2024-04-02T19:06:23,568 Created temporary directory: /tmp/pip-build-tracker-t6sib9oi 2024-04-02T19:06:23,569 Initialized build tracking at /tmp/pip-build-tracker-t6sib9oi 2024-04-02T19:06:23,569 Created build tracker: /tmp/pip-build-tracker-t6sib9oi 2024-04-02T19:06:23,570 Entered build tracker: /tmp/pip-build-tracker-t6sib9oi 2024-04-02T19:06:23,570 Created temporary directory: /tmp/pip-wheel-s27dq0_f 2024-04-02T19:06:23,574 Created temporary directory: /tmp/pip-ephem-wheel-cache-4r0dxynv 2024-04-02T19:06:23,600 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-02T19:06:23,604 2 location(s) to search for versions of westpa: 2024-04-02T19:06:23,604 * https://pypi.org/simple/westpa/ 2024-04-02T19:06:23,604 * https://www.piwheels.org/simple/westpa/ 2024-04-02T19:06:23,604 Fetching project page and analyzing links: https://pypi.org/simple/westpa/ 2024-04-02T19:06:23,605 Getting page https://pypi.org/simple/westpa/ 2024-04-02T19:06:23,607 Found index url https://pypi.org/simple/ 2024-04-02T19:06:23,661 Fetched page https://pypi.org/simple/westpa/ as application/vnd.pypi.simple.v1+json 2024-04-02T19:06:23,672 Found link https://files.pythonhosted.org/packages/a8/57/c4b43d48677bb48b620e3f0cda3c71aa997ab3a039ba4ba0cb05d807df19/westpa-0.0.2.tar.gz (from https://pypi.org/simple/westpa/), version: 0.0.2 2024-04-02T19:06:23,672 Found link https://files.pythonhosted.org/packages/b0/49/26240704f4fcc44e3187b617d080c7b96a1f8b4004a79b19b189bf738a49/westpa-0.0.3.tar.gz (from https://pypi.org/simple/westpa/), version: 0.0.3 2024-04-02T19:06:23,673 Found link https://files.pythonhosted.org/packages/d6/81/c5fea3140456e5d1317e3ed32e1d5e01f2e9452cd100b0b3656b67cada3c/westpa-2.0.dev1.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2.0.dev1 2024-04-02T19:06:23,674 Found link https://files.pythonhosted.org/packages/fe/e9/e9ef53a71a73dfe76a8875a8eb2ce1c16942a7878502270922c5fdc8016f/westpa-2.0b5.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2.0b5 2024-04-02T19:06:23,674 Found link https://files.pythonhosted.org/packages/30/04/9821a74c5a60f831f54226e64454b172bfe7c5c84a505198aaa13058faa3/westpa-2022.1.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.1 2024-04-02T19:06:23,675 Found link https://files.pythonhosted.org/packages/30/c8/6eb627254809162a3b520723f678de9788be3fa1377bd5d943561130e5c8/westpa-2022.2.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.2 2024-04-02T19:06:23,675 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/69/0e/ec12d6ca2d3a2af50e8e93dc9a29731e37309751f2ec5786963638e73401/westpa-2022.3-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,675 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/b7/63/69efad20133b8ce5096cf01b8572116688e45d2eb874ac38de718ff50ede/westpa-2022.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,676 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/36/d2/76b2259196de2b10667808baf22c302cdac0e211f58d18a149dbd6974d25/westpa-2022.3-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,676 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/df/55/09ef147d70a6cb997d904f5094f05525ae5aa23ef9a7b0fe4a78448b7f83/westpa-2022.3-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,676 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/11/12/bab6b8aa12f6af86cbade87c82ce104e9b084dd5848b2cdd7894c4777c75/westpa-2022.3-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,676 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/b9/9c/9a76bebd1bd2a42e0cc16d21be5d84b89b4807a1a44875764188bb5b75ff/westpa-2022.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,676 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/9b/a3/e580004b1202a1f78f412994d2182e72dc029303e90e925e87f403387424/westpa-2022.3-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,677 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/30/f4/3dd7940c7c33b835729ea0c36429270aa9eba85f88eb3c9c72c16ae1b586/westpa-2022.3-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,677 Found link https://files.pythonhosted.org/packages/a1/a5/e82ed1cf2a3d3edd0350329da58d166bfff5601c07174076f76d3b7f2628/westpa-2022.3.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.3 2024-04-02T19:06:23,677 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/52/68/14e017cd84baec15ea6b88544153ac57109e1711f3ceb8682743fb4c1b4c/westpa-2022.4-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,678 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/3e/d0/88ad29bc7956e1c060501043bffdf134a0464f62b84d52c370ac537bb03d/westpa-2022.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,678 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/21/41/a8e7663bc0836e3a7cb93e7be0bb6e47f31ae054bd499cbd36bf01911ce3/westpa-2022.4-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,678 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/fd/15/cc3188fb79584322e4af515bf31c25154bbf2aba5917d9da5dd0a1f491d5/westpa-2022.4-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,678 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/24/24/e4380e00ca84dd2ab03db35aba7c72451eacb92ebae0dbd3e9de0aa21165/westpa-2022.4-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,678 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/93/1f/f5a9032c1012a4f1ace13eb9093e1728f0d9d9a61f3869a6a6c6e2c034ce/westpa-2022.4-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,679 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/7c/82/4e7d62a526cf73294131f851c482a32d48e99ea5a925f67afea20b079055/westpa-2022.4-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,679 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/fc/33/5fcbfd10fc416548c71240e08f39a10e6c342aeea41664d383de4e5ce105/westpa-2022.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,679 Found link https://files.pythonhosted.org/packages/72/5e/c9bf1571544cc7b7806d6d847ac896febe714b9c9a1e3789e457399a91fd/westpa-2022.4.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.4 2024-04-02T19:06:23,680 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/fa/9a/348dbaf04bf8c9a18b44a01d676e354154dbf25dd29b503d8aad12b979e5/westpa-2022.5-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,680 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/aa/1e/d71b9013e2d531b5e7c3bdbb841bdd8aa210ce69bccfcc0e5b7536f6f822/westpa-2022.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,680 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/09/8f/2e98390c7dd1d68e89ae77751f9c925bbd53ea436715bb3df29734a6ef1e/westpa-2022.5-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,680 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/10/54/1e68102cfc5256e817af48914a434a0ef39429d12be44edd9b123e45609f/westpa-2022.5-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,680 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/cf/ed/0d39fce58f3f524cce9ea157eb23606a1f9ec8774a474426f5407226da6c/westpa-2022.5-cp37-cp37m-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,681 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/c6/81/72e1c125d71aa030efad147277a30c95fde09123a3afcb8d1b13e41561e0/westpa-2022.5-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,681 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/cd/0e/2d64005041bef9385c0b7064bfb332ca2aa383db3b7ea718eb50f738302c/westpa-2022.5-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,681 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/4b/fc/cb3f90c44be96986c1e2e84dd8ade75a0d027c980bbbc1a16cb57d7fb152/westpa-2022.5-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,681 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/75/ff/b7fa21ff0f42d9a6ed4d910a4caeac9bec6ad16e1448be93e4589466f122/westpa-2022.5-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,681 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/25/67/e625375bc0eec995ba44a95095357dfa53ff5c4c879050db17159ad82c11/westpa-2022.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,682 Found link https://files.pythonhosted.org/packages/3f/47/4b8d30ba9e1c2d6d37ed73e58cf643815e35f0f5cfa591aac166b5250a7f/westpa-2022.5.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.5 2024-04-02T19:06:23,682 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/03/aa/20a495157364e8034b94b840f948b9fa3bd2183dee0171f2716149bedefa/westpa-2022.6-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,682 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/0e/c0/1a37a121a08043f3c495f36139add5c7b3b496a8ae00955cbf0548bb4d42/westpa-2022.6-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,683 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/1b/a5/63b5bfc8c282e6c2b3a9e8bfa68cf391be4917209fc2cc2e4fc35e72f5bf/westpa-2022.6-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,683 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/a3/58/6757eada2d8e69db541710e34e6f0cfb68aed7893b3f35dd0981edf3d667/westpa-2022.6-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,683 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/1d/44/f0fb1d3b66af19900e453db55b926fd2d1caabbf594a75b3cad24afb43bc/westpa-2022.6-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,683 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/f6/d4/8e9fee479a16c726ad52a625fb9bb939f7beb687b20f2dc125b93ced4bd9/westpa-2022.6-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,683 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/af/69/165b57fc2a43e944afa2072a4546b95c770cbe13cfaeb69cffd3e33b837d/westpa-2022.6-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,684 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/7c/da/cddfca811f08ed21bfea225e0b1cadae9d38deeb5db7f17238716d1b7063/westpa-2022.6-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,684 Found link https://files.pythonhosted.org/packages/5a/92/aa1824fb725e27a260add68c68469ae301c2d4a3d2c790008ec3fba703ce/westpa-2022.6.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.6 2024-04-02T19:06:23,684 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/b3/fe/e3bf20c18ac5afc0852642eec32193ad81deb9b7adda100fdff77a5266b4/westpa-2022.7-cp310-cp310-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,685 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/00/70/5b4d0edae0f1361c26777ace62ea9f039e0c41bb02c978ef248cf62fa3ec/westpa-2022.7-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,685 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/16/12/d0af9cfab7e4d7577e74cca90b9254baec64a2b106a7760b1df2492a2489/westpa-2022.7-cp311-cp311-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,685 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/85/4c/cac7577c1a4e1b5a5425898f6959f5fd13f7dd4bf01439f66e2bea86f33f/westpa-2022.7-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,685 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/5a/74/f1d95abdfa598a5ba57f80b00c99ae294ed99625d73e9ad0b1e15b1549e4/westpa-2022.7-cp38-cp38-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,685 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/b8/86/bf99c43f9ee6c217a640b9aa796685113afc896858b0ee7349f881d1a266/westpa-2022.7-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,685 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/71/c1/dfc4adfefc2015e36344bdd26cb008be1d7662d3ff66dda56416d9f2cef1/westpa-2022.7-cp39-cp39-macosx_10_9_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,686 Skipping link: No binaries permitted for westpa: https://files.pythonhosted.org/packages/44/6a/7ca45b625aad6df7639d50d854849b55e29ad139ef48a12db4a41e24060c/westpa-2022.7-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:23,686 Found link https://files.pythonhosted.org/packages/8c/de/afb045a53b2f3d42e5344a8e05fd6acf81ad1cbba087ac8dd98997a7f07a/westpa-2022.7.tar.gz (from https://pypi.org/simple/westpa/) (requires-python:>=3.6), version: 2022.7 2024-04-02T19:06:23,687 Fetching project page and analyzing links: https://www.piwheels.org/simple/westpa/ 2024-04-02T19:06:23,687 Getting page https://www.piwheels.org/simple/westpa/ 2024-04-02T19:06:23,688 Found index url https://www.piwheels.org/simple/ 2024-04-02T19:06:25,307 Fetched page https://www.piwheels.org/simple/westpa/ as text/html 2024-04-02T19:06:25,351 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.7-cp311-cp311-linux_armv6l.whl#sha256=3ef7c09ad3e2ba10d9c28bec4169751eb4ded3f8f2b0a3bc267881e1de5ea3b7 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,352 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.7-cp311-cp311-linux_armv7l.whl#sha256=3ef7c09ad3e2ba10d9c28bec4169751eb4ded3f8f2b0a3bc267881e1de5ea3b7 