2024-01-06T14:59:16,253 Created temporary directory: /tmp/pip-build-tracker-ihtakjri 2024-01-06T14:59:16,254 Initialized build tracking at /tmp/pip-build-tracker-ihtakjri 2024-01-06T14:59:16,255 Created build tracker: /tmp/pip-build-tracker-ihtakjri 2024-01-06T14:59:16,255 Entered build tracker: /tmp/pip-build-tracker-ihtakjri 2024-01-06T14:59:16,255 Created temporary directory: /tmp/pip-wheel-vw204f2_ 2024-01-06T14:59:16,259 Created temporary directory: /tmp/pip-ephem-wheel-cache-e6hl2mi_ 2024-01-06T14:59:16,283 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-06T14:59:16,287 2 location(s) to search for versions of mdeepfri: 2024-01-06T14:59:16,287 * https://pypi.org/simple/mdeepfri/ 2024-01-06T14:59:16,287 * https://www.piwheels.org/simple/mdeepfri/ 2024-01-06T14:59:16,288 Fetching project page and analyzing links: https://pypi.org/simple/mdeepfri/ 2024-01-06T14:59:16,288 Getting page https://pypi.org/simple/mdeepfri/ 2024-01-06T14:59:16,289 Found index url https://pypi.org/simple/ 2024-01-06T14:59:16,340 Fetched page https://pypi.org/simple/mdeepfri/ as application/vnd.pypi.simple.v1+json 2024-01-06T14:59:16,346 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/a3/fd/4877bbce87318b9a8460a9496c1c81c41c8f2f380bbcb4f35a8bbc067864/mDeepFRI-1.1.1-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,346 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/41/ef/0b90c0d9d3c63d3a2e4a6805f38860b1f8e8b3f9a7c726e5b61ed37af6e5/mDeepFRI-1.1.1-cp310-cp310-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,347 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/95/57/c2a9b7d79d005d589be434bf1281a3c53490fac61a7e09ebcbac7b1b1541/mDeepFRI-1.1.1-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,347 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/37/51/5122ab5363467128ecf10fed6370185528dbc19e864dff1d4b37c85796e6/mDeepFRI-1.1.1-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,347 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/ae/de/dbb8bba94ca57c649d7a5268a2c35a47acc479a2bc6d8fe5eed7900b8a74/mDeepFRI-1.1.1-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,347 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/28/02/fb52e1d76f992cd72d92e605198ed528a6ac8b652c15ab293684a69f5bf9/mDeepFRI-1.1.1-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,347 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/f4/2d/b2f0c93c1cd67ce4e8a92679f5251722ffff8c2ec28bb703841d0da2def5/mDeepFRI-1.1.1-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,348 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/c3/c5/3c861491f779b8b928bec2b4313926d7b96d8d8e4aa45f71539f7869807b/mDeepFRI-1.1.1-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,348 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/a0/ab/e6bee7ee6b72eb3f17030415d5837d1e9ef2358850ce93eda56f2c7307d9/mDeepFRI-1.1.1-cp312-cp312-macosx_10_9_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,348 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/17/5b/baca3ed739f3453da7c95ebd1811b2624b6fcbce85804e370b0a902591d0/mDeepFRI-1.1.1-cp312-cp312-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,348 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/da/3c/f72ae43af1a026626212c9d2cf2ca2528ca8dbf73ecb6d33514a90060afa/mDeepFRI-1.1.1-cp312-cp312-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,348 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/15/89/f45d097055f09e3d84cd5303e8204d96292e4ef8daae8939d23a97586ab3/mDeepFRI-1.1.1-cp312-cp312-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,349 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/b2/0e/61b780210acdc220e9854f2d8233e5cf82ee44d2f7325ae1649879efc9b2/mDeepFRI-1.1.1-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,349 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/39/1a/bf9de6975a5ad3e71811c074b34d294aa9ea53e75aa4ddf9e4b9a9cf4fa6/mDeepFRI-1.1.1-cp38-cp38-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,349 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/af/8e/c89432be54f8bf8a5d228fae929c3435db0ae0e59b03abd5b3c383b0a165/mDeepFRI-1.1.1-cp38-cp38-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,349 