2024-04-18T15:49:30,611 Created temporary directory: /tmp/pip-build-tracker-i16pxs93 2024-04-18T15:49:30,613 Initialized build tracking at /tmp/pip-build-tracker-i16pxs93 2024-04-18T15:49:30,613 Created build tracker: /tmp/pip-build-tracker-i16pxs93 2024-04-18T15:49:30,613 Entered build tracker: /tmp/pip-build-tracker-i16pxs93 2024-04-18T15:49:30,613 Created temporary directory: /tmp/pip-wheel-aeirsfys 2024-04-18T15:49:30,618 Created temporary directory: /tmp/pip-ephem-wheel-cache-977t7u1l 2024-04-18T15:49:30,645 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-18T15:49:30,649 2 location(s) to search for versions of pyjess: 2024-04-18T15:49:30,649 * https://pypi.org/simple/pyjess/ 2024-04-18T15:49:30,649 * https://www.piwheels.org/simple/pyjess/ 2024-04-18T15:49:30,649 Fetching project page and analyzing links: https://pypi.org/simple/pyjess/ 2024-04-18T15:49:30,650 Getting page https://pypi.org/simple/pyjess/ 2024-04-18T15:49:30,651 Found index url https://pypi.org/simple/ 2024-04-18T15:49:30,703 Fetched page https://pypi.org/simple/pyjess/ as application/vnd.pypi.simple.v1+json 2024-04-18T15:49:30,711 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/f7/30/5e78014d6334257c5769c3404317240f3b33109c3bf0763e2c6846a636af/pyjess-0.1.0-cp310-cp310-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,711 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/4b/a1/ae3808dd9d957f1c67d915fb46ca8979c5387cb7528b1f31c2d4b53de9a5/pyjess-0.1.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,711 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/9b/8d/15b77c22301389b8b8dcf96ce0ac0f9b0ca9b664bd0426da4bca35a11929/pyjess-0.1.0-cp310-cp310-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,712 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/b9/ab/fb9fa464e8d1352a4b11eab0c426a4a33e79f0cb2a7eaa78a052dfa49af5/pyjess-0.1.0-cp311-cp311-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,712 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/c8/6b/e041f9e89157bcf9d01b0e39c12e88e7e6d50b096011e1481f135c71c33a/pyjess-0.1.0-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,712 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/5c/1d/3eb3effb9d0b17c5c59cd2b375279251172e95c7b3d6528ab0611b6d748f/pyjess-0.1.0-cp311-cp311-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,712 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/c4/ce/08e02b2a864819e51930b66d245129790410370b7a9256ce666a5559d95f/pyjess-0.1.0-cp312-cp312-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,712 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/a8/12/30c808825602d8ffa594462680540248a6ef090ac13d520be75793cbceaa/pyjess-0.1.0-cp312-cp312-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,713 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/6d/c8/94e23df9725d537d19e67bf5c036bc93db91242bd7b914a6144e4d821cf1/pyjess-0.1.0-cp312-cp312-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,713 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/99/7f/593d21dbaa27950142a8b8b397aa1cd97cfbb26f310c85534e3479990ac5/pyjess-0.1.0-cp36-cp36m-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,713 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/34/de/0c25a11a336fa092ef2917f69b974cb57e022abf4366518de277a5d97e8e/pyjess-0.1.0-cp36-cp36m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,713 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/7b/34/cc5920aa214d7ccdf0ad1d654561e0c705ee0fc278f281a1271cefbe537a/pyjess-0.1.0-cp36-cp36m-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,713 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/ff/a9/46445ed8d4c24389b030f60aa0a7ffbccf0fab1b923a21e299920414c2de/pyjess-0.1.0-cp37-cp37m-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,714 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/ab/3d/172e67e4558ef57e7a2dbc32b7fbd4dd52318abde858df216e20ed60ffd6/pyjess-0.1.0-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,714 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/a2/e7/f678f6c53042afc3d82b1bb9e30500057b77ba535b86890b9e45f970c0bd/pyjess-0.1.0-cp37-cp37m-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,714 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/c1/89/85a1236838afbfa612573d8138cb792d9775f1111eadd1fbfd36a8cf4af6/pyjess-0.1.0-cp38-cp38-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,714 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/f0/8b/c76fc7ce0c3e8d0b86267de24c422158f16f6137a3834bf091656af2fcbc/pyjess-0.1.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,714 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/73/65/4d6e670cd5a80a8b77b07b78f2a6bae303e0d622143c3e83d895d9520a1c/pyjess-0.1.0-cp38-cp38-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,715 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/a1/ff/79680a33c7fcf4bfec97d1ad80918792adf704c3a05cb8a44581dd33495c/pyjess-0.1.0-cp39-cp39-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,715 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/13/bb/ae8e4c5ac5a19c9b314c2dd4a73934c2a72075f5c406756240fc3ff70404/pyjess-0.1.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,715 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/d1/a6/3a75d7ee57c04e99989e2aa8c577e4f42efaa2274514bca48c2475fca22c/pyjess-0.1.0-cp39-cp39-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,715 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/d4/1a/8074257a701c562af5f26371b2932453b77fcae444274930ee3029388b7b/pyjess-0.1.0-pp310-pypy310_pp73-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,715 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/4e/d6/f3da6fa437b4c788e33dd2209498fdd06f2662155679c9744ce89115eb1f/pyjess-0.1.0-pp310-pypy310_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,716 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/50/09/98d42b35f0102efdc539087bf87427f0ee10f0dd9e512c44b32426086c81/pyjess-0.1.0-pp310-pypy310_pp73-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,716 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/ae/b8/7d3cb93e99d3e7bf36bc41c2e514432ee2f576e0bce503a601836bb6cec0/pyjess-0.1.0-pp37-pypy37_pp73-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,716 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/14/84/fa855fac5db5d8708ecf6d68e361b89a2a2821dd3748980498cce3f8758d/pyjess-0.1.0-pp37-pypy37_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,716 