2024-04-11T12:24:02,748 Created temporary directory: /tmp/pip-build-tracker-r4ibzdu5 2024-04-11T12:24:02,749 Initialized build tracking at /tmp/pip-build-tracker-r4ibzdu5 2024-04-11T12:24:02,750 Created build tracker: /tmp/pip-build-tracker-r4ibzdu5 2024-04-11T12:24:02,750 Entered build tracker: /tmp/pip-build-tracker-r4ibzdu5 2024-04-11T12:24:02,751 Created temporary directory: /tmp/pip-wheel-f1zou7vz 2024-04-11T12:24:02,755 Created temporary directory: /tmp/pip-ephem-wheel-cache-c3rz0anq 2024-04-11T12:24:02,776 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-11T12:24:02,780 2 location(s) to search for versions of syntheseus: 2024-04-11T12:24:02,780 * https://pypi.org/simple/syntheseus/ 2024-04-11T12:24:02,780 * https://www.piwheels.org/simple/syntheseus/ 2024-04-11T12:24:02,780 Fetching project page and analyzing links: https://pypi.org/simple/syntheseus/ 2024-04-11T12:24:02,781 Getting page https://pypi.org/simple/syntheseus/ 2024-04-11T12:24:02,783 Found index url https://pypi.org/simple/ 2024-04-11T12:24:03,000 Fetched page https://pypi.org/simple/syntheseus/ as application/vnd.pypi.simple.v1+json 2024-04-11T12:24:03,001 Skipping link: No binaries permitted for syntheseus: https://files.pythonhosted.org/packages/72/25/d38f1b08e3113fcfc912158350c8d7b0150b98a3e1ab1ae2a4754e7c0d39/syntheseus-0.3.0-py3-none-any.whl (from https://pypi.org/simple/syntheseus/) (requires-python:>=3.7) 2024-04-11T12:24:03,002 Found link https://files.pythonhosted.org/packages/6f/05/55f01918e2c389864c5182d1452293afe24211549dab3bdca9525bdce9d2/syntheseus-0.3.0.tar.gz (from https://pypi.org/simple/syntheseus/) (requires-python:>=3.7), version: 0.3.0 2024-04-11T12:24:03,003 Skipping link: No binaries permitted for syntheseus: https://files.pythonhosted.org/packages/59/73/d46b461214805bbcef8956abf7e120f56cea7bd425a7c8c263c760c11cc8/syntheseus-0.4.0-py3-none-any.whl (from https://pypi.org/simple/syntheseus/) (requires-python:>=3.7) 2024-04-11T12:24:03,004 Found link https://files.pythonhosted.org/packages/da/a2/4a9d7050cd6fd16615e88a344da4c8e09996d14702f14d0ea62918413490/syntheseus-0.4.0.tar.gz (from https://pypi.org/simple/syntheseus/) (requires-python:>=3.7), version: 0.4.0 2024-04-11T12:24:03,005 Fetching project page and analyzing links: https://www.piwheels.org/simple/syntheseus/ 2024-04-11T12:24:03,005 Getting page https://www.piwheels.org/simple/syntheseus/ 2024-04-11T12:24:03,006 Found index url https://www.piwheels.org/simple/ 2024-04-11T12:24:03,489 Fetched page https://www.piwheels.org/simple/syntheseus/ as text/html 2024-04-11T12:24:03,491 Skipping link: No binaries permitted for syntheseus: https://www.piwheels.org/simple/syntheseus/syntheseus-0.3.0-py3-none-any.whl#sha256=c0c2da6149b6a4eb5d4d573ba649a047aefbaf78a1842a7ab2c7a2978d5e9541 (from https://www.piwheels.org/simple/syntheseus/) (requires-python:>=3.7) 2024-04-11T12:24:03,492 Skipping link: not a file: https://www.piwheels.org/simple/syntheseus/ 2024-04-11T12:24:03,493 Skipping link: not a file: https://pypi.org/simple/syntheseus/ 2024-04-11T12:24:03,511 Given no hashes to check 1 links for project 'syntheseus': discarding no candidates 2024-04-11T12:24:03,529 Collecting syntheseus==0.4.0 2024-04-11T12:24:03,532 Created temporary directory: /tmp/pip-unpack-om2sv0k5 2024-04-11T12:24:03,787 Downloading syntheseus-0.4.0.tar.gz (257 kB) 2024-04-11T12:24:04,173 Added syntheseus==0.4.0 from https://files.pythonhosted.org/packages/da/a2/4a9d7050cd6fd16615e88a344da4c8e09996d14702f14d0ea62918413490/syntheseus-0.4.0.tar.gz to build tracker '/tmp/pip-build-tracker-r4ibzdu5' 2024-04-11T12:24:04,180 Created temporary directory: /tmp/pip-build-env-vded94ls 2024-04-11T12:24:04,184 Installing build dependencies: started 2024-04-11T12:24:04,186 Running command pip subprocess to install build dependencies 2024-04-11T12:24:05,345 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-04-11T12:24:05,867 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-11T12:24:13,156 Collecting setuptools>=45 2024-04-11T12:24:13,308 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.2.0-py3-none-any.whl (821 kB) 2024-04-11T12:24:13,634 Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2) 2024-04-11T12:24:13,654 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2024-04-11T12:24:13,995 Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-04-11T12:24:14,016 Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB) 2024-04-11T12:24:14,360 Collecting typing-extensions (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-04-11T12:24:14,379 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.11.0-py3-none-any.whl (34 kB) 2024-04-11T12:24:16,949 Installing collected packages: typing-extensions, setuptools, packaging, setuptools_scm 2024-04-11T12:24:19,742 Successfully installed packaging-24.0 setuptools-69.2.0 setuptools_scm-8.0.4 typing-extensions-4.11.0 2024-04-11T12:24:20,245 Installing build dependencies: finished with status 'done' 2024-04-11T12:24:20,249 Getting requirements to build wheel: started 2024-04-11T12:24:20,250 Running command Getting requirements to build wheel 2024-04-11T12:24:21,140 running egg_info 2024-04-11T12:24:21,145 writing syntheseus.egg-info/PKG-INFO 2024-04-11T12:24:21,155 writing dependency_links to syntheseus.egg-info/dependency_links.txt 2024-04-11T12:24:21,157 writing entry points to syntheseus.egg-info/entry_points.txt 2024-04-11T12:24:21,161 writing requirements to syntheseus.egg-info/requires.txt 2024-04-11T12:24:21,163 writing top-level names to syntheseus.egg-info/top_level.txt 2024-04-11T12:24:21,217 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-11T12:24:21,220 reading manifest file 'syntheseus.egg-info/SOURCES.txt' 2024-04-11T12:24:21,233 adding license file 'LICENSE' 2024-04-11T12:24:21,240 writing manifest file 'syntheseus.egg-info/SOURCES.txt' 2024-04-11T12:24:21,358 Getting requirements to build wheel: finished with status 'done' 2024-04-11T12:24:21,369 Installing backend dependencies: started 2024-04-11T12:24:21,371 Running command pip subprocess to install backend dependencies 2024-04-11T12:24:22,528 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-04-11T12:24:23,033 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-11T12:24:23,754 Collecting wheel 2024-04-11T12:24:23,781 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-04-11T12:24:26,058 Installing collected packages: wheel 2024-04-11T12:24:26,281 Creating /tmp/pip-build-env-vded94ls/normal/local/bin 2024-04-11T12:24:26,283 changing mode of /tmp/pip-build-env-vded94ls/normal/local/bin/wheel to 755 2024-04-11T12:24:26,295 Successfully installed wheel-0.43.0 2024-04-11T12:24:26,755 Installing backend dependencies: finished with status 'done' 2024-04-11T12:24:26,757 Created temporary directory: /tmp/pip-modern-metadata-sb3xqfcs 2024-04-11T12:24:26,759 Preparing metadata (pyproject.toml): started 2024-04-11T12:24:26,760 Running command Preparing metadata (pyproject.toml) 2024-04-11T12:24:27,678 running dist_info 2024-04-11T12:24:27,684 creating /tmp/pip-modern-metadata-sb3xqfcs/syntheseus.egg-info 2024-04-11T12:24:27,690 writing /tmp/pip-modern-metadata-sb3xqfcs/syntheseus.egg-info/PKG-INFO 2024-04-11T12:24:27,699 writing dependency_links to /tmp/pip-modern-metadata-sb3xqfcs/syntheseus.egg-info/dependency_links.txt 2024-04-11T12:24:27,701 writing entry points to /tmp/pip-modern-metadata-sb3xqfcs/syntheseus.egg-info/entry_points.txt 2024-04-11T12:24:27,706 writing requirements to /tmp/pip-modern-metadata-sb3xqfcs/syntheseus.egg-info/requires.txt 2024-04-11T12:24:27,707 writing top-level names to /tmp/pip-modern-metadata-sb3xqfcs/syntheseus.egg-info/top_level.txt 2024-04-11T12:24:27,709 writing manifest file '/tmp/pip-modern-metadata-sb3xqfcs/syntheseus.egg-info/SOURCES.txt' 2024-04-11T12:24:27,765 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-11T12:24:27,769 reading manifest file '/tmp/pip-modern-metadata-sb3xqfcs/syntheseus.egg-info/SOURCES.txt' 2024-04-11T12:24:27,771 adding license file 'LICENSE' 2024-04-11T12:24:27,775 writing manifest file '/tmp/pip-modern-metadata-sb3xqfcs/syntheseus.egg-info/SOURCES.txt' 2024-04-11T12:24:27,776 creating '/tmp/pip-modern-metadata-sb3xqfcs/syntheseus-0.4.0.dist-info' 2024-04-11T12:24:27,941 Preparing metadata (pyproject.toml): finished with status 'done' 2024-04-11T12:24:27,946 Source in /tmp/pip-wheel-f1zou7vz/syntheseus_55c03fc4e7b14c5da496915d184366d6 has version 0.4.0, which satisfies requirement syntheseus==0.4.0 from https://files.pythonhosted.org/packages/da/a2/4a9d7050cd6fd16615e88a344da4c8e09996d14702f14d0ea62918413490/syntheseus-0.4.0.tar.gz 2024-04-11T12:24:27,947 Removed syntheseus==0.4.0 from https://files.pythonhosted.org/packages/da/a2/4a9d7050cd6fd16615e88a344da4c8e09996d14702f14d0ea62918413490/syntheseus-0.4.0.tar.gz from build tracker '/tmp/pip-build-tracker-r4ibzdu5' 2024-04-11T12:24:27,954 Created temporary directory: /tmp/pip-unpack-5bhatk63 2024-04-11T12:24:27,955 Created temporary directory: /tmp/pip-unpack-mldknur_ 2024-04-11T12:24:28,009 Building wheels for collected packages: syntheseus 2024-04-11T12:24:28,014 Created temporary directory: /tmp/pip-wheel-ru88wuyj 2024-04-11T12:24:28,014 Destination directory: /tmp/pip-wheel-ru88wuyj 2024-04-11T12:24:28,016 Building wheel for syntheseus (pyproject.toml): started 2024-04-11T12:24:28,018 Running command Building wheel for syntheseus (pyproject.toml) 2024-04-11T12:24:28,838 running bdist_wheel 2024-04-11T12:24:28,860 running build 2024-04-11T12:24:28,861 running build_py 2024-04-11T12:24:28,866 creating build 2024-04-11T12:24:28,867 creating build/lib 2024-04-11T12:24:28,868 creating build/lib/syntheseus 2024-04-11T12:24:28,869 copying syntheseus/__init__.py -> build/lib/syntheseus 2024-04-11T12:24:28,872 creating build/lib/syntheseus/search 2024-04-11T12:24:28,872 copying syntheseus/search/mol_inventory.py -> build/lib/syntheseus/search 2024-04-11T12:24:28,874 copying syntheseus/search/visualization.py -> build/lib/syntheseus/search 2024-04-11T12:24:28,877 copying syntheseus/search/__init__.py -> build/lib/syntheseus/search 2024-04-11T12:24:28,879 creating build/lib/syntheseus/reaction_prediction 2024-04-11T12:24:28,880 copying syntheseus/reaction_prediction/__init__.py -> build/lib/syntheseus/reaction_prediction 2024-04-11T12:24:28,882 creating build/lib/syntheseus/interface 2024-04-11T12:24:28,883 copying syntheseus/interface/reaction.py -> build/lib/syntheseus/interface 2024-04-11T12:24:28,884 copying syntheseus/interface/molecule.py -> build/lib/syntheseus/interface 2024-04-11T12:24:28,886 copying syntheseus/interface/bag.py -> build/lib/syntheseus/interface 2024-04-11T12:24:28,888 copying syntheseus/interface/typed_dict.py -> build/lib/syntheseus/interface 2024-04-11T12:24:28,890 copying syntheseus/interface/__init__.py -> build/lib/syntheseus/interface 2024-04-11T12:24:28,891 copying syntheseus/interface/models.py -> build/lib/syntheseus/interface 2024-04-11T12:24:28,894 creating build/lib/syntheseus/cli 2024-04-11T12:24:28,895 