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https://www.piwheels.org/simple/mhctools/) 2024-02-12T22:32:05,665 Skipping link: No binaries permitted for mhctools: https://www.piwheels.org/simple/mhctools/mhctools-1.6.20-py3-none-any.whl#sha256=d47888e85b0c7eb54f7cfd3933a2e71917130fb26bedf4523d8b72f40f384ecc (from https://www.piwheels.org/simple/mhctools/) 2024-02-12T22:32:05,665 Skipping link: No binaries permitted for mhctools: https://www.piwheels.org/simple/mhctools/mhctools-1.6.19-py3-none-any.whl#sha256=09c93c1283b7b08f8a8ff50a16a3f5abb9b0231caebc967ce6ac889ba231c0ed (from https://www.piwheels.org/simple/mhctools/) 2024-02-12T22:32:05,666 Skipping link: No binaries permitted for mhctools: https://www.piwheels.org/simple/mhctools/mhctools-1.6.18-py3-none-any.whl#sha256=abd410c4abeda3fcec768639191120f8f73ba593c86e5b9d3d891a69d35f383a (from https://www.piwheels.org/simple/mhctools/) 2024-02-12T22:32:05,666 Skipping link: No binaries permitted for mhctools: 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2024-02-12T22:32:05,687 Skipping link: No binaries permitted for mhctools: https://www.piwheels.org/simple/mhctools/mhctools-0.0.11-py3-none-any.whl#sha256=2c8de62e6de97d636cb70d3c793bc0c8cb8ff4d6880d7bedca6a53cf52220211 (from https://www.piwheels.org/simple/mhctools/) 2024-02-12T22:32:05,688 Skipping link: No binaries permitted for mhctools: https://www.piwheels.org/simple/mhctools/mhctools-0.0.6-py3-none-any.whl#sha256=e5183ae6f7c156a65323168a85ccc4b42c594ce3961b013bf575343fc811deef (from https://www.piwheels.org/simple/mhctools/) 2024-02-12T22:32:05,688 Skipping link: No binaries permitted for mhctools: https://www.piwheels.org/simple/mhctools/mhctools-0.0.5-py3-none-any.whl#sha256=d74aa8febfb1ff9ae756cbdeea3c5950cd924b27fa562aa4473dce6eab0d3407 (from https://www.piwheels.org/simple/mhctools/) 2024-02-12T22:32:05,689 Skipping link: No binaries permitted for mhctools: https://www.piwheels.org/simple/mhctools/mhctools-0.0.4-py3-none-any.whl#sha256=dd546a0cc350d5ce77e7af9d45172c9a5f8c105974b73ffe49332bf32fcebb13 (from https://www.piwheels.org/simple/mhctools/) 2024-02-12T22:32:05,690 Skipping link: not a file: https://www.piwheels.org/simple/mhctools/ 2024-02-12T22:32:05,690 Skipping link: not a file: https://pypi.org/simple/mhctools/ 2024-02-12T22:32:05,716 Given no hashes to check 1 links for project 'mhctools': discarding no candidates 2024-02-12T22:32:05,736 Collecting mhctools==1.9.0 2024-02-12T22:32:05,738 Created temporary directory: /tmp/pip-unpack-9xraebv0 2024-02-12T22:32:05,976 Downloading mhctools-1.9.0.tar.gz (44 kB) 2024-02-12T22:32:06,131 Added mhctools==1.9.0 from https://files.pythonhosted.org/packages/0a/0e/195899d431d381b8b756f36e1dd66d236132488bd0f1ba47dfd3e6bb5548/mhctools-1.9.0.tar.gz to build tracker '/tmp/pip-build-tracker-zus0dlnx' 2024-02-12T22:32:06,134 Running setup.py (path:/tmp/pip-wheel-jmiu0gox/mhctools_e83afbdf8ee14e279ec638b3e7c13ef8/setup.py) egg_info for package mhctools 2024-02-12T22:32:06,134 Created temporary directory: /tmp/pip-pip-egg-info-4fiiiewy 2024-02-12T22:32:06,135 Preparing metadata (setup.py): started 2024-02-12T22:32:06,136 Running command python setup.py egg_info 2024-02-12T22:32:07,246 running egg_info 2024-02-12T22:32:07,247 creating /tmp/pip-pip-egg-info-4fiiiewy/mhctools.egg-info 