2024-01-17T06:48:44,470 Created temporary directory: /tmp/pip-build-tracker-teljinx8 2024-01-17T06:48:44,472 Initialized build tracking at /tmp/pip-build-tracker-teljinx8 2024-01-17T06:48:44,472 Created build tracker: /tmp/pip-build-tracker-teljinx8 2024-01-17T06:48:44,473 Entered build tracker: /tmp/pip-build-tracker-teljinx8 2024-01-17T06:48:44,473 Created temporary directory: /tmp/pip-wheel-0wwnh2gm 2024-01-17T06:48:44,477 Created temporary directory: /tmp/pip-ephem-wheel-cache-09w_c68d 2024-01-17T06:48:44,499 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-01-17T06:48:44,503 2 location(s) to search for versions of fibsem: 2024-01-17T06:48:44,503 * https://pypi.org/simple/fibsem/ 2024-01-17T06:48:44,503 * https://www.piwheels.org/simple/fibsem/ 2024-01-17T06:48:44,503 Fetching project page and analyzing links: https://pypi.org/simple/fibsem/ 2024-01-17T06:48:44,504 Getting page https://pypi.org/simple/fibsem/ 2024-01-17T06:48:44,506 Found index url https://pypi.org/simple/ 2024-01-17T06:48:44,645 Fetched page https://pypi.org/simple/fibsem/ as application/vnd.pypi.simple.v1+json 2024-01-17T06:48:44,649 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/4c/cf/0ed2a796e278cf9de3d52e287cc7d8d9892c21c0a00920a9ff30f5033a56/fibsem-0.2.1a0-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,649 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/ad/73/b8cf8db0dba6e191be400b025e534b4f6d7d18c39d86428101720ee58e4e/fibsem-0.2.1a1-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,650 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/d7/30/b93e42954d23659272a1b8ac6f3dd60da6eff0df55fc4d31bb515f6934eb/fibsem-0.2.2a0-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,651 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/c8/8f/4bfbe20bfa2ca615b74ad68a1317c1b61df9a93f5f8c9df9e223c9b20623/fibsem-0.2.2a1-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,651 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/7c/63/681df259de02d04424d8e71530649f0949504d5b31aaf5086651b5804d0c/fibsem-0.2.3a0-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,652 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/36/98/67400e49fe61d7e9e58d04099a516c039d4493a9ce346276a2cb37774dcd/fibsem-0.2.3-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,652 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/39/cc/5b8579067af3dc74509ceaba38d5117cde72f44a85ca8bcc56f5ebee7260/fibsem-0.2.4-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,653 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/43/13/625dba2d4741c02a3e6c970399a725b644b9a058dadb2f5fea9e9420b4e3/fibsem-0.2.5-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,653 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/87/1d/1562b356490f6c485f927c52d4b36e774bd5b9588d7a8da4a3dc9432db01/fibsem-0.3.0a0-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,654 Found link https://files.pythonhosted.org/packages/ad/3e/400c07e0574bbab09f711951db2f6ad3f367a8feff8f6cbafa7af89fd67a/fibsem-0.3.0a0.tar.gz (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9), version: 0.3.0a0 2024-01-17T06:48:44,655 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/df/fb/4bad22a49352a49befdb7d1513163de5d8d1a4cfb0e60fa3ac4c67f20482/fibsem-0.3.0a1-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,656 Found link https://files.pythonhosted.org/packages/4e/58/d870caa49f7754b016226db2b7f0ec101164622fc2e82511e7bae7f95af6/fibsem-0.3.0a1.tar.gz (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9), version: 0.3.0a1 2024-01-17T06:48:44,657 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/05/51/0a0cc14778c2ae7f68a601aa26821327fc35e08bc81546ba6e3d10bc704f/fibsem-0.3.0-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,658 Found link https://files.pythonhosted.org/packages/fc/2b/fea39a412194d35634c6d7f2e0768021aa0f024b880a17251a3f377e1c5c/fibsem-0.3.0.tar.gz (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9), version: 0.3.0 2024-01-17T06:48:44,658 Skipping link: No binaries permitted for fibsem: https://files.pythonhosted.org/packages/32/8b/d53be8a146bfa866e850b13e6b80977d4c1bc527852fc4d0c0cfe0b6fc56/fibsem-0.3.1-py3-none-any.whl (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,659 Found link https://files.pythonhosted.org/packages/52/84/03322d031fa283e8c468f6e706d59b3efe59dbb4e2341ffa012c5f68c127/fibsem-0.3.1.tar.gz (from https://pypi.org/simple/fibsem/) (requires-python:>=3.9), version: 0.3.1 2024-01-17T06:48:44,660 Fetching project page and analyzing links: https://www.piwheels.org/simple/fibsem/ 2024-01-17T06:48:44,660 Getting page https://www.piwheels.org/simple/fibsem/ 2024-01-17T06:48:44,661 Found index url https://www.piwheels.org/simple/ 2024-01-17T06:48:44,836 Fetched page https://www.piwheels.org/simple/fibsem/ as text/html 2024-01-17T06:48:44,838 Skipping link: No binaries permitted for fibsem: https://www.piwheels.org/simple/fibsem/fibsem-0.3.0-py3-none-any.whl#sha256=61d366cbae13eecb465c904050eba503bb875f93c6e743eedcfae3ca9cf5e2ac (from https://www.piwheels.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,839 Skipping link: No binaries permitted for fibsem: https://www.piwheels.org/simple/fibsem/fibsem-0.3.0a1-py3-none-any.whl#sha256=21ae6ee6be3ad2f8832a6d457a20aea2627a25340a672d8a42f9f0488d8a710c (from https://www.piwheels.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,839 Skipping link: No binaries permitted for fibsem: https://www.piwheels.org/simple/fibsem/fibsem-0.3.0a0-py3-none-any.whl#sha256=4e29ec9054961edc9242d2cb332c01000bcb0574069ad23261e41ac7f1489a4f (from https://www.piwheels.org/simple/fibsem/) (requires-python:>=3.9) 2024-01-17T06:48:44,840 Skipping link: not a file: https://www.piwheels.org/simple/fibsem/ 2024-01-17T06:48:44,841 Skipping link: not a file: https://pypi.org/simple/fibsem/ 2024-01-17T06:48:44,859 Given no hashes to check 1 links for project 'fibsem': discarding no candidates 2024-01-17T06:48:44,877 Collecting fibsem==0.3.1 2024-01-17T06:48:44,880 Created temporary directory: /tmp/pip-unpack-uuof0nbl 2024-01-17T06:48:45,095 Downloading fibsem-0.3.1.tar.gz (8.4 MB) 2024-01-17T06:48:47,037 Added fibsem==0.3.1 from https://files.pythonhosted.org/packages/52/84/03322d031fa283e8c468f6e706d59b3efe59dbb4e2341ffa012c5f68c127/fibsem-0.3.1.tar.gz to build tracker '/tmp/pip-build-tracker-teljinx8' 2024-01-17T06:48:47,039 Running setup.py (path:/tmp/pip-wheel-0wwnh2gm/fibsem_5e29f6d18f324c4d925755000e87e488/setup.py) egg_info for package fibsem 2024-01-17T06:48:47,040 Created temporary directory: /tmp/pip-pip-egg-info-yq614ssb 2024-01-17T06:48:47,041 Preparing metadata (setup.py): started 2024-01-17T06:48:47,042 Running command python setup.py egg_info 2024-01-17T06:48:48,136 running egg_info 2024-01-17T06:48:48,137 creating /tmp/pip-pip-egg-info-yq614ssb/fibsem.egg-info 2024-01-17T06:48:48,160 writing /tmp/pip-pip-egg-info-yq614ssb/fibsem.egg-info/PKG-INFO 2024-01-17T06:48:48,164 writing dependency_links to /tmp/pip-pip-egg-info-yq614ssb/fibsem.egg-info/dependency_links.txt 2024-01-17T06:48:48,166 writing entry points to /tmp/pip-pip-egg-info-yq614ssb/fibsem.egg-info/entry_points.txt 2024-01-17T06:48:48,168 writing requirements to /tmp/pip-pip-egg-info-yq614ssb/fibsem.egg-info/requires.txt 2024-01-17T06:48:48,169 writing top-level names to /tmp/pip-pip-egg-info-yq614ssb/fibsem.egg-info/top_level.txt 2024-01-17T06:48:48,170 writing manifest file '/tmp/pip-pip-egg-info-yq614ssb/fibsem.egg-info/SOURCES.txt' 2024-01-17T06:48:48,254 reading manifest file '/tmp/pip-pip-egg-info-yq614ssb/fibsem.egg-info/SOURCES.txt' 2024-01-17T06:48:48,256 reading manifest template 'MANIFEST.in' 2024-01-17T06:48:48,257 warning: no previously-included files matching '__pycache__' found under directory '*' 2024-01-17T06:48:48,258 warning: no previously-included files matching '*.py[co]' found under directory '*' 2024-01-17T06:48:48,259 warning: no previously-included files matching '*.ui' found under directory '*' 2024-01-17T06:48:48,259 adding license file 'LICENSE' 2024-01-17T06:48:48,262 writing manifest file '/tmp/pip-pip-egg-info-yq614ssb/fibsem.egg-info/SOURCES.txt' 2024-01-17T06:48:48,369 Preparing metadata (setup.py): finished with status 'done' 2024-01-17T06:48:48,374 Source in /tmp/pip-wheel-0wwnh2gm/fibsem_5e29f6d18f324c4d925755000e87e488 has version 0.3.1, which satisfies requirement fibsem==0.3.1 from https://files.pythonhosted.org/packages/52/84/03322d031fa283e8c468f6e706d59b3efe59dbb4e2341ffa012c5f68c127/fibsem-0.3.1.tar.gz 2024-01-17T06:48:48,374 Removed fibsem==0.3.1 from https://files.pythonhosted.org/packages/52/84/03322d031fa283e8c468f6e706d59b3efe59dbb4e2341ffa012c5f68c127/fibsem-0.3.1.tar.gz from build tracker '/tmp/pip-build-tracker-teljinx8' 2024-01-17T06:48:48,381 Created temporary directory: /tmp/pip-unpack-oin7rnr7 2024-01-17T06:48:48,382 Created temporary directory: /tmp/pip-unpack-5k9dgv9n 2024-01-17T06:48:48,412 Building wheels for collected packages: fibsem 2024-01-17T06:48:48,416 Created temporary directory: /tmp/pip-wheel-yqtihbsh 2024-01-17T06:48:48,416 Building wheel for fibsem (setup.py): started 2024-01-17T06:48:48,418 Destination directory: /tmp/pip-wheel-yqtihbsh 2024-01-17T06:48:48,418 Running command python setup.py bdist_wheel 2024-01-17T06:48:49,462 running bdist_wheel 2024-01-17T06:48:49,557 running build 2024-01-17T06:48:49,557 running build_py 2024-01-17T06:48:49,584 creating build 2024-01-17T06:48:49,584 creating build/lib 2024-01-17T06:48:49,585 creating build/lib/fibsem 2024-01-17T06:48:49,586 copying fibsem/_version.py -> build/lib/fibsem 2024-01-17T06:48:49,588 copying fibsem/structures.py -> build/lib/fibsem 2024-01-17T06:48:49,592 copying fibsem/validation.py -> build/lib/fibsem 2024-01-17T06:48:49,594 copying fibsem/configuration.py -> build/lib/fibsem 2024-01-17T06:48:49,596 copying fibsem/patterning.py -> build/lib/fibsem 2024-01-17T06:48:49,599 copying fibsem/milling.py -> build/lib/fibsem 2024-01-17T06:48:49,602 copying fibsem/microscope.py -> build/lib/fibsem 2024-01-17T06:48:49,607 copying fibsem/calibration.py -> build/lib/fibsem 2024-01-17T06:48:49,610 copying fibsem/__init__.py -> build/lib/fibsem 2024-01-17T06:48:49,611 copying fibsem/movement.py -> build/lib/fibsem 2024-01-17T06:48:49,613 copying fibsem/conversions.py -> build/lib/fibsem 2024-01-17T06:48:49,615 copying fibsem/acquire.py -> build/lib/fibsem 2024-01-17T06:48:49,617 copying fibsem/constants.py -> build/lib/fibsem 2024-01-17T06:48:49,618 copying fibsem/config.py -> build/lib/fibsem 2024-01-17T06:48:49,620 copying fibsem/gis.py -> build/lib/fibsem 2024-01-17T06:48:49,622 copying fibsem/alignment.py -> build/lib/fibsem 2024-01-17T06:48:49,625 copying fibsem/utils.py -> build/lib/fibsem 2024-01-17T06:48:49,628 creating build/lib/fibsem/segmentation 2024-01-17T06:48:49,629 copying fibsem/segmentation/inference.