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,353 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.7-cp37-cp37m-linux_armv6l.whl#sha256=f1dab22f377b59e5c26fa9c490642aba6fdcda30f50cd1f067cd037d6a720131 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,353 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.7-cp37-cp37m-linux_armv7l.whl#sha256=f1dab22f377b59e5c26fa9c490642aba6fdcda30f50cd1f067cd037d6a720131 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,354 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.6-cp311-cp311-linux_armv6l.whl#sha256=ba12693853c6dcaacba1d035f5e6aa3def0d21371816e587d18e4a933f7c035f (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,354 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.6-cp311-cp311-linux_armv7l.whl#sha256=ba12693853c6dcaacba1d035f5e6aa3def0d21371816e587d18e4a933f7c035f (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,355 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.6-cp37-cp37m-linux_armv6l.whl#sha256=f0d24e51f20acaff4676e922cb7957d6a29ad58d7dbb064e9012f0d2078164a7 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,355 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.6-cp37-cp37m-linux_armv7l.whl#sha256=f0d24e51f20acaff4676e922cb7957d6a29ad58d7dbb064e9012f0d2078164a7 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,356 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.6-cp39-cp39-linux_armv6l.whl#sha256=1a839dfdc313ba49bb1c0c35d19c198905a2931f3d9a2a32528c916660931942 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,356 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.6-cp39-cp39-linux_armv7l.whl#sha256=1a839dfdc313ba49bb1c0c35d19c198905a2931f3d9a2a32528c916660931942 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,357 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp39-cp39-linux_armv6l.whl#sha256=dc3a16c2582e1b713fdfc52b6504297d44e84e5c6e8538cdab3b603659b22d4b (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,357 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp39-cp39-linux_armv7l.whl#sha256=dc3a16c2582e1b713fdfc52b6504297d44e84e5c6e8538cdab3b603659b22d4b (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,358 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp37-cp37m-linux_armv6l.whl#sha256=6d321f54582ced0d7e39f606c95fadd59509a9692dc648daaa1067964429efee (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,358 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp37-cp37m-linux_armv7l.whl#sha256=6d321f54582ced0d7e39f606c95fadd59509a9692dc648daaa1067964429efee (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,359 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp311-cp311-linux_armv6l.whl#sha256=b0faadef12af0317d5a203bc2394d0103ac5951f19c32ee176f660dfc5eb48cd (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,359 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.5-cp311-cp311-linux_armv7l.whl#sha256=b0faadef12af0317d5a203bc2394d0103ac5951f19c32ee176f660dfc5eb48cd (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,359 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp37-cp37m-linux_armv6l.whl#sha256=67bc07f5def229a4155f399a75dcc7899dbdd1c38d53f3a68f1113b6cff39d10 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,360 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp37-cp37m-linux_armv7l.whl#sha256=67bc07f5def229a4155f399a75dcc7899dbdd1c38d53f3a68f1113b6cff39d10 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,360 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp39-cp39-linux_armv6l.whl#sha256=1adb91bb4eb598a71a766ccec6dc257cb4a4b6823fc6388930d564a72d0de8d7 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,361 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp39-cp39-linux_armv7l.whl#sha256=1adb91bb4eb598a71a766ccec6dc257cb4a4b6823fc6388930d564a72d0de8d7 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,361 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp311-cp311-linux_armv6l.whl#sha256=4afcdfd1bea38011a0a65e49241ece13ee58b58801d077339dca0a224bf5107c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,362 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.4-cp311-cp311-linux_armv7l.whl#sha256=4afcdfd1bea38011a0a65e49241ece13ee58b58801d077339dca0a224bf5107c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,362 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp39-cp39-linux_armv6l.whl#sha256=367492cb97cca120064cada5515b1f843953994d9b05bf528714ea59b506054e (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,363 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp39-cp39-linux_armv7l.whl#sha256=367492cb97cca120064cada5515b1f843953994d9b05bf528714ea59b506054e (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,363 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp37-cp37m-linux_armv6l.whl#sha256=aef03bdc7de5e2a121a7556fb13895722a03a5fffc6eaa42589479d0904f809c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,364 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp37-cp37m-linux_armv7l.whl#sha256=aef03bdc7de5e2a121a7556fb13895722a03a5fffc6eaa42589479d0904f809c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,364 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp311-cp311-linux_armv6l.whl#sha256=272241d7a53fe3a05244e6544515f6e7378dc1b002621d4368cee157816ab9a5 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,365 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.3-cp311-cp311-linux_armv7l.whl#sha256=272241d7a53fe3a05244e6544515f6e7378dc1b002621d4368cee157816ab9a5 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,365 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.2-cp311-cp311-linux_armv6l.whl#sha256=6ccd1589517abffb4502649b7d3d560036c9d8fcf497015967a53d6c81f29aea (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,366 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.2-cp311-cp311-linux_armv7l.whl#sha256=6ccd1589517abffb4502649b7d3d560036c9d8fcf497015967a53d6c81f29aea (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,366 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.2-cp37-cp37m-linux_armv6l.whl#sha256=bad9dd07c3ff32f2282482caedc0b82c861fea2adeb9a7f4c07f62fec17c82f5 (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,367 Skipping link: No binaries permitted for westpa: 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https://www.piwheels.org/simple/westpa/westpa-2022.1-cp37-cp37m-linux_armv6l.whl#sha256=f19822caaaa1c0fb2b7c1a7147429df8125c622b19f139f29a031e4aeeffe46c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,368 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.1-cp37-cp37m-linux_armv7l.whl#sha256=f19822caaaa1c0fb2b7c1a7147429df8125c622b19f139f29a031e4aeeffe46c (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,369 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.1-cp39-cp39-linux_armv6l.whl#sha256=20399dd4213b8187771d60f0f6a0aab6a48b8865887ba8e9c017318c1f19369d (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,369 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2022.1-cp39-cp39-linux_armv7l.whl#sha256=20399dd4213b8187771d60f0f6a0aab6a48b8865887ba8e9c017318c1f19369d (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,370 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0b5-cp311-cp311-linux_armv6l.whl#sha256=9f0593de33c94430b0a9806ee07880c9db8d1189512f3c3214e0e653cc6f494f (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,370 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-2.0b5-cp311-cp311-linux_armv7l.whl#sha256=9f0593de33c94430b0a9806ee07880c9db8d1189512f3c3214e0e653cc6f494f (from https://www.piwheels.org/simple/westpa/) (requires-python:>=3.6) 2024-04-02T19:06:25,371 Skipping link: No binaries permitted for westpa: 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https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,377 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.3-cp35-cp35m-linux_armv6l.whl#sha256=2d56e31ec6b4eb41aa74e6d9651effcd50d495f9344506d52c76dc17b3d8c273 (from https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,377 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.3-cp39-cp39-linux_armv6l.whl#sha256=ab08db8aa33ca1961dfe69ed87059da32ce65f1aa29d6bb022b7cab651f39766 (from https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,378 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.3-cp39-cp39-linux_armv7l.whl#sha256=ab08db8aa33ca1961dfe69ed87059da32ce65f1aa29d6bb022b7cab651f39766 (from https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,378 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp35-cp35m-linux_armv6l.whl#sha256=94be102c7e48aae37ae6d7e184182204193924634440f5439edddba2a23108db (from https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,379 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp35-cp35m-linux_armv7l.whl#sha256=94be102c7e48aae37ae6d7e184182204193924634440f5439edddba2a23108db (from https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,379 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp37-cp37m-linux_armv7l.whl#sha256=dee88fa69865b2bb166916e14cd5902f71b995e802ced263858b6d74197941fe (from https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,380 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp37-cp37m-linux_armv6l.whl#sha256=dee88fa69865b2bb166916e14cd5902f71b995e802ced263858b6d74197941fe (from https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,380 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp39-cp39-linux_armv6l.whl#sha256=8509f9b39ad64419d29b6f438ddb27216474513474b4f93982348610125b3bb8 (from https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,381 Skipping link: No binaries permitted for westpa: https://www.piwheels.org/simple/westpa/westpa-0.0.2-cp39-cp39-linux_armv7l.whl#sha256=8509f9b39ad64419d29b6f438ddb27216474513474b4f93982348610125b3bb8 (from https://www.piwheels.org/simple/westpa/) 2024-04-02T19:06:25,381 Skipping link: not a file: https://www.piwheels.org/simple/westpa/ 2024-04-02T19:06:25,382 Skipping link: not a file: https://pypi.org/simple/westpa/ 2024-04-02T19:06:25,413 Given no hashes to check 1 links for project 'westpa': discarding no candidates 2024-04-02T19:06:25,428 Collecting westpa==2022.7 2024-04-02T19:06:25,430 Created temporary directory: /tmp/pip-unpack-wk82i8_k 2024-04-02T19:06:25,476 Downloading westpa-2022.7.tar.gz (1.3 MB) 2024-04-02T19:06:26,243 Added westpa==2022.7 from https://files.pythonhosted.org/packages/8c/de/afb045a53b2f3d42e5344a8e05fd6acf81ad1cbba087ac8dd98997a7f07a/westpa-2022.7.tar.gz to build tracker '/tmp/pip-build-tracker-t6sib9oi' 2024-04-02T19:06:26,265 Created temporary directory: /tmp/pip-build-env-8_1i2g85 2024-04-02T19:06:26,275 Installing build dependencies: started 2024-04-02T19:06:26,276 Running command pip subprocess to install build dependencies 2024-04-02T19:06:27,429 Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2024-04-02T19:06:27,969 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-02T19:06:27,972 Ignoring Cython: markers 'python_version >= "3.10"' don't match your environment 2024-04-02T19:06:27,973 Ignoring oldest-supported-numpy: markers 'python_version < "3.9"' don't match your environment 2024-04-02T19:06:29,445 Collecting setuptools>=40.8.0 2024-04-02T19:06:29,462 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.2.0-py3-none-any.whl (821 kB) 2024-04-02T19:06:29,710 Collecting wheel 2024-04-02T19:06:29,727 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-04-02T19:06:31,078 Collecting Cython<3.0.3,>=0.29.16 2024-04-02T19:06:31,112 Downloading https://www.piwheels.org/simple/cython/Cython-3.0.2-cp39-cp39-linux_armv7l.whl (10.7 MB) 2024-04-02T19:06:43,248 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 10.7/10.7 MB 880.4 kB/s eta 0:00:00 2024-04-02T19:06:44,694 Collecting numpy<2,>=1.25.0 2024-04-02T19:06:45,945 Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.4-cp39-cp39-linux_armv7l.whl (5.6 MB) 2024-04-02T19:06:46,751 Collecting scipy>=0.19.1 2024-04-02T19:06:48,747 Using cached https://www.piwheels.org/simple/scipy/scipy-1.12.0-cp39-cp39-linux_armv7l.whl (25.2 MB) 2024-04-02T19:06:49,574 Collecting versioneer-518 2024-04-02T19:06:53,176 Using cached https://www.piwheels.org/simple/versioneer-518/versioneer_518-0.19-py2.py3-none-any.whl (17 kB) 2024-04-02T19:06:55,342 Installing collected packages: versioneer-518, wheel, setuptools, numpy, Cython, scipy 2024-04-02T19:06:55,603 Creating /tmp/pip-build-env-8_1i2g85/overlay/bin 2024-04-02T19:06:55,605 changing mode of /tmp/pip-build-env-8_1i2g85/overlay/bin/wheel to 755 2024-04-02T19:07:05,441 changing mode of /tmp/pip-build-env-8_1i2g85/overlay/bin/f2py to 755 2024-04-02T19:07:08,793 changing mode of /tmp/pip-build-env-8_1i2g85/overlay/bin/cygdb to 755 2024-04-02T19:07:08,795 changing mode of /tmp/pip-build-env-8_1i2g85/overlay/bin/cython to 755 2024-04-02T19:07:08,797 changing mode of /tmp/pip-build-env-8_1i2g85/overlay/bin/cythonize to 755 2024-04-02T19:07:22,819 Successfully installed Cython-3.0.2 numpy-1.26.4 scipy-1.12.0 setuptools-69.2.0 versioneer-518-0.19 wheel-0.43.0 2024-04-02T19:07:23,542 Installing build dependencies: finished with status 'done' 2024-04-02T19:07:23,547 Getting requirements to build wheel: started 2024-04-02T19:07:23,548 Running command Getting requirements to build wheel 2024-04-02T19:07:38,249 warning: src/westpa/core/reweight/_reweight.pyx:351:13: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2024-04-02T19:07:38,250 warning: src/westpa/core/reweight/_reweight.pyx:351:21: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2024-04-02T19:07:38,250 warning: src/westpa/core/reweight/_reweight.pyx:351:32: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2024-04-02T19:07:38,250 warning: src/westpa/core/reweight/_reweight.pyx:352:15: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2024-04-02T19:07:38,250 warning: src/westpa/core/reweight/_reweight.pyx:352:24: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2024-04-02T19:07:38,250 warning: src/westpa/core/reweight/_reweight.pyx:352:35: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2024-04-02T19:07:38,251 warning: src/westpa/core/reweight/_reweight.pyx:352:46: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2024-04-02T19:07:38,251 warning: src/westpa/core/reweight/_reweight.pyx:352:54: Non-trivial type declarators in shared declaration (e.g. mix of pointers and values). Each pointer declaration should be on its own line. 2024-04-02T19:07:47,669 Compiling src/westpa/fasthist/_fasthist.pyx because it changed. 2024-04-02T19:07:47,669 Compiling src/westpa/trajtree/_trajtree.pyx because it changed. 2024-04-02T19:07:47,669 Compiling src/westpa/mclib/_mclib.pyx because it changed. 2024-04-02T19:07:47,670 Compiling src/westpa/core/binning/_assign.pyx because it changed. 2024-04-02T19:07:47,670 Compiling src/westpa/core/kinetics/_kinetics.pyx because it changed. 2024-04-02T19:07:47,670 Compiling src/westpa/core/reweight/_reweight.pyx because it changed. 2024-04-02T19:07:47,670 [1/6] Cythonizing src/westpa/core/binning/_assign.pyx 2024-04-02T19:07:47,670 [2/6] Cythonizing src/westpa/core/kinetics/_kinetics.pyx 2024-04-02T19:07:47,670 [3/6] Cythonizing src/westpa/core/reweight/_reweight.pyx 2024-04-02T19:07:47,670 [4/6] Cythonizing src/westpa/fasthist/_fasthist.pyx 2024-04-02T19:07:47,671 [5/6] Cythonizing src/westpa/mclib/_mclib.pyx 2024-04-02T19:07:47,671 [6/6] Cythonizing src/westpa/trajtree/_trajtree.pyx 2024-04-02T19:07:47,726 /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/setuptools/dist.py:318: InformationOnly: Normalizing '2022.07' to '2022.7' 2024-04-02T19:07:47,726 self.metadata.version = self._normalize_version(self.metadata.version) 2024-04-02T19:07:47,767 running egg_info 2024-04-02T19:07:47,773 writing src/westpa.egg-info/PKG-INFO 2024-04-02T19:07:48,014 writing dependency_links to src/westpa.egg-info/dependency_links.txt 2024-04-02T19:07:48,017 writing entry points to src/westpa.egg-info/entry_points.txt 2024-04-02T19:07:48,021 writing requirements to src/westpa.egg-info/requires.txt 2024-04-02T19:07:48,022 writing top-level names to src/westpa.egg-info/top_level.txt 2024-04-02T19:07:48,082 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,083 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,083 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,083 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,083 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,083 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,083 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,084 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,084 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,084 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,084 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,084 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,084 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,084 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,085 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,085 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,085 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,085 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,085 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,085 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,085 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,085 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,086 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,086 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,086 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,086 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,086 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,086 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,086 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,087 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:48,092 reading manifest file 'src/westpa.egg-info/SOURCES.txt' 2024-04-02T19:07:48,098 reading manifest template 'MANIFEST.in' 2024-04-02T19:07:48,124 adding license file 'LICENSE' 2024-04-02T19:07:48,124 adding license file 'AUTHORS' 2024-04-02T19:07:48,134 writing manifest file 'src/westpa.egg-info/SOURCES.txt' 2024-04-02T19:07:48,689 Getting requirements to build wheel: finished with status 'done' 2024-04-02T19:07:48,699 Created temporary directory: /tmp/pip-modern-metadata-lpw5rukp 2024-04-02T19:07:48,702 Preparing metadata (pyproject.toml): started 2024-04-02T19:07:48,703 Running command Preparing metadata (pyproject.toml) 2024-04-02T19:07:50,486 /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/setuptools/dist.py:318: InformationOnly: Normalizing '2022.07' to '2022.7' 2024-04-02T19:07:50,487 self.metadata.version = self._normalize_version(self.metadata.version) 2024-04-02T19:07:50,530 running dist_info 2024-04-02T19:07:50,532 creating /tmp/pip-modern-metadata-lpw5rukp/westpa.egg-info 2024-04-02T19:07:50,538 writing /tmp/pip-modern-metadata-lpw5rukp/westpa.egg-info/PKG-INFO 2024-04-02T19:07:50,547 writing dependency_links to /tmp/pip-modern-metadata-lpw5rukp/westpa.egg-info/dependency_links.txt 2024-04-02T19:07:50,549 writing entry points to /tmp/pip-modern-metadata-lpw5rukp/westpa.egg-info/entry_points.txt 2024-04-02T19:07:50,553 writing requirements to /tmp/pip-modern-metadata-lpw5rukp/westpa.egg-info/requires.txt 2024-04-02T19:07:50,554 writing top-level names to /tmp/pip-modern-metadata-lpw5rukp/westpa.egg-info/top_level.txt 2024-04-02T19:07:50,555 writing manifest file '/tmp/pip-modern-metadata-lpw5rukp/westpa.egg-info/SOURCES.txt' 2024-04-02T19:07:50,592 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,592 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,592 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,592 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,592 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,593 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,593 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,593 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,593 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,593 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,593 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,593 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,593 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,594 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,594 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,594 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,594 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,594 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,594 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,594 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,595 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,595 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,595 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,595 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,595 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,595 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,595 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,595 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,596 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,596 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:07:50,600 reading manifest file '/tmp/pip-modern-metadata-lpw5rukp/westpa.egg-info/SOURCES.txt' 2024-04-02T19:07:50,603 reading manifest template 'MANIFEST.in' 2024-04-02T19:07:50,629 adding license file 'LICENSE' 2024-04-02T19:07:50,629 adding license file 'AUTHORS' 2024-04-02T19:07:50,636 writing manifest file '/tmp/pip-modern-metadata-lpw5rukp/westpa.egg-info/SOURCES.txt' 2024-04-02T19:07:50,642 creating '/tmp/pip-modern-metadata-lpw5rukp/westpa-2022.7.dist-info' 2024-04-02T19:07:50,874 Preparing metadata (pyproject.toml): finished with status 'done' 2024-04-02T19:07:50,880 Source in /tmp/pip-wheel-s27dq0_f/westpa_b016a06324fe41089fb1a8bd2ece8b81 has version 2022.7, which satisfies requirement westpa==2022.7 from https://files.pythonhosted.org/packages/8c/de/afb045a53b2f3d42e5344a8e05fd6acf81ad1cbba087ac8dd98997a7f07a/westpa-2022.7.tar.gz 2024-04-02T19:07:50,881 Removed westpa==2022.7 from https://files.pythonhosted.org/packages/8c/de/afb045a53b2f3d42e5344a8e05fd6acf81ad1cbba087ac8dd98997a7f07a/westpa-2022.7.tar.gz from build tracker '/tmp/pip-build-tracker-t6sib9oi' 2024-04-02T19:07:50,888 Created temporary directory: /tmp/pip-unpack-sx9g9npl 2024-04-02T19:07:50,889 Created temporary directory: /tmp/pip-unpack-5m4eiwd9 2024-04-02T19:07:50,933 Building wheels for collected packages: westpa 2024-04-02T19:07:50,937 Created temporary directory: /tmp/pip-wheel-u15819gk 2024-04-02T19:07:50,937 Destination directory: /tmp/pip-wheel-u15819gk 2024-04-02T19:07:50,939 Building wheel for westpa (pyproject.toml): started 2024-04-02T19:07:50,940 Running command Building wheel for westpa (pyproject.toml) 2024-04-02T19:07:52,643 /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/setuptools/dist.py:318: InformationOnly: Normalizing '2022.07' to '2022.7' 2024-04-02T19:07:52,643 self.metadata.version = self._normalize_version(self.metadata.version) 2024-04-02T19:07:52,728 running bdist_wheel 2024-04-02T19:07:52,746 running build 2024-04-02T19:07:52,747 running build_py 2024-04-02T19:07:52,752 creating build 2024-04-02T19:07:52,753 creating build/lib.linux-armv7l-cpython-39 2024-04-02T19:07:52,754 creating build/lib.linux-armv7l-cpython-39/westpa 2024-04-02T19:07:52,755 copying src/westpa/_version.py -> build/lib.linux-armv7l-cpython-39/westpa 2024-04-02T19:07:52,756 copying src/westpa/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa 2024-04-02T19:07:52,759 creating build/lib.linux-armv7l-cpython-39/westpa/analysis 2024-04-02T19:07:52,760 copying src/westpa/analysis/trajectories.py -> build/lib.linux-armv7l-cpython-39/westpa/analysis 2024-04-02T19:07:52,763 copying src/westpa/analysis/statistics.py -> build/lib.linux-armv7l-cpython-39/westpa/analysis 2024-04-02T19:07:52,764 copying src/westpa/analysis/core.py -> build/lib.linux-armv7l-cpython-39/westpa/analysis 2024-04-02T19:07:52,767 copying src/westpa/analysis/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/analysis 2024-04-02T19:07:52,769 creating build/lib.linux-armv7l-cpython-39/westpa/mclib 2024-04-02T19:07:52,770 copying src/westpa/mclib/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/mclib 2024-04-02T19:07:52,772 copying src/westpa/mclib/__main__.py -> build/lib.linux-armv7l-cpython-39/westpa/mclib 2024-04-02T19:07:52,774 creating build/lib.linux-armv7l-cpython-39/westpa/westext 2024-04-02T19:07:52,775 copying src/westpa/westext/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/westext 2024-04-02T19:07:52,777 creating build/lib.linux-armv7l-cpython-39/westpa/cli 2024-04-02T19:07:52,778 copying src/westpa/cli/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/cli 2024-04-02T19:07:52,780 creating build/lib.linux-armv7l-cpython-39/westpa/oldtools 2024-04-02T19:07:52,781 copying src/westpa/oldtools/miscfn.