2024-02-12T22:32:07,281 writing /tmp/pip-pip-egg-info-4fiiiewy/mhctools.egg-info/PKG-INFO 2024-02-12T22:32:07,284 writing dependency_links to /tmp/pip-pip-egg-info-4fiiiewy/mhctools.egg-info/dependency_links.txt 2024-02-12T22:32:07,286 writing entry points to /tmp/pip-pip-egg-info-4fiiiewy/mhctools.egg-info/entry_points.txt 2024-02-12T22:32:07,287 writing requirements to /tmp/pip-pip-egg-info-4fiiiewy/mhctools.egg-info/requires.txt 2024-02-12T22:32:07,288 writing top-level names to /tmp/pip-pip-egg-info-4fiiiewy/mhctools.egg-info/top_level.txt 2024-02-12T22:32:07,289 writing manifest file '/tmp/pip-pip-egg-info-4fiiiewy/mhctools.egg-info/SOURCES.txt' 2024-02-12T22:32:07,400 reading manifest file '/tmp/pip-pip-egg-info-4fiiiewy/mhctools.egg-info/SOURCES.txt' 2024-02-12T22:32:07,401 reading manifest template 'MANIFEST.in' 2024-02-12T22:32:07,402 adding license file 'LICENSE' 2024-02-12T22:32:07,405 writing manifest file '/tmp/pip-pip-egg-info-4fiiiewy/mhctools.egg-info/SOURCES.txt' 2024-02-12T22:32:07,512 Preparing metadata (setup.py): finished with status 'done' 2024-02-12T22:32:07,516 Source in /tmp/pip-wheel-jmiu0gox/mhctools_e83afbdf8ee14e279ec638b3e7c13ef8 has version 1.9.0, which satisfies requirement mhctools==1.9.0 from https://files.pythonhosted.org/packages/0a/0e/195899d431d381b8b756f36e1dd66d236132488bd0f1ba47dfd3e6bb5548/mhctools-1.9.0.tar.gz 2024-02-12T22:32:07,517 Removed mhctools==1.9.0 from https://files.pythonhosted.org/packages/0a/0e/195899d431d381b8b756f36e1dd66d236132488bd0f1ba47dfd3e6bb5548/mhctools-1.9.0.tar.gz from build tracker '/tmp/pip-build-tracker-zus0dlnx' 2024-02-12T22:32:07,522 Created temporary directory: /tmp/pip-unpack-xfapudzg 2024-02-12T22:32:07,523 Created temporary directory: /tmp/pip-unpack-tfy04mx6 2024-02-12T22:32:07,535 Building wheels for collected packages: mhctools 2024-02-12T22:32:07,539 Created temporary directory: /tmp/pip-wheel-vht00byb 2024-02-12T22:32:07,539 Building wheel for mhctools (setup.py): started 2024-02-12T22:32:07,541 Destination directory: /tmp/pip-wheel-vht00byb 2024-02-12T22:32:07,541 Running command python setup.py bdist_wheel 2024-02-12T22:32:08,605 running bdist_wheel 2024-02-12T22:32:08,737 running build 2024-02-12T22:32:08,738 running build_py 2024-02-12T22:32:08,774 creating build 2024-02-12T22:32:08,775 creating build/lib 2024-02-12T22:32:08,776 creating build/lib/mhctools 2024-02-12T22:32:08,777 copying mhctools/netmhc_pan.py -> build/lib/mhctools 2024-02-12T22:32:08,779 copying mhctools/netmhc.py -> build/lib/mhctools 2024-02-12T22:32:08,781 copying mhctools/netmhc_pan28.py -> build/lib/mhctools 2024-02-12T22:32:08,782 copying mhctools/common.py -> build/lib/mhctools 2024-02-12T22:32:08,784 copying mhctools/netmhc3.py -> build/lib/mhctools 2024-02-12T22:32:08,786 copying mhctools/base_predictor.py -> build/lib/mhctools 2024-02-12T22:32:08,788 copying mhctools/netmhc_cons.py -> build/lib/mhctools 2024-02-12T22:32:08,790 copying mhctools/cleanup_context.py -> build/lib/mhctools 2024-02-12T22:32:08,792 copying mhctools/iedb.py -> build/lib/mhctools 2024-02-12T22:32:08,794 copying mhctools/logging.py -> build/lib/mhctools 2024-02-12T22:32:08,795 copying mhctools/netmhc_pan4.py -> build/lib/mhctools 2024-02-12T22:32:08,797 copying mhctools/netmhc_pan41.py -> build/lib/mhctools 2024-02-12T22:32:08,799 