2024-01-14T01:33:02,309 Created temporary directory: /tmp/pip-build-tracker-aoap0ojz 2024-01-14T01:33:02,311 Initialized build tracking at /tmp/pip-build-tracker-aoap0ojz 2024-01-14T01:33:02,311 Created build tracker: /tmp/pip-build-tracker-aoap0ojz 2024-01-14T01:33:02,311 Entered build tracker: /tmp/pip-build-tracker-aoap0ojz 2024-01-14T01:33:02,312 Created temporary directory: /tmp/pip-wheel-w5s284kl 2024-01-14T01:33:02,315 Created temporary directory: /tmp/pip-ephem-wheel-cache-l9bap9ri 2024-01-14T01:33:02,337 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-14T01:33:02,341 2 location(s) to search for versions of fibsem: 2024-01-14T01:33:02,341 * https://pypi.org/simple/fibsem/ 2024-01-14T01:33:02,341 * https://www.piwheels.org/simple/fibsem/ 2024-01-14T01:33:02,341 Fetching project page and analyzing links: https://pypi.org/simple/fibsem/ 2024-01-14T01:33:02,342 Getting page https://pypi.org/simple/fibsem/ 2024-01-14T01:33:02,343 Found index url https://pypi.org/simple/ 2024-01-14T01:33:02,553 Fetched page https://pypi.org/simple/fibsem/ as application/vnd.pypi.simple.v1+json 2024-01-14T01:33:02,556 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/4c/cf/0ed2a796e278cf9de3d52e287cc7d8d9892c21c0a00920a9ff30f5033a56/fibsem-0.2.1a0-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,557 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/ad/73/b8cf8db0dba6e191be400b025e534b4f6d7d18c39d86428101720ee58e4e/fibsem-0.2.1a1-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,558 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/d7/30/b93e42954d23659272a1b8ac6f3dd60da6eff0df55fc4d31bb515f6934eb/fibsem-0.2.2a0-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,559 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/c8/8f/4bfbe20bfa2ca615b74ad68a1317c1b61df9a93f5f8c9df9e223c9b20623/fibsem-0.2.2a1-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,559 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/7c/63/681df259de02d04424d8e71530649f0949504d5b31aaf5086651b5804d0c/fibsem-0.2.3a0-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,560 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/36/98/67400e49fe61d7e9e58d04099a516c039d4493a9ce346276a2cb37774dcd/fibsem-0.2.3-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,560 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/39/cc/5b8579067af3dc74509ceaba38d5117cde72f44a85ca8bcc56f5ebee7260/fibsem-0.2.4-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,561 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/43/13/625dba2d4741c02a3e6c970399a725b644b9a058dadb2f5fea9e9420b4e3/fibsem-0.2.5-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,562 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/87/1d/1562b356490f6c485f927c52d4b36e774bd5b9588d7a8da4a3dc9432db01/fibsem-0.3.0a0-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,563 Found link https://files.pythonhosted.org/packages/ad/3e/400c07e0574bbab09f711951db2f6ad3f367a8feff8f6cbafa7af89fd67a/fibsem-0.3.0a0.tar.gz (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9), version: 0.3.0a0 2024-01-14T01:33:02,563 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/df/fb/4bad22a49352a49befdb7d1513163de5d8d1a4cfb0e60fa3ac4c67f20482/fibsem-0.3.0a1-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,564 Found link https://files.pythonhosted.org/packages/4e/58/d870caa49f7754b016226db2b7f0ec101164622fc2e82511e7bae7f95af6/fibsem-0.3.0a1.tar.gz (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9), version: 0.3.0a1 2024-01-14T01:33:02,566 Fetching project page and analyzing links: https://www.piwheels.org/simple/fibsem/ 2024-01-14T01:33:02,566 Getting page https://www.piwheels.org/simple/fibsem/ 2024-01-14T01:33:02,568 Found index url https://www.piwheels.org/simple/ 2024-01-14T01:33:02,721 Fetched page https://www.piwheels.org/simple/fibsem/ as text/html 2024-01-14T01:33:02,723 Skipping link: No binaries permitted for fibsem: https://www.piwheels.org/simple/fibsem/fibsem-0.3.0a0-py3-none-any.whl#sha256=4e29ec9054961edc9242d2cb332c01000bcb0574069ad23261e41ac7f1489a4f (from https://www.piwheels.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-14T01:33:02,723 Skipping link: not a file: https://www.piwheels.org/simple/fibsem/ 2024-01-14T01:33:02,724 Skipping link: not a file: https://pypi.org/simple/fibsem/ 2024-01-14T01:33:02,742 Given no hashes to check 1 links for project 'fibsem': discarding no candidates 2024-01-14T01:33:02,760 Collecting fibsem==0.3.0a1 2024-01-14T01:33:02,762 Created temporary directory: /tmp/pip-unpack-5bakivym 2024-01-14T01:33:03,086 Downloading fibsem-0.3.0a1.tar.gz (8.4 MB) 2024-01-14T01:33:05,308 Added fibsem==0.3.0a1 from https://files.pythonhosted.org/packages/4e/58/d870caa49f7754b016226db2b7f0ec101164622fc2e82511e7bae7f95af6/fibsem-0.3.0a1.tar.gz to build tracker '/tmp/pip-build-tracker-aoap0ojz' 2024-01-14T01:33:05,309 Running setup.py (path:/tmp/pip-wheel-w5s284kl/fibsem_ef902563aa034238b5f8b256536b0da0/setup.py) egg_info for package fibsem 2024-01-14T01:33:05,310 Created temporary directory: /tmp/pip-pip-egg-info-qxl0ped4 2024-01-14T01:33:05,311 Preparing metadata (setup.py): started 2024-01-14T01:33:05,312 Running command python setup.py egg_info 2024-01-14T01:33:06,410 running egg_info 2024-01-14T01:33:06,411 creating /tmp/pip-pip-egg-info-qxl0ped4/fibsem.egg-info 2024-01-14T01:33:06,435 writing /tmp/pip-pip-egg-info-qxl0ped4/fibsem.egg-info/PKG-INFO 2024-01-14T01:33:06,439 writing dependency_links to /tmp/pip-pip-egg-info-qxl0ped4/fibsem.egg-info/dependency_links.txt 2024-01-14T01:33:06,441 writing entry points to /tmp/pip-pip-egg-info-qxl0ped4/fibsem.egg-info/entry_points.txt 2024-01-14T01:33:06,442 writing requirements to /tmp/pip-pip-egg-info-qxl0ped4/fibsem.egg-info/requires.txt 2024-01-14T01:33:06,443 writing top-level names to /tmp/pip-pip-egg-info-qxl0ped4/fibsem.egg-info/top_level.txt 2024-01-14T01:33:06,445 writing manifest file '/tmp/pip-pip-egg-info-qxl0ped4/fibsem.egg-info/SOURCES.txt' 2024-01-14T01:33:06,530 reading manifest file '/tmp/pip-pip-egg-info-qxl0ped4/fibsem.egg-info/SOURCES.txt' 2024-01-14T01:33:06,532 reading manifest template 'MANIFEST.in' 2024-01-14T01:33:06,533 warning: no previously-included files matching '__pycache__' found under directory '*' 2024-01-14T01:33:06,534 warning: no previously-included files matching '*.py[co]' found under directory '*' 2024-01-14T01:33:06,535 warning: no previously-included files matching '*.ui' found under directory '*' 2024-01-14T01:33:06,535 adding license file 'LICENSE' 2024-01-14T01:33:06,539 writing manifest file '/tmp/pip-pip-egg-info-qxl0ped4/fibsem.egg-info/SOURCES.txt' 2024-01-14T01:33:06,645 Preparing metadata (setup.py): finished with status 'done' 2024-01-14T01:33:06,650 Source in /tmp/pip-wheel-w5s284kl/fibsem_ef902563aa034238b5f8b256536b0da0 has version 0.3.0a1, which satisfies requirement fibsem==0.3.0a1 from https://files.pythonhosted.org/packages/4e/58/d870caa49f7754b016226db2b7f0ec101164622fc2e82511e7bae7f95af6/fibsem-0.3.0a1.tar.gz 2024-01-14T01:33:06,651 Removed fibsem==0.3.0a1 from https://files.pythonhosted.org/packages/4e/58/d870caa49f7754b016226db2b7f0ec101164622fc2e82511e7bae7f95af6/fibsem-0.3.0a1.tar.gz from build tracker '/tmp/pip-build-tracker-aoap0ojz' 2024-01-14T01:33:06,657 Created temporary directory: /tmp/pip-unpack-ao68ldcl 2024-01-14T01:33:06,658 Created temporary directory: /tmp/pip-unpack-4ys_dp4o 2024-01-14T01:33:06,686 Building wheels for collected packages: fibsem 2024-01-14T01:33:06,690 Created temporary directory: /tmp/pip-wheel-luw_17cv 2024-01-14T01:33:06,691 Building wheel for fibsem (setup.py): started 2024-01-14T01:33:06,692 Destination directory: /tmp/pip-wheel-luw_17cv 2024-01-14T01:33:06,692 Running command python setup.py bdist_wheel 2024-01-14T01:33:07,770 running bdist_wheel 2024-01-14T01:33:07,865 running build 2024-01-14T01:33:07,866 running build_py 2024-01-14T01:33:07,894 creating build 2024-01-14T01:33:07,895 creating build/lib 2024-01-14T01:33:07,896 creating build/lib/fibsem 2024-01-14T01:33:07,898 copying fibsem/microscope.py -> build/lib/fibsem 2024-01-14T01:33:07,904 copying fibsem/gis.py -> build/lib/fibsem 2024-01-14T01:33:07,906 copying fibsem/patterning.py -> build/lib/fibsem 2024-01-14T01:33:07,909 copying fibsem/acquire.py -> build/lib/fibsem 2024-01-14T01:33:07,912 copying fibsem/validation.py -> build/lib/fibsem 2024-01-14T01:33:07,914 copying fibsem/__init__.py -> build/lib/fibsem 2024-01-14T01:33:07,916 copying fibsem/alignment2.py -> build/lib/fibsem 2024-01-14T01:33:07,918 copying fibsem/utils.py -> build/lib/fibsem 2024-01-14T01:33:07,921 copying fibsem/config.py -> build/lib/fibsem 2024-01-14T01:33:07,925 copying fibsem/_version.py -> build/lib/fibsem 2024-01-14T01:33:07,927 copying fibsem/alignment.py -> build/lib/fibsem 2024-01-14T01:33:07,930 copying fibsem/movement.py -> build/lib/fibsem 2024-01-14T01:33:07,932 copying fibsem/milling.py -> build/lib/fibsem 2024-01-14T01:33:07,935 copying fibsem/constants.py -> build/lib/fibsem 2024-01-14T01:33:07,937 copying fibsem/conversions.py -> build/lib/fibsem 2024-01-14T01:33:07,939 copying fibsem/configuration.py -> build/lib/fibsem 2024-01-14T01:33:07,941 copying fibsem/structures.py -> build/lib/fibsem 2024-01-14T01:33:07,945 copying fibsem/calibration.py -> build/lib/fibsem 2024-01-14T01:33:07,948 creating build/lib/fibsem/segmentation 2024-01-14T01:33:07,950 copying fibsem/segmentation/sam_model.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,952 copying fibsem/segmentation/train.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,954 copying fibsem/segmentation/_nnunet.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,957 copying fibsem/segmentation/__init__.