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,631 copying fibsem/segmentation/dataset.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,633 copying fibsem/segmentation/onnx_model.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,635 copying fibsem/segmentation/train.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,637 copying fibsem/segmentation/_nnunet.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,639 copying fibsem/segmentation/__init__.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,640 copying fibsem/segmentation/nnunet_model.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,642 copying fibsem/segmentation/sam_model.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,644 copying fibsem/segmentation/config.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,646 copying fibsem/segmentation/model.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,648 copying fibsem/segmentation/utils.py -> build/lib/fibsem/segmentation 2024-01-17T06:48:49,651 creating build/lib/fibsem/ui 2024-01-17T06:48:49,651 copying fibsem/ui/FibsemLabellingUI.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,654 copying fibsem/ui/FibsemMovementWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,656 copying fibsem/ui/FibsemModelTrainingWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,659 copying fibsem/ui/FibsemAlignmentWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,660 copying fibsem/ui/FibsemMicroscopeConfigurationWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,663 copying fibsem/ui/FibsemDetectionWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,665 copying fibsem/ui/FibsemMinimapWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,668 copying fibsem/ui/FibsemPositionsWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,670 copying fibsem/ui/FibsemEmbeddedDetectionWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,672 copying fibsem/ui/FibsemImageSettingsWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,674 copying fibsem/ui/FibsemMillingWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,677 copying fibsem/ui/__init__.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,679 copying fibsem/ui/_stylesheets.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,680 copying fibsem/ui/FibsemCryoDepositionWidget_qt.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,683 copying fibsem/ui/FibsemCryoDepositionWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,684 copying fibsem/ui/FibsemGISWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,686 copying fibsem/ui/FibsemUI.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,689 copying fibsem/ui/FibsemFeatureLabellingUI.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,691 copying fibsem/ui/FibsemImageViewer.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,693 copying fibsem/ui/windows.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,695 copying fibsem/ui/FibsemSystemSetupWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,697 copying fibsem/ui/FibsemDetectionUI.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,699 copying fibsem/ui/FibsemSegmentationModelWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,701 copying fibsem/ui/FibsemMultiChemWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,703 copying fibsem/ui/utils.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,706 copying fibsem/ui/FibsemManipulatorWidget.py -> build/lib/fibsem/ui 2024-01-17T06:48:49,708 creating build/lib/fibsem/detection 2024-01-17T06:48:49,709 copying fibsem/detection/detection.py -> build/lib/fibsem/detection 2024-01-17T06:48:49,712 copying fibsem/detection/run_evaluation.py -> build/lib/fibsem/detection 2024-01-17T06:48:49,714 copying fibsem/detection/__init__.py -> build/lib/fibsem/detection 2024-01-17T06:48:49,715 copying fibsem/detection/utils.py -> build/lib/fibsem/detection 2024-01-17T06:48:49,717 copying fibsem/detection/evaluation.py -> build/lib/fibsem/detection 2024-01-17T06:48:49,720 creating build/lib/fibsem/imaging 2024-01-17T06:48:49,721 copying fibsem/imaging/__init__.py -> build/lib/fibsem/imaging 2024-01-17T06:48:49,723 copying fibsem/imaging/_tile.py -> build/lib/fibsem/imaging 2024-01-17T06:48:49,725 copying fibsem/imaging/masks.py -> build/lib/fibsem/imaging 2024-01-17T06:48:49,727 copying fibsem/imaging/utils.py -> build/lib/fibsem/imaging 2024-01-17T06:48:49,728 running egg_info 2024-01-17T06:48:49,782 writing fibsem.egg-info/PKG-INFO 2024-01-17T06:48:49,786 writing dependency_links to fibsem.egg-info/dependency_links.txt 2024-01-17T06:48:49,788 writing entry points to fibsem.egg-info/entry_points.txt 2024-01-17T06:48:49,789 writing requirements to fibsem.egg-info/requires.txt 2024-01-17T06:48:49,790 writing top-level names to fibsem.egg-info/top_level.txt 2024-01-17T06:48:49,825 reading manifest file 'fibsem.egg-info/SOURCES.txt' 2024-01-17T06:48:49,835 reading manifest template 'MANIFEST.in' 2024-01-17T06:48:49,837 warning: no previously-included files matching '__pycache__' found under directory '*' 2024-01-17T06:48:49,838 warning: no previously-included files matching '*.py[co]' found under directory '*' 2024-01-17T06:48:49,839 warning: no previously-included files matching '*.ui' found under directory '*' 2024-01-17T06:48:49,839 adding license file 'LICENSE' 2024-01-17T06:48:49,846 writing manifest file 'fibsem.egg-info/SOURCES.txt' 2024-01-17T06:48:49,849 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.chat' is absent from the `packages` configuration. 2024-01-17T06:48:49,850 !! 2024-01-17T06:48:49,851 ******************************************************************************** 2024-01-17T06:48:49,851 ############################ 2024-01-17T06:48:49,851 # Package would be ignored # 2024-01-17T06:48:49,852 ############################ 2024-01-17T06:48:49,852 Python recognizes 'fibsem.chat' as an importable package[^1], 2024-01-17T06:48:49,853 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:49,854 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:49,854 package, please make sure that 'fibsem.chat' is explicitly added 2024-01-17T06:48:49,855 to the `packages` configuration field. 2024-01-17T06:48:49,856 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:49,856 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:49,857 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:49,859 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:49,863 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:49,865 If you don't want 'fibsem.chat' to be distributed and are 2024-01-17T06:48:49,865 already explicitly excluding 'fibsem.chat' via 2024-01-17T06:48:49,866 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:49,866 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:49,867 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:49,868 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:49,869 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:49,870 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:49,871 even if it does not contain any `.py` files. 2024-01-17T06:48:49,871 On the other hand, currently there is no concept of package data 2024-01-17T06:48:49,872 directory, all directories are treated like packages. 2024-01-17T06:48:49,872 ******************************************************************************** 2024-01-17T06:48:49,873 !! 2024-01-17T06:48:49,874 check.warn(importable) 2024-01-17T06:48:49,874 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.config' is absent from the `packages` configuration. 2024-01-17T06:48:49,875 !! 2024-01-17T06:48:49,876 ******************************************************************************** 2024-01-17T06:48:49,876 ############################ 2024-01-17T06:48:49,877 # Package would be ignored # 2024-01-17T06:48:49,877 ############################ 2024-01-17T06:48:49,878 Python recognizes 'fibsem.config' as an importable package[^1], 2024-01-17T06:48:49,878 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:49,879 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:49,879 package, please make sure that 'fibsem.config' is explicitly added 2024-01-17T06:48:49,880 to the `packages` configuration field. 2024-01-17T06:48:49,881 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:49,881 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:49,881 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:49,882 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:49,883 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:49,884 If you don't want 'fibsem.config' to be distributed and are 2024-01-17T06:48:49,884 already explicitly excluding 'fibsem.config' via 2024-01-17T06:48:49,885 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:49,885 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:49,886 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:49,887 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:49,888 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:49,889 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:49,889 even if it does not contain any `.py` files. 