copying syntheseus/cli/eval_single_step.py -> build/lib/syntheseus/cli 2024-04-11T12:24:28,897 copying syntheseus/cli/search.py -> build/lib/syntheseus/cli 2024-04-11T12:24:28,900 copying syntheseus/cli/__init__.py -> build/lib/syntheseus/cli 2024-04-11T12:24:28,901 copying syntheseus/cli/main.py -> build/lib/syntheseus/cli 2024-04-11T12:24:28,904 creating build/lib/syntheseus/search/node_evaluation 2024-04-11T12:24:28,904 copying syntheseus/search/node_evaluation/base.py -> build/lib/syntheseus/search/node_evaluation 2024-04-11T12:24:28,907 copying syntheseus/search/node_evaluation/common.py -> build/lib/syntheseus/search/node_evaluation 2024-04-11T12:24:28,909 copying syntheseus/search/node_evaluation/__init__.py -> build/lib/syntheseus/search/node_evaluation 2024-04-11T12:24:28,911 creating build/lib/syntheseus/search/analysis 2024-04-11T12:24:28,911 copying syntheseus/search/analysis/diversity.py -> build/lib/syntheseus/search/analysis 2024-04-11T12:24:28,914 copying syntheseus/search/analysis/solution_time.py -> build/lib/syntheseus/search/analysis 2024-04-11T12:24:28,915 copying syntheseus/search/analysis/__init__.py -> build/lib/syntheseus/search/analysis 2024-04-11T12:24:28,917 copying syntheseus/search/analysis/route_extraction.py -> build/lib/syntheseus/search/analysis 2024-04-11T12:24:28,919 creating build/lib/syntheseus/search/utils 2024-04-11T12:24:28,920 copying syntheseus/search/utils/misc.py -> build/lib/syntheseus/search/utils 2024-04-11T12:24:28,922 copying syntheseus/search/utils/__init__.py -> build/lib/syntheseus/search/utils 2024-04-11T12:24:28,924 creating build/lib/syntheseus/search/graph 2024-04-11T12:24:28,925 copying syntheseus/search/graph/and_or.py -> build/lib/syntheseus/search/graph 2024-04-11T12:24:28,927 copying syntheseus/search/graph/base_graph.py -> build/lib/syntheseus/search/graph 2024-04-11T12:24:28,929 copying syntheseus/search/graph/standardization.py -> build/lib/syntheseus/search/graph 2024-04-11T12:24:28,931 copying syntheseus/search/graph/route.py -> build/lib/syntheseus/search/graph 2024-04-11T12:24:28,933 copying syntheseus/search/graph/__init__.py -> build/lib/syntheseus/search/graph 2024-04-11T12:24:28,934 copying syntheseus/search/graph/node.py -> build/lib/syntheseus/search/graph 2024-04-11T12:24:28,936 copying syntheseus/search/graph/molset.py -> build/lib/syntheseus/search/graph 2024-04-11T12:24:28,938 creating build/lib/syntheseus/search/algorithms 2024-04-11T12:24:28,939 copying syntheseus/search/algorithms/pdvn.py -> build/lib/syntheseus/search/algorithms 2024-04-11T12:24:28,942 copying syntheseus/search/algorithms/base.py -> build/lib/syntheseus/search/algorithms 2024-04-11T12:24:28,944 copying syntheseus/search/algorithms/breadth_first.py -> build/lib/syntheseus/search/algorithms 2024-04-11T12:24:28,946 copying syntheseus/search/algorithms/mixins.py -> build/lib/syntheseus/search/algorithms 2024-04-11T12:24:28,947 copying syntheseus/search/algorithms/__init__.py -> build/lib/syntheseus/search/algorithms 2024-04-11T12:24:28,949 copying syntheseus/search/algorithms/random.py -> build/lib/syntheseus/search/algorithms 2024-04-11T12:24:28,951 creating build/lib/syntheseus/search/graph/message_passing 2024-04-11T12:24:28,952 copying syntheseus/search/graph/message_passing/run.py -> build/lib/syntheseus/search/graph/message_passing 2024-04-11T12:24:28,954 copying syntheseus/search/graph/message_passing/__init__.py -> build/lib/syntheseus/search/graph/message_passing 2024-04-11T12:24:28,955 copying syntheseus/search/graph/message_passing/update_functions.py -> build/lib/syntheseus/search/graph/message_passing 2024-04-11T12:24:28,958 creating build/lib/syntheseus/search/algorithms/best_first 2024-04-11T12:24:28,959 copying syntheseus/search/algorithms/best_first/base.py -> build/lib/syntheseus/search/algorithms/best_first 2024-04-11T12:24:28,961 copying syntheseus/search/algorithms/best_first/__init__.py -> build/lib/syntheseus/search/algorithms/best_first 2024-04-11T12:24:28,963 copying syntheseus/search/algorithms/best_first/retro_star.py -> build/lib/syntheseus/search/algorithms/best_first 2024-04-11T12:24:28,965 creating build/lib/syntheseus/search/algorithms/mcts 2024-04-11T12:24:28,966 copying syntheseus/search/algorithms/mcts/base.py -> build/lib/syntheseus/search/algorithms/mcts 2024-04-11T12:24:28,969 copying syntheseus/search/algorithms/mcts/__init__.py -> build/lib/syntheseus/search/algorithms/mcts 2024-04-11T12:24:28,970 copying syntheseus/search/algorithms/mcts/molset.py -> build/lib/syntheseus/search/algorithms/mcts 2024-04-11T12:24:28,973 creating build/lib/syntheseus/reaction_prediction/data 2024-04-11T12:24:28,974 copying syntheseus/reaction_prediction/data/dataset.py -> build/lib/syntheseus/reaction_prediction/data 2024-04-11T12:24:28,976 copying syntheseus/reaction_prediction/data/__init__.py -> build/lib/syntheseus/reaction_prediction/data 2024-04-11T12:24:28,978 copying syntheseus/reaction_prediction/data/reaction_sample.py -> build/lib/syntheseus/reaction_prediction/data 2024-04-11T12:24:28,980 creating build/lib/syntheseus/reaction_prediction/chem 2024-04-11T12:24:28,981 copying syntheseus/reaction_prediction/chem/utils.py -> build/lib/syntheseus/reaction_prediction/chem 2024-04-11T12:24:28,982 copying syntheseus/reaction_prediction/chem/__init__.py -> build/lib/syntheseus/reaction_prediction/chem 2024-04-11T12:24:28,984 creating build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:28,985 copying syntheseus/reaction_prediction/utils/parallel.py -> build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:28,987 copying syntheseus/reaction_prediction/utils/testing.py -> build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:28,988 copying syntheseus/reaction_prediction/utils/metrics.py -> build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:28,990 copying syntheseus/reaction_prediction/utils/misc.py -> build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:28,992 copying syntheseus/reaction_prediction/utils/downloading.py -> build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:28,994 copying syntheseus/reaction_prediction/utils/inference.py -> build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:28,995 copying syntheseus/reaction_prediction/utils/config.py -> build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:28,997 copying syntheseus/reaction_prediction/utils/__init__.py -> build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:28,998 copying syntheseus/reaction_prediction/utils/model_loading.py -> build/lib/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,000 creating build/lib/syntheseus/reaction_prediction/models 2024-04-11T12:24:29,001 copying syntheseus/reaction_prediction/models/retro_knn.py -> build/lib/syntheseus/reaction_prediction/models 2024-04-11T12:24:29,003 copying syntheseus/reaction_prediction/models/__init__.py -> build/lib/syntheseus/reaction_prediction/models 2024-04-11T12:24:29,005 creating build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,006 copying syntheseus/reaction_prediction/inference/retro_knn.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,008 copying syntheseus/reaction_prediction/inference/local_retro.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,010 copying syntheseus/reaction_prediction/inference/graph2edits.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,012 copying syntheseus/reaction_prediction/inference/toy_models.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,014 copying syntheseus/reaction_prediction/inference/root_aligned.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,016 copying syntheseus/reaction_prediction/inference/base.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,018 copying syntheseus/reaction_prediction/inference/gln.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,020 copying syntheseus/reaction_prediction/inference/mhnreact.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,022 copying syntheseus/reaction_prediction/inference/chemformer.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,024 copying syntheseus/reaction_prediction/inference/config.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,026 copying syntheseus/reaction_prediction/inference/__init__.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,027 copying syntheseus/reaction_prediction/inference/megan.py -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,030 creating build/lib/syntheseus/reaction_prediction/cli 2024-04-11T12:24:29,031 copying syntheseus/reaction_prediction/cli/__init__.py -> build/lib/syntheseus/reaction_prediction/cli 2024-04-11T12:24:29,032 running egg_info 2024-04-11T12:24:29,037 writing syntheseus.egg-info/PKG-INFO 2024-04-11T12:24:29,046 writing dependency_links to syntheseus.egg-info/dependency_links.txt 2024-04-11T12:24:29,047 writing entry points to syntheseus.egg-info/entry_points.txt 2024-04-11T12:24:29,052 writing requirements to syntheseus.egg-info/requires.txt 2024-04-11T12:24:29,053 writing top-level names to syntheseus.egg-info/top_level.txt 2024-04-11T12:24:29,092 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-11T12:24:29,095 reading manifest file 'syntheseus.egg-info/SOURCES.txt' 2024-04-11T12:24:29,108 adding license file 'LICENSE' 2024-04-11T12:24:29,115 writing manifest file 'syntheseus.egg-info/SOURCES.txt' 2024-04-11T12:24:29,118 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.reaction_prediction.environment_gln' is absent from the `packages` configuration. 2024-04-11T12:24:29,118 !! 2024-04-11T12:24:29,119 ******************************************************************************** 2024-04-11T12:24:29,120 ############################ 2024-04-11T12:24:29,120 # Package would be ignored # 2024-04-11T12:24:29,121 ############################ 2024-04-11T12:24:29,121 Python recognizes 'syntheseus.reaction_prediction.environment_gln' as an importable package[^1], 2024-04-11T12:24:29,122 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,123 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,123 package, please make sure that 'syntheseus.reaction_prediction.environment_gln' is explicitly added 2024-04-11T12:24:29,124 to the `packages` configuration field. 2024-04-11T12:24:29,126 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,126 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,127 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,128 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,130 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,131 If you don't want 'syntheseus.reaction_prediction.environment_gln' to be distributed and are 2024-04-11T12:24:29,131 already explicitly excluding 'syntheseus.reaction_prediction.environment_gln' via 2024-04-11T12:24:29,132 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,132 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,133 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,134 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,135 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,137 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,137 even if it does not contain any `.py` files. 