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,959 copying fibsem/segmentation/nnunet_model.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,961 copying fibsem/segmentation/utils.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,964 copying fibsem/segmentation/config.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,966 copying fibsem/segmentation/dataset.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,969 copying fibsem/segmentation/model.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,971 copying fibsem/segmentation/inference.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,973 copying fibsem/segmentation/onnx_model.py -> build/lib/fibsem/segmentation 2024-01-14T01:33:07,977 creating build/lib/fibsem/ui 2024-01-14T01:33:07,978 copying fibsem/ui/_stylesheets.py -> build/lib/fibsem/ui 2024-01-14T01:33:07,980 copying fibsem/ui/FibsemDetectionWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:07,983 copying fibsem/ui/FibsemSegmentationModelWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:07,985 copying fibsem/ui/FibsemFeatureLabellingUI.py -> build/lib/fibsem/ui 2024-01-14T01:33:07,988 copying fibsem/ui/FibsemMicroscopeConfigurationWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:07,990 copying fibsem/ui/FibsemDetectionUI.py -> build/lib/fibsem/ui 2024-01-14T01:33:07,993 copying fibsem/ui/FibsemMinimapWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:07,995 copying fibsem/ui/FibsemModelTrainingWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:07,997 copying fibsem/ui/FibsemLabellingUI.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,000 copying fibsem/ui/FibsemMillingWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,002 copying fibsem/ui/FibsemGISWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,004 copying fibsem/ui/FibsemUI.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,007 copying fibsem/ui/FibsemImageViewer.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,009 copying fibsem/ui/FibsemImageSettingsWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,011 copying fibsem/ui/FibsemManipulatorWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,013 copying fibsem/ui/__init__.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,014 copying fibsem/ui/utils.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,017 copying fibsem/ui/FibsemCryoSputterWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,019 copying fibsem/ui/FibsemEmbeddedDetectionWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,021 copying fibsem/ui/FibsemMovementWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,023 copying fibsem/ui/FibsemMultiChemWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,025 copying fibsem/ui/FibsemAlignmentWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,027 copying fibsem/ui/windows.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,029 copying fibsem/ui/FibsemPositionsWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,031 copying fibsem/ui/FibsemSystemSetupWidget.py -> build/lib/fibsem/ui 2024-01-14T01:33:08,034 creating build/lib/fibsem/imaging 2024-01-14T01:33:08,035 copying fibsem/imaging/masks.py -> build/lib/fibsem/imaging 2024-01-14T01:33:08,037 copying fibsem/imaging/__init__.py -> build/lib/fibsem/imaging 2024-01-14T01:33:08,038 copying fibsem/imaging/utils.py -> build/lib/fibsem/imaging 2024-01-14T01:33:08,040 copying fibsem/imaging/_tile.py -> build/lib/fibsem/imaging 2024-01-14T01:33:08,042 creating build/lib/fibsem/detection 2024-01-14T01:33:08,043 copying fibsem/detection/run_evaluation.py -> build/lib/fibsem/detection 2024-01-14T01:33:08,045 copying fibsem/detection/detection.py -> build/lib/fibsem/detection 2024-01-14T01:33:08,048 copying fibsem/detection/__init__.py -> build/lib/fibsem/detection 2024-01-14T01:33:08,050 copying fibsem/detection/utils.py -> build/lib/fibsem/detection 2024-01-14T01:33:08,052 copying fibsem/detection/evaluation.py -> build/lib/fibsem/detection 2024-01-14T01:33:08,054 running egg_info 2024-01-14T01:33:08,110 writing fibsem.egg-info/PKG-INFO 2024-01-14T01:33:08,113 writing dependency_links to fibsem.egg-info/dependency_links.txt 2024-01-14T01:33:08,115 writing entry points to fibsem.egg-info/entry_points.txt 2024-01-14T01:33:08,117 writing requirements to fibsem.egg-info/requires.txt 2024-01-14T01:33:08,118 writing top-level names to fibsem.egg-info/top_level.txt 2024-01-14T01:33:08,152 reading manifest file 'fibsem.egg-info/SOURCES.txt' 2024-01-14T01:33:08,164 reading manifest template 'MANIFEST.in' 2024-01-14T01:33:08,165 warning: no previously-included files matching '__pycache__' found under directory '*' 2024-01-14T01:33:08,166 warning: no previously-included files matching '*.py[co]' found under directory '*' 2024-01-14T01:33:08,168 warning: no previously-included files matching '*.ui' found under directory '*' 2024-01-14T01:33:08,168 adding license file 'LICENSE' 2024-01-14T01:33:08,175 writing manifest file 'fibsem.egg-info/SOURCES.txt' 2024-01-14T01:33:08,178 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.chat' is absent from the `packages` configuration. 2024-01-14T01:33:08,179 !! 2024-01-14T01:33:08,180 ******************************************************************************** 2024-01-14T01:33:08,180 ############################ 2024-01-14T01:33:08,181 # Package would be ignored # 2024-01-14T01:33:08,181 ############################ 2024-01-14T01:33:08,182 Python recognizes 'fibsem.chat' as an importable package[^1], 2024-01-14T01:33:08,183 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,184 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,184 package, please make sure that 'fibsem.chat' is explicitly added 2024-01-14T01:33:08,185 to the `packages` configuration field. 2024-01-14T01:33:08,185 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,186 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,186 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,187 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,188 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,189 If you don't want 'fibsem.chat' to be distributed and are 2024-01-14T01:33:08,189 already explicitly excluding 'fibsem.chat' via 2024-01-14T01:33:08,190 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,190 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,190 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,191 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,192 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,194 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,195 even if it does not contain any `.py` files. 2024-01-14T01:33:08,195 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,196 directory, all directories are treated like packages. 2024-01-14T01:33:08,196 ******************************************************************************** 2024-01-14T01:33:08,197 !! 2024-01-14T01:33:08,198 check.warn(importable) 2024-01-14T01:33:08,198 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.config' is absent from the `packages` configuration. 2024-01-14T01:33:08,199 !! 2024-01-14T01:33:08,200 ******************************************************************************** 2024-01-14T01:33:08,200 ############################ 2024-01-14T01:33:08,201 # Package would be ignored # 2024-01-14T01:33:08,201 ############################ 2024-01-14T01:33:08,202 Python recognizes 'fibsem.config' as an importable package[^1], 2024-01-14T01:33:08,202 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,203 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,204 package, please make sure that 'fibsem.config' is explicitly added 2024-01-14T01:33:08,204 to the `packages` configuration field. 2024-01-14T01:33:08,205 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,206 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,206 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,207 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,208 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,209 If you don't want 'fibsem.config' to be distributed and are 2024-01-14T01:33:08,210 already explicitly excluding 'fibsem.config' via 2024-01-14T01:33:08,210 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,210 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,211 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,212 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,213 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,214 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,214 even if it does not contain any `.py` files. 2024-01-14T01:33:08,215 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,215 directory, all directories are treated like packages. 2024-01-14T01:33:08,216 ******************************************************************************** 2024-01-14T01:33:08,217 !! 2024-01-14T01:33:08,217 check.warn(importable) 2024-01-14T01:33:08,217 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.db' is absent from the `packages` configuration. 2024-01-14T01:33:08,218 !! 2024-01-14T01:33:08,219 ******************************************************************************** 2024-01-14T01:33:08,219 ############################ 2024-01-14T01:33:08,219 # Package would be ignored # 2024-01-14T01:33:08,220 ############################ 2024-01-14T01:33:08,220 Python recognizes 'fibsem.db' as an importable package[^1], 2024-01-14T01:33:08,221 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,222 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,222 package, please make sure that 'fibsem.db' is explicitly added 2024-01-14T01:33:08,222 to the `packages` configuration field. 