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/43/93/fe81b6d25c9f6a2a78a281c153ad81dab8e24aa7bf896af1737f3a68a029/pyjess-0.1.0-pp37-pypy37_pp73-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,716 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/1c/6b/c5d42d569ce9e76294ae8e071cb0b8453a44ce00e0914292be2aced22e7e/pyjess-0.1.0-pp38-pypy38_pp73-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,717 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/d4/94/eb8e31386bb4c97c4cb7164e46798d71e3611e6d4e6e59467dad11ba5295/pyjess-0.1.0-pp38-pypy38_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,717 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/ac/2a/d8d83e68dfd48e96772424e20206ea061e116da9ad3eb807fe847cf27947/pyjess-0.1.0-pp38-pypy38_pp73-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,717 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/c1/cf/a36c81543dd8d7f5c9e9767c7ce9bede1fdf7e89d931fe4ed7cae3e7caa2/pyjess-0.1.0-pp39-pypy39_pp73-macosx_10_12_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,717 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/d7/5e/65259565e8f64b7d384f23d69c06e5654df9efc1a5566b73ae69428848e0/pyjess-0.1.0-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,717 Skipping link: No binaries permitted for pyjess: https://files.pythonhosted.org/packages/4f/61/192c48602647cb8ca3a925eb740893165df3d22afe3b2c44eeeb3397c77b/pyjess-0.1.0-pp39-pypy39_pp73-win_amd64.whl (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,718 Found link https://files.pythonhosted.org/packages/e5/8f/0b83bba0aec40e84d6793fce707761adca7284922373045628de1d7d5b1b/pyjess-0.1.0.tar.gz (from https://pypi.org/simple/pyjess/) (requires-python:>=3.5), version: 0.1.0 2024-04-18T15:49:30,718 Fetching project page and analyzing links: https://www.piwheels.org/simple/pyjess/ 2024-04-18T15:49:30,719 Getting page https://www.piwheels.org/simple/pyjess/ 2024-04-18T15:49:30,720 Found index url https://www.piwheels.org/simple/ 2024-04-18T15:49:30,894 Fetched page https://www.piwheels.org/simple/pyjess/ as text/html 2024-04-18T15:49:30,897 Skipping link: No binaries permitted for pyjess: https://www.piwheels.org/simple/pyjess/pyjess-0.1.0-cp311-cp311-linux_armv6l.whl#sha256=13f5fa70d82a5119953407d64045630eb94daa1235e792dacb3d24645a3d9927 (from https://www.piwheels.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,898 Skipping link: No binaries permitted for pyjess: https://www.piwheels.org/simple/pyjess/pyjess-0.1.0-cp311-cp311-linux_armv7l.whl#sha256=13f5fa70d82a5119953407d64045630eb94daa1235e792dacb3d24645a3d9927 (from https://www.piwheels.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,898 Skipping link: No binaries permitted for pyjess: https://www.piwheels.org/simple/pyjess/pyjess-0.1.0-cp37-cp37m-linux_armv6l.whl#sha256=2986707bf88e6fd7d09c9e0d646da94bc3c6c6ee931b1281e4a0efd94a2a614c (from https://www.piwheels.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,898 Skipping link: No binaries permitted for pyjess: https://www.piwheels.org/simple/pyjess/pyjess-0.1.0-cp37-cp37m-linux_armv7l.whl#sha256=2986707bf88e6fd7d09c9e0d646da94bc3c6c6ee931b1281e4a0efd94a2a614c (from https://www.piwheels.org/simple/pyjess/) (requires-python:>=3.5) 2024-04-18T15:49:30,899 Skipping link: not a file: https://www.piwheels.org/simple/pyjess/ 2024-04-18T15:49:30,899 Skipping link: not a file: https://pypi.org/simple/pyjess/ 2024-04-18T15:49:30,924 Given no hashes to check 1 links for project 'pyjess': discarding no candidates 2024-04-18T15:49:30,949 Collecting pyjess==0.1.0 2024-04-18T15:49:30,951 Created temporary directory: /tmp/pip-unpack-67fa337f 2024-04-18T15:49:31,010 Downloading pyjess-0.1.0.tar.gz (209 kB) 2024-04-18T15:49:31,231 Added pyjess==0.1.0 from https://files.pythonhosted.org/packages/e5/8f/0b83bba0aec40e84d6793fce707761adca7284922373045628de1d7d5b1b/pyjess-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-i16pxs93' 2024-04-18T15:49:31,236 Created temporary directory: /tmp/pip-build-env-cxpdlyp6 2024-04-18T15:49:31,246 Installing build dependencies: started 2024-04-18T15:49:31,247 Running command pip subprocess to install build dependencies 2024-04-18T15:49:32,392 Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2024-04-18T15:49:32,918 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-18T15:49:35,531 Collecting setuptools>=46.4 2024-04-18T15:49:35,548 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB) 2024-04-18T15:49:36,920 Collecting cython~=3.0 2024-04-18T15:49:36,939 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.10-cp39-cp39-linux_armv7l.whl (10.7 MB) 2024-04-18T15:49:39,071 Installing collected packages: setuptools, cython 2024-04-18T15:49:44,757 Creating /tmp/pip-build-env-cxpdlyp6/overlay/bin 2024-04-18T15:49:44,759 changing mode of /tmp/pip-build-env-cxpdlyp6/overlay/bin/cygdb to 755 2024-04-18T15:49:44,761 changing mode of /tmp/pip-build-env-cxpdlyp6/overlay/bin/cython to 755 2024-04-18T15:49:44,763 changing mode of /tmp/pip-build-env-cxpdlyp6/overlay/bin/cythonize to 755 2024-04-18T15:49:44,783 Successfully installed cython-3.0.10 setuptools-69.5.1 2024-04-18T15:49:45,336 Installing build dependencies: finished with status 'done' 2024-04-18T15:49:45,340 Getting requirements to build wheel: started 2024-04-18T15:49:45,341 Running command Getting requirements to build wheel 2024-04-18T15:49:46,301 Getting requirements to build wheel: finished with status 'done' 2024-04-18T15:49:46,316 Installing backend dependencies: started 2024-04-18T15:49:46,317 Running command pip subprocess to install backend dependencies 2024-04-18T15:49:47,482 Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2024-04-18T15:49:48,013 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-18T15:49:48,490 Collecting wheel 2024-04-18T15:49:48,509 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-04-18T15:49:50,008 Installing collected packages: wheel 2024-04-18T15:49:50,228 Creating /tmp/pip-build-env-cxpdlyp6/normal/bin 2024-04-18T15:49:50,230 changing mode of /tmp/pip-build-env-cxpdlyp6/normal/bin/wheel to 755 2024-04-18T15:49:50,243 Successfully installed wheel-0.43.0 2024-04-18T15:49:50,638 Installing backend dependencies: finished with status 'done' 2024-04-18T15:49:50,641 Created temporary directory: /tmp/pip-modern-metadata-jnr79cbe 2024-04-18T15:49:50,643 Preparing metadata (pyproject.toml): started 2024-04-18T15:49:50,644 Running command Preparing metadata (pyproject.toml) 