2024-01-17T06:48:49,890 On the other hand, currently there is no concept of package data 2024-01-17T06:48:49,890 directory, all directories are treated like packages. 2024-01-17T06:48:49,891 ******************************************************************************** 2024-01-17T06:48:49,892 !! 2024-01-17T06:48:49,892 check.warn(importable) 2024-01-17T06:48:49,892 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.db' is absent from the `packages` configuration. 2024-01-17T06:48:49,893 !! 2024-01-17T06:48:49,894 ******************************************************************************** 2024-01-17T06:48:49,894 ############################ 2024-01-17T06:48:49,895 # Package would be ignored # 2024-01-17T06:48:49,895 ############################ 2024-01-17T06:48:49,896 Python recognizes 'fibsem.db' as an importable package[^1], 2024-01-17T06:48:49,896 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:49,897 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:49,898 package, please make sure that 'fibsem.db' is explicitly added 2024-01-17T06:48:49,898 to the `packages` configuration field. 2024-01-17T06:48:49,899 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:49,900 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:49,900 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:49,901 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:49,903 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:49,904 If you don't want 'fibsem.db' to be distributed and are 2024-01-17T06:48:49,904 already explicitly excluding 'fibsem.db' via 2024-01-17T06:48:49,905 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:49,905 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:49,906 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:49,907 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:49,907 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:49,909 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:49,909 even if it does not contain any `.py` files. 2024-01-17T06:48:49,909 On the other hand, currently there is no concept of package data 2024-01-17T06:48:49,910 directory, all directories are treated like packages. 2024-01-17T06:48:49,910 ******************************************************************************** 2024-01-17T06:48:49,911 !! 2024-01-17T06:48:49,911 check.warn(importable) 2024-01-17T06:48:49,912 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.detection.test_images' is absent from the `packages` configuration. 2024-01-17T06:48:49,912 !! 2024-01-17T06:48:49,913 ******************************************************************************** 2024-01-17T06:48:49,913 ############################ 2024-01-17T06:48:49,914 # Package would be ignored # 2024-01-17T06:48:49,914 ############################ 2024-01-17T06:48:49,915 Python recognizes 'fibsem.detection.test_images' as an importable package[^1], 2024-01-17T06:48:49,915 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:49,916 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:49,916 package, please make sure that 'fibsem.detection.test_images' is explicitly added 2024-01-17T06:48:49,917 to the `packages` configuration field. 2024-01-17T06:48:49,918 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:49,918 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:49,919 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:49,920 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:49,921 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:49,922 If you don't want 'fibsem.detection.test_images' to be distributed and are 2024-01-17T06:48:49,922 already explicitly excluding 'fibsem.detection.test_images' via 2024-01-17T06:48:49,923 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:49,923 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:49,924 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:49,925 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:49,926 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:49,928 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:49,928 even if it does not contain any `.py` files. 2024-01-17T06:48:49,929 On the other hand, currently there is no concept of package data 2024-01-17T06:48:49,929 directory, all directories are treated like packages. 2024-01-17T06:48:49,930 ******************************************************************************** 2024-01-17T06:48:49,931 !! 2024-01-17T06:48:49,931 check.warn(importable) 2024-01-17T06:48:49,932 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.detection.test_images.serial' is absent from the `packages` configuration. 2024-01-17T06:48:49,933 !! 2024-01-17T06:48:49,934 ******************************************************************************** 2024-01-17T06:48:49,935 ############################ 2024-01-17T06:48:49,935 # Package would be ignored # 2024-01-17T06:48:49,935 ############################ 2024-01-17T06:48:49,936 Python recognizes 'fibsem.detection.test_images.serial' as an importable package[^1], 2024-01-17T06:48:49,936 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:49,937 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:49,937 package, please make sure that 'fibsem.detection.test_images.serial' is explicitly added 2024-01-17T06:48:49,938 to the `packages` configuration field. 2024-01-17T06:48:49,939 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:49,939 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:49,940 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:49,941 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:49,942 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:49,943 If you don't want 'fibsem.detection.test_images.serial' to be distributed and are 2024-01-17T06:48:49,943 already explicitly excluding 'fibsem.detection.test_images.serial' via 2024-01-17T06:48:49,944 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:49,944 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:49,945 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:49,946 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:49,947 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:49,949 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:49,950 even if it does not contain any `.py` files. 2024-01-17T06:48:49,951 On the other hand, currently there is no concept of package data 2024-01-17T06:48:49,951 directory, all directories are treated like packages. 2024-01-17T06:48:49,952 ******************************************************************************** 2024-01-17T06:48:49,956 !! 2024-01-17T06:48:49,957 check.warn(importable) 2024-01-17T06:48:49,959 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.docs' is absent from the `packages` configuration. 2024-01-17T06:48:49,960 !! 2024-01-17T06:48:49,965 ******************************************************************************** 2024-01-17T06:48:49,969 ############################ 2024-01-17T06:48:49,970 # Package would be ignored # 2024-01-17T06:48:49,970 ############################ 2024-01-17T06:48:49,971 Python recognizes 'fibsem.segmentation.docs' as an importable package[^1], 2024-01-17T06:48:49,971 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:49,973 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:49,973 package, please make sure that 'fibsem.segmentation.docs' is explicitly added 2024-01-17T06:48:49,974 to the `packages` configuration field. 2024-01-17T06:48:49,975 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:49,976 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:49,976 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:49,978 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:49,979 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:49,980 If you don't want 'fibsem.segmentation.docs' to be distributed and are 2024-01-17T06:48:49,980 already explicitly excluding 'fibsem.segmentation.docs' via 2024-01-17T06:48:49,981 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:49,981 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:49,981 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:49,982 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:49,983 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:49,985 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:49,985 even if it does not contain any `.py` files. 2024-01-17T06:48:49,985 On the other hand, currently there is no concept of package data 2024-01-17T06:48:49,986 directory, all directories are treated like packages. 2024-01-17T06:48:49,992 ******************************************************************************** 2024-01-17T06:48:49,997 !! 2024-01-17T06:48:50,004 check.warn(importable) 2024-01-17T06:48:50,018 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.docs.imgs.combined' is absent from the `packages` configuration. 2024-01-17T06:48:50,020 !! 2024-01-17T06:48:50,021 ******************************************************************************** 2024-01-17T06:48:50,022 ############################ 2024-01-17T06:48:50,023 # Package would be ignored # 2024-01-17T06:48:50,023 ############################ 2024-01-17T06:48:50,024 Python recognizes 'fibsem.segmentation.docs.imgs.combined' as an importable package[^1], 2024-01-17T06:48:50,024 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:50,025 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:50,026 package, please make sure that 'fibsem.segmentation.docs.imgs.combined' is explicitly added 2024-01-17T06:48:50,026 to the `packages` configuration field. 