2024-01-14T01:33:08,223 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,224 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,224 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,225 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,226 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,227 If you don't want 'fibsem.db' to be distributed and are 2024-01-14T01:33:08,227 already explicitly excluding 'fibsem.db' via 2024-01-14T01:33:08,228 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,228 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,229 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,230 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,231 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,232 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,233 even if it does not contain any `.py` files. 2024-01-14T01:33:08,233 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,234 directory, all directories are treated like packages. 2024-01-14T01:33:08,234 ******************************************************************************** 2024-01-14T01:33:08,235 !! 2024-01-14T01:33:08,236 check.warn(importable) 2024-01-14T01:33:08,236 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.detection.test_images' is absent from the `packages` configuration. 2024-01-14T01:33:08,237 !! 2024-01-14T01:33:08,238 ******************************************************************************** 2024-01-14T01:33:08,238 ############################ 2024-01-14T01:33:08,239 # Package would be ignored # 2024-01-14T01:33:08,239 ############################ 2024-01-14T01:33:08,240 Python recognizes 'fibsem.detection.test_images' as an importable package[^1], 2024-01-14T01:33:08,240 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,241 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,241 package, please make sure that 'fibsem.detection.test_images' is explicitly added 2024-01-14T01:33:08,242 to the `packages` configuration field. 2024-01-14T01:33:08,243 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,243 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,244 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,244 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,245 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,246 If you don't want 'fibsem.detection.test_images' to be distributed and are 2024-01-14T01:33:08,247 already explicitly excluding 'fibsem.detection.test_images' via 2024-01-14T01:33:08,247 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,247 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,248 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,249 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,250 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,251 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,251 even if it does not contain any `.py` files. 2024-01-14T01:33:08,252 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,252 directory, all directories are treated like packages. 2024-01-14T01:33:08,253 ******************************************************************************** 2024-01-14T01:33:08,254 !! 2024-01-14T01:33:08,254 check.warn(importable) 2024-01-14T01:33:08,254 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.detection.test_images.serial' is absent from the `packages` configuration. 2024-01-14T01:33:08,255 !! 2024-01-14T01:33:08,256 ******************************************************************************** 2024-01-14T01:33:08,256 ############################ 2024-01-14T01:33:08,257 # Package would be ignored # 2024-01-14T01:33:08,257 ############################ 2024-01-14T01:33:08,258 Python recognizes 'fibsem.detection.test_images.serial' as an importable package[^1], 2024-01-14T01:33:08,258 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,259 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,260 package, please make sure that 'fibsem.detection.test_images.serial' is explicitly added 2024-01-14T01:33:08,260 to the `packages` configuration field. 2024-01-14T01:33:08,261 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,262 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,263 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,264 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,265 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,266 If you don't want 'fibsem.detection.test_images.serial' to be distributed and are 2024-01-14T01:33:08,267 already explicitly excluding 'fibsem.detection.test_images.serial' via 2024-01-14T01:33:08,268 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,268 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,268 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,269 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,270 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,271 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,272 even if it does not contain any `.py` files. 2024-01-14T01:33:08,272 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,273 directory, all directories are treated like packages. 2024-01-14T01:33:08,273 ******************************************************************************** 2024-01-14T01:33:08,274 !! 2024-01-14T01:33:08,275 check.warn(importable) 2024-01-14T01:33:08,275 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.docs' is absent from the `packages` configuration. 2024-01-14T01:33:08,276 !! 2024-01-14T01:33:08,279 ******************************************************************************** 2024-01-14T01:33:08,281 ############################ 2024-01-14T01:33:08,284 # Package would be ignored # 2024-01-14T01:33:08,286 ############################ 2024-01-14T01:33:08,287 Python recognizes 'fibsem.segmentation.docs' as an importable package[^1], 2024-01-14T01:33:08,288 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,290 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,291 package, please make sure that 'fibsem.segmentation.docs' is explicitly added 2024-01-14T01:33:08,292 to the `packages` configuration field. 2024-01-14T01:33:08,293 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,294 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,294 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,297 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,298 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,299 If you don't want 'fibsem.segmentation.docs' to be distributed and are 2024-01-14T01:33:08,299 already explicitly excluding 'fibsem.segmentation.docs' via 2024-01-14T01:33:08,300 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,301 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,301 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,302 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,303 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,305 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,306 even if it does not contain any `.py` files. 2024-01-14T01:33:08,306 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,307 directory, all directories are treated like packages. 2024-01-14T01:33:08,307 ******************************************************************************** 2024-01-14T01:33:08,308 !! 2024-01-14T01:33:08,309 check.warn(importable) 2024-01-14T01:33:08,310 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.docs.imgs.combined' is absent from the `packages` configuration. 2024-01-14T01:33:08,310 !! 2024-01-14T01:33:08,312 ******************************************************************************** 2024-01-14T01:33:08,313 ############################ 2024-01-14T01:33:08,314 # Package would be ignored # 2024-01-14T01:33:08,314 ############################ 2024-01-14T01:33:08,315 Python recognizes 'fibsem.segmentation.docs.imgs.combined' as an importable package[^1], 2024-01-14T01:33:08,315 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,317 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,318 package, please make sure that 'fibsem.segmentation.docs.imgs.combined' is explicitly added 2024-01-14T01:33:08,318 to the `packages` configuration field. 2024-01-14T01:33:08,319 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,320 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,321 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,322 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,323 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,324 If you don't want 'fibsem.segmentation.docs.imgs.combined' to be distributed and are 2024-01-14T01:33:08,325 already explicitly excluding 'fibsem.segmentation.docs.imgs.combined' via 2024-01-14T01:33:08,326 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,326 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,327 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,328 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,329 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,339 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,346 even if it does not contain any `.py` files. 2024-01-14T01:33:08,350 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,353 directory, all directories are treated like packages. 2024-01-14T01:33:08,353 ******************************************************************************** 2024-01-14T01:33:08,354 !! 2024-01-14T01:33:08,354 check.warn(importable) 2024-01-14T01:33:08,355 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.docs.imgs.labelled' is absent from the `packages` configuration. 2024-01-14T01:33:08,356 !! 