2024-04-11T12:24:29,138 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,138 directory, all directories are treated like packages. 2024-04-11T12:24:29,139 ******************************************************************************** 2024-04-11T12:24:29,140 !! 2024-04-11T12:24:29,140 check.warn(importable) 2024-04-11T12:24:29,141 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests' is absent from the `packages` configuration. 2024-04-11T12:24:29,142 !! 2024-04-11T12:24:29,143 ******************************************************************************** 2024-04-11T12:24:29,143 ############################ 2024-04-11T12:24:29,144 # Package would be ignored # 2024-04-11T12:24:29,144 ############################ 2024-04-11T12:24:29,145 Python recognizes 'syntheseus.tests' as an importable package[^1], 2024-04-11T12:24:29,145 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,146 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,146 package, please make sure that 'syntheseus.tests' is explicitly added 2024-04-11T12:24:29,147 to the `packages` configuration field. 2024-04-11T12:24:29,148 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,148 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,149 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,150 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,151 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,152 If you don't want 'syntheseus.tests' to be distributed and are 2024-04-11T12:24:29,152 already explicitly excluding 'syntheseus.tests' via 2024-04-11T12:24:29,153 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,153 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,154 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,155 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,156 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,158 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,158 even if it does not contain any `.py` files. 2024-04-11T12:24:29,158 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,159 directory, all directories are treated like packages. 2024-04-11T12:24:29,159 ******************************************************************************** 2024-04-11T12:24:29,160 !! 2024-04-11T12:24:29,161 check.warn(importable) 2024-04-11T12:24:29,161 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.cli' is absent from the `packages` configuration. 2024-04-11T12:24:29,162 !! 2024-04-11T12:24:29,163 ******************************************************************************** 2024-04-11T12:24:29,163 ############################ 2024-04-11T12:24:29,164 # Package would be ignored # 2024-04-11T12:24:29,164 ############################ 2024-04-11T12:24:29,165 Python recognizes 'syntheseus.tests.cli' as an importable package[^1], 2024-04-11T12:24:29,165 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,166 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,167 package, please make sure that 'syntheseus.tests.cli' is explicitly added 2024-04-11T12:24:29,167 to the `packages` configuration field. 2024-04-11T12:24:29,168 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,169 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,169 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,170 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,171 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,172 If you don't want 'syntheseus.tests.cli' to be distributed and are 2024-04-11T12:24:29,173 already explicitly excluding 'syntheseus.tests.cli' via 2024-04-11T12:24:29,173 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,173 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,174 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,175 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,175 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,177 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,177 even if it does not contain any `.py` files. 2024-04-11T12:24:29,178 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,178 directory, all directories are treated like packages. 2024-04-11T12:24:29,178 ******************************************************************************** 2024-04-11T12:24:29,179 !! 2024-04-11T12:24:29,180 check.warn(importable) 2024-04-11T12:24:29,180 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.interface' is absent from the `packages` configuration. 2024-04-11T12:24:29,181 !! 2024-04-11T12:24:29,181 ******************************************************************************** 2024-04-11T12:24:29,182 ############################ 2024-04-11T12:24:29,182 # Package would be ignored # 2024-04-11T12:24:29,183 ############################ 2024-04-11T12:24:29,183 Python recognizes 'syntheseus.tests.interface' as an importable package[^1], 2024-04-11T12:24:29,184 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,185 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,185 package, please make sure that 'syntheseus.tests.interface' is explicitly added 2024-04-11T12:24:29,186 to the `packages` configuration field. 2024-04-11T12:24:29,187 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,187 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,188 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,189 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,190 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,191 If you don't want 'syntheseus.tests.interface' to be distributed and are 2024-04-11T12:24:29,191 already explicitly excluding 'syntheseus.tests.interface' via 2024-04-11T12:24:29,192 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,192 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,192 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,194 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,195 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,196 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,197 even if it does not contain any `.py` files. 2024-04-11T12:24:29,197 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,198 directory, all directories are treated like packages. 2024-04-11T12:24:29,198 ******************************************************************************** 2024-04-11T12:24:29,199 !! 2024-04-11T12:24:29,199 check.warn(importable) 2024-04-11T12:24:29,200 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction' is absent from the `packages` configuration. 2024-04-11T12:24:29,200 !! 2024-04-11T12:24:29,201 ******************************************************************************** 2024-04-11T12:24:29,202 ############################ 2024-04-11T12:24:29,202 # Package would be ignored # 2024-04-11T12:24:29,202 ############################ 2024-04-11T12:24:29,203 Python recognizes 'syntheseus.tests.reaction_prediction' as an importable package[^1], 2024-04-11T12:24:29,203 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,204 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,205 package, please make sure that 'syntheseus.tests.reaction_prediction' is explicitly added 2024-04-11T12:24:29,205 to the `packages` configuration field. 2024-04-11T12:24:29,206 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,206 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,207 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,208 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,209 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,210 If you don't want 'syntheseus.tests.reaction_prediction' to be distributed and are 2024-04-11T12:24:29,210 already explicitly excluding 'syntheseus.tests.reaction_prediction' via 2024-04-11T12:24:29,211 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,212 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,212 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,213 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,214 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,215 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,216 even if it does not contain any `.py` files. 2024-04-11T12:24:29,216 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,217 directory, all directories are treated like packages. 2024-04-11T12:24:29,218 ******************************************************************************** 2024-04-11T12:24:29,219 !! 2024-04-11T12:24:29,219 check.warn(importable) 2024-04-11T12:24:29,220 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction.chem' is absent from the `packages` configuration. 2024-04-11T12:24:29,220 !! 2024-04-11T12:24:29,222 ******************************************************************************** 2024-04-11T12:24:29,222 ############################ 2024-04-11T12:24:29,223 # Package would be ignored # 2024-04-11T12:24:29,223 ############################ 2024-04-11T12:24:29,224 Python recognizes 'syntheseus.tests.reaction_prediction.chem' as an importable package[^1], 2024-04-11T12:24:29,225 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,226 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,226 package, please make sure that 'syntheseus.tests.reaction_prediction.chem' is explicitly added 2024-04-11T12:24:29,227 to the `packages` configuration field. 2024-04-11T12:24:29,228 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,229 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,230 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,230 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,231 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,232 If you don't want 'syntheseus.tests.reaction_prediction.chem' to be distributed and are 2024-04-11T12:24:29,233 already explicitly excluding 'syntheseus.tests.reaction_prediction.chem' via 2024-04-11T12:24:29,233 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,233 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,234 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,235 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,236 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,237 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,237 even if it does not contain any `.py` files. 2024-04-11T12:24:29,238 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,238 directory, all directories are treated like packages. 2024-04-11T12:24:29,239 ******************************************************************************** 2024-04-11T12:24:29,240 !! 2024-04-11T12:24:29,240 check.warn(importable) 2024-04-11T12:24:29,241 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction.data' is absent from the `packages` configuration. 2024-04-11T12:24:29,241 !! 