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools 2024-04-02T19:07:52,782 copying src/westpa/oldtools/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools 2024-04-02T19:07:52,784 copying src/westpa/oldtools/files.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools 2024-04-02T19:07:52,786 creating build/lib.linux-armv7l-cpython-39/westpa/work_managers 2024-04-02T19:07:52,787 copying src/westpa/work_managers/mpi.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers 2024-04-02T19:07:52,789 copying src/westpa/work_managers/processes.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers 2024-04-02T19:07:52,792 copying src/westpa/work_managers/environment.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers 2024-04-02T19:07:52,794 copying src/westpa/work_managers/threads.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers 2024-04-02T19:07:52,796 copying src/westpa/work_managers/core.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers 2024-04-02T19:07:52,798 copying src/westpa/work_managers/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers 2024-04-02T19:07:52,800 copying src/westpa/work_managers/serial.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers 2024-04-02T19:07:52,803 creating build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,804 copying src/westpa/core/systems.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,806 copying src/westpa/core/segment.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,808 copying src/westpa/core/extloader.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,810 copying src/westpa/core/textio.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,811 copying src/westpa/core/trajectory.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,814 copying src/westpa/core/wm_ops.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,815 copying src/westpa/core/sim_manager.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,818 copying src/westpa/core/h5io.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,821 copying src/westpa/core/states.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,823 copying src/westpa/core/data_manager.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,826 copying src/westpa/core/progress.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,829 copying src/westpa/core/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,830 copying src/westpa/core/we_driver.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,833 copying src/westpa/core/yamlcfg.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,835 copying src/westpa/core/_rc.py -> build/lib.linux-armv7l-cpython-39/westpa/core 2024-04-02T19:07:52,839 creating build/lib.linux-armv7l-cpython-39/westpa/fasthist 2024-04-02T19:07:52,839 copying src/westpa/fasthist/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/fasthist 2024-04-02T19:07:52,842 copying src/westpa/fasthist/__main__.py -> build/lib.linux-armv7l-cpython-39/westpa/fasthist 2024-04-02T19:07:52,845 creating build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,846 copying src/westpa/tools/data_reader.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,848 copying src/westpa/tools/wipi.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,851 copying src/westpa/tools/binning.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,853 copying src/westpa/tools/dtypes.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,855 copying src/westpa/tools/kinetics_tool.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,857 copying src/westpa/tools/plot.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,859 copying src/westpa/tools/progress.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,861 copying src/westpa/tools/core.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,863 copying src/westpa/tools/selected_segs.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,865 copying src/westpa/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,867 copying src/westpa/tools/iter_range.py -> build/lib.linux-armv7l-cpython-39/westpa/tools 2024-04-02T19:07:52,869 creating build/lib.linux-armv7l-cpython-39/westpa/trajtree 2024-04-02T19:07:52,870 copying src/westpa/trajtree/trajtree.py -> build/lib.linux-armv7l-cpython-39/westpa/trajtree 2024-04-02T19:07:52,872 copying src/westpa/trajtree/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/trajtree 2024-04-02T19:07:52,875 creating build/lib.linux-armv7l-cpython-39/westpa/westext/adaptvoronoi 2024-04-02T19:07:52,875 copying src/westpa/westext/adaptvoronoi/adaptVor_driver.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/adaptvoronoi 2024-04-02T19:07:52,878 copying src/westpa/westext/adaptvoronoi/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/adaptvoronoi 2024-04-02T19:07:52,880 creating build/lib.linux-armv7l-cpython-39/westpa/westext/weed 2024-04-02T19:07:52,881 copying src/westpa/westext/weed/UncertMath.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/weed 2024-04-02T19:07:52,883 copying src/westpa/westext/weed/weed_driver.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/weed 2024-04-02T19:07:52,885 copying src/westpa/westext/weed/BinCluster.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/weed 2024-04-02T19:07:52,887 copying src/westpa/westext/weed/ProbAdjustEquil.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/weed 2024-04-02T19:07:52,889 copying src/westpa/westext/weed/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/weed 2024-04-02T19:07:52,892 creating build/lib.linux-armv7l-cpython-39/westpa/westext/hamsm_restarting 2024-04-02T19:07:52,893 copying src/westpa/westext/hamsm_restarting/restart_driver.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/hamsm_restarting 2024-04-02T19:07:52,896 copying src/westpa/westext/hamsm_restarting/example_overrides.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/hamsm_restarting 2024-04-02T19:07:52,898 copying src/westpa/westext/hamsm_restarting/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/hamsm_restarting 2024-04-02T19:07:52,900 creating build/lib.linux-armv7l-cpython-39/westpa/westext/stringmethod 2024-04-02T19:07:52,901 copying src/westpa/westext/stringmethod/string_method.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/stringmethod 2024-04-02T19:07:52,903 copying src/westpa/westext/stringmethod/string_driver.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/stringmethod 2024-04-02T19:07:52,905 copying src/westpa/westext/stringmethod/fourier_fitting.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/stringmethod 2024-04-02T19:07:52,907 copying src/westpa/westext/stringmethod/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/stringmethod 2024-04-02T19:07:52,909 creating build/lib.linux-armv7l-cpython-39/westpa/westext/wess 2024-04-02T19:07:52,909 copying src/westpa/westext/wess/wess_driver.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/wess 2024-04-02T19:07:52,912 copying src/westpa/westext/wess/ProbAdjust.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/wess 2024-04-02T19:07:52,913 copying src/westpa/westext/wess/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/westext/wess 2024-04-02T19:07:52,916 creating build/lib.linux-armv7l-cpython-39/westpa/cli/core 2024-04-02T19:07:52,917 copying src/westpa/cli/core/w_init.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/core 2024-04-02T19:07:52,919 copying src/westpa/cli/core/w_run.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/core 2024-04-02T19:07:52,920 copying src/westpa/cli/core/w_fork.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/core 2024-04-02T19:07:52,922 copying src/westpa/cli/core/w_truncate.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/core 2024-04-02T19:07:52,924 copying src/westpa/cli/core/w_succ.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/core 2024-04-02T19:07:52,926 copying src/westpa/cli/core/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/core 2024-04-02T19:07:52,927 copying src/westpa/cli/core/w_states.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/core 2024-04-02T19:07:52,931 creating build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,932 copying src/westpa/cli/tools/w_reweight.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,934 copying src/westpa/cli/tools/w_pdist.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,937 copying src/westpa/cli/tools/w_fluxanl.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,939 copying src/westpa/cli/tools/plothist.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,942 copying src/westpa/cli/tools/w_bins.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,944 copying src/westpa/cli/tools/w_postanalysis_reweight.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,946 copying src/westpa/cli/tools/w_trace.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,948 copying src/westpa/cli/tools/ploterr.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,950 copying src/westpa/cli/tools/w_stateprobs.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,952 copying src/westpa/cli/tools/w_select.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,954 copying src/westpa/cli/tools/w_ntop.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,956 copying src/westpa/cli/tools/w_multi_west.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,959 copying src/westpa/cli/tools/w_assign.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,961 copying src/westpa/cli/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,963 copying src/westpa/cli/tools/w_dumpsegs.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,965 copying src/westpa/cli/tools/w_eddist.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,967 copying src/westpa/cli/tools/w_kinavg.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,969 copying src/westpa/cli/tools/w_ipa.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,972 copying src/westpa/cli/tools/w_direct.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,974 copying src/westpa/cli/tools/w_crawl.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,977 copying src/westpa/cli/tools/w_kinetics.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,978 copying src/westpa/cli/tools/w_red.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,980 copying src/westpa/cli/tools/w_postanalysis_matrix.py -> build/lib.linux-armv7l-cpython-39/westpa/cli/tools 2024-04-02T19:07:52,983 creating build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:52,984 copying src/westpa/oldtools/aframe/data_reader.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:52,986 copying src/westpa/oldtools/aframe/base_mixin.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:52,988 copying src/westpa/oldtools/aframe/trajwalker.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:52,990 copying src/westpa/oldtools/aframe/kinetics.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:52,992 copying src/westpa/oldtools/aframe/binning.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:52,994 copying src/westpa/oldtools/aframe/atool.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:52,996 copying src/westpa/oldtools/aframe/output.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:52,997 copying src/westpa/oldtools/aframe/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:52,999 copying src/westpa/oldtools/aframe/mcbs.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:53,001 copying src/westpa/oldtools/aframe/iter_range.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:53,003 copying src/westpa/oldtools/aframe/transitions.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:53,005 copying src/westpa/oldtools/aframe/plotting.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe 2024-04-02T19:07:53,007 creating build/lib.linux-armv7l-cpython-39/westpa/oldtools/stats 2024-04-02T19:07:53,008 copying src/westpa/oldtools/stats/accumulator.