2024-01-14T01:33:08,357 ******************************************************************************** 2024-01-14T01:33:08,357 ############################ 2024-01-14T01:33:08,358 # Package would be ignored # 2024-01-14T01:33:08,358 ############################ 2024-01-14T01:33:08,359 Python recognizes 'fibsem.segmentation.docs.imgs.labelled' as an importable package[^1], 2024-01-14T01:33:08,359 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,361 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,361 package, please make sure that 'fibsem.segmentation.docs.imgs.labelled' is explicitly added 2024-01-14T01:33:08,362 to the `packages` configuration field. 2024-01-14T01:33:08,363 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,364 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,364 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,368 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,379 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,380 If you don't want 'fibsem.segmentation.docs.imgs.labelled' to be distributed and are 2024-01-14T01:33:08,380 already explicitly excluding 'fibsem.segmentation.docs.imgs.labelled' via 2024-01-14T01:33:08,381 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,381 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,382 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,382 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,384 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,385 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,385 even if it does not contain any `.py` files. 2024-01-14T01:33:08,386 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,386 directory, all directories are treated like packages. 2024-01-14T01:33:08,387 ******************************************************************************** 2024-01-14T01:33:08,388 !! 2024-01-14T01:33:08,388 check.warn(importable) 2024-01-14T01:33:08,389 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.docs.imgs.raw' is absent from the `packages` configuration. 2024-01-14T01:33:08,389 !! 2024-01-14T01:33:08,391 ******************************************************************************** 2024-01-14T01:33:08,399 ############################ 2024-01-14T01:33:08,405 # Package would be ignored # 2024-01-14T01:33:08,406 ############################ 2024-01-14T01:33:08,407 Python recognizes 'fibsem.segmentation.docs.imgs.raw' as an importable package[^1], 2024-01-14T01:33:08,407 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,408 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,409 package, please make sure that 'fibsem.segmentation.docs.imgs.raw' is explicitly added 2024-01-14T01:33:08,409 to the `packages` configuration field. 2024-01-14T01:33:08,410 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,411 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,411 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,413 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,414 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,415 If you don't want 'fibsem.segmentation.docs.imgs.raw' to be distributed and are 2024-01-14T01:33:08,417 already explicitly excluding 'fibsem.segmentation.docs.imgs.raw' via 2024-01-14T01:33:08,419 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,420 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,426 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,430 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,431 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,433 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,434 even if it does not contain any `.py` files. 2024-01-14T01:33:08,434 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,435 directory, all directories are treated like packages. 2024-01-14T01:33:08,435 ******************************************************************************** 2024-01-14T01:33:08,436 !! 2024-01-14T01:33:08,437 check.warn(importable) 2024-01-14T01:33:08,437 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.models' is absent from the `packages` configuration. 2024-01-14T01:33:08,438 !! 2024-01-14T01:33:08,439 ******************************************************************************** 2024-01-14T01:33:08,439 ############################ 2024-01-14T01:33:08,439 # Package would be ignored # 2024-01-14T01:33:08,440 ############################ 2024-01-14T01:33:08,440 Python recognizes 'fibsem.segmentation.models' as an importable package[^1], 2024-01-14T01:33:08,441 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,442 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,442 package, please make sure that 'fibsem.segmentation.models' is explicitly added 2024-01-14T01:33:08,443 to the `packages` configuration field. 2024-01-14T01:33:08,444 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,444 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,445 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,446 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,447 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,448 If you don't want 'fibsem.segmentation.models' to be distributed and are 2024-01-14T01:33:08,448 already explicitly excluding 'fibsem.segmentation.models' via 2024-01-14T01:33:08,449 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,450 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,450 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,451 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,452 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,454 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,454 even if it does not contain any `.py` files. 2024-01-14T01:33:08,455 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,455 directory, all directories are treated like packages. 2024-01-14T01:33:08,456 ******************************************************************************** 2024-01-14T01:33:08,457 !! 2024-01-14T01:33:08,457 check.warn(importable) 2024-01-14T01:33:08,458 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.tools' is absent from the `packages` configuration. 2024-01-14T01:33:08,458 !! 2024-01-14T01:33:08,459 ******************************************************************************** 2024-01-14T01:33:08,460 ############################ 2024-01-14T01:33:08,461 # Package would be ignored # 2024-01-14T01:33:08,461 ############################ 2024-01-14T01:33:08,462 Python recognizes 'fibsem.tools' as an importable package[^1], 2024-01-14T01:33:08,463 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,464 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,465 package, please make sure that 'fibsem.tools' is explicitly added 2024-01-14T01:33:08,465 to the `packages` configuration field. 2024-01-14T01:33:08,467 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,468 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,468 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,469 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,470 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,471 If you don't want 'fibsem.tools' to be distributed and are 2024-01-14T01:33:08,472 already explicitly excluding 'fibsem.tools' via 2024-01-14T01:33:08,472 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,473 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,473 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,474 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,475 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,476 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,477 even if it does not contain any `.py` files. 2024-01-14T01:33:08,477 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,478 directory, all directories are treated like packages. 2024-01-14T01:33:08,478 ******************************************************************************** 2024-01-14T01:33:08,479 !! 2024-01-14T01:33:08,480 check.warn(importable) 2024-01-14T01:33:08,480 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.ui.qtdesigner_files' is absent from the `packages` configuration. 2024-01-14T01:33:08,481 !! 2024-01-14T01:33:08,482 ******************************************************************************** 2024-01-14T01:33:08,482 ############################ 2024-01-14T01:33:08,483 # Package would be ignored # 2024-01-14T01:33:08,483 ############################ 2024-01-14T01:33:08,483 Python recognizes 'fibsem.ui.qtdesigner_files' as an importable package[^1], 2024-01-14T01:33:08,484 but it is absent from setuptools' `packages` configuration. 2024-01-14T01:33:08,485 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-14T01:33:08,485 package, please make sure that 'fibsem.ui.qtdesigner_files' is explicitly added 2024-01-14T01:33:08,486 to the `packages` configuration field. 2024-01-14T01:33:08,487 Alternatively, you can also rely on setuptools' discovery methods 2024-01-14T01:33:08,487 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-14T01:33:08,488 instead of `find_packages(...)`/`find:`). 2024-01-14T01:33:08,489 You can read more about "package discovery" on setuptools documentation page: 2024-01-14T01:33:08,490 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-14T01:33:08,491 If you don't want 'fibsem.ui.qtdesigner_files' to be distributed and are 2024-01-14T01:33:08,492 already explicitly excluding 'fibsem.ui.qtdesigner_files' via 2024-01-14T01:33:08,492 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-14T01:33:08,493 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-14T01:33:08,493 combination with a more fine grained `package-data` configuration. 2024-01-14T01:33:08,495 You can read more about "package data files" on setuptools documentation page: 2024-01-14T01:33:08,496 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-14T01:33:08,497 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-14T01:33:08,497 even if it does not contain any `.py` files. 