search/graph/message_passing
2023-12-20T02:34:37,093   creating build/lib/syntheseus/search/algorithms/best_first
2023-12-20T02:34:37,094   copying syntheseus/search/algorithms/best_first/base.py -> build/lib/syntheseus/search/algorithms/best_first
2023-12-20T02:34:37,096   copying syntheseus/search/algorithms/best_first/__init__.py -> build/lib/syntheseus/search/algorithms/best_first
2023-12-20T02:34:37,098   copying syntheseus/search/algorithms/best_first/retro_star.py -> build/lib/syntheseus/search/algorithms/best_first
2023-12-20T02:34:37,101   creating build/lib/syntheseus/search/algorithms/mcts
2023-12-20T02:34:37,102   copying syntheseus/search/algorithms/mcts/base.py -> build/lib/syntheseus/search/algorithms/mcts
2023-12-20T02:34:37,105   copying syntheseus/search/algorithms/mcts/__init__.py -> build/lib/syntheseus/search/algorithms/mcts
2023-12-20T02:34:37,106   copying syntheseus/search/algorithms/mcts/molset.py -> build/lib/syntheseus/search/algorithms/mcts
2023-12-20T02:34:37,108   running egg_info
2023-12-20T02:34:37,113   writing syntheseus.egg-info/PKG-INFO
2023-12-20T02:34:37,121   writing dependency_links to syntheseus.egg-info/dependency_links.txt
2023-12-20T02:34:37,122   writing entry points to syntheseus.egg-info/entry_points.txt
2023-12-20T02:34:37,126   writing requirements to syntheseus.egg-info/requires.txt
2023-12-20T02:34:37,127   writing top-level names to syntheseus.egg-info/top_level.txt
2023-12-20T02:34:37,170   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2023-12-20T02:34:37,173   reading manifest file 'syntheseus.egg-info/SOURCES.txt'
2023-12-20T02:34:37,186   adding license file 'LICENSE'
2023-12-20T02:34:37,193   writing manifest file 'syntheseus.egg-info/SOURCES.txt'
2023-12-20T02:34:37,196   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.reaction_prediction.environment_gln' is absent from the `packages` configuration.
2023-12-20T02:34:37,197   !!

2023-12-20T02:34:37,198           ********************************************************************************
2023-12-20T02:34:37,198           ############################
2023-12-20T02:34:37,199           # Package would be ignored #
2023-12-20T02:34:37,199           ############################
2023-12-20T02:34:37,200           Python recognizes 'syntheseus.reaction_prediction.environment_gln' as an importable package[^1],
2023-12-20T02:34:37,200           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,202           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,202           package, please make sure that 'syntheseus.reaction_prediction.environment_gln' is explicitly added
2023-12-20T02:34:37,203           to the `packages` configuration field.

2023-12-20T02:34:37,204           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,204           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,205           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,206           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,207           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,208           If you don't want 'syntheseus.reaction_prediction.environment_gln' to be distributed and are
2023-12-20T02:34:37,208           already explicitly excluding 'syntheseus.reaction_prediction.environment_gln' via
2023-12-20T02:34:37,209           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,209           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,210           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,211           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,212           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,214           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,214                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,215                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,216                 directory, all directories are treated like packages.
2023-12-20T02:34:37,216           ********************************************************************************

2023-12-20T02:34:37,217   !!
2023-12-20T02:34:37,218     check.warn(importable)
2023-12-20T02:34:37,218   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests' is absent from the `packages` configuration.
2023-12-20T02:34:37,219   !!

2023-12-20T02:34:37,220           ********************************************************************************
2023-12-20T02:34:37,221           ############################
2023-12-20T02:34:37,221           # Package would be ignored #
2023-12-20T02:34:37,222           ############################
2023-12-20T02:34:37,222           Python recognizes 'syntheseus.tests' as an importable package[^1],
2023-12-20T02:34:37,223           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,224           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,224           package, please make sure that 'syntheseus.tests' is explicitly added
2023-12-20T02:34:37,225           to the `packages` configuration field.

2023-12-20T02:34:37,226           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,227           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,227           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,228           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,229           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,229           If you don't want 'syntheseus.tests' to be distributed and are
2023-12-20T02:34:37,230           already explicitly excluding 'syntheseus.tests' via
2023-12-20T02:34:37,230           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,231           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,231           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,232           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,233           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,234           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,235                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,235                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,236                 directory, all directories are treated like packages.
2023-12-20T02:34:37,236           ********************************************************************************

2023-12-20T02:34:37,237   !!
2023-12-20T02:34:37,238     check.warn(importable)
2023-12-20T02:34:37,238   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.interface' is absent from the `packages` configuration.
2023-12-20T02:34:37,239   !!

2023-12-20T02:34:37,240           ********************************************************************************
2023-12-20T02:34:37,240           ############################
2023-12-20T02:34:37,241           # Package would be ignored #
2023-12-20T02:34:37,241           ############################
2023-12-20T02:34:37,242           Python recognizes 'syntheseus.tests.interface' as an importable package[^1],
2023-12-20T02:34:37,242           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,243           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,244           package, please make sure that 'syntheseus.tests.interface' is explicitly added
2023-12-20T02:34:37,244           to the `packages` configuration field.

2023-12-20T02:34:37,245           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,246           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,246           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,248           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,249           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,250           If you don't want 'syntheseus.tests.interface' to be distributed and are
2023-12-20T02:34:37,250           already explicitly excluding 'syntheseus.tests.interface' via
2023-12-20T02:34:37,251           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,251           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,252           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,253           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,254           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,256           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,256                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,256                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,257                 directory, all directories are treated like packages.
2023-12-20T02:34:37,257           ********************************************************************************

2023-12-20T02:34:37,258   !!
2023-12-20T02:34:37,259     check.warn(importable)
2023-12-20T02:34:37,259   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction' is absent from the `packages` configuration.
2023-12-20T02:34:37,259   !!

2023-12-20T02:34:37,260           ********************************************************************************
2023-12-20T02:34:37,261           ############################
2023-12-20T02:34:37,261           # Package would be ignored #
2023-12-20T02:34:37,262           ############################
2023-12-20T02:34:37,262           Python recognizes 'syntheseus.tests.reaction_prediction' as an importable package[^1],
2023-12-20T02:34:37,263           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,264           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,264           package, please make sure that 'syntheseus.tests.reaction_prediction' is explicitly added
2023-12-20T02:34:37,265           to the `packages` configuration field.

2023-12-20T02:34:37,266           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,266           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,267           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,268           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,269           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,270           If you don't want 'syntheseus.tests.reaction_prediction' to be distributed and are
2023-12-20T02:34:37,270           already explicitly excluding 'syntheseus.tests.reaction_prediction' via
2023-12-20T02:34:37,271           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,271           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,272           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,273           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,274           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,276           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,276                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,277                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,277                 directory, all directories are treated like packages.
2023-12-20T02:34:37,278           ********************************************************************************

2023-12-20T02:34:37,279   !!
2023-12-20T02:34:37,279     check.warn(importable)
2023-12-20T02:34:37,280   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction.chem' is absent from the `packages` configuration.
2023-12-20T02:34:37,280   !!