2024-04-11T12:24:29,242 ******************************************************************************** 2024-04-11T12:24:29,243 ############################ 2024-04-11T12:24:29,243 # Package would be ignored # 2024-04-11T12:24:29,244 ############################ 2024-04-11T12:24:29,244 Python recognizes 'syntheseus.tests.reaction_prediction.data' as an importable package[^1], 2024-04-11T12:24:29,245 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,246 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,246 package, please make sure that 'syntheseus.tests.reaction_prediction.data' is explicitly added 2024-04-11T12:24:29,247 to the `packages` configuration field. 2024-04-11T12:24:29,248 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,248 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,249 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,250 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,251 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,252 If you don't want 'syntheseus.tests.reaction_prediction.data' to be distributed and are 2024-04-11T12:24:29,253 already explicitly excluding 'syntheseus.tests.reaction_prediction.data' via 2024-04-11T12:24:29,253 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,254 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,255 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,255 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,256 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,258 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,258 even if it does not contain any `.py` files. 2024-04-11T12:24:29,258 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,259 directory, all directories are treated like packages. 2024-04-11T12:24:29,259 ******************************************************************************** 2024-04-11T12:24:29,260 !! 2024-04-11T12:24:29,260 check.warn(importable) 2024-04-11T12:24:29,261 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction.inference' is absent from the `packages` configuration. 2024-04-11T12:24:29,261 !! 2024-04-11T12:24:29,262 ******************************************************************************** 2024-04-11T12:24:29,263 ############################ 2024-04-11T12:24:29,263 # Package would be ignored # 2024-04-11T12:24:29,264 ############################ 2024-04-11T12:24:29,264 Python recognizes 'syntheseus.tests.reaction_prediction.inference' as an importable package[^1], 2024-04-11T12:24:29,265 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,266 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,267 package, please make sure that 'syntheseus.tests.reaction_prediction.inference' is explicitly added 2024-04-11T12:24:29,267 to the `packages` configuration field. 2024-04-11T12:24:29,268 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,269 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,269 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,270 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,271 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,272 If you don't want 'syntheseus.tests.reaction_prediction.inference' to be distributed and are 2024-04-11T12:24:29,272 already explicitly excluding 'syntheseus.tests.reaction_prediction.inference' via 2024-04-11T12:24:29,273 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,273 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,274 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,275 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,276 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,278 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,278 even if it does not contain any `.py` files. 2024-04-11T12:24:29,279 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,279 directory, all directories are treated like packages. 2024-04-11T12:24:29,280 ******************************************************************************** 2024-04-11T12:24:29,281 !! 2024-04-11T12:24:29,281 check.warn(importable) 2024-04-11T12:24:29,282 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.reaction_prediction.utils' is absent from the `packages` configuration. 2024-04-11T12:24:29,282 !! 2024-04-11T12:24:29,283 ******************************************************************************** 2024-04-11T12:24:29,284 ############################ 2024-04-11T12:24:29,284 # Package would be ignored # 2024-04-11T12:24:29,285 ############################ 2024-04-11T12:24:29,285 Python recognizes 'syntheseus.tests.reaction_prediction.utils' as an importable package[^1], 2024-04-11T12:24:29,286 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,286 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,287 package, please make sure that 'syntheseus.tests.reaction_prediction.utils' is explicitly added 2024-04-11T12:24:29,287 to the `packages` configuration field. 2024-04-11T12:24:29,288 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,289 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,289 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,290 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,291 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,292 If you don't want 'syntheseus.tests.reaction_prediction.utils' to be distributed and are 2024-04-11T12:24:29,292 already explicitly excluding 'syntheseus.tests.reaction_prediction.utils' via 2024-04-11T12:24:29,293 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,294 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,294 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,295 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,296 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,298 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,298 even if it does not contain any `.py` files. 2024-04-11T12:24:29,299 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,299 directory, all directories are treated like packages. 2024-04-11T12:24:29,300 ******************************************************************************** 2024-04-11T12:24:29,301 !! 2024-04-11T12:24:29,302 check.warn(importable) 2024-04-11T12:24:29,302 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search' is absent from the `packages` configuration. 2024-04-11T12:24:29,303 !! 2024-04-11T12:24:29,304 ******************************************************************************** 2024-04-11T12:24:29,304 ############################ 2024-04-11T12:24:29,305 # Package would be ignored # 2024-04-11T12:24:29,306 ############################ 2024-04-11T12:24:29,306 Python recognizes 'syntheseus.tests.search' as an importable package[^1], 2024-04-11T12:24:29,307 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,308 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,309 package, please make sure that 'syntheseus.tests.search' is explicitly added 2024-04-11T12:24:29,309 to the `packages` configuration field. 2024-04-11T12:24:29,310 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,311 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,312 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,312 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,314 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,314 If you don't want 'syntheseus.tests.search' to be distributed and are 2024-04-11T12:24:29,315 already explicitly excluding 'syntheseus.tests.search' via 2024-04-11T12:24:29,315 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,315 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,316 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,317 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,318 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,319 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,319 even if it does not contain any `.py` files. 2024-04-11T12:24:29,320 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,320 directory, all directories are treated like packages. 2024-04-11T12:24:29,321 ******************************************************************************** 2024-04-11T12:24:29,321 !! 2024-04-11T12:24:29,322 check.warn(importable) 2024-04-11T12:24:29,322 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search.algorithms' is absent from the `packages` configuration. 2024-04-11T12:24:29,323 !! 2024-04-11T12:24:29,324 ******************************************************************************** 2024-04-11T12:24:29,325 ############################ 2024-04-11T12:24:29,325 # Package would be ignored # 2024-04-11T12:24:29,326 ############################ 2024-04-11T12:24:29,326 Python recognizes 'syntheseus.tests.search.algorithms' as an importable package[^1], 2024-04-11T12:24:29,327 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,328 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,329 package, please make sure that 'syntheseus.tests.search.algorithms' is explicitly added 2024-04-11T12:24:29,329 to the `packages` configuration field. 2024-04-11T12:24:29,331 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,331 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,332 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,333 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,334 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,335 If you don't want 'syntheseus.tests.search.algorithms' to be distributed and are 2024-04-11T12:24:29,335 already explicitly excluding 'syntheseus.tests.search.algorithms' via 2024-04-11T12:24:29,336 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,336 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,337 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,338 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,339 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,341 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,342 even if it does not contain any `.py` files. 2024-04-11T12:24:29,342 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,343 directory, all directories are treated like packages. 2024-04-11T12:24:29,343 ******************************************************************************** 2024-04-11T12:24:29,344 !! 2024-04-11T12:24:29,345 check.warn(importable) 2024-04-11T12:24:29,345 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search.analysis' is absent from the `packages` configuration. 2024-04-11T12:24:29,346 !! 2024-04-11T12:24:29,347 ******************************************************************************** 2024-04-11T12:24:29,347 ############################ 2024-04-11T12:24:29,348 # Package would be ignored # 2024-04-11T12:24:29,348 ############################ 2024-04-11T12:24:29,349 Python recognizes 'syntheseus.tests.search.analysis' as an importable package[^1], 2024-04-11T12:24:29,350 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,351 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,351 package, please make sure that 'syntheseus.tests.search.analysis' is explicitly added 2024-04-11T12:24:29,352 to the `packages` configuration field. 