copying mhctools/netmhc4.py -> build/lib/mhctools 2024-02-12T22:32:08,800 copying mhctools/process_helpers.py -> build/lib/mhctools 2024-02-12T22:32:08,803 copying mhctools/binding_prediction.py -> build/lib/mhctools 2024-02-12T22:32:08,805 copying mhctools/netmhc_pan3.py -> build/lib/mhctools 2024-02-12T22:32:08,806 copying mhctools/input_file_formats.py -> build/lib/mhctools 2024-02-12T22:32:08,808 copying mhctools/random_predictor.py -> build/lib/mhctools 2024-02-12T22:32:08,809 copying mhctools/netchop.py -> build/lib/mhctools 2024-02-12T22:32:08,811 copying mhctools/mixmhcpred.py -> build/lib/mhctools 2024-02-12T22:32:08,812 copying mhctools/binding_prediction_collection.py -> build/lib/mhctools 2024-02-12T22:32:08,814 copying mhctools/netmhcii_pan.py -> build/lib/mhctools 2024-02-12T22:32:08,816 copying mhctools/__init__.py -> build/lib/mhctools 2024-02-12T22:32:08,817 copying mhctools/unsupported_allele.py -> build/lib/mhctools 2024-02-12T22:32:08,818 copying mhctools/base_commandline_predictor.py -> build/lib/mhctools 2024-02-12T22:32:08,821 copying mhctools/parsing.py -> build/lib/mhctools 2024-02-12T22:32:08,823 copying mhctools/mhcflurry.py -> build/lib/mhctools 2024-02-12T22:32:08,825 creating build/lib/mhctools/cli 2024-02-12T22:32:08,826 copying mhctools/cli/parsing_helpers.py -> build/lib/mhctools/cli 2024-02-12T22:32:08,828 copying mhctools/cli/__init__.py -> build/lib/mhctools/cli 2024-02-12T22:32:08,829 copying mhctools/cli/args.py -> build/lib/mhctools/cli 2024-02-12T22:32:08,831 copying mhctools/cli/script.py -> build/lib/mhctools/cli 2024-02-12T22:32:08,835 copying mhctools/logging.conf -> build/lib/mhctools 2024-02-12T22:32:08,872 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-02-12T22:32:08,872 !! 2024-02-12T22:32:08,873 ******************************************************************************** 2024-02-12T22:32:08,874 Please avoid running ``setup.py`` directly. 2024-02-12T22:32:08,874 Instead, use pypa/build, pypa/installer or other 2024-02-12T22:32:08,875 standards-based tools. 2024-02-12T22:32:08,876 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-02-12T22:32:08,876 ******************************************************************************** 2024-02-12T22:32:08,878 !! 2024-02-12T22:32:08,878 self.initialize_options() 2024-02-12T22:32:08,906 installing to build/bdist.linux-armv7l/wheel 2024-02-12T22:32:08,906 running install 2024-02-12T22:32:08,930 running install_lib 2024-02-12T22:32:08,963 creating build/bdist.linux-armv7l 2024-02-12T22:32:08,964 creating build/bdist.linux-armv7l/wheel 2024-02-12T22:32:08,966 creating build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,967 copying build/lib/mhctools/netmhc_pan.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,969 copying build/lib/mhctools/netmhc.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,970 copying build/lib/mhctools/netmhc_pan28.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,972 copying build/lib/mhctools/common.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,974 copying build/lib/mhctools/netmhc3.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,976 copying build/lib/mhctools/base_predictor.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,978 copying build/lib/mhctools/netmhc_cons.