2024-04-18T15:49:51,530 running dist_info 2024-04-18T15:49:51,539 creating /tmp/pip-modern-metadata-jnr79cbe/pyjess.egg-info 2024-04-18T15:49:51,543 writing /tmp/pip-modern-metadata-jnr79cbe/pyjess.egg-info/PKG-INFO 2024-04-18T15:49:51,547 writing dependency_links to /tmp/pip-modern-metadata-jnr79cbe/pyjess.egg-info/dependency_links.txt 2024-04-18T15:49:51,550 writing top-level names to /tmp/pip-modern-metadata-jnr79cbe/pyjess.egg-info/top_level.txt 2024-04-18T15:49:51,551 writing manifest file '/tmp/pip-modern-metadata-jnr79cbe/pyjess.egg-info/SOURCES.txt' 2024-04-18T15:49:51,578 reading manifest file '/tmp/pip-modern-metadata-jnr79cbe/pyjess.egg-info/SOURCES.txt' 2024-04-18T15:49:51,580 reading manifest template 'MANIFEST.in' 2024-04-18T15:49:51,611 warning: no files found matching '*.pxi' under directory 'pyjess' 2024-04-18T15:49:51,625 warning: no files found matching '*.pxd' under directory 'pyjess' 2024-04-18T15:49:51,632 warning: no files found matching '*.h' under directory 'pyjess' 2024-04-18T15:49:51,650 warning: no files found matching 'LICENSE' under directory 'vendor/jess' 2024-04-18T15:49:51,655 warning: no files found matching 'AUTHORS' under directory 'vendor/jess' 2024-04-18T15:49:51,660 warning: no files found matching 'CHANGELOG' under directory 'vendor/jess' 2024-04-18T15:49:51,678 no previously-included directories found matching 'vendor/sword/vendor' 2024-04-18T15:49:51,698 warning: no files found matching '*.pxi' under directory 'pyjess' 2024-04-18T15:49:51,712 warning: no files found matching '*.pxd' under directory 'pyjess' 2024-04-18T15:49:51,719 warning: no files found matching '*.h' under directory 'pyjess' 2024-04-18T15:49:51,723 warning: no previously-included files matching '*.cpp' found under directory 'pyjess' 2024-04-18T15:49:51,724 warning: no previously-included files matching '*.html' found under directory 'pyjess' 2024-04-18T15:49:51,724 adding license file 'COPYING' 2024-04-18T15:49:51,729 writing manifest file '/tmp/pip-modern-metadata-jnr79cbe/pyjess.egg-info/SOURCES.txt' 2024-04-18T15:49:51,730 creating '/tmp/pip-modern-metadata-jnr79cbe/pyjess-0.1.0.dist-info' 2024-04-18T15:49:51,909 Preparing metadata (pyproject.toml): finished with status 'done' 2024-04-18T15:49:51,915 Source in /tmp/pip-wheel-aeirsfys/pyjess_3200bef15d6f4bceb2742a454655bbfe has version 0.1.0, which satisfies requirement pyjess==0.1.0 from https://files.pythonhosted.org/packages/e5/8f/0b83bba0aec40e84d6793fce707761adca7284922373045628de1d7d5b1b/pyjess-0.1.0.tar.gz 2024-04-18T15:49:51,916 Removed pyjess==0.1.0 from https://files.pythonhosted.org/packages/e5/8f/0b83bba0aec40e84d6793fce707761adca7284922373045628de1d7d5b1b/pyjess-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-i16pxs93' 2024-04-18T15:49:51,923 Created temporary directory: /tmp/pip-unpack-oskqv9zp 2024-04-18T15:49:51,923 Created temporary directory: /tmp/pip-unpack-f_ho83e4 2024-04-18T15:49:51,926 Building wheels for collected packages: pyjess 2024-04-18T15:49:51,930 Created temporary directory: /tmp/pip-wheel-roev3yex 2024-04-18T15:49:51,931 Destination directory: /tmp/pip-wheel-roev3yex 2024-04-18T15:49:51,933 Building wheel for pyjess (pyproject.toml): started 2024-04-18T15:49:51,934 Running command Building wheel for pyjess (pyproject.toml) 2024-04-18T15:49:52,860 running bdist_wheel 2024-04-18T15:49:52,891 running build 2024-04-18T15:49:52,891 running build_py 2024-04-18T15:49:52,899 creating build 2024-04-18T15:49:52,900 creating build/lib.linux-armv7l-cpython-39 2024-04-18T15:49:52,901 creating build/lib.linux-armv7l-cpython-39/pyjess 2024-04-18T15:49:52,902 copying pyjess/__init__.py -> build/lib.linux-armv7l-cpython-39/pyjess 2024-04-18T15:49:52,904 creating build/lib.linux-armv7l-cpython-39/pyjess/tests 2024-04-18T15:49:52,905 copying pyjess/tests/test_template_atom.py -> build/lib.linux-armv7l-cpython-39/pyjess/tests 2024-04-18T15:49:52,907 copying pyjess/tests/test_template.py -> build/lib.linux-armv7l-cpython-39/pyjess/tests 2024-04-18T15:49:52,909 copying pyjess/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/pyjess/tests 2024-04-18T15:49:52,910 copying pyjess/tests/test_jess.py -> build/lib.linux-armv7l-cpython-39/pyjess/tests 2024-04-18T15:49:52,912 copying pyjess/tests/utils.py -> build/lib.linux-armv7l-cpython-39/pyjess/tests 2024-04-18T15:49:52,914 copying pyjess/tests/test_atom.py -> build/lib.linux-armv7l-cpython-39/pyjess/tests 2024-04-18T15:49:52,915 copying pyjess/tests/test_molecule.py -> build/lib.linux-armv7l-cpython-39/pyjess/tests 2024-04-18T15:49:52,918 creating build/lib.linux-armv7l-cpython-39/pyjess/tests/data 2024-04-18T15:49:52,918 copying pyjess/tests/data/__init__.py -> build/lib.linux-armv7l-cpython-39/pyjess/tests/data 2024-04-18T15:49:52,923 copying pyjess/_jess.pyi -> build/lib.linux-armv7l-cpython-39/pyjess 2024-04-18T15:49:52,925 copying pyjess/py.typed -> build/lib.linux-armv7l-cpython-39/pyjess 2024-04-18T15:49:52,927 copying pyjess/tests/data/1.3.3.tpl -> build/lib.linux-armv7l-cpython-39/pyjess/tests/data 2024-04-18T15:49:52,929 copying pyjess/tests/data/1AMY+1.3.3.txt -> build/lib.linux-armv7l-cpython-39/pyjess/tests/data 2024-04-18T15:49:52,933 copying pyjess/tests/data/1AMY.pdb -> build/lib.linux-armv7l-cpython-39/pyjess/tests/data 2024-04-18T15:49:52,940 copying pyjess/tests/data/template_01.qry -> build/lib.linux-armv7l-cpython-39/pyjess/tests/data 2024-04-18T15:49:52,942 copying pyjess/tests/data/pdb1lnb.pdb -> build/lib.linux-armv7l-cpython-39/pyjess/tests/data 2024-04-18T15:49:52,950 copying pyjess/tests/data/template_02.qry -> build/lib.linux-armv7l-cpython-39/pyjess/tests/data 2024-04-18T15:49:52,953 running build_clib 2024-04-18T15:49:52,961 creating build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,962 generating build/temp.linux-armv7l-cpython-39/libjess.a from vendor/jess/src/Annulus.c, vendor/jess/src/Atom.c, vendor/jess/src/Jess.c, vendor/jess/src/Join.c, vendor/jess/src/KdTree.c, vendor/jess/src/Molecule.c, vendor/jess/src/Region.c, vendor/jess/src/Scanner.c, vendor/jess/src/Super.c, vendor/jess/src/TessAtom.c, vendor/jess/src/TessTemplate.c 2024-04-18T15:49:52,962 building jess with unix compiler 2024-04-18T15:49:52,963 generating build/temp.linux-armv7l-cpython-39/Annulus.h from vendor/jess/src/Annulus.h 2024-04-18T15:49:52,963 copying vendor/jess/src/Annulus.h -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,965 