2023-12-20T02:34:37,281           ********************************************************************************
2023-12-20T02:34:37,282           ############################
2023-12-20T02:34:37,283           # Package would be ignored #
2023-12-20T02:34:37,283           ############################
2023-12-20T02:34:37,284           Python recognizes 'syntheseus.tests.reaction_prediction.chem' as an importable package[^1],
2023-12-20T02:34:37,284           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,285           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,285           package, please make sure that 'syntheseus.tests.reaction_prediction.chem' is explicitly added
2023-12-20T02:34:37,286           to the `packages` configuration field.

2023-12-20T02:34:37,287           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,287           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,288           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,289           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,290           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,291           If you don't want 'syntheseus.tests.reaction_prediction.chem' to be distributed and are
2023-12-20T02:34:37,291           already explicitly excluding 'syntheseus.tests.reaction_prediction.chem' via
2023-12-20T02:34:37,292           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,292           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,293           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,294           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,295           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,297           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,297                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,298                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,298                 directory, all directories are treated like packages.
2023-12-20T02:34:37,299           ********************************************************************************

2023-12-20T02:34:37,300   !!
2023-12-20T02:34:37,300     check.warn(importable)
2023-12-20T02:34:37,301   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction.cli' is absent from the `packages` configuration.
2023-12-20T02:34:37,301   !!

2023-12-20T02:34:37,302           ********************************************************************************
2023-12-20T02:34:37,303           ############################
2023-12-20T02:34:37,304           # Package would be ignored #
2023-12-20T02:34:37,304           ############################
2023-12-20T02:34:37,305           Python recognizes 'syntheseus.tests.reaction_prediction.cli' as an importable package[^1],
2023-12-20T02:34:37,305           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,306           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,307           package, please make sure that 'syntheseus.tests.reaction_prediction.cli' is explicitly added
2023-12-20T02:34:37,307           to the `packages` configuration field.

2023-12-20T02:34:37,309           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,309           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,310           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,311           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,312           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,313           If you don't want 'syntheseus.tests.reaction_prediction.cli' to be distributed and are
2023-12-20T02:34:37,314           already explicitly excluding 'syntheseus.tests.reaction_prediction.cli' via
2023-12-20T02:34:37,314           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,315           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,315           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,316           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,317           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,319           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,319                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,319                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,320                 directory, all directories are treated like packages.
2023-12-20T02:34:37,320           ********************************************************************************

2023-12-20T02:34:37,322   !!
2023-12-20T02:34:37,322     check.warn(importable)
2023-12-20T02:34:37,322   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction.data' is absent from the `packages` configuration.
2023-12-20T02:34:37,323   !!

2023-12-20T02:34:37,324           ********************************************************************************
2023-12-20T02:34:37,325           ############################
2023-12-20T02:34:37,325           # Package would be ignored #
2023-12-20T02:34:37,326           ############################
2023-12-20T02:34:37,326           Python recognizes 'syntheseus.tests.reaction_prediction.data' as an importable package[^1],
2023-12-20T02:34:37,327           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,328           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,328           package, please make sure that 'syntheseus.tests.reaction_prediction.data' is explicitly added
2023-12-20T02:34:37,329           to the `packages` configuration field.

2023-12-20T02:34:37,330           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,331           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,331           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,333           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,334           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,335           If you don't want 'syntheseus.tests.reaction_prediction.data' to be distributed and are
2023-12-20T02:34:37,336           already explicitly excluding 'syntheseus.tests.reaction_prediction.data' via
2023-12-20T02:34:37,336           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,337           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,337           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,338           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,339           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,341           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,341                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,342                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,343                 directory, all directories are treated like packages.
2023-12-20T02:34:37,343           ********************************************************************************

2023-12-20T02:34:37,344   !!
2023-12-20T02:34:37,345     check.warn(importable)
2023-12-20T02:34:37,345   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction.inference' is absent from the `packages` configuration.
2023-12-20T02:34:37,346   !!

2023-12-20T02:34:37,347           ********************************************************************************
2023-12-20T02:34:37,347           ############################
2023-12-20T02:34:37,348           # Package would be ignored #
2023-12-20T02:34:37,348           ############################
2023-12-20T02:34:37,349           Python recognizes 'syntheseus.tests.reaction_prediction.inference' as an importable package[^1],
2023-12-20T02:34:37,349           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,350           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,351           package, please make sure that 'syntheseus.tests.reaction_prediction.inference' is explicitly added
2023-12-20T02:34:37,351           to the `packages` configuration field.

2023-12-20T02:34:37,352           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,353           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,353           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,354           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,356           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,357           If you don't want 'syntheseus.tests.reaction_prediction.inference' to be distributed and are
2023-12-20T02:34:37,357           already explicitly excluding 'syntheseus.tests.reaction_prediction.inference' via
2023-12-20T02:34:37,358           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,358           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,359           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,360           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,361           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,363           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,364                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,364                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,365                 directory, all directories are treated like packages.
2023-12-20T02:34:37,366           ********************************************************************************

2023-12-20T02:34:37,367   !!
2023-12-20T02:34:37,367     check.warn(importable)
2023-12-20T02:34:37,368   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction.utils' is absent from the `packages` configuration.
2023-12-20T02:34:37,369   !!

2023-12-20T02:34:37,370           ********************************************************************************
2023-12-20T02:34:37,371           ############################
2023-12-20T02:34:37,371           # Package would be ignored #
2023-12-20T02:34:37,372           ############################
2023-12-20T02:34:37,373           Python recognizes 'syntheseus.tests.reaction_prediction.utils' as an importable package[^1],
2023-12-20T02:34:37,373           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,375           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,375           package, please make sure that 'syntheseus.tests.reaction_prediction.utils' is explicitly added
2023-12-20T02:34:37,375           to the `packages` configuration field.

2023-12-20T02:34:37,376           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,377           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,377           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,378           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,379           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,380           If you don't want 'syntheseus.tests.reaction_prediction.utils' to be distributed and are
2023-12-20T02:34:37,380           already explicitly excluding 'syntheseus.tests.reaction_prediction.utils' via
2023-12-20T02:34:37,381           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,381           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,382           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,383           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,384           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,385           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,386                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,386                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,386                 directory, all directories are treated like packages.
2023-12-20T02:34:37,387           ********************************************************************************

2023-12-20T02:34:37,388   !!
2023-12-20T02:34:37,389     check.warn(importable)
2023-12-20T02:34:37,389   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search' is absent from the `packages` configuration.
2023-12-20T02:34:37,390   !!

2023-12-20T02:34:37,391           ********************************************************************************
2023-12-20T02:34:37,391           ############################
2023-12-20T02:34:37,392           # Package would be ignored #
2023-12-20T02:34:37,393           ############################
2023-12-20T02:34:37,393           Python recognizes 'syntheseus.tests.search' as an importable package[^1],
2023-12-20T02:34:37,394           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,395           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,395           package, please make sure that 'syntheseus.tests.search' is explicitly added
2023-12-20T02:34:37,396           to the `packages` configuration field.

2023-12-20T02:34:37,397           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,398           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,398           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,399           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,401           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,402           If you don't want 'syntheseus.tests.search' to be distributed and are
2023-12-20T02:34:37,403           already explicitly excluding 'syntheseus.tests.search' via
2023-12-20T02:34:37,403           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,404           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,405           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,406           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,406           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,408           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,408                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,409                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,409                 directory, all directories are treated like packages.
2023-12-20T02:34:37,409           ********************************************************************************

2023-12-20T02:34:37,410   !!
2023-12-20T02:34:37,411     check.warn(importable)
2023-12-20T02:34:37,411   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search.algorithms' is absent from the `packages` configuration.
2023-12-20T02:34:37,412   !!