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/9a/f6/7f585f0770545b1ec54a88425cf10ea7aeb79a5276c2ebc8d798996a16c1/mDeepFRI-1.1.1-cp38-cp38-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,349 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/67/af/f09b6454c566da9314d44255e7e1fadc3baab65b47938de2dad4d5e2e2d5/mDeepFRI-1.1.1-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,350 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/5f/73/878ad2ba3c783271833cf8dcae60f17fb6047169c2263840d4a59bddacf8/mDeepFRI-1.1.1-cp39-cp39-macosx_11_0_arm64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,350 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/48/da/1697fb02251607125887f9df0f972389c25a4df59d8e432f92447eba5ae4/mDeepFRI-1.1.1-cp39-cp39-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,350 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/ad/f9/5683ab8603da5aa6a6309f48e9eae0606be73792d4b0ee41a7a42eec5467/mDeepFRI-1.1.1-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,350 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/92/2a/9fac5796caf1b26230ffc3da78e0c74d32107dd7b46241330aba6c838177/mDeepFRI-1.1.1-pp38-pypy38_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,351 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/46/f0/4d2f6c91877b73a8b0b2b5060dcf8be1b55f05dbdcb0a0bb3b31ca50d06a/mDeepFRI-1.1.1-pp38-pypy38_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,351 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/9e/e4/83d60f7ca5ec8eb7eaeb76cf12e6a01dc2c73de6b90897105eb9ec900a15/mDeepFRI-1.1.1-pp38-pypy38_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,351 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/5d/17/6cb3cf0e992808dfce6821c2d081b35fdd1a37c502fca4187a8e8ffd531e/mDeepFRI-1.1.1-pp39-pypy39_pp73-macosx_10_9_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,351 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/76/06/a58e6335d29e02b052c1df43400b8c6eab2c79b2eed26a7dc40fb90b4951/mDeepFRI-1.1.1-pp39-pypy39_pp73-manylinux_2_17_aarch64.manylinux2014_aarch64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,351 Skipping link: No binaries permitted for mdeepfri: https://files.pythonhosted.org/packages/0d/6c/875ff6cb87ad70e61e68e2f943ad063e484821cd12a29223a4a69c79f648/mDeepFRI-1.1.1-pp39-pypy39_pp73-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,352 Found link https://files.pythonhosted.org/packages/3e/4c/5cf31758b163d70d5a16672a43b2b70edf5b6c3a98a29a9e73f90c1ef045/mDeepFRI-1.1.1.tar.gz (from https://pypi.org/simple/mdeepfri/) (requires-python:>=3.6), version: 1.1.1 2024-01-06T14:59:16,353 Fetching project page and analyzing links: https://www.piwheels.org/simple/mdeepfri/ 2024-01-06T14:59:16,353 Getting page https://www.piwheels.org/simple/mdeepfri/ 2024-01-06T14:59:16,354 Found index url https://www.piwheels.org/simple/ 2024-01-06T14:59:16,422 Fetched page https://www.piwheels.org/simple/mdeepfri/ as text/html 2024-01-06T14:59:16,425 Skipping link: No binaries permitted for mdeepfri: https://www.piwheels.org/simple/mdeepfri/mDeepFRI-1.1.1-cp311-cp311-linux_armv6l.whl#sha256=8183fb84b09a0d1f6262890a4d9ba961ad21d2b2f08e265806678cfc6f76753e (from https://www.piwheels.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,425 Skipping link: No binaries permitted for mdeepfri: https://www.piwheels.org/simple/mdeepfri/mDeepFRI-1.1.1-cp311-cp311-linux_armv7l.whl#sha256=8183fb84b09a0d1f6262890a4d9ba961ad21d2b2f08e265806678cfc6f76753e (from https://www.piwheels.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,425 Skipping link: No binaries permitted for mdeepfri: https://www.piwheels.org/simple/mdeepfri/mDeepFRI-1.1.1-cp37-cp37m-linux_armv6l.whl#sha256=8b5679dc81e06283c16333882e71695e516776a5f13ec8fa2e19f6b13cdc026d (from https://www.piwheels.