generating build/temp.linux-armv7l-cpython-39/Atom.h from vendor/jess/src/Atom.h 2024-04-18T15:49:52,966 patching vendor/jess/src/Atom.h with patches/Atom.h.patch 2024-04-18T15:49:52,968 generating build/temp.linux-armv7l-cpython-39/Jess.h from vendor/jess/src/Jess.h 2024-04-18T15:49:52,969 copying vendor/jess/src/Jess.h -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,970 generating build/temp.linux-armv7l-cpython-39/Join.h from vendor/jess/src/Join.h 2024-04-18T15:49:52,971 copying vendor/jess/src/Join.h -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,973 generating build/temp.linux-armv7l-cpython-39/KdTree.h from vendor/jess/src/KdTree.h 2024-04-18T15:49:52,974 copying vendor/jess/src/KdTree.h -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,975 generating build/temp.linux-armv7l-cpython-39/Molecule.h from vendor/jess/src/Molecule.h 2024-04-18T15:49:52,976 patching vendor/jess/src/Molecule.h with patches/Molecule.h.patch 2024-04-18T15:49:52,978 generating build/temp.linux-armv7l-cpython-39/Region.h from vendor/jess/src/Region.h 2024-04-18T15:49:52,978 copying vendor/jess/src/Region.h -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,980 generating build/temp.linux-armv7l-cpython-39/Scanner.h from vendor/jess/src/Scanner.h 2024-04-18T15:49:52,981 copying vendor/jess/src/Scanner.h -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,982 generating build/temp.linux-armv7l-cpython-39/Super.h from vendor/jess/src/Super.h 2024-04-18T15:49:52,983 copying vendor/jess/src/Super.h -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,985 generating build/temp.linux-armv7l-cpython-39/Template.h from vendor/jess/src/Template.h 2024-04-18T15:49:52,985 patching vendor/jess/src/Template.h with patches/Template.h.patch 2024-04-18T15:49:52,987 generating build/temp.linux-armv7l-cpython-39/TessAtom.h from vendor/jess/src/TessAtom.h 2024-04-18T15:49:52,988 patching vendor/jess/src/TessAtom.h with patches/TessAtom.h.patch 2024-04-18T15:49:52,990 generating build/temp.linux-armv7l-cpython-39/TessTemplate.h from vendor/jess/src/TessTemplate.h 2024-04-18T15:49:52,990 patching vendor/jess/src/TessTemplate.h with patches/TessTemplate.h.patch 2024-04-18T15:49:52,992 generating build/temp.linux-armv7l-cpython-39/Annulus.c from vendor/jess/src/Annulus.c 2024-04-18T15:49:52,993 copying vendor/jess/src/Annulus.c -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,995 generating build/temp.linux-armv7l-cpython-39/Atom.c from vendor/jess/src/Atom.c 2024-04-18T15:49:52,995 copying vendor/jess/src/Atom.c -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:52,997 generating build/temp.linux-armv7l-cpython-39/Jess.c from vendor/jess/src/Jess.c 2024-04-18T15:49:52,998 patching vendor/jess/src/Jess.c with patches/Jess.c.patch 2024-04-18T15:49:53,000 generating build/temp.linux-armv7l-cpython-39/Join.c from vendor/jess/src/Join.c 2024-04-18T15:49:53,001 copying vendor/jess/src/Join.c -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:53,002 generating build/temp.linux-armv7l-cpython-39/KdTree.c from vendor/jess/src/KdTree.c 2024-04-18T15:49:53,003 copying vendor/jess/src/KdTree.c -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:53,005 generating build/temp.linux-armv7l-cpython-39/Molecule.c from vendor/jess/src/Molecule.c 2024-04-18T15:49:53,006 patching vendor/jess/src/Molecule.c with patches/Molecule.c.patch 2024-04-18T15:49:53,008 generating build/temp.linux-armv7l-cpython-39/Region.c from vendor/jess/src/Region.c 2024-04-18T15:49:53,008 copying vendor/jess/src/Region.c -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:53,010 generating build/temp.linux-armv7l-cpython-39/Scanner.c from vendor/jess/src/Scanner.c 2024-04-18T15:49:53,011 copying vendor/jess/src/Scanner.c -> build/temp.linux-armv7l-cpython-39 2024-04-18T15:49:53,013 generating build/temp.linux-armv7l-cpython-39/Super.c from vendor/jess/src/Super.c 2024-04-18T15:49:53,013 patching vendor/jess/src/Super.c with patches/Super.c.patch 2024-04-18T15:49:53,017 generating build/temp.linux-armv7l-cpython-39/TessAtom.c from vendor/jess/src/TessAtom.c 2024-04-18T15:49:53,017 patching vendor/jess/src/TessAtom.c with patches/TessAtom.c.patch 2024-04-18T15:49:53,020 generating build/temp.linux-armv7l-cpython-39/TessTemplate.c from vendor/jess/src/TessTemplate.c 2024-04-18T15:49:53,020 patching vendor/jess/src/TessTemplate.c with patches/TessTemplate.c.patch 2024-04-18T15:49:53,034 generating build/temp.linux-armv7l-cpython-39/Atom.o from build/temp.linux-armv7l-cpython-39/Atom.c 2024-04-18T15:49:53,034 generating build/temp.linux-armv7l-cpython-39/Annulus.o from build/temp.linux-armv7l-cpython-39/Annulus.c 2024-04-18T15:49:53,035 generating build/temp.linux-armv7l-cpython-39/Jess.o from build/temp.linux-armv7l-cpython-39/Jess.c 2024-04-18T15:49:53,036 generating build/temp.linux-armv7l-cpython-39/Join.o from build/temp.linux-armv7l-cpython-39/Join.c 2024-04-18T15:49:53,036 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Atom.c -o build/temp.linux-armv7l-cpython-39/Atom.o 2024-04-18T15:49:53,036 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Annulus.c -o build/temp.linux-armv7l-cpython-39/Annulus.o 2024-04-18T15:49:53,037 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Jess.c -o build/temp.linux-armv7l-cpython-39/Jess.o 2024-04-18T15:49:53,037 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Join.c -o build/temp.linux-armv7l-cpython-39/Join.o 2024-04-18T15:49:53,181 build/temp.linux-armv7l-cpython-39/Annulus.c: In function ‘Annulus_ro’: 2024-04-18T15:49:53,181 build/temp.linux-armv7l-cpython-39/Annulus.c:66:12: warning: unused variable ‘t4’ [-Wunused-variable] 2024-04-18T15:49:53,181 66 | double t3,t4; 2024-04-18T15:49:53,182 | ^~ 2024-04-18T15:49:53,183 build/temp.linux-armv7l-cpython-39/Annulus.c:66:9: warning: unused variable ‘t3’ [-Wunused-variable] 2024-04-18T15:49:53,183 66 | double t3,t4; 2024-04-18T15:49:53,184 | ^~ 2024-04-18T15:49:53,212 build/temp.linux-armv7l-cpython-39/Jess.c: In function ‘JessQuery_next’: 2024-04-18T15:49:53,213 build/temp.linux-armv7l-cpython-39/Jess.c:180:12: warning: variable ‘T’ set but not used [-Wunused-but-set-variable] 2024-04-18T15:49:53,213 180 | Template *T; 2024-04-18T15:49:53,214 | ^ 2024-04-18T15:49:53,299 generating build/temp.linux-armv7l-cpython-39/KdTree.o from build/temp.linux-armv7l-cpython-39/KdTree.c 2024-04-18T15:49:53,300 