2024-01-17T06:48:50,027 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:50,028 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:50,028 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:50,030 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:50,031 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:50,032 If you don't want 'fibsem.segmentation.docs.imgs.combined' to be distributed and are 2024-01-17T06:48:50,032 already explicitly excluding 'fibsem.segmentation.docs.imgs.combined' via 2024-01-17T06:48:50,033 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:50,033 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:50,034 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:50,040 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:50,045 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:50,047 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:50,048 even if it does not contain any `.py` files. 2024-01-17T06:48:50,048 On the other hand, currently there is no concept of package data 2024-01-17T06:48:50,050 directory, all directories are treated like packages. 2024-01-17T06:48:50,050 ******************************************************************************** 2024-01-17T06:48:50,055 !! 2024-01-17T06:48:50,055 check.warn(importable) 2024-01-17T06:48:50,056 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.docs.imgs.labelled' is absent from the `packages` configuration. 2024-01-17T06:48:50,056 !! 2024-01-17T06:48:50,057 ******************************************************************************** 2024-01-17T06:48:50,061 ############################ 2024-01-17T06:48:50,063 # Package would be ignored # 2024-01-17T06:48:50,064 ############################ 2024-01-17T06:48:50,065 Python recognizes 'fibsem.segmentation.docs.imgs.labelled' as an importable package[^1], 2024-01-17T06:48:50,066 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:50,073 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:50,074 package, please make sure that 'fibsem.segmentation.docs.imgs.labelled' is explicitly added 2024-01-17T06:48:50,075 to the `packages` configuration field. 2024-01-17T06:48:50,076 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:50,077 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:50,077 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:50,079 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:50,080 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:50,081 If you don't want 'fibsem.segmentation.docs.imgs.labelled' to be distributed and are 2024-01-17T06:48:50,082 already explicitly excluding 'fibsem.segmentation.docs.imgs.labelled' via 2024-01-17T06:48:50,083 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:50,083 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:50,084 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:50,085 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:50,087 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:50,089 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:50,090 even if it does not contain any `.py` files. 2024-01-17T06:48:50,091 On the other hand, currently there is no concept of package data 2024-01-17T06:48:50,092 directory, all directories are treated like packages. 2024-01-17T06:48:50,092 ******************************************************************************** 2024-01-17T06:48:50,094 !! 2024-01-17T06:48:50,095 check.warn(importable) 2024-01-17T06:48:50,095 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.docs.imgs.raw' is absent from the `packages` configuration. 2024-01-17T06:48:50,096 !! 2024-01-17T06:48:50,098 ******************************************************************************** 2024-01-17T06:48:50,098 ############################ 2024-01-17T06:48:50,099 # Package would be ignored # 2024-01-17T06:48:50,100 ############################ 2024-01-17T06:48:50,100 Python recognizes 'fibsem.segmentation.docs.imgs.raw' as an importable package[^1], 2024-01-17T06:48:50,101 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:50,105 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:50,108 package, please make sure that 'fibsem.segmentation.docs.imgs.raw' is explicitly added 2024-01-17T06:48:50,109 to the `packages` configuration field. 2024-01-17T06:48:50,111 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:50,111 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:50,112 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:50,113 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:50,114 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:50,115 If you don't want 'fibsem.segmentation.docs.imgs.raw' to be distributed and are 2024-01-17T06:48:50,115 already explicitly excluding 'fibsem.segmentation.docs.imgs.raw' via 2024-01-17T06:48:50,115 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:50,116 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:50,116 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:50,117 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:50,118 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:50,120 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:50,120 even if it does not contain any `.py` files. 2024-01-17T06:48:50,121 On the other hand, currently there is no concept of package data 2024-01-17T06:48:50,121 directory, all directories are treated like packages. 2024-01-17T06:48:50,122 ******************************************************************************** 2024-01-17T06:48:50,123 !! 2024-01-17T06:48:50,123 check.warn(importable) 2024-01-17T06:48:50,124 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.segmentation.models' is absent from the `packages` configuration. 2024-01-17T06:48:50,125 !! 2024-01-17T06:48:50,126 ******************************************************************************** 2024-01-17T06:48:50,126 ############################ 2024-01-17T06:48:50,127 # Package would be ignored # 2024-01-17T06:48:50,127 ############################ 2024-01-17T06:48:50,128 Python recognizes 'fibsem.segmentation.models' as an importable package[^1], 2024-01-17T06:48:50,128 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:50,129 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:50,130 package, please make sure that 'fibsem.segmentation.models' is explicitly added 2024-01-17T06:48:50,130 to the `packages` configuration field. 2024-01-17T06:48:50,131 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:50,132 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:50,132 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:50,133 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:50,134 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:50,135 If you don't want 'fibsem.segmentation.models' to be distributed and are 2024-01-17T06:48:50,136 already explicitly excluding 'fibsem.segmentation.models' via 2024-01-17T06:48:50,136 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:50,137 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:50,138 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:50,140 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:50,140 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:50,142 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:50,143 even if it does not contain any `.py` files. 2024-01-17T06:48:50,143 On the other hand, currently there is no concept of package data 2024-01-17T06:48:50,144 directory, all directories are treated like packages. 2024-01-17T06:48:50,144 ******************************************************************************** 2024-01-17T06:48:50,145 !! 2024-01-17T06:48:50,146 check.warn(importable) 2024-01-17T06:48:50,146 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.tools' is absent from the `packages` configuration. 2024-01-17T06:48:50,147 !! 2024-01-17T06:48:50,148 ******************************************************************************** 2024-01-17T06:48:50,148 ############################ 2024-01-17T06:48:50,149 # Package would be ignored # 2024-01-17T06:48:50,149 ############################ 2024-01-17T06:48:50,150 Python recognizes 'fibsem.tools' as an importable package[^1], 2024-01-17T06:48:50,150 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:50,151 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:50,152 package, please make sure that 'fibsem.tools' is explicitly added 2024-01-17T06:48:50,152 to the `packages` configuration field. 2024-01-17T06:48:50,153 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:50,154 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:50,155 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:50,156 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:50,157 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:50,158 If you don't want 'fibsem.tools' to be distributed and are 2024-01-17T06:48:50,159 already explicitly excluding 'fibsem.tools' via 2024-01-17T06:48:50,159 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:50,159 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:50,160 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:50,161 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:50,162 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:50,163 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:50,164 even if it does not contain any `.py` files. 2024-01-17T06:48:50,164 On the other hand, currently there is no concept of package data 2024-01-17T06:48:50,165 directory, all directories are treated like packages. 2024-01-17T06:48:50,166 ******************************************************************************** 2024-01-17T06:48:50,167 !! 2024-01-17T06:48:50,167 check.warn(importable) 2024-01-17T06:48:50,168 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'fibsem.ui.qtdesigner_files' is absent from the `packages` configuration. 