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,425 Skipping link: No binaries permitted for mdeepfri: https://www.piwheels.org/simple/mdeepfri/mDeepFRI-1.1.1-cp37-cp37m-linux_armv7l.whl#sha256=8b5679dc81e06283c16333882e71695e516776a5f13ec8fa2e19f6b13cdc026d (from https://www.piwheels.org/simple/mdeepfri/) (requires-python:>=3.6) 2024-01-06T14:59:16,426 Skipping link: not a file: https://www.piwheels.org/simple/mdeepfri/ 2024-01-06T14:59:16,426 Skipping link: not a file: https://pypi.org/simple/mdeepfri/ 2024-01-06T14:59:16,443 Given no hashes to check 1 links for project 'mdeepfri': discarding no candidates 2024-01-06T14:59:16,460 Collecting mdeepfri==1.1.1 2024-01-06T14:59:16,462 Created temporary directory: /tmp/pip-unpack-1n6zsy8b 2024-01-06T14:59:16,504 Downloading mDeepFRI-1.1.1.tar.gz (29 kB) 2024-01-06T14:59:16,561 Added mdeepfri==1.1.1 from https://files.pythonhosted.org/packages/3e/4c/5cf31758b163d70d5a16672a43b2b70edf5b6c3a98a29a9e73f90c1ef045/mDeepFRI-1.1.1.tar.gz to build tracker '/tmp/pip-build-tracker-ihtakjri' 2024-01-06T14:59:16,567 Created temporary directory: /tmp/pip-build-env-4uetwu44 2024-01-06T14:59:16,577 Installing build dependencies: started 2024-01-06T14:59:16,578 Running command pip subprocess to install build dependencies 2024-01-06T14:59:17,733 Using pip 23.3.1 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2024-01-06T14:59:18,278 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-06T14:59:19,700 Collecting setuptools 2024-01-06T14:59:19,717 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.0.3-py3-none-any.whl (819 kB) 2024-01-06T14:59:20,895 Collecting numpy 2024-01-06T14:59:20,913 Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.3-cp39-cp39-linux_armv7l.whl (19.4 MB) 2024-01-06T14:59:22,743 Collecting cython 2024-01-06T14:59:22,764 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.7-cp39-cp39-linux_armv7l.whl (10.7 MB) 2024-01-06T14:59:23,379 Collecting requests 2024-01-06T14:59:23,395 Using cached https://www.piwheels.org/simple/requests/requests-2.31.0-py3-none-any.whl (62 kB) 2024-01-06T14:59:23,973 Collecting charset-normalizer<4,>=2 (from requests) 2024-01-06T14:59:23,988 Using cached https://www.piwheels.org/simple/charset-normalizer/charset_normalizer-3.3.2-py3-none-any.whl (48 kB) 2024-01-06T14:59:24,098 Collecting idna<4,>=2.5 (from requests) 2024-01-06T14:59:24,114 Using cached https://www.piwheels.org/simple/idna/idna-3.6-py3-none-any.whl (61 kB) 2024-01-06T14:59:24,428 Collecting urllib3<3,>=1.21.1 (from requests) 2024-01-06T14:59:24,445 Using cached https://www.piwheels.org/simple/urllib3/urllib3-2.1.0-py3-none-any.whl (104 kB) 2024-01-06T14:59:24,598 Collecting certifi>=2017.4.17 (from requests) 2024-01-06T14:59:24,614 Using cached https://www.piwheels.org/simple/certifi/certifi-2023.11.17-py3-none-any.whl (162 kB) 2024-01-06T14:59:26,500 Installing collected packages: urllib3, setuptools, numpy, idna, cython, charset-normalizer, certifi, requests 2024-01-06T14:59:36,475 Creating /tmp/pip-build-env-4uetwu44/overlay/bin 2024-01-06T14:59:36,477 changing mode of /tmp/pip-build-env-4uetwu44/overlay/bin/f2py to 755 2024-01-06T14:59:40,526 changing mode of /tmp/pip-build-env-4uetwu44/overlay/bin/cygdb to 755 2024-01-06T14:59:40,529 changing mode of /tmp/pip-build-env-4uetwu44/overlay/bin/cython to 755 2024-01-06T14:59:40,531 changing mode of /tmp/pip-build-env-4uetwu44/overlay/bin/cythonize to 755 2024-01-06T14:59:40,675 changing mode of /tmp/pip-build-env-4uetwu44/overlay/bin/normalizer to 755 2024-01-06T14:59:40,899 ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. 2024-01-06T14:59:40,900 scipy 1.8.1 requires numpy<1.25.0,>=1.17.3, but you have numpy 1.26.3 which is incompatible. 2024-01-06T14:59:40,900 conan 2.0.10 requires urllib3<1.27,>=1.26.6, but you have urllib3 2.1.0 which is incompatible. 