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/KdTree.c -o build/temp.linux-armv7l-cpython-39/KdTree.o 2024-04-18T15:49:53,325 generating build/temp.linux-armv7l-cpython-39/Molecule.o from build/temp.linux-armv7l-cpython-39/Molecule.c 2024-04-18T15:49:53,326 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Molecule.c -o build/temp.linux-armv7l-cpython-39/Molecule.o 2024-04-18T15:49:53,327 generating build/temp.linux-armv7l-cpython-39/Region.o from build/temp.linux-armv7l-cpython-39/Region.c 2024-04-18T15:49:53,327 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Region.c -o build/temp.linux-armv7l-cpython-39/Region.o 2024-04-18T15:49:53,384 generating build/temp.linux-armv7l-cpython-39/Scanner.o from build/temp.linux-armv7l-cpython-39/Scanner.c 2024-04-18T15:49:53,385 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Scanner.c -o build/temp.linux-armv7l-cpython-39/Scanner.o 2024-04-18T15:49:53,422 build/temp.linux-armv7l-cpython-39/KdTree.c: In function ‘KdTree_create’: 2024-04-18T15:49:53,423 build/temp.linux-armv7l-cpython-39/KdTree.c:125:8: warning: unused variable ‘j’ [-Wunused-variable] 2024-04-18T15:49:53,423 125 | int i,j; 2024-04-18T15:49:53,423 | ^ 2024-04-18T15:49:53,424 build/temp.linux-armv7l-cpython-39/KdTree.c: In function ‘KdTree_free’: 2024-04-18T15:49:53,425 build/temp.linux-armv7l-cpython-39/KdTree.c:154:6: warning: unused variable ‘i’ [-Wunused-variable] 2024-04-18T15:49:53,425 154 | int i; 2024-04-18T15:49:53,425 | ^ 2024-04-18T15:49:53,433 At top level: 2024-04-18T15:49:53,433 build/temp.linux-armv7l-cpython-39/KdTree.c:108:12: warning: ‘imin’ defined but not used [-Wunused-function] 2024-04-18T15:49:53,434 108 | static int imin(int x, int y) 2024-04-18T15:49:53,434 | ^~~~ 2024-04-18T15:49:53,511 build/temp.linux-armv7l-cpython-39/Scanner.c: In function ‘Scanner_create’: 2024-04-18T15:49:53,511 build/temp.linux-armv7l-cpython-39/Scanner.c:82:6: warning: unused variable ‘m’ [-Wunused-variable] 2024-04-18T15:49:53,511 82 | int m; 2024-04-18T15:49:53,512 | ^ 2024-04-18T15:49:53,541 generating build/temp.linux-armv7l-cpython-39/Super.o from build/temp.linux-armv7l-cpython-39/Super.c 2024-04-18T15:49:53,542 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/Super.c -o build/temp.linux-armv7l-cpython-39/Super.o 2024-04-18T15:49:53,610 generating build/temp.linux-armv7l-cpython-39/TessAtom.o from build/temp.linux-armv7l-cpython-39/TessAtom.c 2024-04-18T15:49:53,611 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/TessAtom.c -o build/temp.linux-armv7l-cpython-39/TessAtom.o 2024-04-18T15:49:53,736 build/temp.linux-armv7l-cpython-39/Super.c: In function ‘Superposition_compute’: 2024-04-18T15:49:53,737 build/temp.linux-armv7l-cpython-39/Super.c:146:13: warning: unused variable ‘tst’ [-Wunused-variable] 2024-04-18T15:49:53,737 146 | double tmp,tst; 2024-04-18T15:49:53,737 | ^~~ 2024-04-18T15:49:53,738 build/temp.linux-armv7l-cpython-39/Super.c:146:9: warning: unused variable ‘tmp’ [-Wunused-variable] 2024-04-18T15:49:53,738 146 | double tmp,tst; 2024-04-18T15:49:53,738 | ^~~ 2024-04-18T15:49:53,738 build/temp.linux-armv7l-cpython-39/Super.c:143:9: warning: unused variable ‘v’ [-Wunused-variable] 2024-04-18T15:49:53,738 143 | double v[3]; 2024-04-18T15:49:53,739 | ^ 2024-04-18T15:49:53,742 build/temp.linux-armv7l-cpython-39/Super.c: In function ‘superpose’: 2024-04-18T15:49:53,742 build/temp.linux-armv7l-cpython-39/Super.c:412:9: warning: unused variable ‘Q’ [-Wunused-variable] 2024-04-18T15:49:53,742 412 | double Q[9]; 2024-04-18T15:49:53,743 | ^ 2024-04-18T15:49:53,768 generating build/temp.linux-armv7l-cpython-39/TessTemplate.o from build/temp.linux-armv7l-cpython-39/TessTemplate.c 2024-04-18T15:49:53,769 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Ivendor/jess -Ibuild/temp.linux-armv7l-cpython-39 -c build/temp.linux-armv7l-cpython-39/TessTemplate.c -o build/temp.linux-armv7l-cpython-39/TessTemplate.o 2024-04-18T15:49:53,809 build/temp.linux-armv7l-cpython-39/TessAtom.c: In function ‘TessAtom_create’: 2024-04-18T15:49:53,809 build/temp.linux-armv7l-cpython-39/TessAtom.c:152:3: warning: assignment to ‘char *’ from incompatible pointer type ‘TessAtom *’ {aka ‘struct _TessAtom *’} [-Wincompatible-pointer-types] 2024-04-18T15:49:53,810 152 | p=&A[1]; 2024-04-18T15:49:53,810 | ^ 2024-04-18T15:49:53,810 build/temp.linux-armv7l-cpython-39/TessAtom.c:153:9: warning: assignment to ‘char **’ from incompatible pointer type ‘char *’ [-Wincompatible-pointer-types] 2024-04-18T15:49:53,810 153 | A->name=p; 2024-04-18T15:49:53,810 | ^ 2024-04-18T15:49:53,811 build/temp.linux-armv7l-cpython-39/TessAtom.c:161:12: warning: assignment to ‘char **’ from incompatible pointer type ‘char *’ [-Wincompatible-pointer-types] 2024-04-18T15:49:53,811 161 | A->resName=p; 2024-04-18T15:49:53,811 | ^ 2024-04-18T15:49:53,812 build/temp.linux-armv7l-cpython-39/TessAtom.c: In function ‘TessAtom_copy’: 2024-04-18T15:49:53,812 build/temp.linux-armv7l-cpython-39/TessAtom.c:276:3: warning: assignment to ‘char *’ from incompatible pointer type ‘TessAtom *’ {aka ‘struct _TessAtom *’} [-Wincompatible-pointer-types] 2024-04-18T15:49:53,812 276 | p=&B[1]; 2024-04-18T15:49:53,812 | ^ 2024-04-18T15:49:53,813 build/temp.linux-armv7l-cpython-39/TessAtom.c:277:9: warning: assignment to ‘char **’ from incompatible pointer type ‘char *’ [-Wincompatible-pointer-types] 2024-04-18T15:49:53,813 277 | B->name=p; 2024-04-18T15:49:53,813 | ^ 2024-04-18T15:49:53,813 build/temp.linux-armv7l-cpython-39/TessAtom.c:285:12: warning: assignment to ‘char **’ from incompatible pointer type ‘char *’ [-Wincompatible-pointer-types] 2024-04-18T15:49:53,814 285 | B->resName=p; 2024-04-18T15:49:53,814 | ^ 2024-04-18T15:49:53,908 build/temp.linux-armv7l-cpython-39/TessTemplate.c: In function ‘TessTemplate_check’: 2024-04-18T15:49:53,909 build/temp.linux-armv7l-cpython-39/TessTemplate.c:85:16: warning: unused variable ‘f’ [-Wunused-variable] 2024-04-18T15:49:53,909 85 | int a,b,c,d,e,f; 2024-04-18T15:49:53,909 | ^ 2024-04-18T15:49:53,910 build/temp.linux-armv7l-cpython-39/TessTemplate.c:85:14: warning: unused variable ‘e’ [-Wunused-variable] 2024-04-18T15:49:53,910 85 | int a,b,c,d,e,f; 2024-04-18T15:49:53,910 | ^ 2024-04-18T15:49:53,956 build/temp.linux-armv7l-cpython-39/TessAtom.c: In function ‘TessAtom_create’: 2024-04-18T15:49:53,956 build/temp.linux-armv7l-cpython-39/TessAtom.c:172:2: warning: ‘strncpy’ output may be truncated copying 