2024-01-14T01:33:08,497 On the other hand, currently there is no concept of package data 2024-01-14T01:33:08,498 directory, all directories are treated like packages. 2024-01-14T01:33:08,499 ******************************************************************************** 2024-01-14T01:33:08,499 !! 2024-01-14T01:33:08,500 check.warn(importable) 2024-01-14T01:33:08,500 creating build/lib/fibsem/chat 2024-01-14T01:33:08,500 copying fibsem/chat/.gitignore -> build/lib/fibsem/chat 2024-01-14T01:33:08,501 copying fibsem/chat/main.py -> build/lib/fibsem/chat 2024-01-14T01:33:08,501 copying fibsem/chat/requirements.txt -> build/lib/fibsem/chat 2024-01-14T01:33:08,502 creating build/lib/fibsem/config 2024-01-14T01:33:08,502 copying fibsem/config/deposition.dbp -> build/lib/fibsem/config 2024-01-14T01:33:08,503 copying fibsem/config/microscope-configuration.yaml -> build/lib/fibsem/config 2024-01-14T01:33:08,503 copying fibsem/config/positions.yaml -> build/lib/fibsem/config 2024-01-14T01:33:08,504 copying fibsem/config/protocol.yaml -> build/lib/fibsem/config 2024-01-14T01:33:08,504 copying fibsem/config/system.yaml -> build/lib/fibsem/config 2024-01-14T01:33:08,505 copying fibsem/config/user-configurations.yaml -> build/lib/fibsem/config 2024-01-14T01:33:08,505 creating build/lib/fibsem/db 2024-01-14T01:33:08,505 copying fibsem/db/app.py -> build/lib/fibsem/db 2024-01-14T01:33:08,506 copying fibsem/db/config.yaml -> build/lib/fibsem/db 2024-01-14T01:33:08,506 copying fibsem/db/notebook.ipynb -> build/lib/fibsem/db 2024-01-14T01:33:08,507 copying fibsem/db/util.py -> build/lib/fibsem/db 2024-01-14T01:33:08,507 creating build/lib/fibsem/tools 2024-01-14T01:33:08,508 copying fibsem/tools/_parser.py -> build/lib/fibsem/tools 2024-01-14T01:33:08,508 copying fibsem/tools/run_manipulator_calibration.py -> build/lib/fibsem/tools 2024-01-14T01:33:08,509 copying fibsem/tools/run_split_dataset.py -> build/lib/fibsem/tools 2024-01-14T01:33:08,509 copying fibsem/tools/telemetry.py -> build/lib/fibsem/tools 2024-01-14T01:33:08,510 copying fibsem/segmentation/README.md -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,510 copying fibsem/segmentation/augmentation.ipynb -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,511 copying fibsem/segmentation/config-autolamella-mega-v4-xl.yml -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,511 copying fibsem/segmentation/config-autolamella-mega-v4.yml -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,511 copying fibsem/segmentation/config-autolamella-mega-v5.yml -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,512 copying fibsem/segmentation/config-autolamella-serial-liftout-v1.yaml -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,512 copying fibsem/segmentation/config-autolamella-waffle4.yml -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,513 copying fibsem/segmentation/config.yml -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,513 copying fibsem/segmentation/example.ipynb -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,514 copying fibsem/segmentation/requirements.txt -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,514 copying fibsem/segmentation/segmentation_config.yaml -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,515 copying fibsem/segmentation/test_image.tif -> build/lib/fibsem/segmentation 2024-01-14T01:33:08,515 creating build/lib/fibsem/segmentation/docs 2024-01-14T01:33:08,516 copying fibsem/segmentation/docs/example_napari.png -> build/lib/fibsem/segmentation/docs 2024-01-14T01:33:08,516 creating build/lib/fibsem/segmentation/docs/imgs 2024-01-14T01:33:08,517 creating build/lib/fibsem/segmentation/docs/imgs/combined 2024-01-14T01:33:08,517 copying fibsem/segmentation/docs/imgs/combined/combined.jpg -> build/lib/fibsem/segmentation/docs/imgs/combined 2024-01-14T01:33:08,518 creating build/lib/fibsem/segmentation/docs/imgs/labelled 2024-01-14T01:33:08,518 copying fibsem/segmentation/docs/imgs/labelled/label.tif -> build/lib/fibsem/segmentation/docs/imgs/labelled 2024-01-14T01:33:08,518 creating build/lib/fibsem/segmentation/docs/imgs/raw 2024-01-14T01:33:08,519 copying fibsem/segmentation/docs/imgs/raw/image.tif -> build/lib/fibsem/segmentation/docs/imgs/raw 2024-01-14T01:33:08,519 creating build/lib/fibsem/segmentation/models 2024-01-14T01:33:08,520 copying fibsem/segmentation/models/.gitkeep -> build/lib/fibsem/segmentation/models 2024-01-14T01:33:08,520 copying fibsem/ui/.gitkeep -> build/lib/fibsem/ui 2024-01-14T01:33:08,521 creating build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,521 copying fibsem/ui/qtdesigner_files/CurrentAlignmentWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,521 copying fibsem/ui/qtdesigner_files/FibsemCryoSputterWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,522 copying fibsem/ui/qtdesigner_files/FibsemDetectionWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,522 copying fibsem/ui/qtdesigner_files/FibsemEmbeddedDetectionWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,523 copying fibsem/ui/qtdesigner_files/FibsemFeatureDetectionUI.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,524 copying fibsem/ui/qtdesigner_files/FibsemGISWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,524 copying fibsem/ui/qtdesigner_files/FibsemLabellingUI.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,525 copying fibsem/ui/qtdesigner_files/FibsemManipulatorWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,526 copying fibsem/ui/qtdesigner_files/FibsemMicroscopeConfigurationWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,527 copying fibsem/ui/qtdesigner_files/FibsemMillingWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,527 copying fibsem/ui/qtdesigner_files/FibsemMinimapWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,528 copying fibsem/ui/qtdesigner_files/FibsemModelTrainingWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,529 copying fibsem/ui/qtdesigner_files/FibsemMovementWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,529 copying fibsem/ui/qtdesigner_files/FibsemMultiChemWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,530 copying fibsem/ui/qtdesigner_files/FibsemPositionsWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,538 copying fibsem/ui/qtdesigner_files/FibsemSegmentationModelWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,541 copying fibsem/ui/qtdesigner_files/FibsemSettingUI.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,543 copying fibsem/ui/qtdesigner_files/FibsemSettings.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,552 copying fibsem/ui/qtdesigner_files/FibsemSystemSetupWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,554 copying fibsem/ui/qtdesigner_files/FibsemUI.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,556 copying fibsem/ui/qtdesigner_files/ImageSettingsWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,557 copying fibsem/ui/qtdesigner_files/detection_dialog.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,558 copying fibsem/ui/qtdesigner_files/image_viewer.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,559 copying fibsem/ui/qtdesigner_files/needle_popup.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,559 copying fibsem/ui/qtdesigner_files/user_dialog.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-14T01:33:08,560 copying fibsem/imaging/.gitkeep -> build/lib/fibsem/imaging 2024-01-14T01:33:08,561 copying fibsem/detection/config-autolamella-serial-liftout.yaml -> build/lib/fibsem/detection 2024-01-14T01:33:08,562 copying fibsem/detection/config-autolamella-waffle.yml -> build/lib/fibsem/detection 2024-01-14T01:33:08,563 copying fibsem/detection/config-autoliftout-dm-embryo.yml -> build/lib/fibsem/detection 2024-01-14T01:33:08,563 copying fibsem/detection/test_image.tif -> build/lib/fibsem/detection 2024-01-14T01:33:08,564 creating build/lib/fibsem/detection/test_images 2024-01-14T01:33:08,565 copying fibsem/detection/test_images/test_needle_mask.tif -> build/lib/fibsem/detection/test_images 2024-01-14T01:33:08,566 copying fibsem/detection/test_images/test_needle_mask2.tif -> build/lib/fibsem/detection/test_images 2024-01-14T01:33:08,567 copying fibsem/detection/test_images/test_needle_mask3.tif -> build/lib/fibsem/detection/test_images 2024-01-14T01:33:08,569 creating build/lib/fibsem/detection/test_images/serial 2024-01-14T01:33:08,571 copying fibsem/detection/test_images/serial/serial_liftout_mask_00.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-14T01:33:08,574 copying fibsem/detection/test_images/serial/serial_liftout_mask_01.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-14T01:33:08,577 copying fibsem/detection/test_images/serial/serial_liftout_mask_02.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-14T01:33:08,581 copying fibsem/detection/test_images/serial/serial_liftout_mask_03.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-14T01:33:08,584 copying fibsem/detection/test_images/serial/serial_liftout_mask_04.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-14T01:33:08,587 copying fibsem/detection/test_images/serial/serial_liftout_mask_05.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-14T01:33:08,590 copying fibsem/detection/test_images/serial/serial_liftout_mask_06.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-14T01:33:08,593 copying fibsem/detection/test_images/serial/serial_liftout_mask_07.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-14T01:33:08,631 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-01-14T01:33:08,632 !! 