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,979 copying build/lib/mhctools/cleanup_context.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,981 copying build/lib/mhctools/iedb.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,983 copying build/lib/mhctools/logging.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,985 copying build/lib/mhctools/netmhc_pan4.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,987 copying build/lib/mhctools/netmhc_pan41.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,988 copying build/lib/mhctools/netmhc4.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,990 copying build/lib/mhctools/process_helpers.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,992 copying build/lib/mhctools/binding_prediction.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,994 copying build/lib/mhctools/netmhc_pan3.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,996 copying build/lib/mhctools/input_file_formats.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,997 copying build/lib/mhctools/random_predictor.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:08,999 copying build/lib/mhctools/logging.conf -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,000 copying build/lib/mhctools/netchop.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,002 copying build/lib/mhctools/mixmhcpred.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,004 copying build/lib/mhctools/binding_prediction_collection.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,006 copying build/lib/mhctools/netmhcii_pan.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,008 copying build/lib/mhctools/__init__.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,009 copying build/lib/mhctools/unsupported_allele.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,011 creating build/bdist.linux-armv7l/wheel/mhctools/cli 2024-02-12T22:32:09,012 copying build/lib/mhctools/cli/parsing_helpers.py -> build/bdist.linux-armv7l/wheel/mhctools/cli 2024-02-12T22:32:09,014 copying build/lib/mhctools/cli/__init__.py -> build/bdist.linux-armv7l/wheel/mhctools/cli 2024-02-12T22:32:09,016 copying build/lib/mhctools/cli/args.py -> build/bdist.linux-armv7l/wheel/mhctools/cli 2024-02-12T22:32:09,018 copying build/lib/mhctools/cli/script.py -> build/bdist.linux-armv7l/wheel/mhctools/cli 2024-02-12T22:32:09,020 copying build/lib/mhctools/base_commandline_predictor.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,022 copying build/lib/mhctools/parsing.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,025 copying build/lib/mhctools/mhcflurry.py -> build/bdist.linux-armv7l/wheel/mhctools 2024-02-12T22:32:09,026 running install_egg_info 2024-02-12T22:32:09,106 running egg_info 2024-02-12T22:32:09,139 writing mhctools.egg-info/PKG-INFO 2024-02-12T22:32:09,142 writing dependency_links to mhctools.egg-info/dependency_links.txt 2024-02-12T22:32:09,144 writing entry points to mhctools.egg-info/entry_points.txt 2024-02-12T22:32:09,145 writing requirements to mhctools.egg-info/requires.txt 2024-02-12T22:32:09,146 writing top-level names to mhctools.egg-info/top_level.txt 2024-02-12T22:32:09,184 reading manifest file 'mhctools.egg-info/SOURCES.txt' 2024-02-12T22:32:09,187 reading manifest template 'MANIFEST.in' 2024-02-12T22:32:09,187 adding license file 'LICENSE' 2024-02-12T22:32:09,191 writing manifest file 'mhctools.egg-info/SOURCES.txt' 2024-02-12T22:32:09,192 Copying mhctools.egg-info to build/bdist.linux-armv7l/wheel/mhctools-1.9.0-py3.11.egg-info 2024-02-12T22:32:09,204 running install_scripts 2024-02-12T22:32:09,220 creating build/bdist.linux-armv7l/wheel/mhctools-1.9.0.dist-info/WHEEL 2024-02-12T22:32:09,222 creating '/tmp/pip-wheel-vht00byb/mhctools-1.9.