2023-12-20T02:34:37,413           ********************************************************************************
2023-12-20T02:34:37,413           ############################
2023-12-20T02:34:37,413           # Package would be ignored #
2023-12-20T02:34:37,414           ############################
2023-12-20T02:34:37,414           Python recognizes 'syntheseus.tests.search.algorithms' as an importable package[^1],
2023-12-20T02:34:37,415           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,416           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,416           package, please make sure that 'syntheseus.tests.search.algorithms' is explicitly added
2023-12-20T02:34:37,417           to the `packages` configuration field.

2023-12-20T02:34:37,418           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,418           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,419           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,420           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,421           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,422           If you don't want 'syntheseus.tests.search.algorithms' to be distributed and are
2023-12-20T02:34:37,423           already explicitly excluding 'syntheseus.tests.search.algorithms' via
2023-12-20T02:34:37,423           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,424           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,424           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,425           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,426           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,428           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,428                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,429                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,429                 directory, all directories are treated like packages.
2023-12-20T02:34:37,430           ********************************************************************************

2023-12-20T02:34:37,431   !!
2023-12-20T02:34:37,432     check.warn(importable)
2023-12-20T02:34:37,432   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search.analysis' is absent from the `packages` configuration.
2023-12-20T02:34:37,433   !!

2023-12-20T02:34:37,434           ********************************************************************************
2023-12-20T02:34:37,434           ############################
2023-12-20T02:34:37,435           # Package would be ignored #
2023-12-20T02:34:37,435           ############################
2023-12-20T02:34:37,435           Python recognizes 'syntheseus.tests.search.analysis' as an importable package[^1],
2023-12-20T02:34:37,436           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,437           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,437           package, please make sure that 'syntheseus.tests.search.analysis' is explicitly added
2023-12-20T02:34:37,437           to the `packages` configuration field.

2023-12-20T02:34:37,438           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,439           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,439           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,440           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,441           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,442           If you don't want 'syntheseus.tests.search.analysis' to be distributed and are
2023-12-20T02:34:37,443           already explicitly excluding 'syntheseus.tests.search.analysis' via
2023-12-20T02:34:37,443           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,444           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,444           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,445           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,446           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,448           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,448                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,449                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,449                 directory, all directories are treated like packages.
2023-12-20T02:34:37,450           ********************************************************************************

2023-12-20T02:34:37,451   !!
2023-12-20T02:34:37,451     check.warn(importable)
2023-12-20T02:34:37,452   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search.graph' is absent from the `packages` configuration.
2023-12-20T02:34:37,452   !!

2023-12-20T02:34:37,453           ********************************************************************************
2023-12-20T02:34:37,454           ############################
2023-12-20T02:34:37,454           # Package would be ignored #
2023-12-20T02:34:37,455           ############################
2023-12-20T02:34:37,455           Python recognizes 'syntheseus.tests.search.graph' as an importable package[^1],
2023-12-20T02:34:37,456           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,457           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,458           package, please make sure that 'syntheseus.tests.search.graph' is explicitly added
2023-12-20T02:34:37,458           to the `packages` configuration field.

2023-12-20T02:34:37,459           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,460           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,460           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,462           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,463           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,464           If you don't want 'syntheseus.tests.search.graph' to be distributed and are
2023-12-20T02:34:37,464           already explicitly excluding 'syntheseus.tests.search.graph' via
2023-12-20T02:34:37,465           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,465           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,465           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,466           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,467           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,468           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,469                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,469                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,470                 directory, all directories are treated like packages.
2023-12-20T02:34:37,470           ********************************************************************************

2023-12-20T02:34:37,471   !!
2023-12-20T02:34:37,471     check.warn(importable)
2023-12-20T02:34:37,472   /tmp/pip-build-env-qicxgr68/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search.node_evaluation' is absent from the `packages` configuration.
2023-12-20T02:34:37,472   !!

2023-12-20T02:34:37,473           ********************************************************************************
2023-12-20T02:34:37,474           ############################
2023-12-20T02:34:37,474           # Package would be ignored #
2023-12-20T02:34:37,475           ############################
2023-12-20T02:34:37,475           Python recognizes 'syntheseus.tests.search.node_evaluation' as an importable package[^1],
2023-12-20T02:34:37,476           but it is absent from setuptools' `packages` configuration.

2023-12-20T02:34:37,477           This leads to an ambiguous overall configuration. If you want to distribute this
2023-12-20T02:34:37,477           package, please make sure that 'syntheseus.tests.search.node_evaluation' is explicitly added
2023-12-20T02:34:37,478           to the `packages` configuration field.

2023-12-20T02:34:37,479           Alternatively, you can also rely on setuptools' discovery methods
2023-12-20T02:34:37,479           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2023-12-20T02:34:37,480           instead of `find_packages(...)`/`find:`).

2023-12-20T02:34:37,481           You can read more about "package discovery" on setuptools documentation page:

2023-12-20T02:34:37,482           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2023-12-20T02:34:37,483           If you don't want 'syntheseus.tests.search.node_evaluation' to be distributed and are
2023-12-20T02:34:37,484           already explicitly excluding 'syntheseus.tests.search.node_evaluation' via
2023-12-20T02:34:37,484           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2023-12-20T02:34:37,485           you can try to use `exclude_package_data`, or `include-package-data=False` in
2023-12-20T02:34:37,486           combination with a more fine grained `package-data` configuration.

2023-12-20T02:34:37,487           You can read more about "package data files" on setuptools documentation page:

2023-12-20T02:34:37,488           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2023-12-20T02:34:37,489           [^1]: For Python, any directory (with suitable naming) can be imported,
2023-12-20T02:34:37,490                 even if it does not contain any `.py` files.
2023-12-20T02:34:37,491                 On the other hand, currently there is no concept of package data
2023-12-20T02:34:37,491                 directory, all directories are treated like packages.
2023-12-20T02:34:37,492           ********************************************************************************