2024-04-11T12:24:29,353 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,354 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,354 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,355 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,356 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,357 If you don't want 'syntheseus.tests.search.analysis' to be distributed and are 2024-04-11T12:24:29,358 already explicitly excluding 'syntheseus.tests.search.analysis' via 2024-04-11T12:24:29,358 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,358 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,359 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,360 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,361 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,363 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,363 even if it does not contain any `.py` files. 2024-04-11T12:24:29,364 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,364 directory, all directories are treated like packages. 2024-04-11T12:24:29,365 ******************************************************************************** 2024-04-11T12:24:29,366 !! 2024-04-11T12:24:29,367 check.warn(importable) 2024-04-11T12:24:29,367 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search.graph' is absent from the `packages` configuration. 2024-04-11T12:24:29,368 !! 2024-04-11T12:24:29,369 ******************************************************************************** 2024-04-11T12:24:29,370 ############################ 2024-04-11T12:24:29,370 # Package would be ignored # 2024-04-11T12:24:29,371 ############################ 2024-04-11T12:24:29,371 Python recognizes 'syntheseus.tests.search.graph' as an importable package[^1], 2024-04-11T12:24:29,372 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,373 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,374 package, please make sure that 'syntheseus.tests.search.graph' is explicitly added 2024-04-11T12:24:29,374 to the `packages` configuration field. 2024-04-11T12:24:29,375 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,376 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,376 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,377 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,378 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,379 If you don't want 'syntheseus.tests.search.graph' to be distributed and are 2024-04-11T12:24:29,380 already explicitly excluding 'syntheseus.tests.search.graph' via 2024-04-11T12:24:29,380 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,381 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,381 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,382 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,383 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,384 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,385 even if it does not contain any `.py` files. 2024-04-11T12:24:29,385 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,386 directory, all directories are treated like packages. 2024-04-11T12:24:29,386 ******************************************************************************** 2024-04-11T12:24:29,387 !! 2024-04-11T12:24:29,388 check.warn(importable) 2024-04-11T12:24:29,388 /tmp/pip-build-env-vded94ls/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'syntheseus.tests.search.node_evaluation' is absent from the `packages` configuration. 2024-04-11T12:24:29,388 !! 2024-04-11T12:24:29,389 ******************************************************************************** 2024-04-11T12:24:29,390 ############################ 2024-04-11T12:24:29,390 # Package would be ignored # 2024-04-11T12:24:29,391 ############################ 2024-04-11T12:24:29,391 Python recognizes 'syntheseus.tests.search.node_evaluation' as an importable package[^1], 2024-04-11T12:24:29,392 but it is absent from setuptools' `packages` configuration. 2024-04-11T12:24:29,393 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-11T12:24:29,394 package, please make sure that 'syntheseus.tests.search.node_evaluation' is explicitly added 2024-04-11T12:24:29,394 to the `packages` configuration field. 2024-04-11T12:24:29,395 Alternatively, you can also rely on setuptools' discovery methods 2024-04-11T12:24:29,396 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-11T12:24:29,396 instead of `find_packages(...)`/`find:`). 2024-04-11T12:24:29,397 You can read more about "package discovery" on setuptools documentation page: 2024-04-11T12:24:29,398 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-11T12:24:29,399 If you don't want 'syntheseus.tests.search.node_evaluation' to be distributed and are 2024-04-11T12:24:29,400 already explicitly excluding 'syntheseus.tests.search.node_evaluation' via 2024-04-11T12:24:29,400 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-11T12:24:29,401 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-11T12:24:29,401 combination with a more fine grained `package-data` configuration. 2024-04-11T12:24:29,402 You can read more about "package data files" on setuptools documentation page: 2024-04-11T12:24:29,403 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-11T12:24:29,404 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-11T12:24:29,404 even if it does not contain any `.py` files. 2024-04-11T12:24:29,405 On the other hand, currently there is no concept of package data 2024-04-11T12:24:29,405 directory, all directories are treated like packages. 2024-04-11T12:24:29,406 ******************************************************************************** 2024-04-11T12:24:29,406 !! 2024-04-11T12:24:29,407 check.warn(importable) 2024-04-11T12:24:29,407 copying syntheseus/py.typed -> build/lib/syntheseus 2024-04-11T12:24:29,408 creating build/lib/syntheseus/tests 2024-04-11T12:24:29,408 copying syntheseus/tests/__init__.py -> build/lib/syntheseus/tests 2024-04-11T12:24:29,408 copying syntheseus/tests/conftest.py -> build/lib/syntheseus/tests 2024-04-11T12:24:29,409 creating build/lib/syntheseus/tests/cli 2024-04-11T12:24:29,409 copying syntheseus/tests/cli/__init__.py -> build/lib/syntheseus/tests/cli 2024-04-11T12:24:29,410 copying syntheseus/tests/cli/test_cli.py -> build/lib/syntheseus/tests/cli 2024-04-11T12:24:29,410 copying syntheseus/tests/cli/test_eval_single_step.py -> build/lib/syntheseus/tests/cli 2024-04-11T12:24:29,411 creating build/lib/syntheseus/tests/interface 2024-04-11T12:24:29,411 copying syntheseus/tests/interface/__init__.py -> build/lib/syntheseus/tests/interface 2024-04-11T12:24:29,412 copying syntheseus/tests/interface/test_bag.py -> build/lib/syntheseus/tests/interface 2024-04-11T12:24:29,412 copying syntheseus/tests/interface/test_models.py -> build/lib/syntheseus/tests/interface 2024-04-11T12:24:29,412 copying syntheseus/tests/interface/test_molecule.py -> build/lib/syntheseus/tests/interface 2024-04-11T12:24:29,413 copying syntheseus/tests/interface/test_reaction.py -> build/lib/syntheseus/tests/interface 2024-04-11T12:24:29,414 copying syntheseus/tests/interface/test_toy_models.py -> build/lib/syntheseus/tests/interface 2024-04-11T12:24:29,414 creating build/lib/syntheseus/tests/reaction_prediction 2024-04-11T12:24:29,415 copying syntheseus/tests/reaction_prediction/__init__.py -> build/lib/syntheseus/tests/reaction_prediction 2024-04-11T12:24:29,415 creating build/lib/syntheseus/tests/reaction_prediction/chem 2024-04-11T12:24:29,416 copying syntheseus/tests/reaction_prediction/chem/__init__.py -> build/lib/syntheseus/tests/reaction_prediction/chem 2024-04-11T12:24:29,416 copying syntheseus/tests/reaction_prediction/chem/test_utils.py -> build/lib/syntheseus/tests/reaction_prediction/chem 2024-04-11T12:24:29,416 creating build/lib/syntheseus/tests/reaction_prediction/data 2024-04-11T12:24:29,417 copying syntheseus/tests/reaction_prediction/data/__init__.py -> build/lib/syntheseus/tests/reaction_prediction/data 2024-04-11T12:24:29,418 copying syntheseus/tests/reaction_prediction/data/test_dataset.py -> build/lib/syntheseus/tests/reaction_prediction/data 2024-04-11T12:24:29,418 creating build/lib/syntheseus/tests/reaction_prediction/inference 2024-04-11T12:24:29,419 copying syntheseus/tests/reaction_prediction/inference/__init__.py -> build/lib/syntheseus/tests/reaction_prediction/inference 2024-04-11T12:24:29,419 copying syntheseus/tests/reaction_prediction/inference/test_models.py -> build/lib/syntheseus/tests/reaction_prediction/inference 2024-04-11T12:24:29,420 creating build/lib/syntheseus/tests/reaction_prediction/utils 2024-04-11T12:24:29,420 copying syntheseus/tests/reaction_prediction/utils/__init__.py -> build/lib/syntheseus/tests/reaction_prediction/utils 2024-04-11T12:24:29,421 copying syntheseus/tests/reaction_prediction/utils/test_misc.py -> build/lib/syntheseus/tests/reaction_prediction/utils 2024-04-11T12:24:29,421 creating build/lib/syntheseus/tests/search 2024-04-11T12:24:29,422 copying syntheseus/tests/search/__init__.py -> build/lib/syntheseus/tests/search 2024-04-11T12:24:29,422 copying syntheseus/tests/search/conftest.py -> build/lib/syntheseus/tests/search 2024-04-11T12:24:29,423 copying syntheseus/tests/search/test_mol_inventory.py -> build/lib/syntheseus/tests/search 2024-04-11T12:24:29,423 copying syntheseus/tests/search/test_visualization.py -> build/lib/syntheseus/tests/search 2024-04-11T12:24:29,423 creating build/lib/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,424 copying syntheseus/tests/search/algorithms/__init__.py -> build/lib/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,424 copying syntheseus/tests/search/algorithms/test_base.py -> build/lib/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,425 copying syntheseus/tests/search/algorithms/test_best_first.py -> build/lib/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,425 copying syntheseus/tests/search/algorithms/test_breadth_first.py -> build/lib/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,426 copying syntheseus/tests/search/algorithms/test_mcts.py -> build/lib/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,426 copying syntheseus/tests/search/algorithms/test_pdvn.py -> build/lib/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,427 copying syntheseus/tests/search/algorithms/test_random.py -> build/lib/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,427 creating build/lib/syntheseus/tests/search/analysis 2024-04-11T12:24:29,428 copying syntheseus/tests/search/analysis/__init__.py -> build/lib/syntheseus/tests/search/analysis 2024-04-11T12:24:29,428 copying syntheseus/tests/search/analysis/conftest.py -> build/lib/syntheseus/tests/search/analysis 2024-04-11T12:24:29,429 copying syntheseus/tests/search/analysis/test_diversity.py -> build/lib/syntheseus/tests/search/analysis 2024-04-11T12:24:29,429 copying syntheseus/tests/search/analysis/test_route_extraction.py -> build/lib/syntheseus/tests/search/analysis 2024-04-11T12:24:29,430 copying syntheseus/tests/search/analysis/test_solution_time.py -> build/lib/syntheseus/tests/search/analysis 2024-04-11T12:24:29,430 creating build/lib/syntheseus/tests/search/graph 2024-04-11T12:24:29,431 copying syntheseus/tests/search/graph/__init__.py -> build/lib/syntheseus/tests/search/graph 2024-04-11T12:24:29,431 copying syntheseus/tests/search/graph/test_andor.py -> build/lib/syntheseus/tests/search/graph 2024-04-11T12:24:29,432 copying syntheseus/tests/search/graph/test_base.py -> build/lib/syntheseus/tests/search/graph 2024-04-11T12:24:29,432 copying syntheseus/tests/search/graph/test_message_passing.py -> build/lib/syntheseus/tests/search/graph 2024-04-11T12:24:29,433 copying syntheseus/tests/search/graph/test_molset.py -> build/lib/syntheseus/tests/search/graph 2024-04-11T12:24:29,433 copying syntheseus/tests/search/graph/test_route.py -> build/lib/syntheseus/tests/search/graph 2024-04-11T12:24:29,434 copying syntheseus/tests/search/graph/test_standardization.py -> build/lib/syntheseus/tests/search/graph 2024-04-11T12:24:29,434 creating build/lib/syntheseus/tests/search/node_evaluation 2024-04-11T12:24:29,435 copying syntheseus/tests/search/node_evaluation/__init__.py -> build/lib/syntheseus/tests/search/node_evaluation 2024-04-11T12:24:29,435 copying syntheseus/tests/search/node_evaluation/test_common.py -> build/lib/syntheseus/tests/search/node_evaluation 2024-04-11T12:24:29,436 creating build/lib/syntheseus/reaction_prediction/environment_gln 2024-04-11T12:24:29,436 copying syntheseus/reaction_prediction/environment_gln/Dockerfile -> build/lib/syntheseus/reaction_prediction/environment_gln 2024-04-11T12:24:29,437 copying syntheseus/reaction_prediction/environment_gln/environment.yml -> build/lib/syntheseus/reaction_prediction/environment_gln 2024-04-11T12:24:29,438 copying syntheseus/cli/search_config.yml -> build/lib/syntheseus/cli 2024-04-11T12:24:29,438 copying syntheseus/reaction_prediction/inference/default_checkpoint_links.yml -> build/lib/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,439 installing to build/bdist.linux-armv7l/wheel 2024-04-11T12:24:29,439 running install 2024-04-11T12:24:29,439 running install_lib 2024-04-11T12:24:29,440 creating build/bdist.linux-armv7l 2024-04-11T12:24:29,440 creating build/bdist.linux-armv7l/wheel 2024-04-11T12:24:29,441 creating build/bdist.linux-armv7l/wheel/syntheseus 2024-04-11T12:24:29,441 copying build/lib/syntheseus/py.typed -> build/bdist.linux-armv7l/wheel/syntheseus 2024-04-11T12:24:29,442 creating build/bdist.linux-armv7l/wheel/syntheseus/search 2024-04-11T12:24:29,443 creating build/bdist.linux-armv7l/wheel/syntheseus/search/node_evaluation 2024-04-11T12:24:29,443 copying build/lib/syntheseus/search/node_evaluation/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/node_evaluation 2024-04-11T12:24:29,444 copying build/lib/syntheseus/search/node_evaluation/common.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/node_evaluation 2024-04-11T12:24:29,444 copying build/lib/syntheseus/search/node_evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/node_evaluation 2024-04-11T12:24:29,445 creating build/bdist.linux-armv7l/wheel/syntheseus/search/analysis 2024-04-11T12:24:29,445 copying build/lib/syntheseus/search/analysis/diversity.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/analysis 2024-04-11T12:24:29,446 copying build/lib/syntheseus/search/analysis/solution_time.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/analysis 2024-04-11T12:24:29,446 copying build/lib/syntheseus/search/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/analysis 2024-04-11T12:24:29,447 copying build/lib/syntheseus/search/analysis/route_extraction.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/analysis 2024-04-11T12:24:29,447 creating build/bdist.linux-armv7l/wheel/syntheseus/search/utils 2024-04-11T12:24:29,448 copying build/lib/syntheseus/search/utils/misc.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/utils 2024-04-11T12:24:29,449 copying build/lib/syntheseus/search/utils/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/utils 2024-04-11T12:24:29,450 creating build/bdist.linux-armv7l/wheel/syntheseus/search/graph 2024-04-11T12:24:29,450 copying build/lib/syntheseus/search/graph/and_or.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph 2024-04-11T12:24:29,451 copying build/lib/syntheseus/search/graph/base_graph.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph 2024-04-11T12:24:29,451 copying build/lib/syntheseus/search/graph/standardization.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph 2024-04-11T12:24:29,452 creating build/bdist.linux-armv7l/wheel/syntheseus/search/graph/message_passing 2024-04-11T12:24:29,453 copying build/lib/syntheseus/search/graph/message_passing/run.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph/message_passing 2024-04-11T12:24:29,453 copying build/lib/syntheseus/search/graph/message_passing/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph/message_passing 2024-04-11T12:24:29,454 copying build/lib/syntheseus/search/graph/message_passing/update_functions.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph/message_passing 2024-04-11T12:24:29,454 copying build/lib/syntheseus/search/graph/route.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph 2024-04-11T12:24:29,455 copying build/lib/syntheseus/search/graph/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph 2024-04-11T12:24:29,455 copying build/lib/syntheseus/search/graph/node.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph 2024-04-11T12:24:29,456 copying build/lib/syntheseus/search/graph/molset.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/graph 2024-04-11T12:24:29,457 creating build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms 2024-04-11T12:24:29,457 copying build/lib/syntheseus/search/algorithms/pdvn.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms 2024-04-11T12:24:29,458 copying build/lib/syntheseus/search/algorithms/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms 2024-04-11T12:24:29,458 copying build/lib/syntheseus/search/algorithms/breadth_first.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms 2024-04-11T12:24:29,458 copying build/lib/syntheseus/search/algorithms/mixins.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms 2024-04-11T12:24:29,459 creating build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/best_first 2024-04-11T12:24:29,459 copying build/lib/syntheseus/search/algorithms/best_first/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/best_first 2024-04-11T12:24:29,460 copying build/lib/syntheseus/search/algorithms/best_first/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/best_first 2024-04-11T12:24:29,460 copying build/lib/syntheseus/search/algorithms/best_first/retro_star.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/best_first 2024-04-11T12:24:29,461 copying build/lib/syntheseus/search/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms 2024-04-11T12:24:29,461 creating build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/mcts 2024-04-11T12:24:29,462 copying build/lib/syntheseus/search/algorithms/mcts/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/mcts 2024-04-11T12:24:29,462 copying build/lib/syntheseus/search/algorithms/mcts/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/mcts 2024-04-11T12:24:29,463 copying build/lib/syntheseus/search/algorithms/mcts/molset.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms/mcts 2024-04-11T12:24:29,463 copying build/lib/syntheseus/search/algorithms/random.py -> build/bdist.linux-armv7l/wheel/syntheseus/search/algorithms 2024-04-11T12:24:29,464 copying build/lib/syntheseus/search/mol_inventory.py -> build/bdist.linux-armv7l/wheel/syntheseus/search 2024-04-11T12:24:29,464 copying build/lib/syntheseus/search/visualization.py -> build/bdist.linux-armv7l/wheel/syntheseus/search 2024-04-11T12:24:29,465 copying build/lib/syntheseus/search/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/search 2024-04-11T12:24:29,465 creating build/bdist.linux-armv7l/wheel/syntheseus/tests 2024-04-11T12:24:29,466 copying build/lib/syntheseus/tests/conftest.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests 2024-04-11T12:24:29,466 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search 2024-04-11T12:24:29,467 copying build/lib/syntheseus/tests/search/conftest.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search 2024-04-11T12:24:29,468 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search/node_evaluation 2024-04-11T12:24:29,468 copying build/lib/syntheseus/tests/search/node_evaluation/test_common.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/node_evaluation 2024-04-11T12:24:29,469 copying build/lib/syntheseus/tests/search/node_evaluation/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/node_evaluation 2024-04-11T12:24:29,470 copying build/lib/syntheseus/tests/search/test_mol_inventory.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search 2024-04-11T12:24:29,472 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis 2024-04-11T12:24:29,473 copying build/lib/syntheseus/tests/search/analysis/conftest.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis 2024-04-11T12:24:29,475 copying build/lib/syntheseus/tests/search/analysis/test_solution_time.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis 2024-04-11T12:24:29,477 copying build/lib/syntheseus/tests/search/analysis/test_diversity.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis 2024-04-11T12:24:29,479 copying build/lib/syntheseus/tests/search/analysis/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis 2024-04-11T12:24:29,480 copying build/lib/syntheseus/tests/search/analysis/test_route_extraction.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/analysis 2024-04-11T12:24:29,483 copying build/lib/syntheseus/tests/search/test_visualization.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search 2024-04-11T12:24:29,485 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph 2024-04-11T12:24:29,486 copying build/lib/syntheseus/tests/search/graph/test_standardization.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph 2024-04-11T12:24:29,487 copying build/lib/syntheseus/tests/search/graph/test_message_passing.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph 2024-04-11T12:24:29,489 copying build/lib/syntheseus/tests/search/graph/test_base.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph 2024-04-11T12:24:29,491 copying build/lib/syntheseus/tests/search/graph/test_route.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph 2024-04-11T12:24:29,493 copying build/lib/syntheseus/tests/search/graph/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph 2024-04-11T12:24:29,494 copying build/lib/syntheseus/tests/search/graph/test_molset.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph 2024-04-11T12:24:29,496 copying build/lib/syntheseus/tests/search/graph/test_andor.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/graph 2024-04-11T12:24:29,499 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,500 copying build/lib/syntheseus/tests/search/algorithms/test_pdvn.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,503 copying build/lib/syntheseus/tests/search/algorithms/test_mcts.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,505 copying build/lib/syntheseus/tests/search/algorithms/test_base.