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/stats 2024-04-02T19:07:53,010 copying src/westpa/oldtools/stats/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/stats 2024-04-02T19:07:53,012 copying src/westpa/oldtools/stats/mcbs.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/stats 2024-04-02T19:07:53,014 copying src/westpa/oldtools/stats/edfs.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/stats 2024-04-02T19:07:53,016 creating build/lib.linux-armv7l-cpython-39/westpa/oldtools/cmds 2024-04-02T19:07:53,017 copying src/westpa/oldtools/cmds/w_ttimes.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/cmds 2024-04-02T19:07:53,019 copying src/westpa/oldtools/cmds/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/oldtools/cmds 2024-04-02T19:07:53,022 creating build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq 2024-04-02T19:07:53,022 copying src/westpa/work_managers/zeromq/work_manager.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq 2024-04-02T19:07:53,025 copying src/westpa/work_managers/zeromq/node.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq 2024-04-02T19:07:53,027 copying src/westpa/work_managers/zeromq/core.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq 2024-04-02T19:07:53,030 copying src/westpa/work_managers/zeromq/worker.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq 2024-04-02T19:07:53,032 copying src/westpa/work_managers/zeromq/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq 2024-04-02T19:07:53,034 creating build/lib.linux-armv7l-cpython-39/westpa/core/kinetics 2024-04-02T19:07:53,035 copying src/westpa/core/kinetics/rate_averaging.py -> build/lib.linux-armv7l-cpython-39/westpa/core/kinetics 2024-04-02T19:07:53,037 copying src/westpa/core/kinetics/events.py -> build/lib.linux-armv7l-cpython-39/westpa/core/kinetics 2024-04-02T19:07:53,039 copying src/westpa/core/kinetics/matrates.py -> build/lib.linux-armv7l-cpython-39/westpa/core/kinetics 2024-04-02T19:07:53,041 copying src/westpa/core/kinetics/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/core/kinetics 2024-04-02T19:07:53,043 creating build/lib.linux-armv7l-cpython-39/westpa/core/reweight 2024-04-02T19:07:53,044 copying src/westpa/core/reweight/matrix.py -> build/lib.linux-armv7l-cpython-39/westpa/core/reweight 2024-04-02T19:07:53,047 copying src/westpa/core/reweight/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/core/reweight 2024-04-02T19:07:53,049 creating build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,050 copying src/westpa/core/binning/binless_driver.py -> build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,052 copying src/westpa/core/binning/binless.py -> build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,053 copying src/westpa/core/binning/bins.py -> build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,055 copying src/westpa/core/binning/assign.py -> build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,057 copying src/westpa/core/binning/mab_manager.py -> build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,059 copying src/westpa/core/binning/binless_manager.py -> build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,062 copying src/westpa/core/binning/mab.py -> build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,064 copying src/westpa/core/binning/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,065 copying src/westpa/core/binning/mab_driver.py -> build/lib.linux-armv7l-cpython-39/westpa/core/binning 2024-04-02T19:07:53,068 creating build/lib.linux-armv7l-cpython-39/westpa/core/propagators 2024-04-02T19:07:53,069 copying src/westpa/core/propagators/__init__.py -> build/lib.linux-armv7l-cpython-39/westpa/core/propagators 2024-04-02T19:07:53,070 copying src/westpa/core/propagators/executable.py -> build/lib.linux-armv7l-cpython-39/westpa/core/propagators 2024-04-02T19:07:53,099 UPDATING build/lib.linux-armv7l-cpython-39/westpa/_version.py 2024-04-02T19:07:53,099 set build/lib.linux-armv7l-cpython-39/westpa/_version.py to '2022.07' 2024-04-02T19:07:53,100 running build_ext 2024-04-02T19:07:53,110 building 'westpa.fasthist._fasthist' extension 2024-04-02T19:07:53,110 creating build/temp.linux-armv7l-cpython-39 2024-04-02T19:07:53,111 creating build/temp.linux-armv7l-cpython-39/src 2024-04-02T19:07:53,112 creating build/temp.linux-armv7l-cpython-39/src/westpa 2024-04-02T19:07:53,112 creating build/temp.linux-armv7l-cpython-39/src/westpa/fasthist 2024-04-02T19:07:53,113 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/westpa/fasthist/_fasthist.c -o build/temp.linux-armv7l-cpython-39/src/westpa/fasthist/_fasthist.o -O3 2024-04-02T19:07:53,452 In file included from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-02T19:07:53,452 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-02T19:07:53,452 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-02T19:07:53,452 from src/westpa/fasthist/_fasthist.c:1179: 2024-04-02T19:07:53,452 /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-02T19:07:53,453 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-02T19:07:53,453 | ^~~~~~~ 2024-04-02T19:08:26,595 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/westpa/fasthist/_fasthist.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/westpa/fasthist/_fasthist.cpython-39-arm-linux-gnueabihf.so 2024-04-02T19:08:26,776 building 'westpa.trajtree._trajtree' extension 2024-04-02T19:08:26,776 creating build/temp.linux-armv7l-cpython-39/src/westpa/trajtree 2024-04-02T19:08:26,777 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/westpa/trajtree/_trajtree.c -o build/temp.linux-armv7l-cpython-39/src/westpa/trajtree/_trajtree.o -O3 2024-04-02T19:08:27,118 In file included from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-02T19:08:27,118 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-02T19:08:27,118 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-02T19:08:27,118 from src/westpa/trajtree/_trajtree.c:1179: 2024-04-02T19:08:27,119 /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-02T19:08:27,119 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-02T19:08:27,119 | ^~~~~~~ 2024-04-02T19:08:27,239 src/westpa/trajtree/_trajtree.c: In function ‘__pyx_f_6westpa_8trajtree_9_trajtree_14_trajtree_base__build_table’: 2024-04-02T19:08:27,241 src/westpa/trajtree/_trajtree.c:5888:35: warning: comparison of integer expressions of different signedness: ‘__pyx_t_5numpy_uint64_t’ {aka ‘long long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2024-04-02T19:08:27,241 5888 | for (__pyx_t_22 = 0; __pyx_t_22 < __pyx_t_27; __pyx_t_22+=1) { 2024-04-02T19:08:27,242 | ^ 2024-04-02T19:08:27,257 src/westpa/trajtree/_trajtree.c: In function ‘__pyx_f_6westpa_8trajtree_9_trajtree_14_trajtree_base_count_roots’: 2024-04-02T19:08:27,260 src/westpa/trajtree/_trajtree.c:6346:33: warning: comparison of integer expressions of different signedness: ‘__pyx_t_5numpy_uint64_t’ {aka ‘long long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2024-04-02T19:08:27,261 6346 | for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_8; __pyx_t_6+=1) { 2024-04-02T19:08:27,261 | ^ 2024-04-02T19:08:27,269 src/westpa/trajtree/_trajtree.c: In function ‘__pyx_f_6westpa_8trajtree_9_trajtree_14_trajtree_base_count_leaves’: 2024-04-02T19:08:27,272 src/westpa/trajtree/_trajtree.c:6646:33: warning: comparison of integer expressions of different signedness: ‘__pyx_t_5numpy_uint64_t’ {aka ‘long long unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare] 2024-04-02T19:08:27,273 6646 | for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_8; __pyx_t_6+=1) { 2024-04-02T19:08:27,273 | ^ 2024-04-02T19:08:41,260 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/westpa/trajtree/_trajtree.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/westpa/trajtree/_trajtree.cpython-39-arm-linux-gnueabihf.so 2024-04-02T19:08:41,401 building 'westpa.mclib._mclib' extension 2024-04-02T19:08:41,402 creating build/temp.linux-armv7l-cpython-39/src/westpa/mclib 2024-04-02T19:08:41,402 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/westpa/mclib/_mclib.c -o build/temp.linux-armv7l-cpython-39/src/westpa/mclib/_mclib.o -O3 2024-04-02T19:08:41,712 In file included from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-02T19:08:41,713 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-02T19:08:41,713 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-02T19:08:41,713 from src/westpa/mclib/_mclib.c:1179: 2024-04-02T19:08:41,713 /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-02T19:08:41,713 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-02T19:08:41,713 | ^~~~~~~ 2024-04-02T19:09:13,404 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/westpa/mclib/_mclib.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/westpa/mclib/_mclib.cpython-39-arm-linux-gnueabihf.so 2024-04-02T19:09:13,572 building 'westpa.core.binning._assign' extension 2024-04-02T19:09:13,573 creating build/temp.linux-armv7l-cpython-39/src/westpa/core 2024-04-02T19:09:13,573 creating build/temp.linux-armv7l-cpython-39/src/westpa/core/binning 2024-04-02T19:09:13,574 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/westpa/core/binning/_assign.c -o build/temp.linux-armv7l-cpython-39/src/westpa/core/binning/_assign.o -O3 2024-04-02T19:09:13,895 In file included from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-02T19:09:13,895 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-02T19:09:13,895 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-02T19:09:13,896 from src/westpa/core/binning/_assign.c:1179: 2024-04-02T19:09:13,896 /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-02T19:09:13,896 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-02T19:09:13,896 | ^~~~~~~ 2024-04-02T19:09:35,344 src/westpa/core/binning/_assign.c: In function ‘__pyx_pw_6westpa_4core_7binning_7_assign_1rectilinear_assign’: 2024-04-02T19:09:35,356 src/westpa/core/binning/_assign.c:20163:165: warning: ‘__pyx_v_index’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2024-04-02T19:09:35,356 20163 | *((__pyx_t_6westpa_4core_7binning_7_assign_index_t *) ( /* dim=0 */ (__pyx_v_output.data + __pyx_t_15 * __pyx_v_output.strides[0]) )) += (__pyx_v_index * __pyx_v_stridefac); 2024-04-02T19:09:35,356 | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ 2024-04-02T19:09:35,367 src/westpa/core/binning/_assign.c:19683:51: note: ‘__pyx_v_index’ was declared here 2024-04-02T19:09:35,367 19683 | __pyx_t_6westpa_4core_7binning_7_assign_index_t __pyx_v_index; 2024-04-02T19:09:35,367 | ^~~~~~~~~~~~~ 2024-04-02T19:09:47,538 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/westpa/core/binning/_assign.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/westpa/core/binning/_assign.cpython-39-arm-linux-gnueabihf.so 2024-04-02T19:09:47,710 building 'westpa.core.kinetics._kinetics' extension 2024-04-02T19:09:47,710 creating build/temp.linux-armv7l-cpython-39/src/westpa/core/kinetics 2024-04-02T19:09:47,711 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/westpa/core/kinetics/_kinetics.c -o build/temp.linux-armv7l-cpython-39/src/westpa/core/kinetics/_kinetics.o -O3 2024-04-02T19:09:48,030 In file included from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-02T19:09:48,031 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-02T19:09:48,031 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-02T19:09:48,031 from src/westpa/core/kinetics/_kinetics.c:1179: 2024-04-02T19:09:48,031 /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-02T19:09:48,031 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-02T19:09:48,031 | ^~~~~~~ 2024-04-02T19:10:27,380 src/westpa/core/kinetics/_kinetics.c: In function ‘__pyx_pw_6westpa_4core_8kinetics_9_kinetics_23sequence_macro_flux_to_rate’: 2024-04-02T19:10:27,381 src/westpa/core/kinetics/_kinetics.c:2425:79: warning: ‘__pyx_v_iiter’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2024-04-02T19:10:27,381 2425 | __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ 2024-04-02T19:10:27,382 | ^~ 2024-04-02T19:10:27,382 2426 | (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\ 2024-04-02T19:10:27,382 | 2024-04-02T19:10:27,396 src/westpa/core/kinetics/_kinetics.c:25363:14: note: ‘__pyx_v_iiter’ was declared here 2024-04-02T19:10:27,396 25363 | Py_ssize_t __pyx_v_iiter; 2024-04-02T19:10:27,396 | ^~~~~~~~~~~~~ 2024-04-02T19:10:32,303 src/westpa/core/kinetics/_kinetics.c: In function ‘__pyx_pw_6westpa_4core_8kinetics_9_kinetics_27find_macrostate_transitions’: 2024-04-02T19:10:32,317 src/westpa/core/kinetics/_kinetics.c:27776:105: warning: ‘__pyx_v_tm’ may be used uninitialized in this function [-Wmaybe-uninitialized] 2024-04-02T19:10:32,317 27776 | *((double *) ( /* dim=0 */ (__pyx_v__last_time.data + __pyx_t_8 * __pyx_v__last_time.strides[0]) )) = __pyx_v_tm; 2024-04-02T19:10:32,317 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-04-02T19:10:32,333 src/westpa/core/kinetics/_kinetics.c:27304:10: note: ‘__pyx_v_tm’ was declared here 2024-04-02T19:10:32,334 27304 | double __pyx_v_tm; 2024-04-02T19:10:32,334 | ^~~~~~~~~~ 2024-04-02T19:10:36,258 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/westpa/core/kinetics/_kinetics.