2023-12-20T02:34:37,493   !!
2023-12-20T02:34:37,493     check.warn(importable)
2023-12-20T02:34:37,494   copying syntheseus/py.typed -> build/lib/syntheseus
2023-12-20T02:34:37,494   creating build/lib/syntheseus/tests
2023-12-20T02:34:37,495   copying syntheseus/tests/__init__.py -> build/lib/syntheseus/tests
2023-12-20T02:34:37,495   creating build/lib/syntheseus/tests/interface
2023-12-20T02:34:37,496   copying syntheseus/tests/interface/__init__.py -> build/lib/syntheseus/tests/interface
2023-12-20T02:34:37,496   copying syntheseus/tests/interface/test_bag.py -> build/lib/syntheseus/tests/interface
2023-12-20T02:34:37,497   copying syntheseus/tests/interface/test_models.py -> build/lib/syntheseus/tests/interface
2023-12-20T02:34:37,497   copying syntheseus/tests/interface/test_molecule.py -> build/lib/syntheseus/tests/interface
2023-12-20T02:34:37,498   creating build/lib/syntheseus/tests/reaction_prediction
2023-12-20T02:34:37,498   copying syntheseus/tests/reaction_prediction/__init__.py -> build/lib/syntheseus/tests/reaction_prediction
2023-12-20T02:34:37,499   creating build/lib/syntheseus/tests/reaction_prediction/chem
2023-12-20T02:34:37,499   copying syntheseus/tests/reaction_prediction/chem/__init__.py -> build/lib/syntheseus/tests/reaction_prediction/chem
2023-12-20T02:34:37,500   copying syntheseus/tests/reaction_prediction/chem/test_utils.py -> build/lib/syntheseus/tests/reaction_prediction/chem
2023-12-20T02:34:37,500   creating build/lib/syntheseus/tests/reaction_prediction/cli
2023-12-20T02:34:37,501   copying syntheseus/tests/reaction_prediction/cli/__init__.py -> build/lib/syntheseus/tests/reaction_prediction/cli
2023-12-20T02:34:37,501   copying syntheseus/tests/reaction_prediction/cli/test_eval.py -> build/lib/syntheseus/tests/reaction_prediction/cli
2023-12-20T02:34:37,502   creating build/lib/syntheseus/tests/reaction_prediction/data
2023-12-20T02:34:37,503   copying syntheseus/tests/reaction_prediction/data/__init__.py -> build/lib/syntheseus/tests/reaction_prediction/data
2023-12-20T02:34:37,503   copying syntheseus/tests/reaction_prediction/data/test_dataset.py -> build/lib/syntheseus/tests/reaction_prediction/data
2023-12-20T02:34:37,504   creating build/lib/syntheseus/tests/reaction_prediction/inference
2023-12-20T02:34:37,504   copying syntheseus/tests/reaction_prediction/inference/__init__.py -> build/lib/syntheseus/tests/reaction_prediction/inference
2023-12-20T02:34:37,505   copying syntheseus/tests/reaction_prediction/inference/test_models.py -> build/lib/syntheseus/tests/reaction_prediction/inference
2023-12-20T02:34:37,506   creating build/lib/syntheseus/tests/reaction_prediction/utils
2023-12-20T02:34:37,506   copying syntheseus/tests/reaction_prediction/utils/__init__.py -> build/lib/syntheseus/tests/reaction_prediction/utils
2023-12-20T02:34:37,507   copying syntheseus/tests/reaction_prediction/utils/test_misc.py -> build/lib/syntheseus/tests/reaction_prediction/utils
2023-12-20T02:34:37,507   copying syntheseus/tests/reaction_prediction/utils/test_syntheseus_wrapper.py -> build/lib/syntheseus/tests/reaction_prediction/utils
2023-12-20T02:34:37,508   creating build/lib/syntheseus/tests/search
2023-12-20T02:34:37,509   copying syntheseus/tests/search/__init__.py -> build/lib/syntheseus/tests/search
2023-12-20T02:34:37,509   copying syntheseus/tests/search/conftest.py -> build/lib/syntheseus/tests/search
2023-12-20T02:34:37,510   copying syntheseus/tests/search/test_chem.py -> build/lib/syntheseus/tests/search
2023-12-20T02:34:37,510   copying syntheseus/tests/search/test_mol_inventory.py -> build/lib/syntheseus/tests/search
2023-12-20T02:34:37,511   copying syntheseus/tests/search/test_reaction_models.py -> build/lib/syntheseus/tests/search
2023-12-20T02:34:37,511   copying syntheseus/tests/search/test_visualization.py -> build/lib/syntheseus/tests/search
2023-12-20T02:34:37,512   creating build/lib/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,513   copying syntheseus/tests/search/algorithms/__init__.py -> build/lib/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,513   copying syntheseus/tests/search/algorithms/test_base.py -> build/lib/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,513   copying syntheseus/tests/search/algorithms/test_best_first.py -> build/lib/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,514   copying syntheseus/tests/search/algorithms/test_breadth_first.py -> build/lib/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,514   copying syntheseus/tests/search/algorithms/test_mcts.py -> build/lib/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,515   copying syntheseus/tests/search/algorithms/test_pdvn.py -> build/lib/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,516   creating build/lib/syntheseus/tests/search/analysis
2023-12-20T02:34:37,516   copying syntheseus/tests/search/analysis/__init__.py -> build/lib/syntheseus/tests/search/analysis
2023-12-20T02:34:37,516   copying syntheseus/tests/search/analysis/conftest.py -> build/lib/syntheseus/tests/search/analysis
2023-12-20T02:34:37,517   copying syntheseus/tests/search/analysis/test_diversity.py -> build/lib/syntheseus/tests/search/analysis
2023-12-20T02:34:37,517   copying syntheseus/tests/search/analysis/test_route_extraction.py -> build/lib/syntheseus/tests/search/analysis
2023-12-20T02:34:37,518   copying syntheseus/tests/search/analysis/test_solution_time.py -> build/lib/syntheseus/tests/search/analysis
2023-12-20T02:34:37,518   creating build/lib/syntheseus/tests/search/graph
2023-12-20T02:34:37,519   copying syntheseus/tests/search/graph/__init__.py -> build/lib/syntheseus/tests/search/graph
2023-12-20T02:34:37,519   copying syntheseus/tests/search/graph/test_andor.py -> build/lib/syntheseus/tests/search/graph
2023-12-20T02:34:37,520   copying syntheseus/tests/search/graph/test_base.py -> build/lib/syntheseus/tests/search/graph
2023-12-20T02:34:37,520   copying syntheseus/tests/search/graph/test_message_passing.py -> build/lib/syntheseus/tests/search/graph
2023-12-20T02:34:37,521   copying syntheseus/tests/search/graph/test_molset.py -> build/lib/syntheseus/tests/search/graph
2023-12-20T02:34:37,522   copying syntheseus/tests/search/graph/test_route.py -> build/lib/syntheseus/tests/search/graph
2023-12-20T02:34:37,522   copying syntheseus/tests/search/graph/test_standardization.py -> build/lib/syntheseus/tests/search/graph
2023-12-20T02:34:37,523   creating build/lib/syntheseus/tests/search/node_evaluation
2023-12-20T02:34:37,523   copying syntheseus/tests/search/node_evaluation/__init__.py -> build/lib/syntheseus/tests/search/node_evaluation
2023-12-20T02:34:37,524   copying syntheseus/tests/search/node_evaluation/test_common.py -> build/lib/syntheseus/tests/search/node_evaluation
2023-12-20T02:34:37,525   copying syntheseus/cli/search_config.yml -> build/lib/syntheseus/cli
2023-12-20T02:34:37,526   creating build/lib/syntheseus/reaction_prediction/environment_gln
2023-12-20T02:34:37,526   copying syntheseus/reaction_prediction/environment_gln/Dockerfile -> build/lib/syntheseus/reaction_prediction/environment_gln
2023-12-20T02:34:37,527   copying syntheseus/reaction_prediction/environment_gln/environment.yml -> build/lib/syntheseus/reaction_prediction/environment_gln
2023-12-20T02:34:37,527   copying syntheseus/reaction_prediction/inference/default_checkpoint_links.yml -> build/lib/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,528   installing to build/bdist.linux-armv7l/wheel
2023-12-20T02:34:37,528   running install
2023-12-20T02:34:37,529   running install_lib
2023-12-20T02:34:37,530   creating build/bdist.linux-armv7l
2023-12-20T02:34:37,530   creating build/bdist.linux-armv7l/wheel
2023-12-20T02:34:37,531   creating build/bdist.linux-armv7l/wheel/syntheseus