2024-01-17T06:48:50,169 !! 2024-01-17T06:48:50,170 ******************************************************************************** 2024-01-17T06:48:50,170 ############################ 2024-01-17T06:48:50,171 # Package would be ignored # 2024-01-17T06:48:50,172 ############################ 2024-01-17T06:48:50,172 Python recognizes 'fibsem.ui.qtdesigner_files' as an importable package[^1], 2024-01-17T06:48:50,173 but it is absent from setuptools' `packages` configuration. 2024-01-17T06:48:50,174 This leads to an ambiguous overall configuration. If you want to distribute this 2024-01-17T06:48:50,175 package, please make sure that 'fibsem.ui.qtdesigner_files' is explicitly added 2024-01-17T06:48:50,175 to the `packages` configuration field. 2024-01-17T06:48:50,176 Alternatively, you can also rely on setuptools' discovery methods 2024-01-17T06:48:50,177 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-01-17T06:48:50,177 instead of `find_packages(...)`/`find:`). 2024-01-17T06:48:50,178 You can read more about "package discovery" on setuptools documentation page: 2024-01-17T06:48:50,179 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-01-17T06:48:50,180 If you don't want 'fibsem.ui.qtdesigner_files' to be distributed and are 2024-01-17T06:48:50,180 already explicitly excluding 'fibsem.ui.qtdesigner_files' via 2024-01-17T06:48:50,181 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-01-17T06:48:50,181 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-01-17T06:48:50,182 combination with a more fine grained `package-data` configuration. 2024-01-17T06:48:50,183 You can read more about "package data files" on setuptools documentation page: 2024-01-17T06:48:50,184 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-01-17T06:48:50,186 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-01-17T06:48:50,187 even if it does not contain any `.py` files. 2024-01-17T06:48:50,187 On the other hand, currently there is no concept of package data 2024-01-17T06:48:50,188 directory, all directories are treated like packages. 2024-01-17T06:48:50,188 ******************************************************************************** 2024-01-17T06:48:50,193 !! 2024-01-17T06:48:50,202 check.warn(importable) 2024-01-17T06:48:50,205 creating build/lib/fibsem/chat 2024-01-17T06:48:50,206 copying fibsem/chat/.gitignore -> build/lib/fibsem/chat 2024-01-17T06:48:50,206 copying fibsem/chat/main.py -> build/lib/fibsem/chat 2024-01-17T06:48:50,207 copying fibsem/chat/requirements.txt -> build/lib/fibsem/chat 2024-01-17T06:48:50,207 creating build/lib/fibsem/config 2024-01-17T06:48:50,208 copying fibsem/config/deposition.dbp -> build/lib/fibsem/config 2024-01-17T06:48:50,208 copying fibsem/config/microscope-configuration.yaml -> build/lib/fibsem/config 2024-01-17T06:48:50,209 copying fibsem/config/positions.yaml -> build/lib/fibsem/config 2024-01-17T06:48:50,210 copying fibsem/config/protocol.yaml -> build/lib/fibsem/config 2024-01-17T06:48:50,210 copying fibsem/config/system.yaml -> build/lib/fibsem/config 2024-01-17T06:48:50,211 copying fibsem/config/user-configurations.yaml -> build/lib/fibsem/config 2024-01-17T06:48:50,211 creating build/lib/fibsem/db 2024-01-17T06:48:50,212 copying fibsem/db/app.py -> build/lib/fibsem/db 2024-01-17T06:48:50,212 copying fibsem/db/config.yaml -> build/lib/fibsem/db 2024-01-17T06:48:50,213 copying fibsem/db/notebook.ipynb -> build/lib/fibsem/db 2024-01-17T06:48:50,213 copying fibsem/db/util.py -> build/lib/fibsem/db 2024-01-17T06:48:50,214 creating build/lib/fibsem/tools 2024-01-17T06:48:50,214 copying fibsem/tools/_parser.py -> build/lib/fibsem/tools 2024-01-17T06:48:50,215 copying fibsem/tools/run_manipulator_calibration.py -> build/lib/fibsem/tools 2024-01-17T06:48:50,215 copying fibsem/tools/run_split_dataset.py -> build/lib/fibsem/tools 2024-01-17T06:48:50,216 copying fibsem/tools/telemetry.py -> build/lib/fibsem/tools 2024-01-17T06:48:50,217 copying fibsem/segmentation/README.md -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,217 copying fibsem/segmentation/augmentation.ipynb -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,218 copying fibsem/segmentation/config-autolamella-mega-v4-xl.yml -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,218 copying fibsem/segmentation/config-autolamella-mega-v4.yml -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,219 copying fibsem/segmentation/config-autolamella-mega-v5.yml -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,219 copying fibsem/segmentation/config-autolamella-serial-liftout-v1.yaml -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,220 copying fibsem/segmentation/config-autolamella-waffle4.yml -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,220 copying fibsem/segmentation/config.yml -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,221 copying fibsem/segmentation/example.ipynb -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,221 copying fibsem/segmentation/requirements.txt -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,222 copying fibsem/segmentation/segmentation_config.yaml -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,222 copying fibsem/segmentation/test_image.tif -> build/lib/fibsem/segmentation 2024-01-17T06:48:50,223 creating build/lib/fibsem/segmentation/docs 2024-01-17T06:48:50,223 copying fibsem/segmentation/docs/example_napari.png -> build/lib/fibsem/segmentation/docs 2024-01-17T06:48:50,224 creating build/lib/fibsem/segmentation/docs/imgs 2024-01-17T06:48:50,224 creating build/lib/fibsem/segmentation/docs/imgs/combined 2024-01-17T06:48:50,225 copying fibsem/segmentation/docs/imgs/combined/combined.jpg -> build/lib/fibsem/segmentation/docs/imgs/combined 2024-01-17T06:48:50,225 creating build/lib/fibsem/segmentation/docs/imgs/labelled 2024-01-17T06:48:50,226 copying fibsem/segmentation/docs/imgs/labelled/label.tif -> build/lib/fibsem/segmentation/docs/imgs/labelled 2024-01-17T06:48:50,226 creating build/lib/fibsem/segmentation/docs/imgs/raw 2024-01-17T06:48:50,227 copying fibsem/segmentation/docs/imgs/raw/image.tif -> build/lib/fibsem/segmentation/docs/imgs/raw 2024-01-17T06:48:50,228 creating build/lib/fibsem/segmentation/models 2024-01-17T06:48:50,228 copying fibsem/segmentation/models/.gitkeep -> build/lib/fibsem/segmentation/models 2024-01-17T06:48:50,229 copying fibsem/ui/.gitkeep -> build/lib/fibsem/ui 2024-01-17T06:48:50,229 creating build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,230 copying fibsem/ui/qtdesigner_files/CurrentAlignmentWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,230 copying fibsem/ui/qtdesigner_files/FibsemDetectionWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,231 copying fibsem/ui/qtdesigner_files/FibsemEmbeddedDetectionWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,231 copying fibsem/ui/qtdesigner_files/FibsemFeatureDetectionUI.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,232 copying fibsem/ui/qtdesigner_files/FibsemGISWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,232 copying fibsem/ui/qtdesigner_files/FibsemLabellingUI.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,233 copying fibsem/ui/qtdesigner_files/FibsemManipulatorWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,234 copying fibsem/ui/qtdesigner_files/FibsemMicroscopeConfigurationWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,234 copying fibsem/ui/qtdesigner_files/FibsemMillingWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,235 copying fibsem/ui/qtdesigner_files/FibsemMinimapWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,235 copying fibsem/ui/qtdesigner_files/FibsemModelTrainingWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,236 copying fibsem/ui/qtdesigner_files/FibsemMovementWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,237 copying fibsem/ui/qtdesigner_files/FibsemMultiChemWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,237 copying fibsem/ui/qtdesigner_files/FibsemPositionsWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,238 copying fibsem/ui/qtdesigner_files/FibsemSegmentationModelWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,239 copying fibsem/ui/qtdesigner_files/FibsemSystemSetupWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,239 copying fibsem/ui/qtdesigner_files/FibsemUI.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,239 copying fibsem/ui/qtdesigner_files/ImageSettingsWidget.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,240 copying fibsem/ui/qtdesigner_files/detection_dialog.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,241 copying fibsem/ui/qtdesigner_files/image_viewer.py -> build/lib/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,241 copying fibsem/detection/config-autolamella-serial-liftout.yaml -> build/lib/fibsem/detection 2024-01-17T06:48:50,241 copying fibsem/detection/config-autolamella-waffle.yml -> build/lib/fibsem/detection 2024-01-17T06:48:50,242 copying fibsem/detection/config-autoliftout-dm-embryo.yml -> build/lib/fibsem/detection 2024-01-17T06:48:50,243 copying fibsem/detection/test_image.tif -> build/lib/fibsem/detection 2024-01-17T06:48:50,243 creating build/lib/fibsem/detection/test_images 2024-01-17T06:48:50,243 copying fibsem/detection/test_images/test_needle_mask.tif -> build/lib/fibsem/detection/test_images 2024-01-17T06:48:50,244 copying fibsem/detection/test_images/test_needle_mask2.tif -> build/lib/fibsem/detection/test_images 2024-01-17T06:48:50,244 copying fibsem/detection/test_images/test_needle_mask3.tif -> build/lib/fibsem/detection/test_images 2024-01-17T06:48:50,245 creating build/lib/fibsem/detection/test_images/serial 2024-01-17T06:48:50,246 copying fibsem/detection/test_images/serial/serial_liftout_mask_00.