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/westpa/core/kinetics/_kinetics.cpython-39-arm-linux-gnueabihf.so 2024-04-02T19:10:36,461 building 'westpa.core.reweight._reweight' extension 2024-04-02T19:10:36,462 creating build/temp.linux-armv7l-cpython-39/src/westpa/core/reweight 2024-04-02T19:10:36,463 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c src/westpa/core/reweight/_reweight.c -o build/temp.linux-armv7l-cpython-39/src/westpa/core/reweight/_reweight.o -O3 2024-04-02T19:10:36,777 In file included from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-02T19:10:36,778 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-02T19:10:36,778 from /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-02T19:10:36,778 from src/westpa/core/reweight/_reweight.c:1179: 2024-04-02T19:10:36,778 /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-02T19:10:36,778 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-02T19:10:36,779 | ^~~~~~~ 2024-04-02T19:11:16,603 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/westpa/core/reweight/_reweight.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/westpa/core/reweight/_reweight.cpython-39-arm-linux-gnueabihf.so 2024-04-02T19:11:16,814 UPDATING build/lib.linux-armv7l-cpython-39/westpa/_version.py 2024-04-02T19:11:16,814 set build/lib.linux-armv7l-cpython-39/westpa/_version.py to '2022.07' 2024-04-02T19:11:16,815 installing to build/bdist.linux-armv7l/wheel 2024-04-02T19:11:16,815 running install 2024-04-02T19:11:16,840 running install_lib 2024-04-02T19:11:16,849 creating build/bdist.linux-armv7l 2024-04-02T19:11:16,849 creating build/bdist.linux-armv7l/wheel 2024-04-02T19:11:16,851 creating build/bdist.linux-armv7l/wheel/westpa 2024-04-02T19:11:16,852 creating build/bdist.linux-armv7l/wheel/westpa/analysis 2024-04-02T19:11:16,853 copying build/lib.linux-armv7l-cpython-39/westpa/analysis/trajectories.py -> build/bdist.linux-armv7l/wheel/westpa/analysis 2024-04-02T19:11:16,856 copying build/lib.linux-armv7l-cpython-39/westpa/analysis/statistics.py -> build/bdist.linux-armv7l/wheel/westpa/analysis 2024-04-02T19:11:16,858 copying build/lib.linux-armv7l-cpython-39/westpa/analysis/core.py -> build/bdist.linux-armv7l/wheel/westpa/analysis 2024-04-02T19:11:16,860 copying build/lib.linux-armv7l-cpython-39/westpa/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/analysis 2024-04-02T19:11:16,862 creating build/bdist.linux-armv7l/wheel/westpa/mclib 2024-04-02T19:11:16,863 copying build/lib.linux-armv7l-cpython-39/westpa/mclib/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/mclib 2024-04-02T19:11:16,866 copying build/lib.linux-armv7l-cpython-39/westpa/mclib/_mclib.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/mclib 2024-04-02T19:11:16,897 copying build/lib.linux-armv7l-cpython-39/westpa/mclib/__main__.py -> build/bdist.linux-armv7l/wheel/westpa/mclib 2024-04-02T19:11:16,899 creating build/bdist.linux-armv7l/wheel/westpa/westext 2024-04-02T19:11:16,901 creating build/bdist.linux-armv7l/wheel/westpa/westext/adaptvoronoi 2024-04-02T19:11:16,901 copying build/lib.linux-armv7l-cpython-39/westpa/westext/adaptvoronoi/adaptVor_driver.py -> build/bdist.linux-armv7l/wheel/westpa/westext/adaptvoronoi 2024-04-02T19:11:16,904 copying build/lib.linux-armv7l-cpython-39/westpa/westext/adaptvoronoi/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext/adaptvoronoi 2024-04-02T19:11:16,906 creating build/bdist.linux-armv7l/wheel/westpa/westext/weed 2024-04-02T19:11:16,907 copying build/lib.linux-armv7l-cpython-39/westpa/westext/weed/UncertMath.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2024-04-02T19:11:16,909 copying build/lib.linux-armv7l-cpython-39/westpa/westext/weed/weed_driver.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2024-04-02T19:11:16,911 copying build/lib.linux-armv7l-cpython-39/westpa/westext/weed/BinCluster.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2024-04-02T19:11:16,913 copying build/lib.linux-armv7l-cpython-39/westpa/westext/weed/ProbAdjustEquil.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2024-04-02T19:11:16,915 copying build/lib.linux-armv7l-cpython-39/westpa/westext/weed/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext/weed 2024-04-02T19:11:16,916 copying build/lib.linux-armv7l-cpython-39/westpa/westext/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext 2024-04-02T19:11:16,918 creating build/bdist.linux-armv7l/wheel/westpa/westext/hamsm_restarting 2024-04-02T19:11:16,919 copying build/lib.linux-armv7l-cpython-39/westpa/westext/hamsm_restarting/restart_driver.py -> build/bdist.linux-armv7l/wheel/westpa/westext/hamsm_restarting 2024-04-02T19:11:16,922 copying build/lib.linux-armv7l-cpython-39/westpa/westext/hamsm_restarting/example_overrides.py -> build/bdist.linux-armv7l/wheel/westpa/westext/hamsm_restarting 2024-04-02T19:11:16,924 copying build/lib.linux-armv7l-cpython-39/westpa/westext/hamsm_restarting/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext/hamsm_restarting 2024-04-02T19:11:16,926 creating build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2024-04-02T19:11:16,927 copying build/lib.linux-armv7l-cpython-39/westpa/westext/stringmethod/string_method.py -> build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2024-04-02T19:11:16,929 copying build/lib.linux-armv7l-cpython-39/westpa/westext/stringmethod/string_driver.py -> build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2024-04-02T19:11:16,932 copying build/lib.linux-armv7l-cpython-39/westpa/westext/stringmethod/fourier_fitting.py -> build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2024-04-02T19:11:16,933 copying build/lib.linux-armv7l-cpython-39/westpa/westext/stringmethod/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext/stringmethod 2024-04-02T19:11:16,935 creating build/bdist.linux-armv7l/wheel/westpa/westext/wess 2024-04-02T19:11:16,936 copying build/lib.linux-armv7l-cpython-39/westpa/westext/wess/wess_driver.py -> build/bdist.linux-armv7l/wheel/westpa/westext/wess 2024-04-02T19:11:16,938 copying build/lib.linux-armv7l-cpython-39/westpa/westext/wess/ProbAdjust.py -> build/bdist.linux-armv7l/wheel/westpa/westext/wess 2024-04-02T19:11:16,940 copying build/lib.linux-armv7l-cpython-39/westpa/westext/wess/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/westext/wess 2024-04-02T19:11:16,942 creating build/bdist.linux-armv7l/wheel/westpa/cli 2024-04-02T19:11:16,943 creating build/bdist.linux-armv7l/wheel/westpa/cli/core 2024-04-02T19:11:16,944 copying build/lib.linux-armv7l-cpython-39/westpa/cli/core/w_init.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2024-04-02T19:11:16,947 copying build/lib.linux-armv7l-cpython-39/westpa/cli/core/w_run.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2024-04-02T19:11:16,948 copying build/lib.linux-armv7l-cpython-39/westpa/cli/core/w_fork.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2024-04-02T19:11:16,951 copying build/lib.linux-armv7l-cpython-39/westpa/cli/core/w_truncate.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2024-04-02T19:11:16,952 copying build/lib.linux-armv7l-cpython-39/westpa/cli/core/w_succ.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2024-04-02T19:11:16,954 copying build/lib.linux-armv7l-cpython-39/westpa/cli/core/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2024-04-02T19:11:16,955 copying build/lib.linux-armv7l-cpython-39/westpa/cli/core/w_states.py -> build/bdist.linux-armv7l/wheel/westpa/cli/core 2024-04-02T19:11:16,958 creating build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,959 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_reweight.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,962 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_pdist.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,964 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_fluxanl.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,967 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/plothist.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,970 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_bins.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,972 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_postanalysis_reweight.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,974 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_trace.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,976 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/ploterr.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,978 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_stateprobs.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,980 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_select.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,982 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_ntop.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,984 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_multi_west.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,987 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_assign.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,989 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,991 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_dumpsegs.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,993 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_eddist.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,995 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_kinavg.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:16,997 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_ipa.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:17,000 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_direct.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:17,002 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_crawl.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:17,004 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_kinetics.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:17,006 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_red.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:17,008 copying build/lib.linux-armv7l-cpython-39/westpa/cli/tools/w_postanalysis_matrix.py -> build/bdist.linux-armv7l/wheel/westpa/cli/tools 2024-04-02T19:11:17,010 copying build/lib.linux-armv7l-cpython-39/westpa/cli/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/cli 2024-04-02T19:11:17,012 creating build/bdist.linux-armv7l/wheel/westpa/oldtools 2024-04-02T19:11:17,013 creating build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,014 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/data_reader.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,017 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/base_mixin.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,018 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/trajwalker.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,020 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/kinetics.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,022 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/binning.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,024 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/atool.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,026 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/output.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,028 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,030 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/mcbs.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,032 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/iter_range.