4 bytes from a string of length 4 [-Wstringop-truncation] 2024-04-18T15:49:53,956 172 | strncpy(A->name[0],a.name,4); 2024-04-18T15:49:53,957 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-04-18T15:49:53,957 build/temp.linux-armv7l-cpython-39/TessAtom.c:173:2: warning: ‘strncpy’ output may be truncated copying 3 bytes from a string of length 3 [-Wstringop-truncation] 2024-04-18T15:49:53,957 173 | strncpy(A->resName[0],a.resName,3); 2024-04-18T15:49:53,958 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-04-18T15:49:54,438 generating build/temp.linux-armv7l-cpython-39/libjess.a from build/temp.linux-armv7l-cpython-39/Annulus.o, build/temp.linux-armv7l-cpython-39/Atom.o, build/temp.linux-armv7l-cpython-39/Jess.o, build/temp.linux-armv7l-cpython-39/Join.o, build/temp.linux-armv7l-cpython-39/KdTree.o, build/temp.linux-armv7l-cpython-39/Molecule.o, build/temp.linux-armv7l-cpython-39/Region.o, build/temp.linux-armv7l-cpython-39/Scanner.o, build/temp.linux-armv7l-cpython-39/Super.o, build/temp.linux-armv7l-cpython-39/TessAtom.o, build/temp.linux-armv7l-cpython-39/TessTemplate.o 2024-04-18T15:49:54,439 arm-linux-gnueabihf-gcc-ar rcs build/temp.linux-armv7l-cpython-39/libjess.a build/temp.linux-armv7l-cpython-39/Annulus.o build/temp.linux-armv7l-cpython-39/Atom.o build/temp.linux-armv7l-cpython-39/Jess.o build/temp.linux-armv7l-cpython-39/Join.o build/temp.linux-armv7l-cpython-39/KdTree.o build/temp.linux-armv7l-cpython-39/Molecule.o build/temp.linux-armv7l-cpython-39/Region.o build/temp.linux-armv7l-cpython-39/Scanner.o build/temp.linux-armv7l-cpython-39/Super.o build/temp.linux-armv7l-cpython-39/TessAtom.o build/temp.linux-armv7l-cpython-39/TessTemplate.o 2024-04-18T15:49:54,472 running build_ext 2024-04-18T15:49:57,767 Compiling pyjess/_jess.pyx because it changed. 2024-04-18T15:49:57,767 [1/1] Cythonizing pyjess/_jess.pyx 2024-04-18T15:49:57,768 building pyjess._jess with unix compiler for platform linux-armv7l 2024-04-18T15:49:57,768 checking whether `PyInterpreterState_GetID` is available 2024-04-18T15:49:57,770 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c build/temp.linux-armv7l-cpython-39/have_getid.c -o build/temp.linux-armv7l-cpython-39/have_getid.o -Werror=implicit-function-declaration 2024-04-18T15:49:58,063 yes 2024-04-18T15:49:58,071 building 'pyjess._jess' extension 2024-04-18T15:49:58,072 creating build/temp.linux-armv7l-cpython-39/pyjess 2024-04-18T15:49:58,073 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -DCYTHON_WITHOUT_ASSERTIONS=1 -DHAS_PYINTERPRETERSTATE_GETID=1 -Ipyjess -Iinclude -Ibuild/temp.linux-armv7l-cpython-39 -I/usr/include/python3.9 -c pyjess/_jess.c -o build/temp.linux-armv7l-cpython-39/pyjess/_jess.o 2024-04-18T15:49:58,459 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_8Molecule_10__len__’: 2024-04-18T15:49:58,462 pyjess/_jess.c:5848:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,462 5848 | int __pyx_t_1; 2024-04-18T15:49:58,462 | ^~~~~~~~~ 2024-04-18T15:49:58,469 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_8Molecule_14__sizeof__’: 2024-04-18T15:49:58,472 pyjess/_jess.c:6207:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,472 6207 | int __pyx_t_1; 2024-04-18T15:49:58,472 | ^~~~~~~~~ 2024-04-18T15:49:58,577 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_6serial___get__’: 2024-04-18T15:49:58,582 pyjess/_jess.c:9304:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,582 9304 | int __pyx_t_1; 2024-04-18T15:49:58,582 | ^~~~~~~~~ 2024-04-18T15:49:58,584 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_6altloc___get__’: 2024-04-18T15:49:58,588 pyjess/_jess.c:9394:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,589 9394 | int __pyx_t_1; 2024-04-18T15:49:58,589 | ^~~~~~~~~ 2024-04-18T15:49:58,591 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_4name___get__’: 2024-04-18T15:49:58,596 pyjess/_jess.c:9489:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,596 9489 | int __pyx_t_1; 2024-04-18T15:49:58,596 | ^~~~~~~~~ 2024-04-18T15:49:58,599 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_12residue_name___get__’: 2024-04-18T15:49:58,603 pyjess/_jess.c:9609:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,603 9609 | int __pyx_t_1; 2024-04-18T15:49:58,604 | ^~~~~~~~~ 2024-04-18T15:49:58,605 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_14residue_number___get__’: 2024-04-18T15:49:58,610 pyjess/_jess.c:9729:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,610 9729 | int __pyx_t_1; 2024-04-18T15:49:58,610 | ^~~~~~~~~ 2024-04-18T15:49:58,613 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_7segment___get__’: 2024-04-18T15:49:58,617 pyjess/_jess.c:9819:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,618 9819 | int __pyx_t_1; 2024-04-18T15:49:58,618 | ^~~~~~~~~ 2024-04-18T15:49:58,620 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_7element___get__’: 2024-04-18T15:49:58,625 pyjess/_jess.c:9939:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,625 9939 | int __pyx_t_1; 2024-04-18T15:49:58,625 | ^~~~~~~~~ 2024-04-18T15:49:58,627 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_14insertion_code___get__’: 2024-04-18T15:49:58,632 pyjess/_jess.c:10059:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,632 10059 | int __pyx_t_1; 2024-04-18T15:49:58,632 | ^~~~~~~~~ 2024-04-18T15:49:58,636 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_8chain_id___get__’: 2024-04-18T15:49:58,641 pyjess/_jess.c:10154:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,641 10154 | int __pyx_t_1; 2024-04-18T15:49:58,641 | ^~~~~~~~~ 2024-04-18T15:49:58,643 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_9occupancy___get__’: 2024-04-18T15:49:58,648 pyjess/_jess.c:10314:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,648 10314 | int __pyx_t_1; 2024-04-18T15:49:58,648 | ^~~~~~~~~ 2024-04-18T15:49:58,650 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_18temperature_factor___get__’: 2024-04-18T15:49:58,655 pyjess/_jess.c:10404:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,655 10404 | int __pyx_t_1; 2024-04-18T15:49:58,655 | ^~~~~~~~~ 2024-04-18T15:49:58,657 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_6charge___get__’: 2024-04-18T15:49:58,662 pyjess/_jess.c:10494:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,662 10494 | int __pyx_t_1; 2024-04-18T15:49:58,662 | ^~~~~~~~~ 2024-04-18T15:49:58,664 