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-17T06:48:50,246 copying fibsem/detection/test_images/serial/serial_liftout_mask_01.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-17T06:48:50,247 copying fibsem/detection/test_images/serial/serial_liftout_mask_02.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-17T06:48:50,247 copying fibsem/detection/test_images/serial/serial_liftout_mask_03.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-17T06:48:50,248 copying fibsem/detection/test_images/serial/serial_liftout_mask_04.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-17T06:48:50,249 copying fibsem/detection/test_images/serial/serial_liftout_mask_05.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-17T06:48:50,249 copying fibsem/detection/test_images/serial/serial_liftout_mask_06.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-17T06:48:50,250 copying fibsem/detection/test_images/serial/serial_liftout_mask_07.tif -> build/lib/fibsem/detection/test_images/serial 2024-01-17T06:48:50,250 copying fibsem/imaging/.gitkeep -> build/lib/fibsem/imaging 2024-01-17T06:48:50,277 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-01-17T06:48:50,278 !! 2024-01-17T06:48:50,279 ******************************************************************************** 2024-01-17T06:48:50,280 Please avoid running ``setup.py`` directly. 2024-01-17T06:48:50,281 Instead, use pypa/build, pypa/installer or other 2024-01-17T06:48:50,281 standards-based tools. 2024-01-17T06:48:50,283 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-01-17T06:48:50,283 ******************************************************************************** 2024-01-17T06:48:50,285 !! 2024-01-17T06:48:50,286 self.initialize_options() 2024-01-17T06:48:50,312 installing to build/bdist.linux-armv7l/wheel 2024-01-17T06:48:50,313 running install 2024-01-17T06:48:50,348 running install_lib 2024-01-17T06:48:50,375 creating build/bdist.linux-armv7l 2024-01-17T06:48:50,376 creating build/bdist.linux-armv7l/wheel 2024-01-17T06:48:50,377 creating build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,379 creating build/bdist.linux-armv7l/wheel/fibsem/chat 2024-01-17T06:48:50,380 copying build/lib/fibsem/chat/.gitignore -> build/bdist.linux-armv7l/wheel/fibsem/chat 2024-01-17T06:48:50,381 copying build/lib/fibsem/chat/requirements.txt -> build/bdist.linux-armv7l/wheel/fibsem/chat 2024-01-17T06:48:50,383 copying build/lib/fibsem/chat/main.py -> build/bdist.linux-armv7l/wheel/fibsem/chat 2024-01-17T06:48:50,385 copying build/lib/fibsem/_version.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,387 copying build/lib/fibsem/structures.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,391 copying build/lib/fibsem/validation.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,393 copying build/lib/fibsem/configuration.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,396 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,397 copying build/lib/fibsem/segmentation/test_image.tif -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,426 copying build/lib/fibsem/segmentation/inference.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,428 copying build/lib/fibsem/segmentation/config-autolamella-mega-v4.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,430 copying build/lib/fibsem/segmentation/dataset.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,432 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs 2024-01-17T06:48:50,433 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs 2024-01-17T06:48:50,435 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/raw 2024-01-17T06:48:50,436 copying build/lib/fibsem/segmentation/docs/imgs/raw/image.tif -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/raw 2024-01-17T06:48:50,459 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/labelled 2024-01-17T06:48:50,460 copying build/lib/fibsem/segmentation/docs/imgs/labelled/label.tif -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/labelled 2024-01-17T06:48:50,488 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/combined 2024-01-17T06:48:50,488 copying build/lib/fibsem/segmentation/docs/imgs/combined/combined.jpg -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs/imgs/combined 2024-01-17T06:48:50,509 copying build/lib/fibsem/segmentation/docs/example_napari.png -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/docs 2024-01-17T06:48:50,555 copying build/lib/fibsem/segmentation/onnx_model.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,557 copying build/lib/fibsem/segmentation/train.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,559 copying build/lib/fibsem/segmentation/config-autolamella-serial-liftout-v1.yaml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,561 copying build/lib/fibsem/segmentation/_nnunet.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,564 copying build/lib/fibsem/segmentation/README.md -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,566 copying build/lib/fibsem/segmentation/config-autolamella-mega-v5.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,568 copying build/lib/fibsem/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,570 copying build/lib/fibsem/segmentation/config.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,572 copying build/lib/fibsem/segmentation/config-autolamella-mega-v4-xl.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,574 copying build/lib/fibsem/segmentation/nnunet_model.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,576 copying build/lib/fibsem/segmentation/segmentation_config.yaml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,578 copying build/lib/fibsem/segmentation/sam_model.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,580 copying build/lib/fibsem/segmentation/requirements.txt -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,582 creating build/bdist.linux-armv7l/wheel/fibsem/segmentation/models 2024-01-17T06:48:50,583 copying build/lib/fibsem/segmentation/models/.gitkeep -> build/bdist.linux-armv7l/wheel/fibsem/segmentation/models 2024-01-17T06:48:50,584 copying build/lib/fibsem/segmentation/config-autolamella-waffle4.yml -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,586 copying build/lib/fibsem/segmentation/config.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,588 copying build/lib/fibsem/segmentation/model.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,590 copying build/lib/fibsem/segmentation/example.ipynb -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,594 copying build/lib/fibsem/segmentation/utils.py -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,596 copying build/lib/fibsem/segmentation/augmentation.ipynb -> build/bdist.linux-armv7l/wheel/fibsem/segmentation 2024-01-17T06:48:50,598 copying build/lib/fibsem/patterning.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,602 creating build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,603 copying build/lib/fibsem/ui/FibsemLabellingUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,606 copying build/lib/fibsem/ui/FibsemMovementWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,608 copying build/lib/fibsem/ui/FibsemModelTrainingWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,610 copying build/lib/fibsem/ui/FibsemAlignmentWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,612 copying build/lib/fibsem/ui/FibsemMicroscopeConfigurationWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,615 copying build/lib/fibsem/ui/FibsemDetectionWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,618 copying build/lib/fibsem/ui/FibsemMinimapWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,620 copying build/lib/fibsem/ui/FibsemPositionsWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,623 copying build/lib/fibsem/ui/FibsemEmbeddedDetectionWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,625 copying build/lib/fibsem/ui/FibsemImageSettingsWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,629 copying build/lib/fibsem/ui/FibsemMillingWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,632 copying build/lib/fibsem/ui/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,633 copying build/lib/fibsem/ui/.gitkeep -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,635 copying build/lib/fibsem/ui/_stylesheets.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,637 copying build/lib/fibsem/ui/FibsemCryoDepositionWidget_qt.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,639 copying build/lib/fibsem/ui/FibsemCryoDepositionWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,642 creating build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,643 copying build/lib/fibsem/ui/qtdesigner_files/FibsemLabellingUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,645 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMovementWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,647 copying build/lib/fibsem/ui/qtdesigner_files/FibsemModelTrainingWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,650 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMicroscopeConfigurationWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,653 copying build/lib/fibsem/ui/qtdesigner_files/FibsemDetectionWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,655 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMinimapWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,657 copying build/lib/fibsem/ui/qtdesigner_files/FibsemPositionsWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,659 copying build/lib/fibsem/ui/qtdesigner_files/FibsemEmbeddedDetectionWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,661 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMillingWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,664 copying build/lib/fibsem/ui/qtdesigner_files/FibsemFeatureDetectionUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,666 copying build/lib/fibsem/ui/qtdesigner_files/detection_dialog.