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,508 copying build/lib/syntheseus/tests/search/algorithms/test_breadth_first.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,510 copying build/lib/syntheseus/tests/search/algorithms/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,512 copying build/lib/syntheseus/tests/search/algorithms/test_best_first.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,514 copying build/lib/syntheseus/tests/search/algorithms/test_random.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search/algorithms 2024-04-11T12:24:29,516 copying build/lib/syntheseus/tests/search/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/search 2024-04-11T12:24:29,518 copying build/lib/syntheseus/tests/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests 2024-04-11T12:24:29,520 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction 2024-04-11T12:24:29,522 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/data 2024-04-11T12:24:29,523 copying build/lib/syntheseus/tests/reaction_prediction/data/test_dataset.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/data 2024-04-11T12:24:29,526 copying build/lib/syntheseus/tests/reaction_prediction/data/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/data 2024-04-11T12:24:29,528 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/chem 2024-04-11T12:24:29,529 copying build/lib/syntheseus/tests/reaction_prediction/chem/test_utils.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/chem 2024-04-11T12:24:29,531 copying build/lib/syntheseus/tests/reaction_prediction/chem/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/chem 2024-04-11T12:24:29,533 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/utils 2024-04-11T12:24:29,534 copying build/lib/syntheseus/tests/reaction_prediction/utils/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/utils 2024-04-11T12:24:29,536 copying build/lib/syntheseus/tests/reaction_prediction/utils/test_misc.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/utils 2024-04-11T12:24:29,537 copying build/lib/syntheseus/tests/reaction_prediction/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction 2024-04-11T12:24:29,539 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/inference 2024-04-11T12:24:29,540 copying build/lib/syntheseus/tests/reaction_prediction/inference/test_models.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/inference 2024-04-11T12:24:29,542 copying build/lib/syntheseus/tests/reaction_prediction/inference/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/reaction_prediction/inference 2024-04-11T12:24:29,544 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/interface 2024-04-11T12:24:29,545 copying build/lib/syntheseus/tests/interface/test_molecule.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface 2024-04-11T12:24:29,549 copying build/lib/syntheseus/tests/interface/test_toy_models.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface 2024-04-11T12:24:29,551 copying build/lib/syntheseus/tests/interface/test_reaction.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface 2024-04-11T12:24:29,553 copying build/lib/syntheseus/tests/interface/test_models.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface 2024-04-11T12:24:29,556 copying build/lib/syntheseus/tests/interface/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface 2024-04-11T12:24:29,558 copying build/lib/syntheseus/tests/interface/test_bag.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/interface 2024-04-11T12:24:29,561 creating build/bdist.linux-armv7l/wheel/syntheseus/tests/cli 2024-04-11T12:24:29,563 copying build/lib/syntheseus/tests/cli/test_cli.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/cli 2024-04-11T12:24:29,567 copying build/lib/syntheseus/tests/cli/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/cli 2024-04-11T12:24:29,570 copying build/lib/syntheseus/tests/cli/test_eval_single_step.py -> build/bdist.linux-armv7l/wheel/syntheseus/tests/cli 2024-04-11T12:24:29,572 copying build/lib/syntheseus/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus 2024-04-11T12:24:29,574 creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction 2024-04-11T12:24:29,575 creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/data 2024-04-11T12:24:29,576 copying build/lib/syntheseus/reaction_prediction/data/dataset.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/data 2024-04-11T12:24:29,579 copying build/lib/syntheseus/reaction_prediction/data/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/data 2024-04-11T12:24:29,581 copying build/lib/syntheseus/reaction_prediction/data/reaction_sample.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/data 2024-04-11T12:24:29,583 creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/chem 2024-04-11T12:24:29,584 copying build/lib/syntheseus/reaction_prediction/chem/utils.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/chem 2024-04-11T12:24:29,587 copying build/lib/syntheseus/reaction_prediction/chem/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/chem 2024-04-11T12:24:29,590 creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/environment_gln 2024-04-11T12:24:29,591 copying build/lib/syntheseus/reaction_prediction/environment_gln/Dockerfile -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/environment_gln 2024-04-11T12:24:29,593 copying build/lib/syntheseus/reaction_prediction/environment_gln/environment.yml -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/environment_gln 2024-04-11T12:24:29,596 creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,597 copying build/lib/syntheseus/reaction_prediction/utils/parallel.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,600 copying build/lib/syntheseus/reaction_prediction/utils/testing.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,601 copying build/lib/syntheseus/reaction_prediction/utils/metrics.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,603 copying build/lib/syntheseus/reaction_prediction/utils/misc.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,605 copying build/lib/syntheseus/reaction_prediction/utils/downloading.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,606 copying build/lib/syntheseus/reaction_prediction/utils/inference.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,608 copying build/lib/syntheseus/reaction_prediction/utils/config.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,610 copying build/lib/syntheseus/reaction_prediction/utils/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,611 copying build/lib/syntheseus/reaction_prediction/utils/model_loading.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/utils 2024-04-11T12:24:29,613 creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/models 2024-04-11T12:24:29,614 copying build/lib/syntheseus/reaction_prediction/models/retro_knn.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/models 2024-04-11T12:24:29,616 copying build/lib/syntheseus/reaction_prediction/models/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/models 2024-04-11T12:24:29,617 copying build/lib/syntheseus/reaction_prediction/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction 2024-04-11T12:24:29,620 creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,620 copying build/lib/syntheseus/reaction_prediction/inference/retro_knn.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,623 copying build/lib/syntheseus/reaction_prediction/inference/local_retro.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,625 copying build/lib/syntheseus/reaction_prediction/inference/graph2edits.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,627 copying build/lib/syntheseus/reaction_prediction/inference/toy_models.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,629 copying build/lib/syntheseus/reaction_prediction/inference/root_aligned.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,631 copying build/lib/syntheseus/reaction_prediction/inference/default_checkpoint_links.yml -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,633 copying build/lib/syntheseus/reaction_prediction/inference/base.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,635 copying build/lib/syntheseus/reaction_prediction/inference/gln.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,637 copying build/lib/syntheseus/reaction_prediction/inference/mhnreact.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,639 copying build/lib/syntheseus/reaction_prediction/inference/chemformer.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,641 copying build/lib/syntheseus/reaction_prediction/inference/config.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,643 copying build/lib/syntheseus/reaction_prediction/inference/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,644 copying build/lib/syntheseus/reaction_prediction/inference/megan.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/inference 2024-04-11T12:24:29,646 creating build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/cli 2024-04-11T12:24:29,647 copying build/lib/syntheseus/reaction_prediction/cli/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/reaction_prediction/cli 2024-04-11T12:24:29,649 creating build/bdist.linux-armv7l/wheel/syntheseus/interface 2024-04-11T12:24:29,650 copying build/lib/syntheseus/interface/reaction.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface 2024-04-11T12:24:29,652 copying build/lib/syntheseus/interface/molecule.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface 2024-04-11T12:24:29,654 copying build/lib/syntheseus/interface/bag.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface 2024-04-11T12:24:29,655 copying build/lib/syntheseus/interface/typed_dict.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface 2024-04-11T12:24:29,657 copying build/lib/syntheseus/interface/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface 2024-04-11T12:24:29,658 copying build/lib/syntheseus/interface/models.py -> build/bdist.linux-armv7l/wheel/syntheseus/interface 2024-04-11T12:24:29,661 creating build/bdist.linux-armv7l/wheel/syntheseus/cli 2024-04-11T12:24:29,661 copying build/lib/syntheseus/cli/eval_single_step.py -> build/bdist.linux-armv7l/wheel/syntheseus/cli 2024-04-11T12:24:29,664 copying build/lib/syntheseus/cli/search.py -> build/bdist.linux-armv7l/wheel/syntheseus/cli 2024-04-11T12:24:29,666 copying build/lib/syntheseus/cli/search_config.yml -> build/bdist.linux-armv7l/wheel/syntheseus/cli 2024-04-11T12:24:29,668 copying build/lib/syntheseus/cli/__init__.py -> build/bdist.linux-armv7l/wheel/syntheseus/cli 2024-04-11T12:24:29,670 copying build/lib/syntheseus/cli/main.py -> build/bdist.linux-armv7l/wheel/syntheseus/cli 2024-04-11T12:24:29,671 running install_egg_info 2024-04-11T12:24:29,676 Copying syntheseus.egg-info to build/bdist.linux-armv7l/wheel/syntheseus-0.4.0-py3.11.egg-info 2024-04-11T12:24:29,687 running install_scripts 2024-04-11T12:24:29,706 creating build/bdist.linux-armv7l/wheel/syntheseus-0.4.0.dist-info/WHEEL 2024-04-11T12:24:29,708 creating '/tmp/pip-wheel-ru88wuyj/.tmp-snyzh8l_/syntheseus-0.4.