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,034 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/transitions.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,036 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/aframe/plotting.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/aframe 2024-04-02T19:11:17,038 creating build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2024-04-02T19:11:17,039 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/stats/accumulator.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2024-04-02T19:11:17,041 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/stats/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2024-04-02T19:11:17,042 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/stats/mcbs.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2024-04-02T19:11:17,044 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/stats/edfs.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/stats 2024-04-02T19:11:17,046 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/miscfn.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools 2024-04-02T19:11:17,047 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools 2024-04-02T19:11:17,049 creating build/bdist.linux-armv7l/wheel/westpa/oldtools/cmds 2024-04-02T19:11:17,050 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/cmds/w_ttimes.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/cmds 2024-04-02T19:11:17,053 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/cmds/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools/cmds 2024-04-02T19:11:17,054 copying build/lib.linux-armv7l-cpython-39/westpa/oldtools/files.py -> build/bdist.linux-armv7l/wheel/westpa/oldtools 2024-04-02T19:11:17,056 copying build/lib.linux-armv7l-cpython-39/westpa/_version.py -> build/bdist.linux-armv7l/wheel/westpa 2024-04-02T19:11:17,058 creating build/bdist.linux-armv7l/wheel/westpa/work_managers 2024-04-02T19:11:17,059 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/mpi.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2024-04-02T19:11:17,061 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/processes.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2024-04-02T19:11:17,063 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/environment.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2024-04-02T19:11:17,066 creating build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2024-04-02T19:11:17,067 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq/work_manager.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2024-04-02T19:11:17,069 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq/node.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2024-04-02T19:11:17,071 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq/core.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2024-04-02T19:11:17,074 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq/worker.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2024-04-02T19:11:17,076 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/zeromq/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers/zeromq 2024-04-02T19:11:17,078 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/threads.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2024-04-02T19:11:17,079 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/core.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2024-04-02T19:11:17,082 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2024-04-02T19:11:17,083 copying build/lib.linux-armv7l-cpython-39/westpa/work_managers/serial.py -> build/bdist.linux-armv7l/wheel/westpa/work_managers 2024-04-02T19:11:17,086 creating build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,086 copying build/lib.linux-armv7l-cpython-39/westpa/core/systems.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,089 copying build/lib.linux-armv7l-cpython-39/westpa/core/segment.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,090 copying build/lib.linux-armv7l-cpython-39/westpa/core/extloader.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,092 copying build/lib.linux-armv7l-cpython-39/westpa/core/textio.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,094 copying build/lib.linux-armv7l-cpython-39/westpa/core/trajectory.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,096 copying build/lib.linux-armv7l-cpython-39/westpa/core/wm_ops.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,098 copying build/lib.linux-armv7l-cpython-39/westpa/core/sim_manager.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,100 copying build/lib.linux-armv7l-cpython-39/westpa/core/h5io.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,103 copying build/lib.linux-armv7l-cpython-39/westpa/core/states.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,105 copying build/lib.linux-armv7l-cpython-39/westpa/core/data_manager.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,109 creating build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2024-04-02T19:11:17,110 copying build/lib.linux-armv7l-cpython-39/westpa/core/kinetics/rate_averaging.py -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2024-04-02T19:11:17,112 copying build/lib.linux-armv7l-cpython-39/westpa/core/kinetics/events.py -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2024-04-02T19:11:17,114 copying build/lib.linux-armv7l-cpython-39/westpa/core/kinetics/matrates.py -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2024-04-02T19:11:17,116 copying build/lib.linux-armv7l-cpython-39/westpa/core/kinetics/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2024-04-02T19:11:17,118 copying build/lib.linux-armv7l-cpython-39/westpa/core/kinetics/_kinetics.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/core/kinetics 2024-04-02T19:11:17,150 copying build/lib.linux-armv7l-cpython-39/westpa/core/progress.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,153 creating build/bdist.linux-armv7l/wheel/westpa/core/reweight 2024-04-02T19:11:17,154 copying build/lib.linux-armv7l-cpython-39/westpa/core/reweight/matrix.py -> build/bdist.linux-armv7l/wheel/westpa/core/reweight 2024-04-02T19:11:17,156 copying build/lib.linux-armv7l-cpython-39/westpa/core/reweight/_reweight.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/core/reweight 2024-04-02T19:11:17,180 copying build/lib.linux-armv7l-cpython-39/westpa/core/reweight/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core/reweight 2024-04-02T19:11:17,182 creating build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,183 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/binless_driver.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,185 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/binless.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,187 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/bins.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,190 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/assign.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,192 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/mab_manager.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,195 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/binless_manager.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,197 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/mab.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,200 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,202 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/mab_driver.py -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,204 copying build/lib.linux-armv7l-cpython-39/westpa/core/binning/_assign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/core/binning 2024-04-02T19:11:17,229 copying build/lib.linux-armv7l-cpython-39/westpa/core/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,231 creating build/bdist.linux-armv7l/wheel/westpa/core/propagators 2024-04-02T19:11:17,232 copying build/lib.linux-armv7l-cpython-39/westpa/core/propagators/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/core/propagators 2024-04-02T19:11:17,234 copying build/lib.linux-armv7l-cpython-39/westpa/core/propagators/executable.py -> build/bdist.linux-armv7l/wheel/westpa/core/propagators 2024-04-02T19:11:17,237 copying build/lib.linux-armv7l-cpython-39/westpa/core/we_driver.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,240 copying build/lib.linux-armv7l-cpython-39/westpa/core/yamlcfg.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,243 copying build/lib.linux-armv7l-cpython-39/westpa/core/_rc.py -> build/bdist.linux-armv7l/wheel/westpa/core 2024-04-02T19:11:17,246 creating build/bdist.linux-armv7l/wheel/westpa/fasthist 2024-04-02T19:11:17,247 copying build/lib.linux-armv7l-cpython-39/westpa/fasthist/_fasthist.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/fasthist 2024-04-02T19:11:17,275 copying build/lib.linux-armv7l-cpython-39/westpa/fasthist/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/fasthist 2024-04-02T19:11:17,277 copying build/lib.linux-armv7l-cpython-39/westpa/fasthist/__main__.py -> build/bdist.linux-armv7l/wheel/westpa/fasthist 2024-04-02T19:11:17,279 creating build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,281 copying build/lib.linux-armv7l-cpython-39/westpa/tools/data_reader.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,283 copying build/lib.linux-armv7l-cpython-39/westpa/tools/wipi.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,286 copying build/lib.linux-armv7l-cpython-39/westpa/tools/binning.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,289 copying build/lib.linux-armv7l-cpython-39/westpa/tools/dtypes.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,290 copying build/lib.linux-armv7l-cpython-39/westpa/tools/kinetics_tool.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,294 copying build/lib.linux-armv7l-cpython-39/westpa/tools/plot.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,296 copying build/lib.linux-armv7l-cpython-39/westpa/tools/progress.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,298 copying build/lib.linux-armv7l-cpython-39/westpa/tools/core.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,302 copying build/lib.linux-armv7l-cpython-39/westpa/tools/selected_segs.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,305 copying build/lib.linux-armv7l-cpython-39/westpa/tools/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,307 copying build/lib.linux-armv7l-cpython-39/westpa/tools/iter_range.py -> build/bdist.linux-armv7l/wheel/westpa/tools 2024-04-02T19:11:17,310 creating build/bdist.linux-armv7l/wheel/westpa/trajtree 2024-04-02T19:11:17,311 copying build/lib.linux-armv7l-cpython-39/westpa/trajtree/_trajtree.