2023-12-20T02:34:37,531   creating build/bdist.linux-armv7l/wheel/syntheseus/tests
2023-12-20T02:34:37,532   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/interface
2023-12-20T02:34:37,532   copying build/lib/syntheseus/tests/interface/test_molecule.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface
2023-12-20T02:34:37,533   copying build/lib/syntheseus/tests/interface/test_models.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface
2023-12-20T02:34:37,533   copying build/lib/syntheseus/tests/interface/test_bag.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface
2023-12-20T02:34:37,534   copying build/lib/syntheseus/tests/interface/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface
2023-12-20T02:34:37,534   copying build/lib/syntheseus/tests/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests
2023-12-20T02:34:37,535   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction
2023-12-20T02:34:37,535   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/utils
2023-12-20T02:34:37,536   copying build/lib/syntheseus/tests/reaction_prediction/utils/test_syntheseus_wrapper.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/utils
2023-12-20T02:34:37,536   copying build/lib/syntheseus/tests/reaction_prediction/utils/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/utils
2023-12-20T02:34:37,537   copying build/lib/syntheseus/tests/reaction_prediction/utils/test_misc.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/utils
2023-12-20T02:34:37,537   copying build/lib/syntheseus/tests/reaction_prediction/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction
2023-12-20T02:34:37,538   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/cli
2023-12-20T02:34:37,538   copying build/lib/syntheseus/tests/reaction_prediction/cli/test_eval.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/cli
2023-12-20T02:34:37,539   copying build/lib/syntheseus/tests/reaction_prediction/cli/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/cli
2023-12-20T02:34:37,539   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/inference
2023-12-20T02:34:37,539   copying build/lib/syntheseus/tests/reaction_prediction/inference/test_models.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/inference
2023-12-20T02:34:37,540   copying build/lib/syntheseus/tests/reaction_prediction/inference/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/inference
2023-12-20T02:34:37,540   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/data
2023-12-20T02:34:37,541   copying build/lib/syntheseus/tests/reaction_prediction/data/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/data
2023-12-20T02:34:37,542   copying build/lib/syntheseus/tests/reaction_prediction/data/test_dataset.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/data
2023-12-20T02:34:37,542   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/chem
2023-12-20T02:34:37,543   copying build/lib/syntheseus/tests/reaction_prediction/chem/test_utils.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/chem
2023-12-20T02:34:37,543   copying build/lib/syntheseus/tests/reaction_prediction/chem/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/chem
2023-12-20T02:34:37,544   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search
2023-12-20T02:34:37,544   copying build/lib/syntheseus/tests/search/test_visualization.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search
2023-12-20T02:34:37,545   copying build/lib/syntheseus/tests/search/test_reaction_models.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search
2023-12-20T02:34:37,545   copying build/lib/syntheseus/tests/search/test_mol_inventory.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search
2023-12-20T02:34:37,546   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph
2023-12-20T02:34:37,547   copying build/lib/syntheseus/tests/search/graph/test_andor.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph
2023-12-20T02:34:37,547   copying build/lib/syntheseus/tests/search/graph/test_standardization.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph
2023-12-20T02:34:37,548   copying build/lib/syntheseus/tests/search/graph/test_base.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph
2023-12-20T02:34:37,548   copying build/lib/syntheseus/tests/search/graph/test_route.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph
2023-12-20T02:34:37,548   copying build/lib/syntheseus/tests/search/graph/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph
2023-12-20T02:34:37,549   copying build/lib/syntheseus/tests/search/graph/test_molset.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph
2023-12-20T02:34:37,549   copying build/lib/syntheseus/tests/search/graph/test_message_passing.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph
2023-12-20T02:34:37,550   copying build/lib/syntheseus/tests/search/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search
2023-12-20T02:34:37,550   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis
2023-12-20T02:34:37,551   copying build/lib/syntheseus/tests/search/analysis/test_solution_time.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis
2023-12-20T02:34:37,551   copying build/lib/syntheseus/tests/search/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis
2023-12-20T02:34:37,552   copying build/lib/syntheseus/tests/search/analysis/test_route_extraction.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis
2023-12-20T02:34:37,552   copying build/lib/syntheseus/tests/search/analysis/conftest.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis
2023-12-20T02:34:37,553   copying build/lib/syntheseus/tests/search/analysis/test_diversity.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis
2023-12-20T02:34:37,553   copying build/lib/syntheseus/tests/search/conftest.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search
2023-12-20T02:34:37,554   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,554   copying build/lib/syntheseus/tests/search/algorithms/test_best_first.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,555   copying build/lib/syntheseus/tests/search/algorithms/test_pdvn.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,555   copying build/lib/syntheseus/tests/search/algorithms/test_mcts.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,556   copying build/lib/syntheseus/tests/search/algorithms/test_base.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,556   copying build/lib/syntheseus/tests/search/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,557   copying build/lib/syntheseus/tests/search/algorithms/test_breadth_first.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms
2023-12-20T02:34:37,558   copying build/lib/syntheseus/tests/search/test_chem.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search
2023-12-20T02:34:37,558   creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search/node_evaluation
2023-12-20T02:34:37,559   copying build/lib/syntheseus/tests/search/node_evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/node_evaluation
2023-12-20T02:34:37,559   copying build/lib/syntheseus/tests/search/node_evaluation/test_common.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/node_evaluation
2023-12-20T02:34:37,560   creating build/bdist.linux-armv7l/wheel/syntheseus/interface
2023-12-20T02:34:37,561   copying build/lib/syntheseus/interface/molecule.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface
2023-12-20T02:34:37,561   copying build/lib/syntheseus/interface/models.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface
2023-12-20T02:34:37,562   copying build/lib/syntheseus/interface/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface
2023-12-20T02:34:37,562   copying build/lib/syntheseus/interface/bag.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface
2023-12-20T02:34:37,562   copying build/lib/syntheseus/interface/typed_dict.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface
2023-12-20T02:34:37,563   copying build/lib/syntheseus/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus
2023-12-20T02:34:37,563   creating build/bdist.linux-armv7l/wheel/syntheseus/cli
2023-12-20T02:34:37,564   copying build/lib/syntheseus/cli/search.py -> build/bdist.linux-armv7l/wheel/syntheseus/cli
2023-12-20T02:34:37,564   copying build/lib/syntheseus/cli/search_config.yml -> build/bdist.linux-armv7l/wheel/syntheseus/cli
2023-12-20T02:34:37,565   copying build/lib/syntheseus/cli/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/cli
2023-12-20T02:34:37,565   copying build/lib/syntheseus/cli/main.py -> build/bdist.linux-armv7l/wheel/syntheseus/cli
2023-12-20T02:34:37,566   copying build/lib/syntheseus/cli/eval_single_step.py -> build/bdist.linux-armv7l/wheel/syntheseus/cli
2023-12-20T02:34:37,566   copying build/lib/syntheseus/py.typed -> build/bdist.linux-armv7l/wheel/syntheseus
2023-12-20T02:34:37,567   creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction
2023-12-20T02:34:37,567   creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,567   copying build/lib/syntheseus/reaction_prediction/utils/parallel.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,568   copying build/lib/syntheseus/reaction_prediction/utils/model_loading.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,570   copying build/lib/syntheseus/reaction_prediction/utils/downloading.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,572   copying build/lib/syntheseus/reaction_prediction/utils/inference.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,574   copying build/lib/syntheseus/reaction_prediction/utils/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,576   copying build/lib/syntheseus/reaction_prediction/utils/metrics.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,578   copying build/lib/syntheseus/reaction_prediction/utils/misc.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,580   copying build/lib/syntheseus/reaction_prediction/utils/syntheseus_wrapper.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,582   copying build/lib/syntheseus/reaction_prediction/utils/config.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils
2023-12-20T02:34:37,584   copying build/lib/syntheseus/reaction_prediction/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction
2023-12-20T02:34:37,586   creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/cli
2023-12-20T02:34:37,588   copying build/lib/syntheseus/reaction_prediction/cli/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/cli
2023-12-20T02:34:37,590   creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,591   copying build/lib/syntheseus/reaction_prediction/inference/chemformer.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,594   copying build/lib/syntheseus/reaction_prediction/inference/root_aligned.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,597   copying build/lib/syntheseus/reaction_prediction/inference/local_retro.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,599   copying build/lib/syntheseus/reaction_prediction/inference/mhnreact.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,602   copying build/lib/syntheseus/reaction_prediction/inference/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,604   copying build/lib/syntheseus/reaction_prediction/inference/gln.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,605   copying build/lib/syntheseus/reaction_prediction/inference/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,607   copying build/lib/syntheseus/reaction_prediction/inference/default_checkpoint_links.yml -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,609   copying build/lib/syntheseus/reaction_prediction/inference/retro_knn.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,611   copying build/lib/syntheseus/reaction_prediction/inference/config.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,613   copying build/lib/syntheseus/reaction_prediction/inference/megan.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference
2023-12-20T02:34:37,616   creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/environment_gln
2023-12-20T02:34:37,617   copying build/lib/syntheseus/reaction_prediction/environment_gln/Dockerfile -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/environment_gln
2023-12-20T02:34:37,619   copying build/lib/syntheseus/reaction_prediction/environment_gln/environment.yml -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/environment_gln
2023-12-20T02:34:37,622   creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/models
2023-12-20T02:34:37,622   copying build/lib/syntheseus/reaction_prediction/models/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/models
2023-12-20T02:34:37,624   copying build/lib/syntheseus/reaction_prediction/models/retro_knn.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/models
2023-12-20T02:34:37,627   creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/data
2023-12-20T02:34:37,628   copying build/lib/syntheseus/reaction_prediction/data/reaction_sample.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/data
2023-12-20T02:34:37,630   copying build/lib/syntheseus/reaction_prediction/data/dataset.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/data
2023-12-20T02:34:37,633   copying build/lib/syntheseus/reaction_prediction/data/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/data
2023-12-20T02:34:37,635   creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/chem
2023-12-20T02:34:37,636   copying build/lib/syntheseus/reaction_prediction/chem/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/chem
2023-12-20T02:34:37,638   copying build/lib/syntheseus/reaction_prediction/chem/utils.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/chem
2023-12-20T02:34:37,640   creating build/bdist.linux-armv7l/wheel/syntheseus/search
2023-12-20T02:34:37,641   copying build/lib/syntheseus/search/chem.py -> build/bdist.linux-armv7l/wheel/syntheseus/search
2023-12-20T02:34:37,644   copying build/lib/syntheseus/search/visualization.py -> build/bdist.linux-armv7l/wheel/syntheseus/search
2023-12-20T02:34:37,646   copying build/lib/syntheseus/search/mol_inventory.py -> build/bdist.linux-armv7l/wheel/syntheseus/search
2023-12-20T02:34:37,649   creating build/bdist.linux-armv7l/wheel/syntheseus/search/reaction_models
2023-12-20T02:34:37,650   copying build/lib/syntheseus/search/reaction_models/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/reaction_models
2023-12-20T02:34:37,652   copying build/lib/syntheseus/search/reaction_models/toy.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/reaction_models
2023-12-20T02:34:37,654   copying build/lib/syntheseus/search/reaction_models/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/reaction_models
2023-12-20T02:34:37,657   creating build/bdist.linux-armv7l/wheel/syntheseus/search/graph
2023-12-20T02:34:37,657   copying build/lib/syntheseus/search/graph/route.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph
2023-12-20T02:34:37,659   copying build/lib/syntheseus/search/graph/and_or.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph
2023-12-20T02:34:37,663   creating build/bdist.linux-armv7l/wheel/syntheseus/search/graph/message_passing
2023-12-20T02:34:37,663   copying build/lib/syntheseus/search/graph/message_passing/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph/message_passing
2023-12-20T02:34:37,665   copying build/lib/syntheseus/search/graph/message_passing/run.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph/message_passing