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-11T12:24:29,710 adding 'syntheseus/__init__.py' 2024-04-11T12:24:29,712 adding 'syntheseus/py.typed' 2024-04-11T12:24:29,714 adding 'syntheseus/cli/__init__.py' 2024-04-11T12:24:29,717 adding 'syntheseus/cli/eval_single_step.py' 2024-04-11T12:24:29,718 adding 'syntheseus/cli/main.py' 2024-04-11T12:24:29,721 adding 'syntheseus/cli/search.py' 2024-04-11T12:24:29,723 adding 'syntheseus/cli/search_config.yml' 2024-04-11T12:24:29,724 adding 'syntheseus/interface/__init__.py' 2024-04-11T12:24:29,725 adding 'syntheseus/interface/bag.py' 2024-04-11T12:24:29,727 adding 'syntheseus/interface/models.py' 2024-04-11T12:24:29,729 adding 'syntheseus/interface/molecule.py' 2024-04-11T12:24:29,730 adding 'syntheseus/interface/reaction.py' 2024-04-11T12:24:29,731 adding 'syntheseus/interface/typed_dict.py' 2024-04-11T12:24:29,733 adding 'syntheseus/reaction_prediction/__init__.py' 2024-04-11T12:24:29,734 adding 'syntheseus/reaction_prediction/chem/__init__.py' 2024-04-11T12:24:29,736 adding 'syntheseus/reaction_prediction/chem/utils.py' 2024-04-11T12:24:29,737 adding 'syntheseus/reaction_prediction/cli/__init__.py' 2024-04-11T12:24:29,739 adding 'syntheseus/reaction_prediction/data/__init__.py' 2024-04-11T12:24:29,740 adding 'syntheseus/reaction_prediction/data/dataset.py' 2024-04-11T12:24:29,741 adding 'syntheseus/reaction_prediction/data/reaction_sample.py' 2024-04-11T12:24:29,743 adding 'syntheseus/reaction_prediction/environment_gln/Dockerfile' 2024-04-11T12:24:29,744 adding 'syntheseus/reaction_prediction/environment_gln/environment.yml' 2024-04-11T12:24:29,746 adding 'syntheseus/reaction_prediction/inference/__init__.py' 2024-04-11T12:24:29,747 adding 'syntheseus/reaction_prediction/inference/base.py' 2024-04-11T12:24:29,749 adding 'syntheseus/reaction_prediction/inference/chemformer.py' 2024-04-11T12:24:29,750 adding 'syntheseus/reaction_prediction/inference/config.py' 2024-04-11T12:24:29,751 adding 'syntheseus/reaction_prediction/inference/default_checkpoint_links.yml' 2024-04-11T12:24:29,752 adding 'syntheseus/reaction_prediction/inference/gln.py' 2024-04-11T12:24:29,754 adding 'syntheseus/reaction_prediction/inference/graph2edits.py' 2024-04-11T12:24:29,755 adding 'syntheseus/reaction_prediction/inference/local_retro.py' 2024-04-11T12:24:29,757 adding 'syntheseus/reaction_prediction/inference/megan.py' 2024-04-11T12:24:29,759 adding 'syntheseus/reaction_prediction/inference/mhnreact.py' 2024-04-11T12:24:29,760 adding 'syntheseus/reaction_prediction/inference/retro_knn.py' 2024-04-11T12:24:29,762 adding 'syntheseus/reaction_prediction/inference/root_aligned.py' 2024-04-11T12:24:29,763 adding 'syntheseus/reaction_prediction/inference/toy_models.py' 2024-04-11T12:24:29,765 adding 'syntheseus/reaction_prediction/models/__init__.py' 2024-04-11T12:24:29,766 adding 'syntheseus/reaction_prediction/models/retro_knn.py' 2024-04-11T12:24:29,768 adding 'syntheseus/reaction_prediction/utils/__init__.py' 2024-04-11T12:24:29,769 adding 'syntheseus/reaction_prediction/utils/config.py' 2024-04-11T12:24:29,771 adding 'syntheseus/reaction_prediction/utils/downloading.py' 2024-04-11T12:24:29,772 adding 'syntheseus/reaction_prediction/utils/inference.py' 2024-04-11T12:24:29,773 adding 'syntheseus/reaction_prediction/utils/metrics.py' 2024-04-11T12:24:29,775 adding 'syntheseus/reaction_prediction/utils/misc.py' 2024-04-11T12:24:29,776 adding 'syntheseus/reaction_prediction/utils/model_loading.py' 2024-04-11T12:24:29,777 adding 'syntheseus/reaction_prediction/utils/parallel.py' 2024-04-11T12:24:29,778 adding 'syntheseus/reaction_prediction/utils/testing.py' 2024-04-11T12:24:29,780 adding 'syntheseus/search/__init__.py' 2024-04-11T12:24:29,781 adding 'syntheseus/search/mol_inventory.py' 2024-04-11T12:24:29,783 adding 'syntheseus/search/visualization.py' 2024-04-11T12:24:29,785 adding 'syntheseus/search/algorithms/__init__.py' 2024-04-11T12:24:29,787 adding 'syntheseus/search/algorithms/base.py' 2024-04-11T12:24:29,788 adding 'syntheseus/search/algorithms/breadth_first.py' 2024-04-11T12:24:29,790 adding 'syntheseus/search/algorithms/mixins.py' 2024-04-11T12:24:29,792 adding 'syntheseus/search/algorithms/pdvn.py' 2024-04-11T12:24:29,794 adding 'syntheseus/search/algorithms/random.py' 2024-04-11T12:24:29,795 adding 'syntheseus/search/algorithms/best_first/__init__.py' 2024-04-11T12:24:29,797 adding 'syntheseus/search/algorithms/best_first/base.py' 2024-04-11T12:24:29,799 adding 'syntheseus/search/algorithms/best_first/retro_star.py' 2024-04-11T12:24:29,801 adding 'syntheseus/search/algorithms/mcts/__init__.py' 2024-04-11T12:24:29,803 adding 'syntheseus/search/algorithms/mcts/base.py' 2024-04-11T12:24:29,804 adding 'syntheseus/search/algorithms/mcts/molset.py' 2024-04-11T12:24:29,805 adding 'syntheseus/search/analysis/__init__.py' 2024-04-11T12:24:29,807 adding 'syntheseus/search/analysis/diversity.py' 2024-04-11T12:24:29,809 adding 'syntheseus/search/analysis/route_extraction.py' 2024-04-11T12:24:29,810 adding 'syntheseus/search/analysis/solution_time.py' 2024-04-11T12:24:29,812 adding 'syntheseus/search/graph/__init__.py' 2024-04-11T12:24:29,814 adding 'syntheseus/search/graph/and_or.py' 2024-04-11T12:24:29,815 adding 'syntheseus/search/graph/base_graph.py' 2024-04-11T12:24:29,816 adding 'syntheseus/search/graph/molset.py' 2024-04-11T12:24:29,818 adding 'syntheseus/search/graph/node.py' 2024-04-11T12:24:29,819 adding 'syntheseus/search/graph/route.py' 2024-04-11T12:24:29,821 adding 'syntheseus/search/graph/standardization.py' 2024-04-11T12:24:29,822 adding 'syntheseus/search/graph/message_passing/__init__.py' 2024-04-11T12:24:29,824 adding 'syntheseus/search/graph/message_passing/run.py' 2024-04-11T12:24:29,825 adding 'syntheseus/search/graph/message_passing/update_functions.py' 2024-04-11T12:24:29,827 adding 'syntheseus/search/node_evaluation/__init__.py' 2024-04-11T12:24:29,828 adding 'syntheseus/search/node_evaluation/base.py' 2024-04-11T12:24:29,830 adding 'syntheseus/search/node_evaluation/common.py' 2024-04-11T12:24:29,832 adding 'syntheseus/search/utils/__init__.py' 2024-04-11T12:24:29,833 adding 'syntheseus/search/utils/misc.py' 2024-04-11T12:24:29,834 adding 'syntheseus/tests/__init__.py' 2024-04-11T12:24:29,835 adding 'syntheseus/tests/conftest.py' 2024-04-11T12:24:29,837 adding 'syntheseus/tests/cli/__init__.py' 2024-04-11T12:24:29,838 adding 'syntheseus/tests/cli/test_cli.py' 2024-04-11T12:24:29,840 adding 'syntheseus/tests/cli/test_eval_single_step.py' 2024-04-11T12:24:29,842 adding 'syntheseus/tests/interface/__init__.py' 2024-04-11T12:24:29,843 adding 'syntheseus/tests/interface/test_bag.py' 2024-04-11T12:24:29,844 adding 'syntheseus/tests/interface/test_models.py' 2024-04-11T12:24:29,846 adding 'syntheseus/tests/interface/test_molecule.py' 2024-04-11T12:24:29,847 adding 'syntheseus/tests/interface/test_reaction.py' 2024-04-11T12:24:29,848 adding 'syntheseus/tests/interface/test_toy_models.py' 2024-04-11T12:24:29,850 adding 'syntheseus/tests/reaction_prediction/__init__.py' 2024-04-11T12:24:29,851 adding 'syntheseus/tests/reaction_prediction/chem/__init__.py' 2024-04-11T12:24:29,853 adding 'syntheseus/tests/reaction_prediction/chem/test_utils.py' 2024-04-11T12:24:29,854 adding 'syntheseus/tests/reaction_prediction/data/__init__.py' 2024-04-11T12:24:29,856 adding 'syntheseus/tests/reaction_prediction/data/test_dataset.py' 2024-04-11T12:24:29,857 adding 'syntheseus/tests/reaction_prediction/inference/__init__.py' 2024-04-11T12:24:29,859 adding 'syntheseus/tests/reaction_prediction/inference/test_models.py' 2024-04-11T12:24:29,860 adding 'syntheseus/tests/reaction_prediction/utils/__init__.py' 2024-04-11T12:24:29,862 adding 'syntheseus/tests/reaction_prediction/utils/test_misc.py' 2024-04-11T12:24:29,863 adding 'syntheseus/tests/search/__init__.py' 2024-04-11T12:24:29,865 adding 'syntheseus/tests/search/conftest.py' 2024-04-11T12:24:29,867 adding 'syntheseus/tests/search/test_mol_inventory.py' 2024-04-11T12:24:29,868 adding 'syntheseus/tests/search/test_visualization.py' 2024-04-11T12:24:29,870 adding 'syntheseus/tests/search/algorithms/__init__.py' 2024-04-11T12:24:29,873 adding 'syntheseus/tests/search/algorithms/test_base.py' 2024-04-11T12:24:29,875 adding 'syntheseus/tests/search/algorithms/test_best_first.py' 2024-04-11T12:24:29,876 adding 'syntheseus/tests/search/algorithms/test_breadth_first.py' 2024-04-11T12:24:29,878 adding 'syntheseus/tests/search/algorithms/test_mcts.py' 2024-04-11T12:24:29,880 adding 'syntheseus/tests/search/algorithms/test_pdvn.py' 2024-04-11T12:24:29,882 adding 'syntheseus/tests/search/algorithms/test_random.py' 2024-04-11T12:24:29,883 adding 'syntheseus/tests/search/analysis/__init__.py' 2024-04-11T12:24:29,884 adding 'syntheseus/tests/search/analysis/conftest.py' 2024-04-11T12:24:29,886 adding 'syntheseus/tests/search/analysis/test_diversity.py' 2024-04-11T12:24:29,888 adding 'syntheseus/tests/search/analysis/test_route_extraction.py' 2024-04-11T12:24:29,889 adding 'syntheseus/tests/search/analysis/test_solution_time.py' 2024-04-11T12:24:29,891 adding 'syntheseus/tests/search/graph/__init__.py' 2024-04-11T12:24:29,892 adding 'syntheseus/tests/search/graph/test_andor.py' 2024-04-11T12:24:29,893 adding 'syntheseus/tests/search/graph/test_base.py' 2024-04-11T12:24:29,895 adding 'syntheseus/tests/search/graph/test_message_passing.py' 2024-04-11T12:24:29,896 adding 'syntheseus/tests/search/graph/test_molset.py' 2024-04-11T12:24:29,897 adding 'syntheseus/tests/search/graph/test_route.py' 2024-04-11T12:24:29,898 adding 'syntheseus/tests/search/graph/test_standardization.py' 2024-04-11T12:24:29,900 adding 'syntheseus/tests/search/node_evaluation/__init__.py' 2024-04-11T12:24:29,901 adding 'syntheseus/tests/search/node_evaluation/test_common.py' 2024-04-11T12:24:29,903 adding 'syntheseus-0.4.0.dist-info/LICENSE' 2024-04-11T12:24:29,905 adding 'syntheseus-0.4.0.dist-info/METADATA' 2024-04-11T12:24:29,906 adding 'syntheseus-0.4.0.dist-info/WHEEL' 2024-04-11T12:24:29,906 adding 'syntheseus-0.4.0.dist-info/entry_points.txt' 2024-04-11T12:24:29,908 adding 'syntheseus-0.4.0.dist-info/top_level.txt' 2024-04-11T12:24:29,910 adding 'syntheseus-0.4.0.dist-info/RECORD' 2024-04-11T12:24:29,914 removing build/bdist.linux-armv7l/wheel 2024-04-11T12:24:30,080 Building wheel for syntheseus (pyproject.toml): finished with status 'done' 2024-04-11T12:24:30,090 Created wheel for syntheseus: filename=syntheseus-0.4.0-py3-none-any.whl size=165905 sha256=463ded202c9836004fe3f88bc395278cedfb1aa557dee025729f5dd5b076c505 2024-04-11T12:24:30,091 Stored in directory: /tmp/pip-ephem-wheel-cache-c3rz0anq/wheels/e3/65/ad/5d6d6f906f95be9b9088025d92a863814bf69eb7b9f312ac69 2024-04-11T12:24:30,107 Successfully built syntheseus 2024-04-11T12:24:30,119 Removed build tracker: '/tmp/pip-build-tracker-r4ibzdu5'