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,668 copying build/lib/fibsem/ui/qtdesigner_files/CurrentAlignmentWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,670 copying build/lib/fibsem/ui/qtdesigner_files/FibsemGISWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,672 copying build/lib/fibsem/ui/qtdesigner_files/FibsemUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,674 copying build/lib/fibsem/ui/qtdesigner_files/FibsemSystemSetupWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,676 copying build/lib/fibsem/ui/qtdesigner_files/ImageSettingsWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,678 copying build/lib/fibsem/ui/qtdesigner_files/FibsemSegmentationModelWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,680 copying build/lib/fibsem/ui/qtdesigner_files/FibsemMultiChemWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,682 copying build/lib/fibsem/ui/qtdesigner_files/FibsemManipulatorWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,684 copying build/lib/fibsem/ui/qtdesigner_files/image_viewer.py -> build/bdist.linux-armv7l/wheel/fibsem/ui/qtdesigner_files 2024-01-17T06:48:50,687 copying build/lib/fibsem/ui/FibsemGISWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,689 copying build/lib/fibsem/ui/FibsemUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,691 copying build/lib/fibsem/ui/FibsemFeatureLabellingUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,693 copying build/lib/fibsem/ui/FibsemImageViewer.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,696 copying build/lib/fibsem/ui/windows.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,698 copying build/lib/fibsem/ui/FibsemSystemSetupWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,700 copying build/lib/fibsem/ui/FibsemDetectionUI.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,702 copying build/lib/fibsem/ui/FibsemSegmentationModelWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,704 copying build/lib/fibsem/ui/FibsemMultiChemWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,706 copying build/lib/fibsem/ui/utils.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,709 copying build/lib/fibsem/ui/FibsemManipulatorWidget.py -> build/bdist.linux-armv7l/wheel/fibsem/ui 2024-01-17T06:48:50,711 copying build/lib/fibsem/milling.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,714 creating build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-17T06:48:50,715 copying build/lib/fibsem/config/protocol.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-17T06:48:50,717 copying build/lib/fibsem/config/deposition.dbp -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-17T06:48:50,719 copying build/lib/fibsem/config/user-configurations.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-17T06:48:50,720 copying build/lib/fibsem/config/positions.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-17T06:48:50,722 copying build/lib/fibsem/config/microscope-configuration.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-17T06:48:50,724 copying build/lib/fibsem/config/system.yaml -> build/bdist.linux-armv7l/wheel/fibsem/config 2024-01-17T06:48:50,727 creating build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-17T06:48:50,727 copying build/lib/fibsem/tools/_parser.py -> build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-17T06:48:50,729 copying build/lib/fibsem/tools/run_split_dataset.py -> build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-17T06:48:50,731 copying build/lib/fibsem/tools/run_manipulator_calibration.py -> build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-17T06:48:50,733 copying build/lib/fibsem/tools/telemetry.py -> build/bdist.linux-armv7l/wheel/fibsem/tools 2024-01-17T06:48:50,735 copying build/lib/fibsem/microscope.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,743 creating build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-17T06:48:50,744 copying build/lib/fibsem/db/config.yaml -> build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-17T06:48:50,746 copying build/lib/fibsem/db/app.py -> build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-17T06:48:50,749 copying build/lib/fibsem/db/notebook.ipynb -> build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-17T06:48:50,752 copying build/lib/fibsem/db/util.py -> build/bdist.linux-armv7l/wheel/fibsem/db 2024-01-17T06:48:50,754 copying build/lib/fibsem/calibration.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,757 copying build/lib/fibsem/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,758 copying build/lib/fibsem/movement.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,760 copying build/lib/fibsem/conversions.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,762 copying build/lib/fibsem/acquire.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,765 copying build/lib/fibsem/constants.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,767 copying build/lib/fibsem/config.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,769 creating build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,770 copying build/lib/fibsem/detection/test_image.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,795 copying build/lib/fibsem/detection/config-autoliftout-dm-embryo.yml -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,797 copying build/lib/fibsem/detection/detection.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,800 creating build/bdist.linux-armv7l/wheel/fibsem/detection/test_images 2024-01-17T06:48:50,801 copying build/lib/fibsem/detection/test_images/test_needle_mask2.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images 2024-01-17T06:48:50,804 creating build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-17T06:48:50,805 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_05.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-17T06:48:50,808 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_06.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-17T06:48:50,810 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_01.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-17T06:48:50,812 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_03.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-17T06:48:50,815 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_04.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-17T06:48:50,817 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_07.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-17T06:48:50,819 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_00.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-17T06:48:50,822 copying build/lib/fibsem/detection/test_images/serial/serial_liftout_mask_02.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images/serial 2024-01-17T06:48:50,824 copying build/lib/fibsem/detection/test_images/test_needle_mask3.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images 2024-01-17T06:48:50,826 copying build/lib/fibsem/detection/test_images/test_needle_mask.tif -> build/bdist.linux-armv7l/wheel/fibsem/detection/test_images 2024-01-17T06:48:50,829 copying build/lib/fibsem/detection/run_evaluation.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,830 copying build/lib/fibsem/detection/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,832 copying build/lib/fibsem/detection/config-autolamella-serial-liftout.yaml -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,833 copying build/lib/fibsem/detection/config-autolamella-waffle.yml -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,835 copying build/lib/fibsem/detection/utils.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,837 copying build/lib/fibsem/detection/evaluation.py -> build/bdist.linux-armv7l/wheel/fibsem/detection 2024-01-17T06:48:50,840 copying build/lib/fibsem/gis.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,842 creating build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-17T06:48:50,843 copying build/lib/fibsem/imaging/__init__.py -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-17T06:48:50,844 copying build/lib/fibsem/imaging/.gitkeep -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-17T06:48:50,845 copying build/lib/fibsem/imaging/_tile.py -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-17T06:48:50,848 copying build/lib/fibsem/imaging/masks.py -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-17T06:48:50,850 copying build/lib/fibsem/imaging/utils.py -> build/bdist.linux-armv7l/wheel/fibsem/imaging 2024-01-17T06:48:50,852 copying build/lib/fibsem/alignment.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,854 copying build/lib/fibsem/utils.py -> build/bdist.linux-armv7l/wheel/fibsem 2024-01-17T06:48:50,857 running install_egg_info 2024-01-17T06:48:50,890 Copying fibsem.egg-info to build/bdist.linux-armv7l/wheel/fibsem-0.3.1-py3.11.egg-info 2024-01-17T06:48:50,901 running install_scripts 2024-01-17T06:48:50,921 creating build/bdist.linux-armv7l/wheel/fibsem-0.3.1.dist-info/WHEEL 2024-01-17T06:48:50,923 creating '/tmp/pip-wheel-yqtihbsh/fibsem-0.3.