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/westpa/trajtree 2024-04-02T19:11:17,323 copying build/lib.linux-armv7l-cpython-39/westpa/trajtree/trajtree.py -> build/bdist.linux-armv7l/wheel/westpa/trajtree 2024-04-02T19:11:17,326 copying build/lib.linux-armv7l-cpython-39/westpa/trajtree/__init__.py -> build/bdist.linux-armv7l/wheel/westpa/trajtree 2024-04-02T19:11:17,328 copying build/lib.linux-armv7l-cpython-39/westpa/__init__.py -> build/bdist.linux-armv7l/wheel/westpa 2024-04-02T19:11:17,329 running install_egg_info 2024-04-02T19:11:17,343 running egg_info 2024-04-02T19:11:17,348 writing src/westpa.egg-info/PKG-INFO 2024-04-02T19:11:17,357 writing dependency_links to src/westpa.egg-info/dependency_links.txt 2024-04-02T19:11:17,359 writing entry points to src/westpa.egg-info/entry_points.txt 2024-04-02T19:11:17,364 writing requirements to src/westpa.egg-info/requires.txt 2024-04-02T19:11:17,365 writing top-level names to src/westpa.egg-info/top_level.txt 2024-04-02T19:11:17,410 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,411 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,411 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,412 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,412 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,412 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,413 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,413 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,413 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,414 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,414 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,415 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,415 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,415 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,416 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,416 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,417 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,417 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,418 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,418 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,419 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,419 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,420 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,420 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,421 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,422 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,422 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,423 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,423 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,424 dependency /tmp/pip-build-env-8_1i2g85/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative 2024-04-02T19:11:17,433 reading manifest file 'src/westpa.egg-info/SOURCES.txt' 2024-04-02T19:11:17,443 reading manifest template 'MANIFEST.in' 2024-04-02T19:11:17,546 adding license file 'LICENSE' 2024-04-02T19:11:17,547 adding license file 'AUTHORS' 2024-04-02T19:11:17,557 writing manifest file 'src/westpa.egg-info/SOURCES.txt' 2024-04-02T19:11:17,564 Copying src/westpa.egg-info to build/bdist.linux-armv7l/wheel/westpa-2022.7-py3.9.egg-info 2024-04-02T19:11:17,578 running install_scripts 2024-04-02T19:11:17,636 creating build/bdist.linux-armv7l/wheel/westpa-2022.7.dist-info/WHEEL 2024-04-02T19:11:17,639 creating '/tmp/pip-wheel-u15819gk/.tmp-cmi445hi/westpa-2022.7-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-02T19:11:17,641 adding 'westpa/__init__.py' 2024-04-02T19:11:17,643 adding 'westpa/_version.py' 2024-04-02T19:11:17,644 adding 'westpa/analysis/__init__.py' 2024-04-02T19:11:17,648 adding 'westpa/analysis/core.py' 2024-04-02T19:11:17,649 adding 'westpa/analysis/statistics.py' 2024-04-02T19:11:17,652 adding 'westpa/analysis/trajectories.py' 2024-04-02T19:11:17,653 adding 'westpa/cli/__init__.py' 2024-04-02T19:11:17,655 adding 'westpa/cli/core/__init__.py' 2024-04-02T19:11:17,657 adding 'westpa/cli/core/w_fork.py' 2024-04-02T19:11:17,659 adding 'westpa/cli/core/w_init.py' 2024-04-02T19:11:17,661 adding 'westpa/cli/core/w_run.py' 2024-04-02T19:11:17,663 adding 'westpa/cli/core/w_states.py' 2024-04-02T19:11:17,664 adding 'westpa/cli/core/w_succ.py' 2024-04-02T19:11:17,666 adding 'westpa/cli/core/w_truncate.py' 2024-04-02T19:11:17,668 adding 'westpa/cli/tools/__init__.py' 2024-04-02T19:11:17,670 adding 'westpa/cli/tools/ploterr.py' 2024-04-02T19:11:17,674 adding 'westpa/cli/tools/plothist.py' 2024-04-02T19:11:17,678 adding 'westpa/cli/tools/w_assign.py' 2024-04-02T19:11:17,680 adding 'westpa/cli/tools/w_bins.py' 2024-04-02T19:11:17,681 adding 'westpa/cli/tools/w_crawl.py' 2024-04-02T19:11:17,684 adding 'westpa/cli/tools/w_direct.py' 2024-04-02T19:11:17,686 adding 'westpa/cli/tools/w_dumpsegs.py' 2024-04-02T19:11:17,689 adding 'westpa/cli/tools/w_eddist.py' 2024-04-02T19:11:17,692 adding 'westpa/cli/tools/w_fluxanl.py' 2024-04-02T19:11:17,697 adding 'westpa/cli/tools/w_ipa.py' 2024-04-02T19:11:17,699 adding 'westpa/cli/tools/w_kinavg.py' 2024-04-02T19:11:17,701 adding 'westpa/cli/tools/w_kinetics.py' 2024-04-02T19:11:17,704 adding 'westpa/cli/tools/w_multi_west.py' 2024-04-02T19:11:17,706 adding 'westpa/cli/tools/w_ntop.py' 2024-04-02T19:11:17,709 adding 'westpa/cli/tools/w_pdist.py' 2024-04-02T19:11:17,711 adding 'westpa/cli/tools/w_postanalysis_matrix.py' 2024-04-02T19:11:17,713 adding 'westpa/cli/tools/w_postanalysis_reweight.py' 2024-04-02T19:11:17,715 adding 'westpa/cli/tools/w_red.py' 2024-04-02T19:11:17,719 adding 'westpa/cli/tools/w_reweight.py' 2024-04-02T19:11:17,722 adding 'westpa/cli/tools/w_select.py' 2024-04-02T19:11:17,723 adding 'westpa/cli/tools/w_stateprobs.py' 2024-04-02T19:11:17,727 adding 'westpa/cli/tools/w_trace.py' 2024-04-02T19:11:17,729 adding 'westpa/core/__init__.py' 2024-04-02T19:11:17,732 adding 'westpa/core/_rc.py' 2024-04-02T19:11:17,741 adding 'westpa/core/data_manager.py' 2024-04-02T19:11:17,743 adding 'westpa/core/extloader.py' 2024-04-02T19:11:17,748 adding 'westpa/core/h5io.py' 2024-04-02T19:11:17,750 adding 'westpa/core/progress.py' 2024-04-02T19:11:17,752 adding 'westpa/core/segment.py' 2024-04-02T19:11:17,757 adding 'westpa/core/sim_manager.py' 2024-04-02T19:11:17,762 adding 'westpa/core/states.py' 2024-04-02T19:11:17,764 adding 'westpa/core/systems.py' 2024-04-02T19:11:17,766 adding 'westpa/core/textio.py' 2024-04-02T19:11:17,768 adding 'westpa/core/trajectory.py' 2024-04-02T19:11:17,773 adding 'westpa/core/we_driver.py' 2024-04-02T19:11:17,775 adding 'westpa/core/wm_ops.py' 2024-04-02T19:11:17,777 adding 'westpa/core/yamlcfg.py' 2024-04-02T19:11:17,779 adding 'westpa/core/binning/__init__.py' 2024-04-02T19:11:18,052 adding 'westpa/core/binning/_assign.cpython-39-arm-linux-gnueabihf.so' 2024-04-02T19:11:18,064 adding 'westpa/core/binning/assign.py' 2024-04-02T19:11:18,065 adding 'westpa/core/binning/binless.py' 2024-04-02T19:11:18,067 adding 'westpa/core/binning/binless_driver.py' 2024-04-02T19:11:18,069 adding 'westpa/core/binning/binless_manager.py' 2024-04-02T19:11:18,071 adding 'westpa/core/binning/bins.py' 2024-04-02T19:11:18,073 adding 'westpa/core/binning/mab.py' 2024-04-02T19:11:18,075 adding 'westpa/core/binning/mab_driver.py' 2024-04-02T19:11:18,077 adding 'westpa/core/binning/mab_manager.py' 2024-04-02T19:11:18,078 adding 'westpa/core/kinetics/__init__.py' 2024-04-02T19:11:18,452 adding 'westpa/core/kinetics/_kinetics.cpython-39-arm-linux-gnueabihf.so' 2024-04-02T19:11:18,467 adding 'westpa/core/kinetics/events.py' 2024-04-02T19:11:18,469 adding 'westpa/core/kinetics/matrates.py' 2024-04-02T19:11:18,471 adding 'westpa/core/kinetics/rate_averaging.py' 2024-04-02T19:11:18,473 adding 'westpa/core/propagators/__init__.py' 2024-04-02T19:11:18,477 adding 'westpa/core/propagators/executable.py' 2024-04-02T19:11:18,479 adding 'westpa/core/reweight/__init__.py' 2024-04-02T19:11:18,776 adding 'westpa/core/reweight/_reweight.cpython-39-arm-linux-gnueabihf.so' 2024-04-02T19:11:18,788 adding 'westpa/core/reweight/matrix.py' 2024-04-02T19:11:18,790 adding 'westpa/fasthist/__init__.py' 2024-04-02T19:11:18,791 adding 'westpa/fasthist/__main__.py' 2024-04-02T19:11:19,090 adding 'westpa/fasthist/_fasthist.cpython-39-arm-linux-gnueabihf.so' 2024-04-02T19:11:19,102 adding 'westpa/mclib/__init__.py' 2024-04-02T19:11:19,104 adding 'westpa/mclib/__main__.py' 2024-04-02T19:11:19,392 adding 'westpa/mclib/_mclib.cpython-39-arm-linux-gnueabihf.so' 2024-04-02T19:11:19,403 adding 'westpa/oldtools/__init__.py' 2024-04-02T19:11:19,404 adding 'westpa/oldtools/files.py' 2024-04-02T19:11:19,406 adding 'westpa/oldtools/miscfn.py' 2024-04-02T19:11:19,408 adding 'westpa/oldtools/aframe/__init__.py' 2024-04-02T19:11:19,409 adding 'westpa/oldtools/aframe/atool.py' 2024-04-02T19:11:19,411 adding 'westpa/oldtools/aframe/base_mixin.py' 2024-04-02T19:11:19,413 adding 'westpa/oldtools/aframe/binning.py' 2024-04-02T19:11:19,416 adding 'westpa/oldtools/aframe/data_reader.py' 2024-04-02T19:11:19,418 adding 'westpa/oldtools/aframe/iter_range.py' 2024-04-02T19:11:19,420 adding 'westpa/oldtools/aframe/kinetics.py' 2024-04-02T19:11:19,421 adding 'westpa/oldtools/aframe/mcbs.py' 2024-04-02T19:11:19,423 adding 'westpa/oldtools/aframe/output.py' 2024-04-02T19:11:19,425 adding 'westpa/oldtools/aframe/plotting.py' 2024-04-02T19:11:19,426 adding 'westpa/oldtools/aframe/trajwalker.py' 2024-04-02T19:11:19,429 adding 'westpa/oldtools/aframe/transitions.py' 2024-04-02T19:11:19,431 adding 'westpa/oldtools/cmds/__init__.py' 2024-04-02T19:11:19,433 adding 'westpa/oldtools/cmds/w_ttimes.py' 2024-04-02T19:11:19,435 adding 'westpa/oldtools/stats/__init__.py' 2024-04-02T19:11:19,437 adding 'westpa/oldtools/stats/accumulator.py' 2024-04-02T19:11:19,438 adding 'westpa/oldtools/stats/edfs.py' 2024-04-02T19:11:19,440 adding 'westpa/oldtools/stats/mcbs.py' 2024-04-02T19:11:19,442 adding 'westpa/tools/__init__.py' 2024-04-02T19:11:19,445 adding 'westpa/tools/binning.py' 2024-04-02T19:11:19,447 adding 'westpa/tools/core.py' 2024-04-02T19:11:19,449 adding 'westpa/tools/data_reader.py' 2024-04-02T19:11:19,451 adding 'westpa/tools/dtypes.py' 2024-04-02T19:11:19,453 adding 'westpa/tools/iter_range.py' 2024-04-02T19:11:19,455 adding 'westpa/tools/kinetics_tool.py' 2024-04-02T19:11:19,458 adding 'westpa/tools/plot.py' 2024-04-02T19:11:19,459 adding 'westpa/tools/progress.py' 2024-04-02T19:11:19,461 adding 'westpa/tools/selected_segs.py' 2024-04-02T19:11:19,465 adding 'westpa/tools/wipi.py' 2024-04-02T19:11:19,466 adding 'westpa/trajtree/__init__.py' 2024-04-02T19:11:19,606 adding 'westpa/trajtree/_trajtree.cpython-39-arm-linux-gnueabihf.so' 2024-04-02T19:11:19,612 adding 'westpa/trajtree/trajtree.py' 2024-04-02T19:11:19,614 adding 'westpa/westext/__init__.py' 2024-04-02T19:11:19,616 adding 'westpa/westext/adaptvoronoi/__init__.py' 2024-04-02T19:11:19,618 adding 'westpa/westext/adaptvoronoi/adaptVor_driver.py' 2024-04-02T19:11:19,619 adding 'westpa/westext/hamsm_restarting/__init__.py' 2024-04-02T19:11:19,621 adding 'westpa/westext/hamsm_restarting/example_overrides.py' 2024-04-02T19:11:19,628 adding 'westpa/westext/hamsm_restarting/restart_driver.py' 2024-04-02T19:11:19,630 adding 'westpa/westext/stringmethod/__init__.py' 2024-04-02T19:11:19,632 adding 'westpa/westext/stringmethod/fourier_fitting.py' 2024-04-02T19:11:19,634 adding 'westpa/westext/stringmethod/string_driver.py' 2024-04-02T19:11:19,636 adding 'westpa/westext/stringmethod/string_method.py' 2024-04-02T19:11:19,639 adding 'westpa/westext/weed/BinCluster.py' 2024-04-02T19:11:19,640 adding 'westpa/westext/weed/ProbAdjustEquil.py' 2024-04-02T19:11:19,642 adding 'westpa/westext/weed/UncertMath.py' 2024-04-02T19:11:19,644 adding 'westpa/westext/weed/__init__.py' 2024-04-02T19:11:19,646 adding 'westpa/westext/weed/weed_driver.py' 2024-04-02T19:11:19,648 adding 'westpa/westext/wess/ProbAdjust.py' 2024-04-02T19:11:19,649 adding 'westpa/westext/wess/__init__.py' 2024-04-02T19:11:19,651 adding 'westpa/westext/wess/wess_driver.py' 2024-04-02T19:11:19,653 adding 'westpa/work_managers/__init__.py' 2024-04-02T19:11:19,656 adding 'westpa/work_managers/core.py' 2024-04-02T19:11:19,658 adding 'westpa/work_managers/environment.py' 2024-04-02T19:11:19,660 adding 'westpa/work_managers/mpi.py' 2024-04-02T19:11:19,662 adding 'westpa/work_managers/processes.py' 2024-04-02T19:11:19,663 adding 'westpa/work_managers/serial.py' 2024-04-02T19:11:19,665 adding 'westpa/work_managers/threads.py' 2024-04-02T19:11:19,667 adding 'westpa/work_managers/zeromq/__init__.py' 2024-04-02T19:11:19,670 adding 'westpa/work_managers/zeromq/core.py' 2024-04-02T19:11:19,672 adding 'westpa/work_managers/zeromq/node.py' 2024-04-02T19:11:19,675 adding 'westpa/work_managers/zeromq/work_manager.py' 2024-04-02T19:11:19,678 adding 'westpa/work_managers/zeromq/worker.py' 2024-04-02T19:11:19,680 adding 'westpa-2022.7.dist-info/AUTHORS' 2024-04-02T19:11:19,682 adding 'westpa-2022.7.dist-info/LICENSE' 2024-04-02T19:11:19,683 adding 'westpa-2022.7.dist-info/METADATA' 2024-04-02T19:11:19,685 adding 'westpa-2022.7.dist-info/WHEEL' 2024-04-02T19:11:19,686 adding 'westpa-2022.7.dist-info/entry_points.txt' 2024-04-02T19:11:19,687 adding 'westpa-2022.7.dist-info/top_level.txt' 2024-04-02T19:11:19,690 adding 'westpa-2022.7.dist-info/RECORD' 2024-04-02T19:11:19,765 removing build/bdist.linux-armv7l/wheel 2024-04-02T19:11:19,961 Building wheel for westpa (pyproject.toml): finished with status 'done' 2024-04-02T19:11:20,032 Created wheel for westpa: filename=westpa-2022.7-cp39-cp39-linux_armv7l.whl size=3514785 sha256=467e02864e8abf3a4f6f9766f81e8891112cb8520527e6a7dc0ef179214f4221 2024-04-02T19:11:20,033 Stored in directory: /tmp/pip-ephem-wheel-cache-4r0dxynv/wheels/66/50/7a/939c71bd49da76a50323b86abef9975a13070b64dee8ddf54b 2024-04-02T19:11:20,050 Successfully built westpa 2024-04-02T19:11:20,141 Removed build tracker: '/tmp/pip-build-tracker-t6sib9oi'