2024-01-06T14:59:40,901 Successfully installed certifi-2023.11.17 charset-normalizer-3.3.2 cython-3.0.7 idna-3.6 numpy-1.26.3 requests-2.31.0 setuptools-69.0.3 urllib3-2.1.0 2024-01-06T14:59:41,093 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-06T14:59:41,093 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-06T14:59:41,558 Installing build dependencies: finished with status 'done' 2024-01-06T14:59:41,563 Getting requirements to build wheel: started 2024-01-06T14:59:41,564 Running command Getting requirements to build wheel 2024-01-06T14:59:42,883 Getting requirements to build wheel: finished with status 'done' 2024-01-06T14:59:42,903 Installing backend dependencies: started 2024-01-06T14:59:42,904 Running command pip subprocess to install backend dependencies 2024-01-06T14:59:44,116 Using pip 23.3.1 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2024-01-06T14:59:44,678 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-06T14:59:45,024 Collecting wheel 2024-01-06T14:59:45,040 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-01-06T14:59:46,694 Installing collected packages: wheel 2024-01-06T14:59:46,915 Creating /tmp/pip-build-env-4uetwu44/normal/bin 2024-01-06T14:59:46,917 changing mode of /tmp/pip-build-env-4uetwu44/normal/bin/wheel to 755 2024-01-06T14:59:46,929 Successfully installed wheel-0.42.0 2024-01-06T14:59:47,114 [notice] A new release of pip is available: 23.3.1 -> 23.3.2 2024-01-06T14:59:47,114 [notice] To update, run: python3 -m pip install --upgrade pip 2024-01-06T14:59:47,333 Installing backend dependencies: finished with status 'done' 2024-01-06T14:59:47,335 Created temporary directory: /tmp/pip-modern-metadata-2n8_007w 2024-01-06T14:59:47,338 Preparing metadata (pyproject.toml): started 2024-01-06T14:59:47,339 Running command Preparing metadata (pyproject.toml) 2024-01-06T14:59:48,513 running dist_info 2024-01-06T14:59:48,528 creating /tmp/pip-modern-metadata-2n8_007w/mDeepFRI.egg-info 2024-01-06T14:59:48,534 writing /tmp/pip-modern-metadata-2n8_007w/mDeepFRI.egg-info/PKG-INFO 2024-01-06T14:59:48,539 writing dependency_links to /tmp/pip-modern-metadata-2n8_007w/mDeepFRI.egg-info/dependency_links.txt 2024-01-06T14:59:48,540 writing entry points to /tmp/pip-modern-metadata-2n8_007w/mDeepFRI.egg-info/entry_points.txt 2024-01-06T14:59:48,542 writing requirements to /tmp/pip-modern-metadata-2n8_007w/mDeepFRI.egg-info/requires.txt 2024-01-06T14:59:48,543 writing top-level names to /tmp/pip-modern-metadata-2n8_007w/mDeepFRI.egg-info/top_level.txt 2024-01-06T14:59:48,544 writing manifest file '/tmp/pip-modern-metadata-2n8_007w/mDeepFRI.egg-info/SOURCES.txt' 2024-01-06T14:59:48,571 reading manifest file '/tmp/pip-modern-metadata-2n8_007w/mDeepFRI.egg-info/SOURCES.txt' 2024-01-06T14:59:48,573 adding license file 'LICENSE' 2024-01-06T14:59:48,575 writing manifest file '/tmp/pip-modern-metadata-2n8_007w/mDeepFRI.egg-info/SOURCES.txt' 2024-01-06T14:59:48,576 creating '/tmp/pip-modern-metadata-2n8_007w/mDeepFRI-1.1.1.dist-info' 2024-01-06T14:59:48,794 Preparing metadata (pyproject.toml): finished with status 'done' 2024-01-06T14:59:48,800 Source in /tmp/pip-wheel-vw204f2_/mdeepfri_efacbc87e528476e870bef214d88531f has version 1.1.1, which satisfies requirement mdeepfri==1.1.1 from https://files.pythonhosted.org/packages/3e/4c/5cf31758b163d70d5a16672a43b2b70edf5b6c3a98a29a9e73f90c1ef045/mDeepFRI-1.1.1.tar.gz 2024-01-06T14:59:48,801 Removed mdeepfri==1.1.1 from https://files.pythonhosted.org/packages/3e/4c/5cf31758b163d70d5a16672a43b2b70edf5b6c3a98a29a9e73f90c1ef045/mDeepFRI-1.1.1.tar.gz from build tracker '/tmp/pip-build-tracker-ihtakjri' 2024-01-06T14:59:48,808 Created temporary directory: /tmp/pip-unpack-82hxr6f3 2024-01-06T14:59:48,809 Created temporary directory: /tmp/pip-unpack-8ab7iopv 2024-01-06T14:59:48,819 Building wheels for collected packages: mdeepfri 2024-01-06T14:59:48,823 Created temporary directory: /tmp/pip-wheel-aswykixb 2024-01-06T14:59:48,823 Destination directory: /tmp/pip-wheel-aswykixb 2024-01-06T14:59:48,825 Building wheel for mdeepfri (pyproject.toml): started 2024-01-06T14:59:48,826 Running command Building wheel for mdeepfri (pyproject.toml) 2024-01-06T14:59:50,049 running bdist_wheel 2024-01-06T14:59:50,081 running build 2024-01-06T14:59:50,082 running build_py 2024-01-06T14:59:50,091 creating build 2024-01-06T14:59:50,092 creating build/lib.linux-armv7l-cpython-39 2024-01-06T14:59:50,093 creating build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,094 