2023-12-20T02:34:37,668   copying build/lib/syntheseus/search/graph/message_passing/update_functions.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph/message_passing
2023-12-20T02:34:37,670   copying build/lib/syntheseus/search/graph/standardization.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph
2023-12-20T02:34:37,672   copying build/lib/syntheseus/search/graph/node.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph
2023-12-20T02:34:37,674   copying build/lib/syntheseus/search/graph/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph
2023-12-20T02:34:37,675   copying build/lib/syntheseus/search/graph/molset.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph
2023-12-20T02:34:37,678   copying build/lib/syntheseus/search/graph/base_graph.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph
2023-12-20T02:34:37,681   creating build/bdist.linux-armv7l/wheel/syntheseus/search/utils
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2023-12-20T02:34:37,683   copying build/lib/syntheseus/search/utils/misc.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/utils
2023-12-20T02:34:37,685   copying build/lib/syntheseus/search/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search
2023-12-20T02:34:37,687   creating build/bdist.linux-armv7l/wheel/syntheseus/search/analysis
2023-12-20T02:34:37,688   copying build/lib/syntheseus/search/analysis/solution_time.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/analysis
2023-12-20T02:34:37,690   copying build/lib/syntheseus/search/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/analysis
2023-12-20T02:34:37,692   copying build/lib/syntheseus/search/analysis/diversity.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/analysis
2023-12-20T02:34:37,694   copying build/lib/syntheseus/search/analysis/route_extraction.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/analysis
2023-12-20T02:34:37,697   creating build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms
2023-12-20T02:34:37,699   creating build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/best_first
2023-12-20T02:34:37,700   copying build/lib/syntheseus/search/algorithms/best_first/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/best_first
2023-12-20T02:34:37,702   copying build/lib/syntheseus/search/algorithms/best_first/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/best_first
2023-12-20T02:34:37,704   copying build/lib/syntheseus/search/algorithms/best_first/retro_star.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/best_first
2023-12-20T02:34:37,707   copying build/lib/syntheseus/search/algorithms/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms
2023-12-20T02:34:37,709   copying build/lib/syntheseus/search/algorithms/mixins.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms
2023-12-20T02:34:37,711   copying build/lib/syntheseus/search/algorithms/pdvn.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms
2023-12-20T02:34:37,714   copying build/lib/syntheseus/search/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms
2023-12-20T02:34:37,716   copying build/lib/syntheseus/search/algorithms/breadth_first.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms
2023-12-20T02:34:37,718   creating build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/mcts
2023-12-20T02:34:37,719   copying build/lib/syntheseus/search/algorithms/mcts/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/mcts
2023-12-20T02:34:37,722   copying build/lib/syntheseus/search/algorithms/mcts/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/mcts
2023-12-20T02:34:37,723   copying build/lib/syntheseus/search/algorithms/mcts/molset.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/mcts
2023-12-20T02:34:37,726   creating build/bdist.linux-armv7l/wheel/syntheseus/search/node_evaluation
2023-12-20T02:34:37,727   copying build/lib/syntheseus/search/node_evaluation/common.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/node_evaluation
2023-12-20T02:34:37,729   copying build/lib/syntheseus/search/node_evaluation/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/node_evaluation
2023-12-20T02:34:37,731   copying build/lib/syntheseus/search/node_evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/node_evaluation
2023-12-20T02:34:37,733   running install_egg_info
2023-12-20T02:34:37,738   Copying syntheseus.egg-info to build/bdist.linux-armv7l/wheel/syntheseus-0.3.0-py3.11.egg-info
2023-12-20T02:34:37,750   running install_scripts
2023-12-20T02:34:37,770   creating build/bdist.linux-armv7l/wheel/syntheseus-0.3.0.dist-info/WHEEL
2023-12-20T02:34:37,773   creating '/tmp/pip-wheel-ugkd58ho/.tmp-4xl2k7gg/syntheseus-0.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2023-12-20T02:34:37,775   adding 'syntheseus/__init__.py'
2023-12-20T02:34:37,777   adding 'syntheseus/py.typed'
2023-12-20T02:34:37,778   adding 'syntheseus/cli/__init__.py'
2023-12-20T02:34:37,781   adding 'syntheseus/cli/eval_single_step.py'
2023-12-20T02:34:37,783   adding 'syntheseus/cli/main.py'
2023-12-20T02:34:37,785   adding 'syntheseus/cli/search.py'
2023-12-20T02:34:37,787   adding 'syntheseus/cli/search_config.yml'
2023-12-20T02:34:37,789   adding 'syntheseus/interface/__init__.py'
2023-12-20T02:34:37,790   adding 'syntheseus/interface/bag.py'
2023-12-20T02:34:37,792   adding 'syntheseus/interface/models.py'
2023-12-20T02:34:37,793   adding 'syntheseus/interface/molecule.py'
2023-12-20T02:34:37,794   adding 'syntheseus/interface/typed_dict.py'
2023-12-20T02:34:37,796   adding 'syntheseus/reaction_prediction/__init__.py'
2023-12-20T02:34:37,798   adding 'syntheseus/reaction_prediction/chem/__init__.py'
2023-12-20T02:34:37,799   adding 'syntheseus/reaction_prediction/chem/utils.py'
2023-12-20T02:34:37,801   adding 'syntheseus/reaction_prediction/cli/__init__.py'
2023-12-20T02:34:37,803   adding 'syntheseus/reaction_prediction/data/__init__.py'
2023-12-20T02:34:37,805   adding 'syntheseus/reaction_prediction/data/dataset.py'
2023-12-20T02:34:37,806   adding 'syntheseus/reaction_prediction/data/reaction_sample.py'
2023-12-20T02:34:37,808   adding 'syntheseus/reaction_prediction/environment_gln/Dockerfile'
2023-12-20T02:34:37,809   adding 'syntheseus/reaction_prediction/environment_gln/environment.yml'
2023-12-20T02:34:37,811   adding 'syntheseus/reaction_prediction/inference/__init__.py'
2023-12-20T02:34:37,813   adding 'syntheseus/reaction_prediction/inference/base.py'
2023-12-20T02:34:37,816   adding 'syntheseus/reaction_prediction/inference/chemformer.py'
2023-12-20T02:34:37,818   adding 'syntheseus/reaction_prediction/inference/config.py'
2023-12-20T02:34:37,819   adding 'syntheseus/reaction_prediction/inference/default_checkpoint_links.yml'
2023-12-20T02:34:37,820   adding 'syntheseus/reaction_prediction/inference/gln.py'
2023-12-20T02:34:37,822   adding 'syntheseus/reaction_prediction/inference/local_retro.py'
2023-12-20T02:34:37,823   adding 'syntheseus/reaction_prediction/inference/megan.py'
2023-12-20T02:34:37,825   adding 'syntheseus/reaction_prediction/inference/mhnreact.py'
2023-12-20T02:34:37,826   adding 'syntheseus/reaction_prediction/inference/retro_knn.py'
2023-12-20T02:34:37,828   adding 'syntheseus/reaction_prediction/inference/root_aligned.py'
2023-12-20T02:34:37,830   adding 'syntheseus/reaction_prediction/models/__init__.py'
2023-12-20T02:34:37,831   adding 'syntheseus/reaction_prediction/models/retro_knn.py'
2023-12-20T02:34:37,833   adding 'syntheseus/reaction_prediction/utils/__init__.py'
2023-12-20T02:34:37,834   adding 'syntheseus/reaction_prediction/utils/config.py'
2023-12-20T02:34:37,835   adding 'syntheseus/reaction_prediction/utils/downloading.py'
2023-12-20T02:34:37,837   adding 'syntheseus/reaction_prediction/utils/inference.py'
2023-12-20T02:34:37,838   adding 'syntheseus/reaction_prediction/utils/metrics.py'
2023-12-20T02:34:37,840   adding 'syntheseus/reaction_prediction/utils/misc.py'