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-01-17T06:48:50,926 adding 'fibsem/__init__.py' 2024-01-17T06:48:50,927 adding 'fibsem/_version.py' 2024-01-17T06:48:50,929 adding 'fibsem/acquire.py' 2024-01-17T06:48:50,932 adding 'fibsem/alignment.py' 2024-01-17T06:48:50,934 adding 'fibsem/calibration.py' 2024-01-17T06:48:50,936 adding 'fibsem/config.py' 2024-01-17T06:48:50,938 adding 'fibsem/configuration.py' 2024-01-17T06:48:50,939 adding 'fibsem/constants.py' 2024-01-17T06:48:50,941 adding 'fibsem/conversions.py' 2024-01-17T06:48:50,942 adding 'fibsem/gis.py' 2024-01-17T06:48:50,965 adding 'fibsem/microscope.py' 2024-01-17T06:48:50,969 adding 'fibsem/milling.py' 2024-01-17T06:48:50,971 adding 'fibsem/movement.py' 2024-01-17T06:48:50,974 adding 'fibsem/patterning.py' 2024-01-17T06:48:50,982 adding 'fibsem/structures.py' 2024-01-17T06:48:50,985 adding 'fibsem/utils.py' 2024-01-17T06:48:50,987 adding 'fibsem/validation.py' 2024-01-17T06:48:50,989 adding 'fibsem/chat/.gitignore' 2024-01-17T06:48:50,990 adding 'fibsem/chat/main.py' 2024-01-17T06:48:50,991 adding 'fibsem/chat/requirements.txt' 2024-01-17T06:48:50,993 adding 'fibsem/config/deposition.dbp' 2024-01-17T06:48:50,994 adding 'fibsem/config/microscope-configuration.yaml' 2024-01-17T06:48:50,995 adding 'fibsem/config/positions.yaml' 2024-01-17T06:48:50,997 adding 'fibsem/config/protocol.yaml' 2024-01-17T06:48:50,998 adding 'fibsem/config/system.yaml' 2024-01-17T06:48:50,999 adding 'fibsem/config/user-configurations.yaml' 2024-01-17T06:48:51,001 adding 'fibsem/db/app.py' 2024-01-17T06:48:51,003 adding 'fibsem/db/config.yaml' 2024-01-17T06:48:51,005 adding 'fibsem/db/notebook.ipynb' 2024-01-17T06:48:51,007 adding 'fibsem/db/util.py' 2024-01-17T06:48:51,008 adding 'fibsem/detection/__init__.py' 2024-01-17T06:48:51,009 adding 'fibsem/detection/config-autolamella-serial-liftout.yaml' 2024-01-17T06:48:51,010 adding 'fibsem/detection/config-autolamella-waffle.yml' 2024-01-17T06:48:51,012 adding 'fibsem/detection/config-autoliftout-dm-embryo.yml' 2024-01-17T06:48:51,018 adding 'fibsem/detection/detection.py' 2024-01-17T06:48:51,020 adding 'fibsem/detection/evaluation.py' 2024-01-17T06:48:51,022 adding 'fibsem/detection/run_evaluation.py' 2024-01-17T06:48:51,503 adding 'fibsem/detection/test_image.tif' 2024-01-17T06:48:51,514 adding 'fibsem/detection/utils.py' 2024-01-17T06:48:51,516 adding 'fibsem/detection/test_images/test_needle_mask.tif' 2024-01-17T06:48:51,518 adding 'fibsem/detection/test_images/test_needle_mask2.tif' 2024-01-17T06:48:51,519 adding 'fibsem/detection/test_images/test_needle_mask3.tif' 2024-01-17T06:48:51,523 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_00.tif' 2024-01-17T06:48:51,526 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_01.tif' 2024-01-17T06:48:51,528 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_02.tif' 2024-01-17T06:48:51,530 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_03.tif' 2024-01-17T06:48:51,533 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_04.tif' 2024-01-17T06:48:51,535 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_05.tif' 2024-01-17T06:48:51,537 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_06.tif' 2024-01-17T06:48:51,540 adding 'fibsem/detection/test_images/serial/serial_liftout_mask_07.tif' 2024-01-17T06:48:51,542 adding 'fibsem/imaging/.gitkeep' 2024-01-17T06:48:51,543 adding 'fibsem/imaging/__init__.py' 2024-01-17T06:48:51,545 adding 'fibsem/imaging/_tile.py' 2024-01-17T06:48:51,547 adding 'fibsem/imaging/masks.py' 2024-01-17T06:48:51,548 adding 'fibsem/imaging/utils.py' 2024-01-17T06:48:51,551 adding 'fibsem/segmentation/README.md' 2024-01-17T06:48:51,552 adding 'fibsem/segmentation/__init__.py' 2024-01-17T06:48:51,554 adding 'fibsem/segmentation/_nnunet.py' 2024-01-17T06:48:51,556 adding 'fibsem/segmentation/augmentation.ipynb' 2024-01-17T06:48:51,557 adding 'fibsem/segmentation/config-autolamella-mega-v4-xl.yml' 2024-01-17T06:48:51,558 adding 'fibsem/segmentation/config-autolamella-mega-v4.yml' 2024-01-17T06:48:51,559 adding 'fibsem/segmentation/config-autolamella-mega-v5.yml' 2024-01-17T06:48:51,561 adding 'fibsem/segmentation/config-autolamella-serial-liftout-v1.yaml' 2024-01-17T06:48:51,562 adding 'fibsem/segmentation/config-autolamella-waffle4.yml' 2024-01-17T06:48:51,563 adding 'fibsem/segmentation/config.py' 2024-01-17T06:48:51,564 adding 'fibsem/segmentation/config.yml' 2024-01-17T06:48:51,566 adding 'fibsem/segmentation/dataset.py' 2024-01-17T06:48:51,577 adding 'fibsem/segmentation/example.ipynb' 2024-01-17T06:48:51,579 adding 'fibsem/segmentation/inference.py' 2024-01-17T06:48:51,580 adding 'fibsem/segmentation/model.py' 2024-01-17T06:48:51,582 adding 'fibsem/segmentation/nnunet_model.py' 2024-01-17T06:48:51,583 adding 'fibsem/segmentation/onnx_model.py' 2024-01-17T06:48:51,584 adding 'fibsem/segmentation/requirements.txt' 2024-01-17T06:48:51,586 adding 'fibsem/segmentation/sam_model.py' 2024-01-17T06:48:51,587 adding 'fibsem/segmentation/segmentation_config.yaml' 2024-01-17T06:48:51,739 adding 'fibsem/segmentation/test_image.tif' 2024-01-17T06:48:51,749 adding 'fibsem/segmentation/train.py' 2024-01-17T06:48:51,751 adding 'fibsem/segmentation/utils.py' 2024-01-17T06:48:52,115 adding 'fibsem/segmentation/docs/example_napari.png' 2024-01-17T06:48:52,276 adding 'fibsem/segmentation/docs/imgs/combined/combined.jpg' 2024-01-17T06:48:52,328 adding 'fibsem/segmentation/docs/imgs/labelled/label.tif' 2024-01-17T06:48:52,493 adding 'fibsem/segmentation/docs/imgs/raw/image.tif' 2024-01-17T06:48:52,503 adding 'fibsem/segmentation/models/.gitkeep' 2024-01-17T06:48:52,504 adding 'fibsem/tools/_parser.py' 2024-01-17T06:48:52,506 adding 'fibsem/tools/run_manipulator_calibration.py' 2024-01-17T06:48:52,507 adding 'fibsem/tools/run_split_dataset.py' 2024-01-17T06:48:52,508 adding 'fibsem/tools/telemetry.py' 2024-01-17T06:48:52,510 adding 'fibsem/ui/.gitkeep' 2024-01-17T06:48:52,512 adding 'fibsem/ui/FibsemAlignmentWidget.py' 2024-01-17T06:48:52,513 adding 'fibsem/ui/FibsemCryoDepositionWidget.py' 2024-01-17T06:48:52,515 adding 'fibsem/ui/FibsemCryoDepositionWidget_qt.py' 2024-01-17T06:48:52,516 adding 'fibsem/ui/FibsemDetectionUI.py' 2024-01-17T06:48:52,519 adding 'fibsem/ui/FibsemDetectionWidget.py' 2024-01-17T06:48:52,521 adding 'fibsem/ui/FibsemEmbeddedDetectionWidget.py' 2024-01-17T06:48:52,524 adding 'fibsem/ui/FibsemFeatureLabellingUI.py' 2024-01-17T06:48:52,525 adding 'fibsem/ui/FibsemGISWidget.py' 2024-01-17T06:48:52,529 adding 'fibsem/ui/FibsemImageSettingsWidget.py' 2024-01-17T06:48:52,531 adding 'fibsem/ui/FibsemImageViewer.py' 2024-01-17T06:48:52,533 adding 'fibsem/ui/FibsemLabellingUI.py' 2024-01-17T06:48:52,535 adding 'fibsem/ui/FibsemManipulatorWidget.py' 2024-01-17T06:48:52,538 adding 'fibsem/ui/FibsemMicroscopeConfigurationWidget.py' 2024-01-17T06:48:52,542 adding 'fibsem/ui/FibsemMillingWidget.py' 2024-01-17T06:48:52,546 adding 'fibsem/ui/FibsemMinimapWidget.py' 2024-01-17T06:48:52,547 adding 'fibsem/ui/FibsemModelTrainingWidget.py' 2024-01-17T06:48:52,550 adding 'fibsem/ui/FibsemMovementWidget.py' 2024-01-17T06:48:52,552 adding 'fibsem/ui/FibsemMultiChemWidget.py' 2024-01-17T06:48:52,553 adding 'fibsem/ui/FibsemPositionsWidget.py' 2024-01-17T06:48:52,555 adding 'fibsem/ui/FibsemSegmentationModelWidget.py' 2024-01-17T06:48:52,557 adding 'fibsem/ui/FibsemSystemSetupWidget.py' 2024-01-17T06:48:52,559 adding 'fibsem/ui/FibsemUI.py' 2024-01-17T06:48:52,560 adding 'fibsem/ui/__init__.py' 2024-01-17T06:48:52,561 adding 'fibsem/ui/_stylesheets.py' 2024-01-17T06:48:52,564 adding 'fibsem/ui/utils.py' 2024-01-17T06:48:52,566 adding 'fibsem/ui/windows.py' 2024-01-17T06:48:52,568 adding 'fibsem/ui/qtdesigner_files/CurrentAlignmentWidget.py' 2024-01-17T06:48:52,570 adding 'fibsem/ui/qtdesigner_files/FibsemDetectionWidget.py' 2024-01-17T06:48:52,571 adding 'fibsem/ui/qtdesigner_files/FibsemEmbeddedDetectionWidget.py' 2024-01-17T06:48:52,573 adding 'fibsem/ui/qtdesigner_files/FibsemFeatureDetectionUI.py' 2024-01-17T06:48:52,575 adding 'fibsem/ui/qtdesigner_files/FibsemGISWidget.py' 2024-01-17T06:48:52,576 adding 'fibsem/ui/qtdesigner_files/FibsemLabellingUI.py' 2024-01-17T06:48:52,578 adding 'fibsem/ui/qtdesigner_files/FibsemManipulatorWidget.py' 2024-01-17T06:48:52,581 adding 'fibsem/ui/qtdesigner_files/FibsemMicroscopeConfigurationWidget.py' 2024-01-17T06:48:52,584 adding 'fibsem/ui/qtdesigner_files/FibsemMillingWidget.py' 2024-01-17T06:48:52,586 adding 'fibsem/ui/qtdesigner_files/FibsemMinimapWidget.py' 2024-01-17T06:48:52,588 adding 'fibsem/ui/qtdesigner_files/FibsemModelTrainingWidget.py' 2024-01-17T06:48:52,589 adding 'fibsem/ui/qtdesigner_files/FibsemMovementWidget.py' 2024-01-17T06:48:52,591 adding 'fibsem/ui/qtdesigner_files/FibsemMultiChemWidget.py' 2024-01-17T06:48:52,592 adding 'fibsem/ui/qtdesigner_files/FibsemPositionsWidget.py' 2024-01-17T06:48:52,594 adding 'fibsem/ui/qtdesigner_files/FibsemSegmentationModelWidget.py' 2024-01-17T06:48:52,595 adding 'fibsem/ui/qtdesigner_files/FibsemSystemSetupWidget.py' 2024-01-17T06:48:52,596 adding 'fibsem/ui/qtdesigner_files/FibsemUI.py' 2024-01-17T06:48:52,599 adding 'fibsem/ui/qtdesigner_files/ImageSettingsWidget.py' 2024-01-17T06:48:52,600 adding 'fibsem/ui/qtdesigner_files/detection_dialog.py' 2024-01-17T06:48:52,603 adding 'fibsem/ui/qtdesigner_files/image_viewer.py' 2024-01-17T06:48:52,605 adding 'fibsem-0.3.1.dist-info/LICENSE' 2024-01-17T06:48:52,606 adding 'fibsem-0.3.1.dist-info/METADATA' 2024-01-17T06:48:52,607 adding 'fibsem-0.3.1.dist-info/WHEEL' 2024-01-17T06:48:52,608 adding 'fibsem-0.3.1.dist-info/entry_points.txt' 2024-01-17T06:48:52,609 adding 'fibsem-0.3.1.dist-info/top_level.txt' 2024-01-17T06:48:52,612 adding 'fibsem-0.3.1.dist-info/RECORD' 2024-01-17T06:48:52,699 removing build/bdist.linux-armv7l/wheel 2024-01-17T06:48:52,851 Building wheel for fibsem (setup.py): finished with status 'done' 2024-01-17T06:48:52,936 Created wheel for fibsem: filename=fibsem-0.3.1-py3-none-any.whl size=8441476 sha256=72ca906da40a31401ad7636438566ad77e6d6ef434c85d4517c7411645c41027 2024-01-17T06:48:52,938 Stored in directory: /tmp/pip-ephem-wheel-cache-09w_c68d/wheels/63/fe/de/c8a5dc972b4130e97fe0722fe53aaf8991897010f90f9bb753 2024-01-17T06:48:52,956 Successfully built fibsem 2024-01-17T06:48:53,158 Removed build tracker: '/tmp/pip-build-tracker-teljinx8'