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-12T22:32:09,225 adding 'mhctools/__init__.py' 2024-02-12T22:32:09,227 adding 'mhctools/base_commandline_predictor.py' 2024-02-12T22:32:09,229 adding 'mhctools/base_predictor.py' 2024-02-12T22:32:09,231 adding 'mhctools/binding_prediction.py' 2024-02-12T22:32:09,232 adding 'mhctools/binding_prediction_collection.py' 2024-02-12T22:32:09,233 adding 'mhctools/cleanup_context.py' 2024-02-12T22:32:09,235 adding 'mhctools/common.py' 2024-02-12T22:32:09,237 adding 'mhctools/iedb.py' 2024-02-12T22:32:09,238 adding 'mhctools/input_file_formats.py' 2024-02-12T22:32:09,239 adding 'mhctools/logging.conf' 2024-02-12T22:32:09,240 adding 'mhctools/logging.py' 2024-02-12T22:32:09,241 adding 'mhctools/mhcflurry.py' 2024-02-12T22:32:09,242 adding 'mhctools/mixmhcpred.py' 2024-02-12T22:32:09,244 adding 'mhctools/netchop.py' 2024-02-12T22:32:09,245 adding 'mhctools/netmhc.py' 2024-02-12T22:32:09,246 adding 'mhctools/netmhc3.py' 2024-02-12T22:32:09,247 adding 'mhctools/netmhc4.py' 2024-02-12T22:32:09,248 adding 'mhctools/netmhc_cons.py' 2024-02-12T22:32:09,249 adding 'mhctools/netmhc_pan.py' 2024-02-12T22:32:09,251 adding 'mhctools/netmhc_pan28.py' 2024-02-12T22:32:09,252 adding 'mhctools/netmhc_pan3.py' 2024-02-12T22:32:09,253 adding 'mhctools/netmhc_pan4.py' 2024-02-12T22:32:09,254 adding 'mhctools/netmhc_pan41.py' 2024-02-12T22:32:09,256 adding 'mhctools/netmhcii_pan.py' 2024-02-12T22:32:09,258 adding 'mhctools/parsing.py' 2024-02-12T22:32:09,262 adding 'mhctools/process_helpers.py' 2024-02-12T22:32:09,263 adding 'mhctools/random_predictor.py' 2024-02-12T22:32:09,265 adding 'mhctools/unsupported_allele.py' 2024-02-12T22:32:09,266 adding 'mhctools/cli/__init__.py' 2024-02-12T22:32:09,268 adding 'mhctools/cli/args.py' 2024-02-12T22:32:09,269 adding 'mhctools/cli/parsing_helpers.py' 2024-02-12T22:32:09,270 adding 'mhctools/cli/script.py' 2024-02-12T22:32:09,273 adding 'mhctools-1.9.0.dist-info/LICENSE' 2024-02-12T22:32:09,275 adding 'mhctools-1.9.0.dist-info/METADATA' 2024-02-12T22:32:09,276 adding 'mhctools-1.9.0.dist-info/WHEEL' 2024-02-12T22:32:09,276 adding 'mhctools-1.9.0.dist-info/entry_points.txt' 2024-02-12T22:32:09,277 adding 'mhctools-1.9.0.dist-info/top_level.txt' 2024-02-12T22:32:09,278 adding 'mhctools-1.9.0.dist-info/RECORD' 2024-02-12T22:32:09,280 removing build/bdist.linux-armv7l/wheel 2024-02-12T22:32:09,399 Building wheel for mhctools (setup.py): finished with status 'done' 2024-02-12T22:32:09,402 Created wheel for mhctools: filename=mhctools-1.9.0-py3-none-any.whl size=54888 sha256=1ad4d331b25fb664897164e1a236c3d24dc9a7dedb0d838fe1c69bfc9dc2f26c 2024-02-12T22:32:09,403 Stored in directory: /tmp/pip-ephem-wheel-cache-au9ifc1p/wheels/b6/df/58/ca47f0f6a5a14f9d4d8f754702ef701cd9137c2a1fe74b3cb2 2024-02-12T22:32:09,414 Successfully built mhctools 2024-02-12T22:32:09,418 Removed build tracker: '/tmp/pip-build-tracker-zus0dlnx'