copying mDeepFRI/alignment.py -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,097 copying mDeepFRI/pipeline.py -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,099 copying mDeepFRI/utils.py -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,102 copying mDeepFRI/pdb.py -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,104 copying mDeepFRI/cli.py -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,106 copying mDeepFRI/__init__.py -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,107 copying mDeepFRI/database.py -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,109 copying mDeepFRI/mmseqs.py -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,112 copying mDeepFRI/bio_utils.py -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,114 running egg_info 2024-01-06T14:59:50,121 writing mDeepFRI.egg-info/PKG-INFO 2024-01-06T14:59:50,126 writing dependency_links to mDeepFRI.egg-info/dependency_links.txt 2024-01-06T14:59:50,128 writing entry points to mDeepFRI.egg-info/entry_points.txt 2024-01-06T14:59:50,130 writing requirements to mDeepFRI.egg-info/requires.txt 2024-01-06T14:59:50,131 writing top-level names to mDeepFRI.egg-info/top_level.txt 2024-01-06T14:59:50,142 reading manifest file 'mDeepFRI.egg-info/SOURCES.txt' 2024-01-06T14:59:50,144 adding license file 'LICENSE' 2024-01-06T14:59:50,147 writing manifest file 'mDeepFRI.egg-info/SOURCES.txt' 2024-01-06T14:59:50,150 copying mDeepFRI/alignment_utils.pyx -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,152 copying mDeepFRI/predict.pyx -> build/lib.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:50,154 running build_ext 2024-01-06T14:59:52,791 Compiling mDeepFRI/predict.pyx because it changed. 2024-01-06T14:59:52,791 Compiling mDeepFRI/alignment_utils.pyx because it changed. 2024-01-06T14:59:52,791 [1/2] Cythonizing mDeepFRI/alignment_utils.pyx 2024-01-06T14:59:52,791 [2/2] Cythonizing mDeepFRI/predict.pyx 2024-01-06T14:59:52,797 building 'mDeepFRI.predict' extension 2024-01-06T14:59:52,798 creating build/temp.linux-armv7l-cpython-39 2024-01-06T14:59:52,799 creating build/temp.linux-armv7l-cpython-39/mDeepFRI 2024-01-06T14:59:52,800 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-4uetwu44/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c mDeepFRI/predict.cpp -o build/temp.linux-armv7l-cpython-39/mDeepFRI/predict.o -std=c++17 -O3 2024-01-06T14:59:53,117 In file included from /tmp/pip-build-env-4uetwu44/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-01-06T14:59:53,117 from /tmp/pip-build-env-4uetwu44/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-01-06T14:59:53,118 from /tmp/pip-build-env-4uetwu44/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-01-06T14:59:53,118 from mDeepFRI/predict.cpp:1225: 2024-01-06T14:59:53,118 /tmp/pip-build-env-4uetwu44/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-01-06T14:59:53,118 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-01-06T14:59:53,118 | ^~~~~~~ 2024-01-06T15:00:11,837 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/mDeepFRI/predict.o -L/usr/lib -lstdc++ -o build/lib.linux-armv7l-cpython-39/mDeepFRI/predict.cpython-39-arm-linux-gnueabihf.so 2024-01-06T15:00:12,070 building 'mDeepFRI.alignment_utils' extension 2024-01-06T15:00:12,071 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-4uetwu44/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c mDeepFRI/alignment_utils.cpp -o build/temp.linux-armv7l-cpython-39/mDeepFRI/alignment_utils.o -std=c++17 -O3 2024-01-06T15:00:15,460 arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/mDeepFRI/alignment_utils.o -L/usr/lib -lstdc++ -o build/lib.linux-armv7l-cpython-39/mDeepFRI/alignment_utils.cpython-39-arm-linux-gnueabihf.so 2024-01-06T15:00:18,684 installing to build/bdist.linux-armv7l/wheel 2024-01-06T15:00:18,684 running install 2024-01-06T15:00:18,710 running install_lib 2024-01-06T15:00:18,720 creating build/bdist.linux-armv7l 2024-01-06T15:00:18,720 creating build/bdist.linux-armv7l/wheel 2024-01-06T15:00:18,721 copying