2024-01-14T01:33:08,633 ******************************************************************************** 2024-01-14T01:33:08,634 Please avoid running ``setup.py`` directly. 2024-01-14T01:33:08,634 Instead, use pypa/build, pypa/installer or other 2024-01-14T01:33:08,635 standards-based tools. 2024-01-14T01:33:08,636 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-01-14T01:33:08,636 ******************************************************************************** 2024-01-14T01:33:08,638 !! 2024-01-14T01:33:08,638 self.initialize_options() 2024-01-14T01:33:08,656 installing to build/bdist.linux-armv7l/wheel 2024-01-14T01:33:08,657 running install 2024-01-14T01:33:08,680 running install_lib 2024-01-14T01:33:08,705 creating build/bdist.linux-armv7l 2024-01-14T01:33:08,706 creating build/bdist.linux-armv7l/wheel 2024-01-14T01:33:08,707 creating build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:08,709 creating build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-14T01:33:08,710 copying build/lib/fibsem/db/notebook.ipynb -> build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-14T01:33:08,713 copying build/lib/fibsem/db/util.py -> build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-14T01:33:08,715 copying build/lib/fibsem/db/config.yaml -> build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-14T01:33:08,717 copying build/lib/fibsem/db/app.py -> build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-14T01:33:08,719 copying build/lib/fibsem/microscope.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:08,726 copying build/lib/fibsem/gis.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:08,728 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,729 copying build/lib/fibsem/segmentation/config.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,731 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/models 2024-01-14T01:33:08,732 copying build/lib/fibsem/segmentation/models/.gitkeep -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/models 2024-01-14T01:33:08,733 copying build/lib/fibsem/segmentation/sam_model.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,735 copying build/lib/fibsem/segmentation/train.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,737 copying build/lib/fibsem/segmentation/config-autolamella-serial-liftout-v1.yaml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,739 copying build/lib/fibsem/segmentation/config-autolamella-mega-v5.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,740 copying build/lib/fibsem/segmentation/augmentation.ipynb -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,742 copying build/lib/fibsem/segmentation/_nnunet.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,745 copying build/lib/fibsem/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,746 copying build/lib/fibsem/segmentation/nnunet_model.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,748 copying build/lib/fibsem/segmentation/utils.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,750 copying build/lib/fibsem/segmentation/config-autolamella-mega-v4.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,752 copying build/lib/fibsem/segmentation/config-autolamella-mega-v4-xl.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,754 copying build/lib/fibsem/segmentation/config-autolamella-waffle4.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,755 copying build/lib/fibsem/segmentation/config.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,757 copying build/lib/fibsem/segmentation/test_image.tif -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,784 copying build/lib/fibsem/segmentation/dataset.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,786 copying build/lib/fibsem/segmentation/README.md -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,788 copying build/lib/fibsem/segmentation/requirements.txt -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,790 copying build/lib/fibsem/segmentation/model.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,792 copying build/lib/fibsem/segmentation/inference.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,794 copying build/lib/fibsem/segmentation/example.ipynb -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,798 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs 2024-01-14T01:33:08,799 copying build/lib/fibsem/segmentation/docs/example_napari.png -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs 2024-01-14T01:33:08,853 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs 2024-01-14T01:33:08,854 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/combined 2024-01-14T01:33:08,855 copying build/lib/fibsem/segmentation/docs/imgs/combined/combined.jpg -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/combined 2024-01-14T01:33:08,876 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/raw 2024-01-14T01:33:08,877 copying build/lib/fibsem/segmentation/docs/imgs/raw/image.tif -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/raw 2024-01-14T01:33:08,901 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/labelled 2024-01-14T01:33:08,902 copying build/lib/fibsem/segmentation/docs/imgs/labelled/label.tif -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/labelled 2024-01-14T01:33:08,927 copying build/lib/fibsem/segmentation/onnx_model.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,929 copying build/lib/fibsem/segmentation/segmentation_config.yaml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-14T01:33:08,931 copying build/lib/fibsem/patterning.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:08,933 copying build/lib/fibsem/acquire.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:08,936 creating build/bdist.linux-armv7l/wheel/fibsem/chat 2024-01-14T01:33:08,936 copying build/lib/fibsem/chat/main.py -> build/bdist.linux-armv7l/wheel/fibsem/chat 2024-01-14T01:33:08,938 copying build/lib/fibsem/chat/requirements.txt -> build/bdist.linux-armv7l/wheel/fibsem/chat 2024-01-14T01:33:08,940 copying build/lib/fibsem/chat/.gitignore -> build/bdist.linux-armv7l/wheel/fibsem/chat 2024-01-14T01:33:08,941 copying build/lib/fibsem/validation.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:08,943 copying build/lib/fibsem/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:08,946 creating build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,947 copying build/lib/fibsem/ui/_stylesheets.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,949 copying build/lib/fibsem/ui/FibsemDetectionWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,951 copying build/lib/fibsem/ui/FibsemSegmentationModelWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,953 copying build/lib/fibsem/ui/FibsemFeatureLabellingUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,955 copying build/lib/fibsem/ui/FibsemMicroscopeConfigurationWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,958 copying build/lib/fibsem/ui/FibsemDetectionUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,960 copying build/lib/fibsem/ui/FibsemMinimapWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,963 copying build/lib/fibsem/ui/FibsemModelTrainingWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,965 copying build/lib/fibsem/ui/FibsemLabellingUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,968 copying build/lib/fibsem/ui/FibsemMillingWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,971 copying build/lib/fibsem/ui/FibsemGISWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,973 copying build/lib/fibsem/ui/FibsemUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,976 copying build/lib/fibsem/ui/FibsemImageViewer.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,979 copying build/lib/fibsem/ui/FibsemImageSettingsWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,982 copying build/lib/fibsem/ui/FibsemManipulatorWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,984 copying build/lib/fibsem/ui/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,986 copying build/lib/fibsem/ui/.gitkeep -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,988 copying build/lib/fibsem/ui/utils.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,990 copying build/lib/fibsem/ui/FibsemCryoSputterWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,993 copying build/lib/fibsem/ui/FibsemEmbeddedDetectionWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,995 copying build/lib/fibsem/ui/FibsemMovementWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:08,998 copying build/lib/fibsem/ui/FibsemMultiChemWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:09,000 copying build/lib/fibsem/ui/FibsemAlignmentWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:09,003 copying build/lib/fibsem/ui/windows.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:09,006 creating build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,007 copying build/lib/fibsem/ui/qtdesigner_files/detection_dialog.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,010 copying build/lib/fibsem/ui/qtdesigner_files/CurrentAlignmentWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,012 copying build/lib/fibsem/ui/qtdesigner_files/FibsemDetectionWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,015 copying build/lib/fibsem/ui/qtdesigner_files/FibsemSegmentationModelWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,017 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMicroscopeConfigurationWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,020 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMinimapWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,023 copying build/lib/fibsem/ui/qtdesigner_files/FibsemModelTrainingWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,025 copying build/lib/fibsem/ui/qtdesigner_files/FibsemSettings.