2023-12-20T02:34:37,841   adding 'syntheseus/reaction_prediction/utils/model_loading.py'
2023-12-20T02:34:37,842   adding 'syntheseus/reaction_prediction/utils/parallel.py'
2023-12-20T02:34:37,843   adding 'syntheseus/reaction_prediction/utils/syntheseus_wrapper.py'
2023-12-20T02:34:37,845   adding 'syntheseus/search/__init__.py'
2023-12-20T02:34:37,846   adding 'syntheseus/search/chem.py'
2023-12-20T02:34:37,848   adding 'syntheseus/search/mol_inventory.py'
2023-12-20T02:34:37,849   adding 'syntheseus/search/visualization.py'
2023-12-20T02:34:37,851   adding 'syntheseus/search/algorithms/__init__.py'
2023-12-20T02:34:37,853   adding 'syntheseus/search/algorithms/base.py'
2023-12-20T02:34:37,854   adding 'syntheseus/search/algorithms/breadth_first.py'
2023-12-20T02:34:37,856   adding 'syntheseus/search/algorithms/mixins.py'
2023-12-20T02:34:37,858   adding 'syntheseus/search/algorithms/pdvn.py'
2023-12-20T02:34:37,860   adding 'syntheseus/search/algorithms/best_first/__init__.py'
2023-12-20T02:34:37,862   adding 'syntheseus/search/algorithms/best_first/base.py'
2023-12-20T02:34:37,863   adding 'syntheseus/search/algorithms/best_first/retro_star.py'
2023-12-20T02:34:37,865   adding 'syntheseus/search/algorithms/mcts/__init__.py'
2023-12-20T02:34:37,868   adding 'syntheseus/search/algorithms/mcts/base.py'
2023-12-20T02:34:37,869   adding 'syntheseus/search/algorithms/mcts/molset.py'
2023-12-20T02:34:37,871   adding 'syntheseus/search/analysis/__init__.py'
2023-12-20T02:34:37,872   adding 'syntheseus/search/analysis/diversity.py'
2023-12-20T02:34:37,874   adding 'syntheseus/search/analysis/route_extraction.py'
2023-12-20T02:34:37,876   adding 'syntheseus/search/analysis/solution_time.py'
2023-12-20T02:34:37,877   adding 'syntheseus/search/graph/__init__.py'
2023-12-20T02:34:37,879   adding 'syntheseus/search/graph/and_or.py'
2023-12-20T02:34:37,881   adding 'syntheseus/search/graph/base_graph.py'
2023-12-20T02:34:37,882   adding 'syntheseus/search/graph/molset.py'
2023-12-20T02:34:37,884   adding 'syntheseus/search/graph/node.py'
2023-12-20T02:34:37,885   adding 'syntheseus/search/graph/route.py'
2023-12-20T02:34:37,887   adding 'syntheseus/search/graph/standardization.py'
2023-12-20T02:34:37,889   adding 'syntheseus/search/graph/message_passing/__init__.py'
2023-12-20T02:34:37,890   adding 'syntheseus/search/graph/message_passing/run.py'
2023-12-20T02:34:37,892   adding 'syntheseus/search/graph/message_passing/update_functions.py'
2023-12-20T02:34:37,893   adding 'syntheseus/search/node_evaluation/__init__.py'
2023-12-20T02:34:37,895   adding 'syntheseus/search/node_evaluation/base.py'
2023-12-20T02:34:37,896   adding 'syntheseus/search/node_evaluation/common.py'
2023-12-20T02:34:37,898   adding 'syntheseus/search/reaction_models/__init__.py'
2023-12-20T02:34:37,899   adding 'syntheseus/search/reaction_models/base.py'
2023-12-20T02:34:37,901   adding 'syntheseus/search/reaction_models/toy.py'
2023-12-20T02:34:37,902   adding 'syntheseus/search/utils/__init__.py'
2023-12-20T02:34:37,903   adding 'syntheseus/search/utils/misc.py'
2023-12-20T02:34:37,905   adding 'syntheseus/tests/__init__.py'
2023-12-20T02:34:37,906   adding 'syntheseus/tests/interface/__init__.py'
2023-12-20T02:34:37,907   adding 'syntheseus/tests/interface/test_bag.py'
2023-12-20T02:34:37,909   adding 'syntheseus/tests/interface/test_models.py'
2023-12-20T02:34:37,910   adding 'syntheseus/tests/interface/test_molecule.py'
2023-12-20T02:34:37,911   adding 'syntheseus/tests/reaction_prediction/__init__.py'
2023-12-20T02:34:37,913   adding 'syntheseus/tests/reaction_prediction/chem/__init__.py'
2023-12-20T02:34:37,914   adding 'syntheseus/tests/reaction_prediction/chem/test_utils.py'
2023-12-20T02:34:37,916   adding 'syntheseus/tests/reaction_prediction/cli/__init__.py'
2023-12-20T02:34:37,917   adding 'syntheseus/tests/reaction_prediction/cli/test_eval.py'
2023-12-20T02:34:37,919   adding 'syntheseus/tests/reaction_prediction/data/__init__.py'
2023-12-20T02:34:37,920   adding 'syntheseus/tests/reaction_prediction/data/test_dataset.py'
2023-12-20T02:34:37,921   adding 'syntheseus/tests/reaction_prediction/inference/__init__.py'
2023-12-20T02:34:37,923   adding 'syntheseus/tests/reaction_prediction/inference/test_models.py'
2023-12-20T02:34:37,924   adding 'syntheseus/tests/reaction_prediction/utils/__init__.py'
2023-12-20T02:34:37,925   adding 'syntheseus/tests/reaction_prediction/utils/test_misc.py'
2023-12-20T02:34:37,927   adding 'syntheseus/tests/reaction_prediction/utils/test_syntheseus_wrapper.py'
2023-12-20T02:34:37,928   adding 'syntheseus/tests/search/__init__.py'
2023-12-20T02:34:37,931   adding 'syntheseus/tests/search/conftest.py'
2023-12-20T02:34:37,932   adding 'syntheseus/tests/search/test_chem.py'
2023-12-20T02:34:37,934   adding 'syntheseus/tests/search/test_mol_inventory.py'
2023-12-20T02:34:37,935   adding 'syntheseus/tests/search/test_reaction_models.py'
2023-12-20T02:34:37,936   adding 'syntheseus/tests/search/test_visualization.py'
2023-12-20T02:34:37,938   adding 'syntheseus/tests/search/algorithms/__init__.py'
2023-12-20T02:34:37,941   adding 'syntheseus/tests/search/algorithms/test_base.py'
2023-12-20T02:34:37,943   adding 'syntheseus/tests/search/algorithms/test_best_first.py'
2023-12-20T02:34:37,945   adding 'syntheseus/tests/search/algorithms/test_breadth_first.py'
2023-12-20T02:34:37,947   adding 'syntheseus/tests/search/algorithms/test_mcts.py'
2023-12-20T02:34:37,949   adding 'syntheseus/tests/search/algorithms/test_pdvn.py'
2023-12-20T02:34:37,950   adding 'syntheseus/tests/search/analysis/__init__.py'
2023-12-20T02:34:37,952   adding 'syntheseus/tests/search/analysis/conftest.py'
2023-12-20T02:34:37,953   adding 'syntheseus/tests/search/analysis/test_diversity.py'
2023-12-20T02:34:37,955   adding 'syntheseus/tests/search/analysis/test_route_extraction.py'
2023-12-20T02:34:37,956   adding 'syntheseus/tests/search/analysis/test_solution_time.py'
2023-12-20T02:34:37,958   adding 'syntheseus/tests/search/graph/__init__.py'
2023-12-20T02:34:37,959   adding 'syntheseus/tests/search/graph/test_andor.py'
2023-12-20T02:34:37,961   adding 'syntheseus/tests/search/graph/test_base.py'
2023-12-20T02:34:37,962   adding 'syntheseus/tests/search/graph/test_message_passing.py'
2023-12-20T02:34:37,964   adding 'syntheseus/tests/search/graph/test_molset.py'
2023-12-20T02:34:37,965   adding 'syntheseus/tests/search/graph/test_route.py'
2023-12-20T02:34:37,966   adding 'syntheseus/tests/search/graph/test_standardization.py'
2023-12-20T02:34:37,968   adding 'syntheseus/tests/search/node_evaluation/__init__.py'
2023-12-20T02:34:37,969   adding 'syntheseus/tests/search/node_evaluation/test_common.py'
2023-12-20T02:34:37,971   adding 'syntheseus-0.3.0.dist-info/LICENSE'
2023-12-20T02:34:37,973   adding 'syntheseus-0.3.0.dist-info/METADATA'
2023-12-20T02:34:37,974   adding 'syntheseus-0.3.0.dist-info/WHEEL'
2023-12-20T02:34:37,975   adding 'syntheseus-0.3.0.dist-info/entry_points.txt'
2023-12-20T02:34:37,976   adding 'syntheseus-0.3.0.dist-info/top_level.txt'
2023-12-20T02:34:37,978   adding 'syntheseus-0.3.0.dist-info/RECORD'
2023-12-20T02:34:37,983   removing build/bdist.linux-armv7l/wheel
2023-12-20T02:34:38,151   Building wheel for syntheseus (pyproject.toml): finished with status 'done'
2023-12-20T02:34:38,158   Created wheel for syntheseus: filename=syntheseus-0.3.0-py3-none-any.whl size=157056 sha256=c0c2da6149b6a4eb5d4d573ba649a047aefbaf78a1842a7ab2c7a2978d5e9541
2023-12-20T02:34:38,160   Stored in directory: /tmp/pip-ephem-wheel-cache-w8gxqyd9/wheels/18/91/55/6c576bb77c656efeadc065b16486900145bdea01b8a6be56d1
2023-12-20T02:34:38,176 Successfully built syntheseus
2023-12-20T02:34:38,183 Removed build tracker: '/tmp/pip-build-tracker-e6vkjao0'