build/lib.linux-armv7l-cpython-39/foldcomp_bin -> build/bdist.linux-armv7l/wheel 2024-01-06T15:00:18,818 creating build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,819 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/alignment.py -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,822 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/pipeline.py -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,824 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/utils.py -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,826 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/pdb.py -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,828 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/alignment_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,834 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/cli.py -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,836 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/__init__.py -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,838 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/predict.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,853 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/predict.pyx -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,855 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/database.py -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,856 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/mmseqs.py -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,859 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/bio_utils.py -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,861 copying build/lib.linux-armv7l-cpython-39/mDeepFRI/alignment_utils.pyx -> build/bdist.linux-armv7l/wheel/mDeepFRI 2024-01-06T15:00:18,863 running install_egg_info 2024-01-06T15:00:18,873 Copying mDeepFRI.egg-info to build/bdist.linux-armv7l/wheel/mDeepFRI-1.1.1-py3.9.egg-info 2024-01-06T15:00:18,887 running install_scripts 2024-01-06T15:00:18,936 creating build/bdist.linux-armv7l/wheel/mDeepFRI-1.1.1.dist-info/WHEEL 2024-01-06T15:00:18,939 creating '/tmp/pip-wheel-aswykixb/.tmp-6ga_4ps2/mDeepFRI-1.1.1-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-06T15:00:19,974 adding 'foldcomp_bin' 2024-01-06T15:00:20,018 adding 'mDeepFRI/__init__.py' 2024-01-06T15:00:20,019 adding 'mDeepFRI/alignment.py' 2024-01-06T15:00:20,058 adding 'mDeepFRI/alignment_utils.cpython-39-arm-linux-gnueabihf.so' 2024-01-06T15:00:20,061 adding 'mDeepFRI/alignment_utils.pyx' 2024-01-06T15:00:20,064 adding 'mDeepFRI/bio_utils.py' 2024-01-06T15:00:20,065 adding 'mDeepFRI/cli.py' 2024-01-06T15:00:20,067 adding 'mDeepFRI/database.py' 2024-01-06T15:00:20,068 adding 'mDeepFRI/mmseqs.py' 2024-01-06T15:00:20,070 adding 'mDeepFRI/pdb.py' 2024-01-06T15:00:20,071 adding 'mDeepFRI/pipeline.py' 2024-01-06T15:00:20,248 adding 'mDeepFRI/predict.cpython-39-arm-linux-gnueabihf.so' 2024-01-06T15:00:20,255 adding 'mDeepFRI/predict.pyx' 2024-01-06T15:00:20,257 adding 'mDeepFRI/utils.py' 2024-01-06T15:00:20,259 adding 'mDeepFRI-1.1.1.dist-info/LICENSE' 2024-01-06T15:00:20,261 adding 'mDeepFRI-1.1.1.dist-info/METADATA' 2024-01-06T15:00:20,262 adding 'mDeepFRI-1.1.1.dist-info/WHEEL' 2024-01-06T15:00:20,263 adding 'mDeepFRI-1.1.1.dist-info/entry_points.txt' 2024-01-06T15:00:20,264 adding 'mDeepFRI-1.1.1.dist-info/top_level.txt' 2024-01-06T15:00:20,265 adding 'mDeepFRI-1.1.1.dist-info/RECORD' 2024-01-06T15:00:20,289 removing build/bdist.linux-armv7l/wheel 2024-01-06T15:00:20,572 Building wheel for mdeepfri (pyproject.toml): finished with status 'done' 2024-01-06T15:00:20,628 Created wheel for mdeepfri: filename=mDeepFRI-1.1.1-cp39-cp39-linux_armv7l.whl size=2483693 sha256=444b5268e238c10f5dd4da640c199b22d70cd1827e014db8ba16192ae5f87843 2024-01-06T15:00:20,629 Stored in directory: /tmp/pip-ephem-wheel-cache-e6hl2mi_/wheels/db/da/03/ddbbe283cf6e0815faf84309758ab4b292ca3baad5c61fcb63 2024-01-06T15:00:20,642 Successfully built mdeepfri 2024-01-06T15:00:20,704 Removed build tracker: '/tmp/pip-build-tracker-ihtakjri'