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,028 copying build/lib/fibsem/ui/qtdesigner_files/FibsemLabellingUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,031 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMillingWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,034 copying build/lib/fibsem/ui/qtdesigner_files/FibsemGISWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,036 copying build/lib/fibsem/ui/qtdesigner_files/FibsemSettingUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,039 copying build/lib/fibsem/ui/qtdesigner_files/FibsemUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,041 copying build/lib/fibsem/ui/qtdesigner_files/FibsemManipulatorWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,044 copying build/lib/fibsem/ui/qtdesigner_files/image_viewer.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,047 copying build/lib/fibsem/ui/qtdesigner_files/FibsemCryoSputterWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,049 copying build/lib/fibsem/ui/qtdesigner_files/user_dialog.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,051 copying build/lib/fibsem/ui/qtdesigner_files/FibsemEmbeddedDetectionWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,054 copying build/lib/fibsem/ui/qtdesigner_files/FibsemFeatureDetectionUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,056 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMovementWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,059 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMultiChemWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,062 copying build/lib/fibsem/ui/qtdesigner_files/ImageSettingsWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,064 copying build/lib/fibsem/ui/qtdesigner_files/needle_popup.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,066 copying build/lib/fibsem/ui/qtdesigner_files/FibsemPositionsWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,069 copying build/lib/fibsem/ui/qtdesigner_files/FibsemSystemSetupWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-14T01:33:09,071 copying build/lib/fibsem/ui/FibsemPositionsWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:09,074 copying build/lib/fibsem/ui/FibsemSystemSetupWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-14T01:33:09,076 copying build/lib/fibsem/alignment2.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,078 copying build/lib/fibsem/utils.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,081 creating build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-14T01:33:09,082 copying build/lib/fibsem/imaging/masks.py -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-14T01:33:09,084 copying build/lib/fibsem/imaging/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-14T01:33:09,086 copying build/lib/fibsem/imaging/.gitkeep -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-14T01:33:09,087 copying build/lib/fibsem/imaging/utils.py -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-14T01:33:09,089 copying build/lib/fibsem/imaging/_tile.py -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-14T01:33:09,091 copying build/lib/fibsem/config.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,093 copying build/lib/fibsem/_version.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,096 copying build/lib/fibsem/alignment.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,098 copying build/lib/fibsem/movement.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,100 creating build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-14T01:33:09,101 copying build/lib/fibsem/config/microscope-configuration.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-14T01:33:09,103 copying build/lib/fibsem/config/protocol.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-14T01:33:09,105 copying build/lib/fibsem/config/system.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-14T01:33:09,107 copying build/lib/fibsem/config/positions.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-14T01:33:09,109 copying build/lib/fibsem/config/user-configurations.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-14T01:33:09,111 copying build/lib/fibsem/config/deposition.dbp -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-14T01:33:09,113 copying build/lib/fibsem/milling.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,115 copying build/lib/fibsem/constants.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,117 copying build/lib/fibsem/conversions.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,119 copying build/lib/fibsem/configuration.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,121 creating build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-14T01:33:09,122 copying build/lib/fibsem/tools/_parser.py -> build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-14T01:33:09,124 copying build/lib/fibsem/tools/telemetry.py -> build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-14T01:33:09,127 copying build/lib/fibsem/tools/run_manipulator_calibration.py -> build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-14T01:33:09,128 copying build/lib/fibsem/tools/run_split_dataset.py -> build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-14T01:33:09,130 copying build/lib/fibsem/structures.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,134 creating build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,135 copying build/lib/fibsem/detection/config-autoliftout-dm-embryo.yml -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,137 copying build/lib/fibsem/detection/config-autolamella-waffle.yml -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,139 copying build/lib/fibsem/detection/run_evaluation.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,141 copying build/lib/fibsem/detection/detection.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,143 copying build/lib/fibsem/detection/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,145 copying build/lib/fibsem/detection/utils.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,147 copying build/lib/fibsem/detection/test_image.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,172 creating build/bdist.linux-armv7l/wheel/fibsem/detection/test_images 2024-01-14T01:33:09,173 creating build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-14T01:33:09,174 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_06.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-14T01:33:09,177 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_00.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-14T01:33:09,179 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_03.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-14T01:33:09,181 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_01.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-14T01:33:09,184 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_07.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-14T01:33:09,186 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_04.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-14T01:33:09,188 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_02.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-14T01:33:09,191 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_05.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-14T01:33:09,193 copying build/lib/fibsem/detection/test_images/test_needle_mask2.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images 2024-01-14T01:33:09,195 copying build/lib/fibsem/detection/test_images/test_needle_mask3.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images 2024-01-14T01:33:09,197 copying build/lib/fibsem/detection/test_images/test_needle_mask.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images 2024-01-14T01:33:09,200 copying build/lib/fibsem/detection/evaluation.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,202 copying build/lib/fibsem/detection/config-autolamella-serial-liftout.yaml -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-14T01:33:09,204 copying build/lib/fibsem/calibration.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-14T01:33:09,206 running install_egg_info 2024-01-14T01:33:09,236 Copying fibsem.egg-info to build/bdist.linux-armv7l/wheel/fibsem-0.3.0a1-py3.11.egg-info 2024-01-14T01:33:09,247 running install_scripts 2024-01-14T01:33:09,268 creating build/bdist.linux-armv7l/wheel/fibsem-0.3.0a1.dist-info/WHEEL 2024-01-14T01:33:09,270 creating '/tmp/pip-wheel-luw_17cv/fibsem-0.3.0a1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-14T01:33:09,273 adding 'fibsem/__init__.py' 2024-01-14T01:33:09,274 adding 'fibsem/_version.py' 2024-01-14T01:33:09,276 adding 'fibsem/acquire.py' 2024-01-14T01:33:09,279 adding 'fibsem/alignment.py' 2024-01-14T01:33:09,282 adding 'fibsem/alignment2.py' 2024-01-14T01:33:09,284 adding 'fibsem/calibration.py' 2024-01-14T01:33:09,285 adding 'fibsem/config.py' 2024-01-14T01:33:09,287 adding 'fibsem/configuration.py' 2024-01-14T01:33:09,289 adding 'fibsem/constants.py' 2024-01-14T01:33:09,290 adding 'fibsem/conversions.py' 2024-01-14T01:33:09,291 adding 'fibsem/gis.py' 2024-01-14T01:33:09,314 adding 'fibsem/microscope.py' 2024-01-14T01:33:09,318 adding 'fibsem/milling.py' 2024-01-14T01:33:09,319 adding 'fibsem/movement.py' 2024-01-14T01:33:09,322 adding 'fibsem/patterning.py' 2024-01-14T01:33:09,331 adding 'fibsem/structures.py' 2024-01-14T01:33:09,336 adding 'fibsem/utils.py' 2024-01-14T01:33:09,339 adding 'fibsem/validation.py' 2024-01-14T01:33:09,341 adding 'fibsem/chat/.gitignore' 