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_1x___get__’: 2024-04-18T15:49:58,669 pyjess/_jess.c:10584:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,669 10584 | int __pyx_t_1; 2024-04-18T15:49:58,669 | ^~~~~~~~~ 2024-04-18T15:49:58,671 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_1y___get__’: 2024-04-18T15:49:58,676 pyjess/_jess.c:10674:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,676 10674 | int __pyx_t_1; 2024-04-18T15:49:58,676 | ^~~~~~~~~ 2024-04-18T15:49:58,678 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_4Atom_1z___get__’: 2024-04-18T15:49:58,683 pyjess/_jess.c:10764:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,683 10764 | int __pyx_t_1; 2024-04-18T15:49:58,684 | ^~~~~~~~~ 2024-04-18T15:49:58,781 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_12TemplateAtom_10match_mode___get__’: 2024-04-18T15:49:58,787 pyjess/_jess.c:13455:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,788 13455 | int __pyx_t_1; 2024-04-18T15:49:58,788 | ^~~~~~~~~ 2024-04-18T15:49:58,789 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_12TemplateAtom_14residue_number___get__’: 2024-04-18T15:49:58,796 pyjess/_jess.c:13545:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,796 13545 | int __pyx_t_1; 2024-04-18T15:49:58,796 | ^~~~~~~~~ 2024-04-18T15:49:58,800 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_12TemplateAtom_8chain_id___get__’: 2024-04-18T15:49:58,807 pyjess/_jess.c:13637:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,807 13637 | int __pyx_t_1; 2024-04-18T15:49:58,807 | ^~~~~~~~~ 2024-04-18T15:49:58,809 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_12TemplateAtom_1x___get__’: 2024-04-18T15:49:58,816 pyjess/_jess.c:13817:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,816 13817 | int __pyx_t_1; 2024-04-18T15:49:58,816 | ^~~~~~~~~ 2024-04-18T15:49:58,818 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_12TemplateAtom_1y___get__’: 2024-04-18T15:49:58,824 pyjess/_jess.c:13907:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,824 13907 | int __pyx_t_1; 2024-04-18T15:49:58,825 | ^~~~~~~~~ 2024-04-18T15:49:58,826 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_12TemplateAtom_1z___get__’: 2024-04-18T15:49:58,833 pyjess/_jess.c:13997:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,833 13997 | int __pyx_t_1; 2024-04-18T15:49:58,833 | ^~~~~~~~~ 2024-04-18T15:49:58,837 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_12TemplateAtom_10atom_names___get__’: 2024-04-18T15:49:58,843 pyjess/_jess.c:14089:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,844 14089 | int __pyx_t_1; 2024-04-18T15:49:58,844 | ^~~~~~~~~ 2024-04-18T15:49:58,849 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_12TemplateAtom_13residue_names___get__’: 2024-04-18T15:49:58,856 pyjess/_jess.c:14260:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,856 14260 | int __pyx_t_1; 2024-04-18T15:49:58,857 | ^~~~~~~~~ 2024-04-18T15:49:58,858 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_12TemplateAtom_15distance_weight___get__’: 2024-04-18T15:49:58,865 pyjess/_jess.c:14429:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,865 14429 | int __pyx_t_1; 2024-04-18T15:49:58,865 | ^~~~~~~~~ 2024-04-18T15:49:58,912 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_8Template_10__len__’: 2024-04-18T15:49:58,920 pyjess/_jess.c:16254:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,920 16254 | int __pyx_t_1; 2024-04-18T15:49:58,920 | ^~~~~~~~~ 2024-04-18T15:49:58,929 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_8Template_14__sizeof__’: 2024-04-18T15:49:58,937 pyjess/_jess.c:16681:33: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare] 2024-04-18T15:49:58,938 16681 | for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { 2024-04-18T15:49:58,938 | ^ 2024-04-18T15:49:58,948 pyjess/_jess.c:16618:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,949 16618 | int __pyx_t_1; 2024-04-18T15:49:58,949 | ^~~~~~~~~ 2024-04-18T15:49:58,953 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_8Template_9dimension___get__’: 2024-04-18T15:49:58,961 pyjess/_jess.c:16924:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:58,962 16924 | int __pyx_t_1; 2024-04-18T15:49:58,962 | ^~~~~~~~~ 2024-04-18T15:49:59,013 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_3Hit_11determinant___get__’: 2024-04-18T15:49:59,022 pyjess/_jess.c:18338:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:59,022 18338 | int __pyx_t_1; 2024-04-18T15:49:59,023 | ^~~~~~~~~ 2024-04-18T15:49:59,024 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_3Hit_10log_evalue___get__’: 2024-04-18T15:49:59,033 pyjess/_jess.c:18479:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:59,034 18479 | int __pyx_t_1; 2024-04-18T15:49:59,034 | ^~~~~~~~~ 2024-04-18T15:49:59,036 pyjess/_jess.c: In function ‘__pyx_pf_6pyjess_5_jess_3Hit_6evalue___get__’: 2024-04-18T15:49:59,045 pyjess/_jess.c:18580:7: warning: unused variable ‘__pyx_t_1’ [-Wunused-variable] 2024-04-18T15:49:59,046 18580 | int __pyx_t_1; 2024-04-18T15:49:59,046 | ^~~~~~~~~ 2024-04-18T15:49:59,054 pyjess/_jess.c: In function ‘__pyx_f_6pyjess_5_jess_3Hit_atoms’: 2024-04-18T15:49:59,063 pyjess/_jess.c:18688:7: warning: unused variable ‘__pyx_t_7’ [-Wunused-variable] 2024-04-18T15:49:59,063 18688 | int __pyx_t_7; 2024-04-18T15:49:59,063 | ^~~~~~~~~ 2024-04-18T15:50:26,852 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/pyjess/_jess.o build/temp.linux-armv7l-cpython-39/libjess.a -L/usr/lib -Lbuild/temp.linux-armv7l-cpython-39 -ljess -ljess -o build/lib.linux-armv7l-cpython-39/pyjess/_jess.cpython-39-arm-linux-gnueabihf.so 2024-04-18T15:50:27,066 installing to build/bdist.linux-armv7l/wheel 2024-04-18T15:50:27,067 running install 2024-04-18T15:50:27,093 running install_lib 2024-04-18T15:50:27,101 creating build/bdist.linux-armv7l 2024-04-18T15:50:27,102 creating build/bdist.linux-armv7l/wheel 2024-04-18T15:50:27,104 creating build/bdist.linux-armv7l/wheel/pyjess 2024-04-18T15:50:27,106 creating build/bdist.linux-armv7l/wheel/pyjess/tests 2024-04-18T15:50:27,107 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/test_template_atom.py -> build/bdist.linux-armv7l/wheel/pyjess/tests 2024-04-18T15:50:27,109 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/test_template.py -> build/bdist.linux-armv7l/wheel/pyjess/tests 2024-04-18T15:50:27,113 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/__init__.py -> build/bdist.linux-armv7l/wheel/pyjess/tests 2024-04-18T15:50:27,115 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/test_jess.py -> build/bdist.linux-armv7l/wheel/pyjess/tests 2024-04-18T15:50:27,118 creating build/bdist.linux-armv7l/wheel/pyjess/tests/data 2024-04-18T15:50:27,119 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/data/1.3.3.tpl -> build/bdist.linux-armv7l/wheel/pyjess/tests/data 2024-04-18T15:50:27,121 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/data/1AMY+1.3.3.txt -> build/bdist.linux-armv7l/wheel/pyjess/tests/data 2024-04-18T15:50:27,126 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/data/__init__.py -> build/bdist.linux-armv7l/wheel/pyjess/tests/data 2024-04-18T15:50:27,127 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/data/1AMY.pdb -> build/bdist.linux-armv7l/wheel/pyjess/tests/data 2024-04-18T15:50:27,135 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/data/template_01.qry -> build/bdist.linux-armv7l/wheel/pyjess/tests/data 2024-04-18T15:50:27,137 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/data/pdb1lnb.pdb -> build/bdist.linux-armv7l/wheel/pyjess/tests/data 2024-04-18T15:50:27,144 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/data/template_02.qry -> build/bdist.linux-armv7l/wheel/pyjess/tests/data 2024-04-18T15:50:27,146 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/utils.py -> build/bdist.linux-armv7l/wheel/pyjess/tests 2024-04-18T15:50:27,148 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/test_atom.py -> build/bdist.linux-armv7l/wheel/pyjess/tests 2024-04-18T15:50:27,150 copying build/lib.linux-armv7l-cpython-39/pyjess/tests/test_molecule.py -> build/bdist.linux-armv7l/wheel/pyjess/tests 2024-04-18T15:50:27,151 copying build/lib.linux-armv7l-cpython-39/pyjess/__init__.py -> build/bdist.linux-armv7l/wheel/pyjess 2024-04-18T15:50:27,153 copying build/lib.linux-armv7l-cpython-39/pyjess/py.typed -> build/bdist.linux-armv7l/wheel/pyjess 2024-04-18T15:50:27,155 copying build/lib.linux-armv7l-cpython-39/pyjess/_jess.pyi -> build/bdist.linux-armv7l/wheel/pyjess 2024-04-18T15:50:27,157 copying build/lib.linux-armv7l-cpython-39/pyjess/_jess.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/pyjess 2024-04-18T15:50:27,179 running install_egg_info 2024-04-18T15:50:27,191 running egg_info 2024-04-18T15:50:27,196 writing pyjess.egg-info/PKG-INFO 2024-04-18T15:50:27,200 writing dependency_links to pyjess.egg-info/dependency_links.txt 2024-04-18T15:50:27,203 writing top-level names to pyjess.egg-info/top_level.txt 2024-04-18T15:50:27,220 reading manifest file 'pyjess.egg-info/SOURCES.txt' 2024-04-18T15:50:27,228 reading manifest template 'MANIFEST.in' 2024-04-18T15:50:27,260 warning: no files found matching '*.pxi' under directory 'pyjess' 2024-04-18T15:50:27,274 warning: no files found matching '*.pxd' under directory 'pyjess' 2024-04-18T15:50:27,282 warning: no files found matching '*.h' under directory 'pyjess' 2024-04-18T15:50:27,299 warning: no files found matching 'LICENSE' under directory 'vendor/jess' 2024-04-18T15:50:27,305 warning: no files found matching 'AUTHORS' under directory 'vendor/jess' 2024-04-18T15:50:27,310 warning: no files found matching 'CHANGELOG' under directory 'vendor/jess' 2024-04-18T15:50:27,330 no previously-included directories found matching 'vendor/sword/vendor' 2024-04-18T15:50:27,351 warning: no files found matching '*.pxi' under directory 'pyjess' 2024-04-18T15:50:27,366 warning: no files found matching '*.pxd' under directory 'pyjess' 2024-04-18T15:50:27,373 warning: no files found matching '*.h' under directory 'pyjess' 2024-04-18T15:50:27,378 warning: no previously-included files matching '*.cpp' found under directory 'pyjess' 2024-04-18T15:50:27,379 warning: no previously-included files matching '*.html' found under directory 'pyjess' 2024-04-18T15:50:27,380 adding license file 'COPYING' 2024-04-18T15:50:27,386 writing manifest file 'pyjess.egg-info/SOURCES.txt' 2024-04-18T15:50:27,388 Copying pyjess.egg-info to build/bdist.linux-armv7l/wheel/pyjess-0.1.0-py3.9.egg-info 2024-04-18T15:50:27,397 running install_scripts 2024-04-18T15:50:27,445 creating build/bdist.linux-armv7l/wheel/pyjess-0.1.0.dist-info/WHEEL 2024-04-18T15:50:27,448 creating '/tmp/pip-wheel-roev3yex/.tmp-0ft9zi1n/pyjess-0.1.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-18T15:50:27,450 adding 'pyjess/__init__.py' 2024-04-18T15:50:27,715 adding 'pyjess/_jess.cpython-39-arm-linux-gnueabihf.so' 2024-04-18T15:50:27,725 adding 'pyjess/_jess.pyi' 2024-04-18T15:50:27,727 adding 'pyjess/py.typed' 2024-04-18T15:50:27,729 adding 'pyjess/tests/__init__.py' 2024-04-18T15:50:27,731 adding 'pyjess/tests/test_atom.py' 2024-04-18T15:50:27,732 adding 'pyjess/tests/test_jess.py' 2024-04-18T15:50:27,734 adding 'pyjess/tests/test_molecule.py' 2024-04-18T15:50:27,735 adding 'pyjess/tests/test_template.py' 2024-04-18T15:50:27,737 adding 'pyjess/tests/test_template_atom.py' 2024-04-18T15:50:27,738 adding 'pyjess/tests/utils.py' 2024-04-18T15:50:27,740 adding 'pyjess/tests/data/1.3.3.tpl' 2024-04-18T15:50:27,753 adding 'pyjess/tests/data/1AMY+1.3.3.txt' 2024-04-18T15:50:27,807 adding 'pyjess/tests/data/1AMY.pdb' 2024-04-18T15:50:27,810 adding 'pyjess/tests/data/__init__.py' 2024-04-18T15:50:27,854 adding 'pyjess/tests/data/pdb1lnb.pdb' 2024-04-18T15:50:27,857 adding 'pyjess/tests/data/template_01.qry' 2024-04-18T15:50:27,859 adding 'pyjess/tests/data/template_02.qry' 2024-04-18T15:50:27,861 adding 'pyjess-0.1.0.dist-info/COPYING' 2024-04-18T15:50:27,863 adding 'pyjess-0.1.0.dist-info/METADATA' 2024-04-18T15:50:27,864 adding 'pyjess-0.1.0.dist-info/WHEEL' 2024-04-18T15:50:27,866 adding 'pyjess-0.1.0.dist-info/top_level.txt' 2024-04-18T15:50:27,867 adding 'pyjess-0.1.0.dist-info/RECORD' 2024-04-18T15:50:27,876 removing build/bdist.linux-armv7l/wheel 2024-04-18T15:50:28,161 Building wheel for pyjess (pyproject.toml): finished with status 'done' 2024-04-18T15:50:28,202 Created wheel for pyjess: filename=pyjess-0.1.0-cp39-cp39-linux_armv7l.whl size=669063 sha256=7b40916b8bd3ea61ed8dbb6a4618b9d67b3691d69e88bb9f633600b8d24a6e9c 2024-04-18T15:50:28,203 Stored in directory: /tmp/pip-ephem-wheel-cache-977t7u1l/wheels/96/ce/2e/c159eec1b674bc3b5640fc518863749c3f9d62a1fb00e9a536 2024-04-18T15:50:28,215 Successfully built pyjess 2024-04-18T15:50:28,243 Removed build tracker: '/tmp/pip-build-tracker-i16pxs93'