2024-01-14T01:33:09,342 adding 'fibsem/chat/main.py' 2024-01-14T01:33:09,344 adding 'fibsem/chat/requirements.txt' 2024-01-14T01:33:09,346 adding 'fibsem/config/deposition.dbp' 2024-01-14T01:33:09,348 adding 'fibsem/config/microscope-configuration.yaml' 2024-01-14T01:33:09,350 adding 'fibsem/config/positions.yaml' 2024-01-14T01:33:09,351 adding 'fibsem/config/protocol.yaml' 2024-01-14T01:33:09,353 adding 'fibsem/config/system.yaml' 2024-01-14T01:33:09,354 adding 'fibsem/config/user-configurations.yaml' 2024-01-14T01:33:09,358 adding 'fibsem/db/app.py' 2024-01-14T01:33:09,359 adding 'fibsem/db/config.yaml' 2024-01-14T01:33:09,362 adding 'fibsem/db/notebook.ipynb' 2024-01-14T01:33:09,364 adding 'fibsem/db/util.py' 2024-01-14T01:33:09,367 adding 'fibsem/detection/__init__.py' 2024-01-14T01:33:09,368 adding 'fibsem/detection/config-autolamella-serial-liftout.yaml' 2024-01-14T01:33:09,370 adding 'fibsem/detection/config-autolamella-waffle.yml' 2024-01-14T01:33:09,372 adding 'fibsem/detection/config-autoliftout-dm-embryo.yml' 2024-01-14T01:33:09,380 adding 'fibsem/detection/detection.py' 2024-01-14T01:33:09,383 adding 'fibsem/detection/evaluation.py' 2024-01-14T01:33:09,385 adding 'fibsem/detection/run_evaluation.py' 2024-01-14T01:33:09,830 adding 'fibsem/detection/test_image.tif' 2024-01-14T01:33:09,841 adding 'fibsem/detection/utils.py' 2024-01-14T01:33:09,844 adding 'fibsem/detection/test_images/test_needle_mask.tif' 2024-01-14T01:33:09,845 adding 'fibsem/detection/test_images/test_needle_mask2.tif' 2024-01-14T01:33:09,847 adding 'fibsem/detection/test_images/test_needle_mask3.tif' 2024-01-14T01:33:09,850 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_00.tif' 2024-01-14T01:33:09,853 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_01.tif' 2024-01-14T01:33:09,855 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_02.tif' 2024-01-14T01:33:09,857 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_03.tif' 2024-01-14T01:33:09,860 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_04.tif' 2024-01-14T01:33:09,862 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_05.tif' 2024-01-14T01:33:09,864 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_06.tif' 2024-01-14T01:33:09,867 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_07.tif' 2024-01-14T01:33:09,868 adding 'fibsem/imaging/.gitkeep' 2024-01-14T01:33:09,870 adding 'fibsem/imaging/__init__.py' 2024-01-14T01:33:09,872 adding 'fibsem/imaging/_tile.py' 2024-01-14T01:33:09,874 adding 'fibsem/imaging/masks.py' 2024-01-14T01:33:09,875 adding 'fibsem/imaging/utils.py' 2024-01-14T01:33:09,877 adding 'fibsem/segmentation/README.md' 2024-01-14T01:33:09,879 adding 'fibsem/segmentation/__init__.py' 2024-01-14T01:33:09,881 adding 'fibsem/segmentation/_nnunet.py' 2024-01-14T01:33:09,882 adding 'fibsem/segmentation/augmentation.ipynb' 2024-01-14T01:33:09,883 adding 'fibsem/segmentation/config-autolamella-mega-v4-xl.yml' 2024-01-14T01:33:09,884 adding 'fibsem/segmentation/config-autolamella-mega-v4.yml' 2024-01-14T01:33:09,886 adding 'fibsem/segmentation/config-autolamella-mega-v5.yml' 2024-01-14T01:33:09,887 adding 'fibsem/segmentation/config-autolamella-serial-liftout-v1.yaml' 2024-01-14T01:33:09,888 adding 'fibsem/segmentation/config-autolamella-waffle4.yml' 2024-01-14T01:33:09,889 adding 'fibsem/segmentation/config.py' 2024-01-14T01:33:09,890 adding 'fibsem/segmentation/config.yml' 2024-01-14T01:33:09,892 adding 'fibsem/segmentation/dataset.py' 2024-01-14T01:33:09,903 adding 'fibsem/segmentation/example.ipynb' 2024-01-14T01:33:09,905 adding 'fibsem/segmentation/inference.py' 2024-01-14T01:33:09,906 adding 'fibsem/segmentation/model.py' 2024-01-14T01:33:09,908 adding 'fibsem/segmentation/nnunet_model.py' 2024-01-14T01:33:09,909 adding 'fibsem/segmentation/onnx_model.py' 2024-01-14T01:33:09,910 adding 'fibsem/segmentation/requirements.txt' 2024-01-14T01:33:09,911 adding 'fibsem/segmentation/sam_model.py' 2024-01-14T01:33:09,912 adding 'fibsem/segmentation/segmentation_config.yaml' 2024-01-14T01:33:10,063 adding 'fibsem/segmentation/test_image.tif' 2024-01-14T01:33:10,074 adding 'fibsem/segmentation/train.py' 2024-01-14T01:33:10,076 adding 'fibsem/segmentation/utils.py' 2024-01-14T01:33:10,438 adding 'fibsem/segmentation/docs/example_napari.png' 2024-01-14T01:33:10,599 adding 'fibsem/segmentation/docs/imgs/combined/combined.jpg' 2024-01-14T01:33:10,650 adding 'fibsem/segmentation/docs/imgs/labelled/label.tif' 2024-01-14T01:33:10,814 adding 'fibsem/segmentation/docs/imgs/raw/image.tif' 2024-01-14T01:33:10,824 adding 'fibsem/segmentation/models/.gitkeep' 2024-01-14T01:33:10,826 adding 'fibsem/tools/_parser.py' 2024-01-14T01:33:10,827 adding 'fibsem/tools/run_manipulator_calibration.py' 2024-01-14T01:33:10,828 adding 'fibsem/tools/run_split_dataset.py' 2024-01-14T01:33:10,830 adding 'fibsem/tools/telemetry.py' 2024-01-14T01:33:10,832 adding 'fibsem/ui/.gitkeep' 2024-01-14T01:33:10,833 adding 'fibsem/ui/FibsemAlignmentWidget.py' 2024-01-14T01:33:10,834 adding 'fibsem/ui/FibsemCryoSputterWidget.py' 2024-01-14T01:33:10,836 adding 'fibsem/ui/FibsemDetectionUI.py' 2024-01-14T01:33:10,838 adding 'fibsem/ui/FibsemDetectionWidget.py' 2024-01-14T01:33:10,840 adding 'fibsem/ui/FibsemEmbeddedDetectionWidget.py' 2024-01-14T01:33:10,843 adding 'fibsem/ui/FibsemFeatureLabellingUI.py' 2024-01-14T01:33:10,844 adding 'fibsem/ui/FibsemGISWidget.py' 2024-01-14T01:33:10,847 adding 'fibsem/ui/FibsemImageSettingsWidget.py' 2024-01-14T01:33:10,849 adding 'fibsem/ui/FibsemImageViewer.py' 2024-01-14T01:33:10,852 adding 'fibsem/ui/FibsemLabellingUI.py' 2024-01-14T01:33:10,854 adding 'fibsem/ui/FibsemManipulatorWidget.py' 2024-01-14T01:33:10,856 adding 'fibsem/ui/FibsemMicroscopeConfigurationWidget.py' 2024-01-14T01:33:10,860 adding 'fibsem/ui/FibsemMillingWidget.py' 2024-01-14T01:33:10,864 adding 'fibsem/ui/FibsemMinimapWidget.py' 2024-01-14T01:33:10,865 adding 'fibsem/ui/FibsemModelTrainingWidget.py' 2024-01-14T01:33:10,868 adding 'fibsem/ui/FibsemMovementWidget.py' 2024-01-14T01:33:10,869 adding 'fibsem/ui/FibsemMultiChemWidget.py' 2024-01-14T01:33:10,871 adding 'fibsem/ui/FibsemPositionsWidget.py' 2024-01-14T01:33:10,872 adding 'fibsem/ui/FibsemSegmentationModelWidget.py' 2024-01-14T01:33:10,874 adding 'fibsem/ui/FibsemSystemSetupWidget.py' 2024-01-14T01:33:10,876 adding 'fibsem/ui/FibsemUI.py' 2024-01-14T01:33:10,877 adding 'fibsem/ui/__init__.py' 2024-01-14T01:33:10,879 adding 'fibsem/ui/_stylesheets.py' 2024-01-14T01:33:10,882 adding 'fibsem/ui/utils.py' 2024-01-14T01:33:10,884 adding 'fibsem/ui/windows.py' 2024-01-14T01:33:10,887 adding 'fibsem/ui/qtdesigner_files/CurrentAlignmentWidget.py' 2024-01-14T01:33:10,888 adding 'fibsem/ui/qtdesigner_files/FibsemCryoSputterWidget.py' 2024-01-14T01:33:10,890 adding 'fibsem/ui/qtdesigner_files/FibsemDetectionWidget.py' 2024-01-14T01:33:10,891 adding 'fibsem/ui/qtdesigner_files/FibsemEmbeddedDetectionWidget.py' 2024-01-14T01:33:10,892 adding 'fibsem/ui/qtdesigner_files/FibsemFeatureDetectionUI.py' 2024-01-14T01:33:10,897 adding 'fibsem/ui/qtdesigner_files/FibsemGISWidget.py' 2024-01-14T01:33:10,898 adding 'fibsem/ui/qtdesigner_files/FibsemLabellingUI.py' 2024-01-14T01:33:10,900 adding 'fibsem/ui/qtdesigner_files/FibsemManipulatorWidget.py' 2024-01-14T01:33:10,903 adding 'fibsem/ui/qtdesigner_files/FibsemMicroscopeConfigurationWidget.py' 2024-01-14T01:33:10,905 adding 'fibsem/ui/qtdesigner_files/FibsemMillingWidget.py' 2024-01-14T01:33:10,907 adding 'fibsem/ui/qtdesigner_files/FibsemMinimapWidget.py' 2024-01-14T01:33:10,909 adding 'fibsem/ui/qtdesigner_files/FibsemModelTrainingWidget.py' 2024-01-14T01:33:10,911 adding 'fibsem/ui/qtdesigner_files/FibsemMovementWidget.py' 2024-01-14T01:33:10,912 adding 'fibsem/ui/qtdesigner_files/FibsemMultiChemWidget.py' 2024-01-14T01:33:10,913 adding 'fibsem/ui/qtdesigner_files/FibsemPositionsWidget.py' 2024-01-14T01:33:10,914 adding 'fibsem/ui/qtdesigner_files/FibsemSegmentationModelWidget.py' 2024-01-14T01:33:10,917 adding 'fibsem/ui/qtdesigner_files/FibsemSettingUI.py' 2024-01-14T01:33:10,919 adding 'fibsem/ui/qtdesigner_files/FibsemSettings.py' 2024-01-14T01:33:10,920 adding 'fibsem/ui/qtdesigner_files/FibsemSystemSetupWidget.py' 2024-01-14T01:33:10,921 adding 'fibsem/ui/qtdesigner_files/FibsemUI.py' 2024-01-14T01:33:10,923 adding 'fibsem/ui/qtdesigner_files/ImageSettingsWidget.py' 2024-01-14T01:33:10,925 adding 'fibsem/ui/qtdesigner_files/detection_dialog.py' 2024-01-14T01:33:10,927 adding 'fibsem/ui/qtdesigner_files/image_viewer.py' 2024-01-14T01:33:10,928 adding 'fibsem/ui/qtdesigner_files/needle_popup.py' 2024-01-14T01:33:10,930 adding 'fibsem/ui/qtdesigner_files/user_dialog.py' 2024-01-14T01:33:10,932 adding 'fibsem-0.3.0a1.dist-info/LICENSE' 2024-01-14T01:33:10,933 adding 'fibsem-0.3.0a1.dist-info/METADATA' 2024-01-14T01:33:10,934 adding 'fibsem-0.3.0a1.dist-info/WHEEL' 2024-01-14T01:33:10,935 adding 'fibsem-0.3.0a1.dist-info/entry_points.txt' 2024-01-14T01:33:10,936 adding 'fibsem-0.3.0a1.dist-info/top_level.txt' 2024-01-14T01:33:10,938 adding 'fibsem-0.3.0a1.dist-info/RECORD' 2024-01-14T01:33:11,030 removing build/bdist.linux-armv7l/wheel 2024-01-14T01:33:11,179 Building wheel for fibsem (setup.py): finished with status 'done' 2024-01-14T01:33:11,264 Created wheel for fibsem: filename=fibsem-0.3.0a1-py3-none-any.whl size=8451240 sha256=21ae6ee6be3ad2f8832a6d457a20aea2627a25340a672d8a42f9f0488d8a710c 2024-01-14T01:33:11,265 Stored in directory: /tmp/pip-ephem-wheel-cache-l9bap9ri/wheels/b6/60/09/37a4067cbfd735647eebb18216d53aed5149f1e299d2615d34 2024-01-14T01:33:11,283 Successfully built fibsem 2024-01-14T01:33:11,483 Removed build tracker: '/tmp/pip-build-tracker-aoap0ojz'